LOCUS       DATGWW010000001         1624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_97, whole genome
            shotgun sequence.
ACCESSION   DATGWW010000001 DATGWW010000000
VERSION     DATGWW010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..774
                     /locus_tag="VK150_00005"
     CDS             <1..774
                     /locus_tag="VK150_00005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29708.1"
                     /translation="DANPLATWGRANGRRILPIPVEVGGRFSAFTPIGTLPLAWMGRD
                     AAAFAQGGRDVIAQLDSDQGAWRDRIAATVALLLDAHRRGVTEWVLMPYATRLDSLSA
                     WWVQLVAESLGKVARDGTRKGYTPIRAVGPVDQHSQLQRWMAGPRNLGVIVMTVDGPA
                     TPERLDPPAGSPYPGLAGLQGADILQAQAEGTAGALEAAGVPVLRWSMPTLSERELGA
                     FMMAWQAIIGLLGIALDLDPFDQPEVEDGKKRTFQRLGL"
     gene            880..>1624
                     /locus_tag="VK150_00010"
     CDS             880..>1624
                     /locus_tag="VK150_00010"
                     /inference="COORDINATES: protein motif:HMM:NF012392.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HLP29709.1"
                     /translation="MAETAGDPIRFRTLHASPVIQVRAFQCAACKGGPGPEEASEENT
                     LVLMRHGAFCRHFGRRRVTADVNQAAFFGKGSAYRVSHPGDHGDRGTVFQVPQRILQE
                     FLREWDPALEEQAGLPFPGGPCESGVFWRHRELVRTLESGVALEPFWADVTALQIYAD
                     VLGAGFLREGRPARSRKADTAEDHHDLAEAGRLYFAEHLGERLTLDEVARALNTSPFH
                     FARIFQHSTGLPIHRYLTQLRLRASLDRLA"
BASE COUNT          220 a          598 c          578 g          228 t
ORIGIN      
        1 gacgccaacc cgctggccac ctggggccgc gccaacgggc gccgcatcct gcccattccg
       61 gtggaggtcg gcgggcgctt ctcggcgttc acgcccatcg gcacgctccc cctggcctgg
      121 atgggccggg atgcggcggc cttcgcccag ggcggccgcg acgtcatcgc ccagctcgat
      181 tcggatcagg gcgcctggcg cgaccgcatc gccgccacgg tggcgctgct gctggacgcc
      241 catcggcgcg gcgtcaccga gtgggtgctg atgccctacg ccacgcggct ggacagcctc
      301 tcggcctggt gggtgcagct ggtggcggaa tccctcggca aggtggcccg ggacggcact
      361 cggaagggct acacccccat ccgcgccgtg gggcccgtgg accagcacag ccagctgcag
      421 cgctggatgg cgggcccgag gaatctcggc gtgatcgtga tgaccgtgga cggccccgcg
      481 acgcccgagc gcctggaccc gccggcggga tcgccctatc cgggcctcgc cggcctgcaa
      541 ggcgccgaca tcctccaggc ccaggcggaa gggacggccg gggccctgga agccgccggc
      601 gtgcccgtcc tgcgctggtc catgcccacc ctgagcgaac gggagctggg cgccttcatg
      661 atggcctggc aggccatcat cggcctgctg ggcatcgccc tggacctgga ccccttcgac
      721 cagcccgagg tcgaggacgg gaagaagcga accttccaac ggctggggtt gtagccatct
      781 ccacggtcag cgacggctgg ccccgggggc gttggcgccg gcgcgctggc tcaccatact
      841 tggagggcgc ctgactgggc cgagggaagg ggggatcaca tggccgagac cgccggggat
      901 cccatccgct tccggaccct ccacgccagc ccggtcatcc aggtgcgcgc gttccagtgc
      961 gcggcttgca agggcggccc cgggcccgag gaggcctcgg aggagaacac cctcgtgctc
     1021 atgcgccacg gcgccttctg ccggcacttc ggccggcgcc gcgtcaccgc ggatgtgaac
     1081 caggccgcct tcttcggcaa gggcagcgcg taccgggtga gccacccggg cgaccatggc
     1141 gaccgcggca cggtgttcca ggtgccccag cgcatcctgc aggaattcct ccgggaatgg
     1201 gaccccgctt tggaggagca ggccggcctc ccgttccccg ggggcccctg cgaatccggc
     1261 gtgttctggc gccaccggga actggtcagg accctcgaat ccggtgtggc gctggagccc
     1321 ttctgggcgg atgtgacggc cctccagatc tatgcggatg tcctgggggc ggggttcctc
     1381 cgggagggcc ggccggcccg cagccgcaag gccgacaccg ctgaggacca ccatgatttg
     1441 gccgaggccg gccggctcta cttcgccgag cacctggggg agcgcctcac gctggacgaa
     1501 gtcgcccggg cgctgaacac ctccccattc catttcgccc gcatcttcca gcacagcacc
     1561 ggcctgccga tccaccggta cctcacccag ctgcggctga gggcctccct ggaccggctg
     1621 gcgg
//
LOCUS       DATGWW010000002         2843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_135920, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000002 DATGWW010000000
VERSION     DATGWW010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2843
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135920"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..325
                     /locus_tag="VK150_00015"
     CDS             <1..325
                     /locus_tag="VK150_00015"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HLP29710.1"
                     /translation="PLTNFFRITMPLILKPLTPLLISSFAFNFNNFVLISLLTGGLPD
                     FLNTSVPAGTTDILVSYTYRMAFQDSGQKFGLGAAISTVVFLMVAVISIIQIRSTRIA
                     EDAKR"
     gene            336..1226
                     /gene="malG"
                     /locus_tag="VK150_00020"
     CDS             336..1226
                     /gene="malG"
                     /locus_tag="VK150_00020"
                     /EC_number="7.5.2.1"
                     /inference="COORDINATES: protein motif:HMM:NF008231.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalG"
                     /protein_id="HLP29711.1"
                     /translation="MAIVIDKSQRWRVIAAHVFLILLCALVLFPVLMTISISLRPGNF
                     ATGSLIPKTISLEHWRFALGLPVTNADGVVITPDLPVLRWLWNSVKVASLSAVVAVLL
                     STTAAYAFARLKFAGKKASLMGLMLMQMFPTVLALIAIHSIFSRLGHTFPLFGIDSPW
                     ALVLSYSGGIALHIWTIKGFYETIPGEIEEAATVDGATPWQAFWRVLLPMSLPILMVI
                     FLLAFIWAVNEYPVASILLRSQDQLTIAVGSKQFLYAQKYLWGDFAAAAILSGLPISI
                     VFILAQRWMISGLTSGANKG"
     gene            1282..1713
                     /locus_tag="VK150_00025"
     CDS             1282..1713
                     /locus_tag="VK150_00025"
                     /inference="COORDINATES: protein motif:HMM:NF015659.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pullulanase-associated domain-containing
                     protein"
                     /protein_id="HLP29712.1"
                     /translation="MSLRTTFLKAIAVMALALTPALAAPPDGKIEINYHRCDGNYAKW
                     GVHLWKSPNMPLPDIEWPNPMMPTGKNDFGVFWHADLEEFKTGSKAQVNYIIHKGDIK
                     EQGAKDMAFDGNAHKAIWVVNNDRTIYFSKEEALKDHVCKK"
     gene            1827..>2843
                     /locus_tag="VK150_00030"
     CDS             1827..>2843
                     /locus_tag="VK150_00030"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HLP29713.1"
                     /translation="MTSSPRFSAALIALLGLGQPAAAQAPVAVPGTFAENPIVYFVMT
                     DRFVNGDPSNDHSYGRQREKAPKDDAGTFHGGDLKGLTAKVKEGWFKALGVNALWITA
                     PYEQIHGWVQGGQKEFKHYAYHGYYALDYTVLDKNMGTPEDLRELVDTAHGQGIRVLF
                     DIVMNHPGYLDIQTAKDLKIDVLWPDWEKDANLLRNYHNYIDYNSFNFGDWWGRPWVR
                     AGLPGYIDGGRSDLTMQLAYLPDFRTESPEPVKLPAFFKVKGDTRAVDLPNTTVRGYL
                     IKWLTDWVREYGIDGFRADTVKHVEPEAWAALKVEAVKALAEFKAKNPTRKVDDAAFW
                     MVGEY"
BASE COUNT          506 a         1019 c          819 g          499 t
ORIGIN      
        1 gcccctcacc aacttcttca ggatcaccat gccgctgatc ctgaagccgc tcacgcccct
       61 cctgatctcc tccttcgcct tcaacttcaa caatttcgtg ctcatcagcc tgctcacggg
      121 tgggctgccg gacttcctga acacctcggt gcccgcgggc accacggaca tcctcgtgtc
      181 ctacacctac cgcatggcct tccaggattc cgggcagaag ttcggtctcg gcgcggccat
      241 ctccaccgtg gtgttcctca tggtggccgt gatctccatc atccagatcc ggtccacccg
      301 gatcgccgaa gacgccaagc gctgaaggag gggaagtggc cattgtcatc gacaaatccc
      361 agcgttggcg cgtcatcgcg gcccatgtgt tcctgatcct cctctgcgcc ctggtgctgt
      421 tcccggtgct gatgaccatc tcgatctcgc tccgtcccgg caacttcgcc acgggcagcc
      481 tgattccgaa aaccatcagc ctcgagcact ggcgcttcgc cctgggcctg ccggtgacca
      541 acgcggacgg cgtggtgatc acccccgacc tgcccgtgct gcgctggctg tggaactccg
      601 tgaaggtggc gtccctgtcg gcggtcgtgg ccgtgctgct ctccaccacg gcagcctacg
      661 ccttcgcccg cctcaagttc gccggcaaga aggcctcgct gatgggcctc atgctcatgc
      721 agatgttccc cacggtgctg gccctcatcg ccatccactc gatcttctcg cggctcggcc
      781 acaccttccc cctcttcggg atcgacagcc cctgggcgct ggtcctgtcc tactccggcg
      841 gcatcgcgct ccacatctgg acgatcaagg ggttctacga aaccatcccc ggcgagatcg
      901 aagaggcggc caccgtggac ggcgccacgc cctggcaggc cttctggcgg gtgctcctgc
      961 ccatgtctct gcccatcctg atggtcatct tcctgctggc cttcatttgg gcggtgaacg
     1021 aataccccgt ggcctccatc ctgctgcgca gccaggacca gctcaccatc gccgtgggct
     1081 cgaagcagtt cctctatgcc cagaaatacc tctggggcga cttcgccgcg gcggcgatcc
     1141 tttcgggcct gcccatttcc atcgtgttca tcctggccca gcgctggatg atctccggcc
     1201 tcacgtccgg cgccaacaag ggctgaatcc cttccccaac ccgagggccg aggccctccc
     1261 cttccccaca aggagtcacg catgagcctc cgcacgacct tcctcaaggc gatcgccgtg
     1321 atggccctgg ccctcacgcc cgccctcgcc gcgccccccg acggcaagat cgagatcaac
     1381 taccaccgct gcgacggcaa ctacgccaag tggggcgtgc acctctggaa gagccccaac
     1441 atgcccctgc ccgacatcga gtggcccaac cccatgatgc ccaccggcaa gaacgatttc
     1501 ggcgtgttct ggcatgccga cctggaggag ttcaagaccg gctccaaggc ccaggtgaac
     1561 tacatcatcc acaagggcga catcaaggag cagggcgcca aggacatggc cttcgacggc
     1621 aatgcccaca aggccatctg ggtggtgaac aatgaccgca ccatctactt ctccaaggaa
     1681 gaggccctga aggaccacgt ctgcaagaag taggctgacg ttcgccgggg ggcgcactgc
     1741 gcgcacatcc ccccatgcat ccctgcgcat gggtcgggcg aagcccggcc catgcttgcg
     1801 ccttcgttct ccggcgtgga gtttccatga cttcctcacc caggttttca gccgccttga
     1861 ttgccctgct gggtctgggc cagccagcgg ctgcccaggc ccccgtcgcg gtgcctggca
     1921 ccttcgccga gaaccccatc gtctacttcg tgatgacgga ccgcttcgtc aacggggatc
     1981 cctccaacga ccatagctac ggccggcagc gggaaaaggc gcccaaggac gatgcgggca
     2041 ccttccacgg cggcgacctc aagggactca cggccaaggt gaaggaaggc tggttcaagg
     2101 ccctgggggt gaacgccctg tggatcaccg cgccctacga gcagatccac ggctgggtgc
     2161 agggcgggca gaaggaattc aagcactacg cctaccacgg ctactacgcc ctggactaca
     2221 cggtgctcga caagaacatg ggcacgcccg aggatctccg cgaactggtg gacacggccc
     2281 acggccaggg catccgcgtt ctgttcgaca tcgtgatgaa ccaccccggc tacctggaca
     2341 tccagacggc caaggacctg aagatcgacg tactctggcc cgactgggag aaggacgcca
     2401 acctcctgcg gaactaccac aactacatcg actacaactc cttcaacttc ggcgactggt
     2461 ggggccggcc ctgggtgcgc gcgggccttc ccggctacat cgatggcggc cgcagcgacc
     2521 tcaccatgca gctggcctac ctgccggatt tccgaaccga gagccccgag cccgtgaagc
     2581 tcccggcctt cttcaaggtg aagggcgaca cccgcgcggt ggacctgccg aacaccaccg
     2641 tgcgcggcta cctcatcaag tggctcacgg attgggtgcg ggagtacggc atcgacgggt
     2701 tccgggcgga caccgtcaag cacgtggagc ccgaggcctg ggcggccctg aaggtcgaag
     2761 ccgtgaaggc cctggccgag ttcaaggcca agaaccccac gcggaaggtg gatgacgccg
     2821 ccttctggat ggtgggcgag tac
//
LOCUS       DATGWW010000003         2344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_271768, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000003 DATGWW010000000
VERSION     DATGWW010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271768"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VK150_00035"
     CDS             complement(<1..220)
                     /locus_tag="VK150_00035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29714.1"
                     /translation="MNPALDRTFKRASAGLMLALALVYLVHAAWHTAAAEVAVHPSGA
                     AVVMELDPFLLAQAQSGDGVAGCHFFCNH"
     gene            389..>2344
                     /locus_tag="VK150_00040"
     CDS             389..>2344
                     /locus_tag="VK150_00040"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HLP29715.1"
                     /translation="MNPRSLALPLLALALAGSSLRAEEGMWTFDNLPTKKIQAGYGWA
                     PDQAWLDHVRLSSLRFPGGSGSFVSKDGLVLTNHHVGRGWIQRVSSKEADYVQNGFAA
                     ATREQEIKVPGLELMTLMAMENITDRLAKAVKAGTPEKLALKQRETEIEKIKKEMQEK
                     SGLTCEHVTLYQGGEHWIYSYKKHTDVRLVFAPEQQIAFFGGDPDNFTFPRHNLDFSL
                     FRVYENGKPYQPKDFLHWTQTGLKAGDLTFVTGHPGRTNRQDTVAQMEFSADFAIPMR
                     LKAYERRKAAMVEYAKTSPEAARQVNTQIFGIENGIKATTGYWAGLKDKDAMARIRAA
                     EKDLRAKVAKDAKLTAEAGQSWAKIEAATKVAKDLAKDALNVGTANSTLLGYALGLVR
                     IADEEALPSEKRLPEYSDANLKTAKARMGVPAPFYKEQEVFMFTKGLEEAAKELGPQH
                     KFVKAMLGGKSPAEVAKAAVDGSKLNDPEARKALLAGGKKAIAESTDPMIALAKKLDP
                     ISRELRKKQEDQVASVITEHGTRIAKARFAVYGKNTYPDATFTLRLSYGAVAEYKANG
                     TLIQPFTTFGGLFDRYDGWGGNAIKAHHGAWTLPQRWVDKRGALDASLPFNFAHKVDI
                     IGGNSGSPVIDKKGELVGLIFDGNIESL"
BASE COUNT          472 a          828 c          721 g          323 t
ORIGIN      
        1 cgtggttgca gaagaagtgg caaccggcca cgccatcgcc gctctgggcc tgggcgagca
       61 ggaaaggatc aagttccatc accaccgcgg cgccgctggg gtggaccgcc acctcggccg
      121 cggcggtgtg ccacgcggcg tggaccaggt agaccagggc cagcgccagc atcaggccgg
      181 cggaggcgcg cttgaaagtc ctatccaggg cggggttcat ggaacgtcca gtcgtccatt
      241 ttatcggaat tcagccaggt atggccatgg aacctgctgg acagacagct gttggcttga
      301 agttaacccg ccctacaggt cgtcaaaagc ccagagtcga tacttagtga tacgatggcc
      361 ttttcccaag ccccctatgg agaactccat gaacccgcgc tccctggccc tccccctcct
      421 ggccctcgcc ctggccggct cctccctccg ggccgaagaa ggcatgtgga ccttcgacaa
      481 cctgccgacc aagaagattc aggcgggcta cggctgggcc ccggaccagg cctggctcga
      541 ccacgtgcgc ctctcctccc tgcgcttccc cggcgggtcc ggttccttcg tgagcaagga
      601 cggcctggtg ctgaccaacc accacgtggg ccgcggctgg atccagcgcg tgagcagcaa
      661 ggaggccgac tacgtgcaga acggctttgc cgccgccacc cgcgagcagg agatcaaggt
      721 gccgggcctt gagctgatga cgctcatggc catggagaac attactgacc gcctcgccaa
      781 ggccgtgaag gctggcacgc ccgagaagct ggccctgaag cagcgcgaga ccgagatcga
      841 gaagatcaag aaggagatgc aggagaagag cggcctcacc tgcgagcacg tgaccctcta
      901 ccagggcggc gagcactgga tctacagcta caagaagcac accgacgtgc ggttggtctt
      961 cgcccccgag cagcagatcg ccttcttcgg cggcgacccc gacaacttca ccttcccccg
     1021 ccacaacctg gacttctccc tcttccgcgt ctatgagaac ggcaagccct accagcccaa
     1081 ggatttcctg cactggaccc agacgggcct caaggccggc gacctcacct tcgtgaccgg
     1141 gcaccccggc cgcaccaacc gccaggacac ggtcgcccag atggaattct cggcggactt
     1201 cgccattccc atgcgcctga aggcctacga gcgccgcaag gccgccatgg tggagtacgc
     1261 caagacctcg cctgaagccg cccgccaggt caacacccag atcttcggca tcgagaacgg
     1321 catcaaggcc accacgggct actgggccgg cctgaaggac aaggacgcca tggcccgcat
     1381 ccgggccgcc gagaaggacc tgcgcgccaa ggtggccaag gacgcgaagc tcacggccga
     1441 ggcgggccag agctgggcga agatcgaggc ggccaccaag gtagccaagg acctggcgaa
     1501 ggacgcgctg aacgtgggca cggccaactc cacgctgctg ggctacgccc tgggcctggt
     1561 gcgcatcgcc gacgaggagg ccctgcccag cgagaagcgc ctgcccgagt acagcgacgc
     1621 caacctgaag accgccaagg cccgcatggg cgtgccggct cccttctaca aggagcagga
     1681 agtcttcatg ttcaccaagg gcctggagga ggccgccaag gaactgggcc cccagcacaa
     1741 gttcgtgaag gccatgctgg gcggcaagtc ccccgccgag gtggccaagg ccgctgtgga
     1801 tggctccaag ctgaacgacc ccgaggcccg caaggccctg ctggccggcg gcaagaaggc
     1861 catcgccgag agcaccgacc ccatgatcgc gctggccaag aagctcgatc ccatcagccg
     1921 cgagctccgc aagaagcagg aagaccaggt ggcgagcgtc atcaccgagc acggcacccg
     1981 catcgccaag gcccgcttcg ccgtctacgg caagaacacc taccccgacg ccaccttcac
     2041 cctgcgcctc tcctatggcg ctgtggcgga atacaaggcc aacggcacgc tgatccagcc
     2101 cttcaccacc ttcggcggcc tcttcgaccg ctacgacggc tggggcggca acgcgatcaa
     2161 ggcccaccac ggcgcctgga ccctgcccca gcgttgggtg gacaagcgcg gcgccttgga
     2221 cgcctcgctg cccttcaact tcgcccacaa ggtcgacatc atcggcggca actccggctc
     2281 gcccgtcatc gacaagaagg gcgaactggt gggcctcatc ttcgacggca acatcgagag
     2341 cctc
//
LOCUS       DATGWW010000004         1743 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_271830, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000004 DATGWW010000000
VERSION     DATGWW010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271830"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            65..1144
                     /locus_tag="VK150_00045"
     CDS             65..1144
                     /locus_tag="VK150_00045"
                     /inference="COORDINATES: protein motif:HMM:NF018213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative glycolipid-binding domain-containing
                     protein"
                     /protein_id="HLP29716.1"
                     /translation="MHRLVAPGPQAWEGSNRGLYNMLLGSWDAVVVDRLPEGEVRQSA
                     EIHATWALNGRAIQDLWIVPGIGDHSAVKGPVRYGTTLRIYDPKKDRWNVTWFNPVTG
                     AENHLEGRWEGGEIMQTGTTPQGLPVRWVFDRIRGDAFHWRGERQSEDGRTWIADTEF
                     LALRATSEPAKAGAPAPRQVTWNWTDRLGVERVSIREEGGLWVASGRAFVLHERVPVL
                     ATYQLTHGPDHRFREARIEVETGTGSKVLTLRRSGEGQWEVDGAVRKDLAGCEDVDLM
                     WSPYSNTPPLLAQPLAPGERRELKVAWVRFPDLEVHPLSQAYTRLPGQAPFRYRYENL
                     ESGYRGELSLDDSGLVMDYGSWRRR"
     gene            complement(1205..>1743)
                     /locus_tag="VK150_00050"
     CDS             complement(1205..>1743)
                     /locus_tag="VK150_00050"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HLP29717.1"
                     /translation="VKPKDIARQLTVLARHLSGCEAVGVRLKDGPGYPYAASLGFPER
                     FISLEDDLCATDEDGHLLRDDQRKPILACLCGRVLSGLVDRGQAYFTDRGSFVTASTS
                     ELLASSQEDQHLGRTRNRCHLAGYETVGLFPIRRDDVTYGLIQCNDSRPGQLTAQSID
                     LLENLAGTAAHLFQLAMT"
BASE COUNT          272 a          575 c          628 g          268 t
ORIGIN      
        1 gctcagcgcg accccgccca cgaccgtacc cacggttcca gtcccagccg gttcggagcc
       61 gttcgtgcat cgcctggtcg ccccgggacc ccaggcctgg gaggggtcga accgcggcct
      121 ctacaacatg ctgctgggca gctgggatgc ggtggtggtg gatcgcctgc cggaggggga
      181 ggtccgccag agtgccgaga tccacgcgac ctgggccctg aacggtcggg ccatccagga
      241 cctgtggatc gtgcccggga tcggcgacca ttccgccgtg aagggtccgg tgcgctacgg
      301 aaccaccctg cggatctacg atccaaagaa ggaccggtgg aacgtcacct ggttcaaccc
      361 cgtgacgggc gcggaaaacc accttgaggg ccggtgggag ggcggcgaga tcatgcagac
      421 gggcacaacg ccccagggcc ttccggtccg gtgggtgttc gaccgcatcc gaggcgacgc
      481 cttccattgg cgcggggaac ggcagtcgga ggatggccgg acctggatcg ccgacaccga
      541 attcctggcg ttgcgggcca cctcagaacc tgccaaggcg ggcgcgcccg ccccgcggca
      601 agtcacctgg aactggacgg accgtctggg ggtcgagcgg gtcagcatcc gggaggaggg
      661 cggcctctgg gtggcctcgg ggcgggcctt cgttctccat gaacgggtgc ccgtcctggc
      721 cacctaccag ctcacccatg ggcctgatca tcgtttccgg gaggcccgga tcgaggttga
      781 aaccggcacg ggctcgaagg tgctgacctt gcgtcgcagc ggggaggggc agtgggaggt
      841 ggacggcgcg gtccgcaagg acctggccgg ctgcgaggat gtggacctga tgtggtcccc
      901 ctacagcaac accccgcccc tcctggcgca acccctggcg ccgggcgagc gccgggagct
      961 gaaggtggcc tgggtgcggt tcccagacct ggaggtccat cccctgtccc aggcctacac
     1021 ccgactcccg ggtcaggctc ccttccggta ccggtacgag aacctggaga gcggctaccg
     1081 cggcgagctg agcctggatg attctggact ggtgatggat tacggttcct ggcgccgtcg
     1141 ctgacgcggc gccgccgtgc cggattccag cccgcgccat gacctggaac cccgcgcagg
     1201 ggtttcaggt catggcgagt tggaacaggt gggccgccgt gccggcgaga ttctccagga
     1261 ggtcgatgct ctgggccgtg agctgtccgg gccgggagtc attgcactgg atcaggccgt
     1321 aggtcacgtc atcgcgccgg atggggaaca gcccgaccgt ttcgtacccc gctaagtggc
     1381 agcggttgcg cgtccggccc aggtgctggt cctcctggga ggacgccagc agctcgctgg
     1441 tggaggcggt gacgaagctg cctcgatctg tgaaataggc ctggccccgg tccaccaggc
     1501 ccgacaacac ccggccgcac aggcaggcga ggatgggttt gcgctgatca tcccgcagca
     1561 ggtgcccatc ctcgtcggtg gcacagaggt cgtcctccag ggagatgaag cgctccggga
     1621 atcccaggct ggccgcatag gggtagccgg ggccgtcctt cagccgcacg cccacggcct
     1681 cgcagccgga caagtgccgg gccagcaccg tcagctgccg ggcgatgtcc ttgggcttca
     1741 cca
//
LOCUS       DATGWW010000005         1646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_90855, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000005 DATGWW010000000
VERSION     DATGWW010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90855"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..571)
                     /locus_tag="VK150_00055"
     CDS             complement(23..571)
                     /locus_tag="VK150_00055"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HLP29718.1"
                     /translation="MMEWLSPERRNLARLRAGDLEGLRWIYDTHADRLLNQCYRILLS
                     REQAEDVVQDLFVKLPSLVGEFRGESALGTWLYRVAHNMCLTRLQQARNRGRLEAENL
                     AGGEGSGAEVYELSDLLAKAMAVLDAETRSLMWLKEGEGLSLKELSEIFKLPEGTLKS
                     RLSRARERVREYLEKEAEVGRS"
     gene            907..>1646
                     /locus_tag="VK150_00060"
     CDS             907..>1646
                     /locus_tag="VK150_00060"
                     /inference="COORDINATES: protein motif:HMM:NF020390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 family protein"
                     /protein_id="HLP29719.1"
                     /translation="MEKSRFLAKVAEDAAFARHANDAVPARAAVPAGVEPYGGPWNRT
                     QAMHLLRRTLFGFTKADLDKAMSLDAAAVVDALLDVPAEAPAPPLVVSTDETTIPVGT
                     TWVDTPYIGDRNYERGRTLQSWWMGLILGQGFSLRERMTLFWHNHFATEWQVIGDSHH
                     SYYHLARLRTACLGNFKNLARQITLDPAMLRYLNGNSNTKTNPNENYGRELQELFTIG
                     KGPEVAPGNYTNYTEEDVKSAARVLTGWR"
BASE COUNT          314 a          580 c          474 g          278 t
ORIGIN      
        1 ctccgcctct ttgaacaacc gttcaacttc gtccaacctc ggcctccttc tccaggtatt
       61 cccgcacgcg ctcccgggcc cgcgacaggc gcgacttcaa cgtcccttcc ggcagcttga
      121 agatttccga cagctccttg agagaaaggc cctcgccttc cttcagccac atcagggagc
      181 gcgtctccgc atccagcacg gccatggcct tggccagaag atccgacagc tcgtaaacct
      241 cggcgccact tccctctccg cccgcgaggt tctccgcttc caggcggccc cgattcctgg
      301 cctgctgcag ccgggtgagg cacatattat gggccacccg gtagagccag gtgcccaggg
      361 cgctctcgcc ccgaaactcg cccaccagcg aaggcagctt cacgaacaga tcctgcacca
      421 cgtcctccgc ctgctcccgc gagagcagga tgcggtaaca ttggttgaga agacggtcgg
      481 catgggtatc atagatccac cgcaagcctt ccaggtcccc ggcgcgcagg cgcgccaggt
      541 tccgccgctc cgggctcagc cattccatca tgggcagggt gcttccctcg gttccattcg
      601 attcggccta atgtagtttc ggcaatgccg gcatgtactt tttcgcctcc aggcgcccca
      661 ttcctcgcgg agcccaattg tgaaggttgg acatgcgaag cggcccggcg gttccatccc
      721 gtttttcaat atcccaagcg acctgaaaag cccaaaaccc accttgacat cccccctata
      781 attcgtgggc cgcgcacaat gcggggagcc gggcggaagg atgcgcgcga ggcgccccgg
      841 cccgatacga aggatgcgtg gattccggat cgaaccggga tcacgggaag gacggggagg
      901 ggaatgatgg agaagagccg attcctggct aaggtcgctg aagatgctgc cttcgcgcgc
      961 catgccaacg acgccgtgcc cgcccgcgcc gccgtgcctg ccggggtaga gccctatgga
     1021 ggcccctgga accgaactca ggccatgcat ctcctgagac gcacgctgtt cggcttcacc
     1081 aaggccgatc tcgacaaggc catgtccctt gacgcggccg ccgtcgtgga tgccctgctc
     1141 gacgttcccg ccgaggcgcc ggcgccgccc ctcgtggtca gcacggacga gaccaccatt
     1201 cccgtgggca ccacctgggt ggacaccccg tatatcggcg atcgcaacta cgaacggggc
     1261 cgcaccctgc agagctggtg gatgggtctc atcctggggc agggcttctc cctgcgcgag
     1321 cggatgacgc tcttctggca caaccatttc gcaacggaat ggcaggtcat aggcgacagc
     1381 catcacagct actatcacct cgccaggctg cggaccgcct gcctggggaa cttcaagaac
     1441 ctcgcgcggc agatcaccct cgaccccgcc atgctgcgct acctgaacgg caactccaac
     1501 accaagacca accccaacga gaactacgga cgcgagctgc aggaactttt cactatcggc
     1561 aaggggcccg aggtggcgcc gggaaactac acgaactaca ccgaggagga cgtgaagtcc
     1621 gccgcccgcg tgctcaccgg atggcg
//
LOCUS       DATGWW010000006         1982 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_226840, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000006 DATGWW010000000
VERSION     DATGWW010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1982
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226840"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="VK150_00065"
     CDS             complement(<1..382)
                     /locus_tag="VK150_00065"
                     /inference="COORDINATES: protein motif:HMM:NF016763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HLP29720.1"
                     /translation="MTHGPARMLWGLFSLFVVYGTTLPFSFRLEPGYLAARVERINWH
                     PLGMRNGDICTPDLLQNILLFIPFGFLGYISLHEKRSRLKKTALVLMGASLSAFVECL
                     QIFSLTRWPAISDVIFNALGTAVGV"
     gene            600..1304
                     /locus_tag="VK150_00070"
     CDS             600..1304
                     /locus_tag="VK150_00070"
                     /inference="COORDINATES: protein motif:HMM:NF017945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HLP29721.1"
                     /translation="MVQDWALFTGEGLLFALRWGHFIFGIAWIGMLWYFNFVQGPFFA
                     TADAATKTAITKGLVPKALFYFRWGAMGTFLTGWAIISLRASGAGGAELLKTSWGATI
                     LTGALMGTVMWANVWFVILPRQKKIIASANGEKVENLPALARRAFLVSRTNTLLSIPM
                     LFFMGSASHLPIAIDGAKLGLWLTVVTVLLILIESNALLADKGATTKPIEKVSGVIHY
                     GLLLAVIFYALAEVIL"
     gene            1309..1710
                     /locus_tag="VK150_00075"
     CDS             1309..1710
                     /locus_tag="VK150_00075"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HLP29722.1"
                     /translation="MARSEPAATSPRRAFRGLGLAVLPATFLLLVLAATLELLSACNK
                     SERAPRDPLVVKGQATYSLHCGSCHHPDPARAGSLGPAVKGASLELLKARVLHGTYPE
                     GYTPKRSTKIMRKLPLTEADVEAIHAFLNKP"
BASE COUNT          369 a          696 c          562 g          355 t
ORIGIN      
        1 ccacccccac cgccgtgccc agggcgttga agatcacgtc ggagatcgcc ggccagcgcg
       61 tcagggagaa aatctggagg cattccacga aggcggacag agaggcgccc ataagcacga
      121 gggccgtctt cttgaggcgc gaacgctttt cgtggaggga gatatagccg aggaagccga
      181 aggggatgaa gagcaggatg ttctgcagca ggtcgggggt gcagatatcg ccgttgcgca
      241 tgcccagggg atgccagttg atgcgctcga cccgcgccgc gagatagccc ggctccagac
      301 ggaaactgaa gggcagggtg gttccataga caacgaacag gctgaagagg ccccagagca
      361 ttcgggcggg accgtgggtc acggggtgct ctcccccatc ccgagcaggg catggaccgc
      421 cttcaggatg ccgcggagaa accggtcctt cagcggggga cgcggttcgc atgataaacc
      481 caaggcatgg gggtaattat agcgtaataa cgccctggta tccggaatag cgcccatttc
      541 cctctcataa tcccggtccc attttatata tttacaactt taataaatag gaggcttcca
      601 tggttcagga ttgggcgcta ttcaccggcg aaggactgct gttcgccctg cgttggggtc
      661 acttcatttt cggcatcgcc tggatcggca tgctctggta cttcaacttc gtgcagggcc
      721 ccttcttcgc caccgccgac gcggcgacca agacagccat caccaagggg ctcgtcccca
      781 aggccctgtt ctacttccgc tggggcgcca tgggcacctt cctcaccggc tgggccatca
      841 tctccctccg cgccagcggc gcgggcggcg cggaactact caagacctcc tggggcgcca
      901 ccatcctgac cggcgccctc atgggaacgg tcatgtgggc caatgtctgg ttcgtgatct
      961 tgccccgcca gaagaagatc atcgcctccg ccaacggcga gaaggtggag aacctgccgg
     1021 ccctggcgcg gcgcgccttc ctggtctccc gcaccaacac cctgctttcc atccccatgc
     1081 tcttcttcat gggctccgcc agccacctgc ccatcgccat cgacggcgcc aagctcggcc
     1141 tttggctcac cgtcgtgacc gtgctcctta tcctcatcga gtccaacgcc ctcctggccg
     1201 ataagggagc caccaccaag ccgatcgaga aggtctccgg agtcatccat tacggcctgc
     1261 tcctcgccgt gatcttctac gcgctggccg aggtcatcct ctaaagccat ggcccgttcc
     1321 gagcccgccg ccacctcccc gcgccgcgcc ttccgcggcc tgggactggc cgttcttccc
     1381 gcgaccttcc tcttgctcgt cttggccgcc acccttgagc tcctctccgc ctgcaataaa
     1441 agcgagaggg cgccgcggga tcccctggtc gtgaagggac aggcgaccta ctccttgcat
     1501 tgcggctcct gccatcaccc cgaccccgcc cgcgccggct ccttgggccc ggcggtcaag
     1561 ggcgcgagcc tcgagcttct caaggcacgt gtcctccatg ggacgtaccc ggaaggatac
     1621 actcccaagc gatccacgaa aatcatgcgg aagctgcctc tcaccgaagc cgacgtcgag
     1681 gccatccatg ccttcctgaa caaaccctag agcgcccgta gcggaaacct ggggccgctt
     1741 cggggttgcg tcacgtcccc gggacgtgta tcttccccct gccgagagac ctcaaccatc
     1801 tggagaccga catggcccat accttgcctc ccctgcccta tcccaccgac ggcctcgagc
     1861 ccatttacga caaggcgacc ctcgagatcc accacggcaa gcaccatgcc gcctacgtgg
     1921 acaagctgaa ccaggccctc gccggcttcc cggtcctcca ggccaagaca accgaggagc
     1981 ta
//
LOCUS       DATGWW010000007         1659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_498, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000007 DATGWW010000000
VERSION     DATGWW010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_498"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..457
                     /locus_tag="VK150_00080"
     CDS             <1..457
                     /locus_tag="VK150_00080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29723.1"
                     /translation="FDGEAPFDLVLGTPPYWPEGHRLPAAHPQSVPARLEVRGSIADY
                     AQAAARLLAPGGCFACVFPNDQRDRALAALAAADLLCLHRREIVFKEGEPYGLDVFAA
                     ARRQDLPEDFATRAQCPEVEPPVLIRRADGTVDPAIARIRLAVGFPPGV"
     gene            934..>1659
                     /locus_tag="VK150_00085"
     CDS             934..>1659
                     /locus_tag="VK150_00085"
                     /inference="COORDINATES: protein motif:HMM:NF040138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HLP29724.1"
                     /translation="MNALKMLVTVGQRVTLSGLLAVAGLPPLLADTSEATIVVPSGPL
                     TVTAHQPVAFEGRSTDSRQSEDYVVNVIRWQFGDGQSAAGGLATHVFGKPGVYRVAMT
                     VRYTRKSCVRQNPDGTCSRYRITTGHARATRQVTVVAPPVASSLQASNLVPARGGTFT
                     LTPSYSRGIGSLSQGLACPPSGFPTAPIQADWSGPRTFVLTVTNAAGMTAQASVSVTP
                     QPVVVGAIQPANATKSVATSTSFG"
BASE COUNT          255 a          608 c          491 g          305 t
ORIGIN      
        1 cttcgacggc gaggccccct tcgacctcgt gctggggacg ccgccctact ggcccgaggg
       61 ccaccgcctg ccggccgccc atccccagtc cgtgccggcc cgcctcgagg tgcgcggcag
      121 catcgccgac tacgcccagg ccgcggcccg cctcctggcc cccggtggct gcttcgcctg
      181 cgtgttcccc aacgaccagc gcgaccgcgc cctggcggcc ctggcggcgg cggacctcct
      241 ctgcctccac cgccgcgaga tcgtcttcaa ggaaggcgaa ccttacggcc tcgatgtctt
      301 cgccgccgcc cgccgccagg atctcccgga ggatttcgcc acccgcgccc agtgccccga
      361 ggtggagccc cccgtcctca tccgccgcgc cgacggcacc gtcgaccccg ccatcgcccg
      421 catccggctc gccgtggggt tcccgccggg ggtgtgacgc ggaagggtgc ccccccctcc
      481 gggtcaagca ttgaaggctt gcttataaaa gcattcgtac gttggaacct gcggttcatg
      541 caccttgaat ccgcggcaag tctggcattc gtgggccagg cttcttgggt tgcattcgta
      601 cgaacatgca tcttgatgta gatgcatgtt ccatatatga tccattcaca ctcctgatca
      661 tccaattcga ccccatgggt ttccgggaat ttcccgggac ttgaaccaac cgctgatcat
      721 cacgaaagag ctcactgctc gccggatccc ttccggctga acgctctctc ccgtggttgg
      781 accagccggt acctagggcc aggcatgaaa tccggaatgg aagactccgc cgaaggtctg
      841 ggtccatgcc cgtttgcgcc gcgtcccaac tgacgcctcg cggatgggct tctctgaatc
      901 gccctcttct ccacccaggt caaggaccca tacatgaatg ccctgaagat gctcgtcact
      961 gttggccaga gggtcaccct aagcggcctc ctggccgtgg cgggtctgcc gcctctgctt
     1021 gccgacacgt cggaagcgac cattgtggtc ccttccggtc cactcacggt cacggcccat
     1081 cagccggtgg cgttcgaggg gcggagcacc gattcacggc agtcggaaga ctatgtcgtg
     1141 aatgtgatcc gctggcagtt cggggatggt cagagcgcgg ccggagggct ggccacgcat
     1201 gtgtttggca agcccggcgt ctaccgtgtt gccatgactg tccggtacac ccggaagtcc
     1261 tgtgtccgcc agaatcccga tggaacctgc tcaaggtacc ggatcacgac gggacacgcg
     1321 cgggcaaccc gccaggtgac ggtcgtggcg cctcccgtgg ccagttccct ccaggcctcc
     1381 aatctggtcc cggcccgcgg gggaacgttc accctcaccc caagctattc ccggggaatc
     1441 gggagcctga gccagggcct tgcctgcccc ccctcgggat tccccaccgc gcccatccag
     1501 gccgactggt cgggcccccg tacctttgtc ctgaccgtca ccaatgccgc tggcatgacg
     1561 gcccaggctt ccgtgagcgt cacgccgcaa ccggtggtgg tgggggccat ccagcctgcc
     1621 aatgccacca aatccgtggc tacctcgacc tcctttggg
//
LOCUS       DATGWW010000008         1706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_136053, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000008 DATGWW010000000
VERSION     DATGWW010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136053"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..317
                     /locus_tag="VK150_00090"
     CDS             <1..317
                     /locus_tag="VK150_00090"
                     /inference="COORDINATES: protein motif:HMM:NF017743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29725.1"
                     /translation="NLEAAGLPSECLVADVATWVPEGLGATGDVILLDPPRAGLEPAL
                     CERLATAGAGQLVLVGCDGAAFCRDLKRLADAWSLDQLAVLDLFPLTSHVECLALLSR
                     RP"
     gene            314..673
                     /gene="speD"
                     /locus_tag="VK150_00095"
     CDS             314..673
                     /gene="speD"
                     /locus_tag="VK150_00095"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: protein motif:HMM:TIGR03330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004014 - adenosylmethionine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine decarboxylase"
                     /protein_id="HLP29726.1"
                     /translation="MTALGHHLLAEFTGCDPAALSDLERVTSAMLQAAEASGATIVTH
                     SFHHFSPYGVSGAVIIAESHLAIHTWPEHGFAAVDFFSCGEVDMDRGLAVLKAAFAAT
                     GETRMALERGPLRPVKA"
     gene            complement(663..1166)
                     /locus_tag="VK150_00100"
     CDS             complement(663..1166)
                     /locus_tag="VK150_00100"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HLP29727.1"
                     /translation="MSGLHRVDTGLGPLQVAFDEDGALLYLGFAGHEFREGLLRKIAR
                     LQPTEAPRAEAVDRLVAQLEGYAAGRRRTFDVPLRLHGSPFEQRVWAALRRIPFGETR
                     SYGQLAADLGDPNLRRAVGRANGANPTSILVPCHRVIGVQGALTGYAGGLDMKARLLR
                     IEGALRP"
     gene            complement(1163..>1706)
                     /locus_tag="VK150_00105"
     CDS             complement(1163..>1706)
                     /locus_tag="VK150_00105"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29728.1"
                     /translation="RIPLTPDVWECLVWAILGQQVNLAFAYALRRDLNRLAGVPAGDG
                     LIAHPDAPRIASLRIEELQALRFSRRKAEYLVHAAGEVASGRLDLEGLTTATGAARAL
                     LSLRGCGPWTAQYVLMRGLGFRDGVPVGDAGLTLALQRWFALEARPDAAETLRLMAAF
                     APHRSLATFHLWASLKGTPA"
BASE COUNT          224 a          643 c          619 g          220 t
ORIGIN      
        1 gtaacctgga ggccgctggc ctcccctcgg aatgcctggt ggccgatgtg gccacctggg
       61 tgcccgaagg cctcggcgcc accggggatg tcatcctgct ggacccgccc cgggccggac
      121 tggagccggc cctctgcgag cgcctggcca cggcgggggc gggacagctc gtgctggtgg
      181 gctgcgacgg cgcggccttc tgccgggatt tgaagcgcct cgcggacgcc tggtccctcg
      241 accagctcgc cgtgctcgac ctcttccccc tcaccagcca cgtggaatgc ctggccctgc
      301 tctcgaggcg cccatgaccg ccctgggaca tcacctgctg gccgaattca ccggctgcga
      361 cccggcggcc ctctccgacc tcgagcgcgt cacctccgcc atgctgcagg cggcggaagc
      421 ctccggcgcc accatcgtca cccacagctt ccaccacttc agcccctatg gcgtgagcgg
      481 ggcggtgatc atcgcggaga gccacctggc catccacacc tggcccgagc acggcttcgc
      541 ggccgtggac ttcttcagct gcggcgaggt ggacatggac cgcggcctgg ccgtgctgaa
      601 ggccgccttc gccgccaccg gcgagacgcg catggccctg gagcggggcc ccctgcggcc
      661 cgtcaaggcc tgagggcgcc ctcgatccgc agcagccgcg ccttcatgtc gagcccgccc
      721 gcatagccgg tgagggcgcc ctggacgccg atcacccggt ggcagggcac gaggatggac
      781 gtgggattgg cgccgttggc gcggcccacg gcgcggcgga ggttcgggtc gcccaggtcg
      841 gcggccagct gcccgtagct gcgcgtctcg ccgaagggga tgcgccgcag tgccgcccac
      901 acgcgctgct cgaaggggct gccgtgcagc cgcaggggca cgtcgaaggt ccttcgccgg
      961 ccggccgcat agccttccag ctgcgccacg agccgatcca cggcctccgc ccgcggggct
     1021 tcggtgggct ggaggcgtgc gattttcctc agcagcccct cccggaactc gtgcccggcg
     1081 aaacccaggt agaggagcgc cccgtcctcg tcgaaagcca cctggagcgg gcccaggccc
     1141 gtgtcgaccc ggtgcaggcc gctcacgccg gggtgccctt caggctggcc cagaggtgga
     1201 aggtggcgag gctgcggtgg ggcgcgaagg ccgccatgag ccgcagcgtc tcggcggcgt
     1261 cggggcgggc ctccagggcg aaccaccgct gcagggccag ggtcaggccg gcgtccccca
     1321 cgggcacccc gtcgcggaaa ccgaggcccc gcatgagcac gtactgggcg gtccagggcc
     1381 cgcagccccg cagggagagc agcgcccggg cggcccccgt ggcggtggtc agtccctcca
     1441 gatccagccg ccccgaggcc acctccccgg ccgcatgcac caggtactcg gccttgcgcc
     1501 gcgagaagcg gagggcctgc agctcctcga tccgcagcga ggcgatgcgc ggcgcgtcgg
     1561 ggtgggcgat gaggccgtcg cccgccggaa cgcccgcgag ccggttcagg tcccggcgca
     1621 gggcgtaggc gaaggccagg ttcacctgct ggcccaggat ggcccacacc aggcactccc
     1681 acacgtccgg ggtgaggggg atgcgc
//
LOCUS       DATGWW010000009         2972 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_272083, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000009 DATGWW010000000
VERSION     DATGWW010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2972
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272083"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
BASE COUNT          465 a          913 c         1035 g          559 t
ORIGIN      
        1 cggatgttga tcccgccgta attaaacccc gtctcaactt tctccaacca gttgagatac
       61 gccataaatg tcgtgtccct ccctaagcac gtcagcttca tgttgctaaa ccacttcagg
      121 atcgctgcct tctacttcag cgatgattcc gtgaagctgg gggcctgggg gaggagcgga
      181 accagacgct cctgccactg ggcggggtct cctccgggcg agctgggcga gccgtcattg
      241 gatccccctg ggccagaggg cccgggcgca ctgcgggaag gaggtacacc tggctgggag
      301 cggggagagg gtgaggggaa cgccaggaac tgggcgtggg gcggccactg gccggccgct
      361 gggtgaatcg gcgggtacct tgggaaggcc gcggaggacg ccgggggcgg gaaaaccgcg
      421 gggtaggcca ccgtggtggc gggtagggca ctgcccaacg agccctgcgg ggtgtagaag
      481 ggctgctcgc tcggttgagc gtgggtgggg agcgccggcg gggtggccgg cgggggcggc
      541 tgggcaggtg tggccgggcg cggtggctag gccgcggcct ggggaggtgg gggagaaggc
      601 tggaggggaa gcggtggtgg aatccgcacc cggggcacga tcttctgggc caggaagtgc
      661 gccacagagc gtcccgcgtc cctaaggtcg gcttcctcct caggcggggg cggcgtgggc
      721 tccgcgatga accgggttta ccgggcttgc agagccttct aagccgcggc cgtcatcttg
      781 gcggcgtctt ctttgagctt ccgctcccta gtctcaatgt cccgcagctt ctcctggact
      841 tccagctccc tttactgtta gtccgccacg acttttcgca tcgcggccac ctgttccgcc
      901 acccgctgtt ccgccttgcg ggcgtgctcc tccatttcca tccgatgctg ctcatccttt
      961 tactttagca gccgctcaaa ttatgcttcc cgttccccct gggatgctta catagcgctg
     1021 aattgttgca tcagcgcgcc tacttgggca gtcagcgtcg cgatggggtc cggggtagtc
     1081 ggggcatcca ctctgaaggt gggggtttgg ccgttagccg tggtgctggc ctgctccagg
     1141 aaaggagatg ggccagtagg catttctgct tcggaagggt ccccgcccaa actcatgggc
     1201 cgaatcacgc ttaccaagtt gtgatccgat tcttccgaca ggtccgattc cgattccggg
     1261 accggagcgg gggggagctc ccggcgccag gccagccaaa gtttaccttc caccaggctg
     1321 tactgaaggc gggggagcgg ggaggccacc gtgtcgtggc cccccgtggg cgccgcctgt
     1381 tcccggccgc atccgcccat ggagctcagg cagaaccgat aggcgggggg gcgctccgct
     1441 cgggccccca agtccacctg ggagcgcgca cagaaggcgc aggaggcgtc ttccaggcgc
     1501 tggtgatgag tcagggcgac tactgctgag ttcgccaccc tggcgaattg gacaggcgtg
     1561 tccagtccca gggtctccag cagttccgct gagtgatccc gccagaacta cgggtcccag
     1621 agcagcgctt ccgggttccg caagacgtcc agctgctcat agtgggcagc acagcagggg
     1681 gtgtaggact cgaagccccc cacccaatta ccccctatgg ggatgacccg agccgaatag
     1741 agggcttccg aaggggtccg cccatccgcg atgcatcggg tgcattgtcc tgccttagcg
     1801 atgatggctg gggagatcaa cagctcccgg agacgccgta ggactggagc ctcattctcc
     1861 ggagtgaacc actataacgt ggtgcagatg gtttctactc cggacaacta ccatgccgac
     1921 accgtatctt ccactcccat gaagaagtgg gcttcttcca cccatacgag gtctcccgga
     1981 cgggggtggc cccagtacgt ccgaagatct tccaccgcat aggcgtgacg cctctcgccc
     2041 agatgagtca ccacctcggc gttgatgatg gcgtcagtcg attggggctg cctatcttcg
     2101 taacggcagt ccctgatgtg cttcaagatg tggaccctgc gccctgaagc taaggcgcta
     2161 tccaccaggc ggaaggcctc ggtggttttc ccggccccca tggggcccac aatcagtgtg
     2221 gcgggcgcca cgtggggggg ggaggggaac ggttgggagg gctctagagt atcctctggg
     2281 ccctcaggga tggggtcagg gcgcgaccca cactccctgc cttggtcgcc atgtgttgcg
     2341 ggcgcgtctc gcggggcgcc gggggggcca acccccggcg tgccctcccc gcggcccgtc
     2401 ctccggatac ttccccctgg cccgcctgcc ctgcctcggg gacccgggcc gtcgcgccga
     2461 gcggttctgt ggcggggggg ggtgtcggct tcttccgccg cttgactggg gggtggccca
     2521 tacagctccg gcatcagagg cttgctggac cccatcccat ctggaccagg ggcccaggac
     2581 tggggaggac ccagggggga agcgctctgg gaaatgccta gggtggggcc ttgtgatggg
     2641 gtggcacctt ctggggcggc ctgggcggtg ggaggggcgc cctgggcctg gccagccgcc
     2701 agagacggcc catccaaggt tggggatcgg gggaggggcc ccaggggagt gtcgccaggg
     2761 ggggccaacc accccccact ggacctcatg gggcccccca gcctggggta ggctgagctg
     2821 gccctcacag taggtgatga ctgggcgcat aactggccct tgcccaaggc cttgaaggcc
     2881 tcagacatac tcctccaggc ccctttgggg ctgggggtac ttactatgct gggttcttat
     2941 tgagtcatat taacttcaat ttttcttact ta
//
LOCUS       DATGWW010000010         1985 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_91296, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000010 DATGWW010000000
VERSION     DATGWW010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1985
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91296"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..384)
                     /locus_tag="VK150_00110"
     CDS             complement(67..384)
                     /locus_tag="VK150_00110"
                     /inference="COORDINATES: protein motif:HMM:NF014655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adaptor ClpS"
                     /protein_id="HLP29729.1"
                     /translation="MARQVKQDGQVLTRKRAKVKEPGLWKVLLHNDDYTTQEFVVWLL
                     KTVFRKAEPEATAIMLAVHRAGVGVAGTYTRDVAETRAERGRQLAERDGFPLLLTVEP
                     ADA"
     gene            complement(404..766)
                     /locus_tag="VK150_00115"
     CDS             complement(404..766)
                     /locus_tag="VK150_00115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PqqD family protein"
                     /protein_id="HLP29730.1"
                     /translation="MTTFPDEAFLAAVPAQALSSEPGEAGTVVLIRPKILSPRWAWLL
                     RLMKKPVYRVRLDARGTAVWQACDGERTVAEVVRVVGLAFPEEPDTTVRTALFLRELA
                     RGGFLQLMARHREPDPLS"
     gene            complement(875..>1985)
                     /locus_tag="VK150_00120"
     CDS             complement(875..>1985)
                     /locus_tag="VK150_00120"
                     /inference="COORDINATES: protein motif:HMM:NF015148.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="OPT/YSL family transporter"
                     /protein_id="HLP29731.1"
                     /translation="TYVVAGILFAAAVTFFVTWRIFQVGAMTSFVAALVMIILGFFFA
                     AISGYLVGIMGSSNNPISGLTLTALVVTALVMVVLGVKGQEGVAAVLGVAAIVCVSAA
                     VAGEMLQDLKAGHILGGTPWRMEVGDLIGVALASVVLFVPLMVLHEGDISAQSTKRIA
                     ELTAQQVQVVTAPDGKTYSLDQVKQLPADQKKAVLSLDAGFGSKQLAAPQAGLMALLS
                     RGIVEGKMAWPLIIVGMMMGFAFILMQVKSPMLVSVGMYLPLETTFAIFLGGLIKGAV
                     EMFGAKRGLNEAQKVRVENNGVLLAAGLIAGEALVGLLFASLAFFEVNFKLIAKPGMF
                     WISLLILAGIAIYLVKVPLANAGEADEPAPPSANF"
BASE COUNT          341 a          671 c          692 g          281 t
ORIGIN      
        1 cgggccttgg cgaggtcgaa ggcccgctgg aagccctggt tcagctcggg ggacagctgc
       61 ggcgaatcag gcatcggcag gctccaccgt gagcagcagg gggaagccgt cgcgctcggc
      121 cagctggcgg ccccgctcgg cgcgggtctc cgccacgtcg cgggtgtagg tgcccgccac
      181 gcccacgccc gctcggtgca ccgccagcat gatggccgtg gcctcgggct ccgccttccg
      241 gaagaccgtc ttcaggagcc acaccacgaa ctcctgggtg gtgtagtcgt cgttgtggag
      301 cagcaccttc cacaggcccg gctccttcac cttcgcccgc ttgcgggtga ggacctggcc
      361 atcctgcttc acctgcctgg ccatgggaaa cgcctccggg gcatcaggat agcgggtcag
      421 gctcccggtg ccgcgccatc aattggagga agcccccccg cgccagctcc cgcaggaaca
      481 gcgccgtgcg caccgtggtg tcgggctctt ccgggaaggc cagccccacg acccggacca
      541 cctcggccac ggtccgctcg ccgtcgcagg cctgccacac cgccgtgccc cgggcgtcca
      601 gccgtacgcg gtagacgggc ttcttcatca gccgcagcag ccaggcccag cgcggcgaga
      661 ggatcttggg tcggatcagg accaccgtgc cggcctcgcc gggctccgag gaaagggcct
      721 gggcgggaac cgcggcaagg aaggcttcat caggaaaggt cgtcatggtt gggcttccag
      781 gcggaaggat aaagccaagg cccggcttgg ccgggccttg gcgtgggggc ccgggggtat
      841 gcgcacagcg cggaaccccc ggagggcatc aggtctagaa gttggcgctg ggaggcgcgg
      901 gctcgtcggc ttcgccggcg ttggccagcg gcaccttcac aaggtagatc gcgatgcccg
      961 ccaggatcag caggctgatc cagaacatgc cgggcttggc gatgagcttg aagttcacct
     1021 cgaagaaggc cagggaggcg aagagcagcc ccaccagcgc ctcgcccgcg atgaggcccg
     1081 cggccagcag cacgccgttg ttctcgacgc gcaccttctg ggcctcgttc aggccgcgct
     1141 tggcaccgaa catctcgacg gcgcccttga tcaagccgcc gaggaagatg gcgaaggtcg
     1201 tctccagggg cagatacatg cccacggaca ccagcatggg gctcttgacc tgcatgagga
     1261 tgaaggcgaa gcccatcatc atgccgacga tgatcagggg ccaggccatc ttgccttcca
     1321 cgatgccgcg gctgagcagc gccatcaggc ccgcctgagg cgcggccagc tgcttggagc
     1381 cgaagccggc atcgagggag aggacggcct tcttctggtc cgcagggagc tgcttcacct
     1441 ggtccagcga atacgtcttg ccgtcaggcg ccgtgaccac ctgaacctgc tgggcggtca
     1501 gctcggcgat gcgcttggtg ctctgggcgg agatgtcgcc ctcgtgcagc accatgaggg
     1561 gaacgaacag caccacggac gccagcgcca cgccgatgag gtcgcccact tccatgcgcc
     1621 agggggtgcc gcccaggatg tggccggcct tgaggtcctg cagcatctcg ccggcgacgg
     1681 cggcgctcac gcagacgatg gccgccacgc ccagcacggc ggcgacgccc tcctggccct
     1741 tcacgccgag caccaccatg accagggcgg tgaccacgag ggcggtcagc gtcaggccgg
     1801 agatggggtt gttgctcgag cccatgatgc cgacgaggta gccgctgatg gccgcgaaga
     1861 agaagcccag gatgatcatg accagggccg ccacgaagga ggtcatggcg cccacctgga
     1921 agatccgcca ggtcacaaag aaggtgacgg cggcggcgaa gaggatgccg gccaccacat
     1981 aggtg
//
LOCUS       DATGWW010000011         3408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_227150, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000011 DATGWW010000000
VERSION     DATGWW010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3408
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227150"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1736
                     /locus_tag="VK150_00125"
     CDS             <1..1736
                     /locus_tag="VK150_00125"
                     /EC_number="5.6.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF013311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA topoisomerase"
                     /protein_id="HLP29732.1"
                     /translation="NATDAGREGELIFDLVYRLAECQKPVKRFWTSSLTPEAIQAAYA
                     AMKPGEAYVGLREAARSRQEADWLVGINATRAQTLRMRRAGAEDGVWSVGRVQTPTLA
                     LLVRRELDIRDFKPQPFWTLRARFAHPNGAYEGRWFKEQGDQAVERFATEAEALALAA
                     RLEGRPGKIRSAAGRTEKKKPELLYDLTALQKEANKRFGLTAEGTLGLAQNLYEKQLI
                     SYPRTNSRHLTEADALKAPQWIKALAQGQLAELQPFLDDLRKRWPVKLDKRFVNDKEV
                     EDHAALVPTEKPARGLAGDELRVYDLIARRFLGAYFPDRVEAKTTIITEVEGETFKTN
                     GTVVKEEGWSAVDPPHRRKKAEKAADPAEAEEEAEDDVEGGLPVVKKGDGVETTSLHP
                     KEGKTTPPKRMSEGDLLSAMQGAGKELDDETLRGAMKDCGLGTPATRANMIETLIKRA
                     YIERKRNVLLPTEKGIRLIQGLPTEALRSAELTGTWEARLERMRRGEEARDTFMTDIR
                     SFVTGVVRELQEAPAPHVSGGPCPTCGKPMRVIPSTRRGEFFHRCSACNVNAPVPKAP
                     GRAAAVPDHPS"
     gene            complement(1746..2126)
                     /locus_tag="VK150_00130"
     CDS             complement(1746..2126)
                     /locus_tag="VK150_00130"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HLP29733.1"
                     /translation="MRREVEGLKKASAQYRSDIAALKRRVDALEKARARTEKKAEQAG
                     SSKDGEETTSIRFSAKGLASQRQRLGLSAMEMGLLLGVSAQTIYNWEAGKSRPRKQQL
                     SAVAALRKMGKRQIAAALAQPPAE"
     gene            2628..>3408
                     /locus_tag="VK150_00135"
     CDS             2628..>3408
                     /locus_tag="VK150_00135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29734.1"
                     /translation="MSYDPFDGVLLDDARPPVPGATSMMLHLRVARRQARQHGWPTPR
                     LDGLRARSQACRELLAQGLFPATLRALQAHGLDLGPAKALHSLAAVVVHMDSYLQEVD
                     RAGCLEPDAALWRAVDLELAGTRGLWIERTEADGPLEAGLRDLAPSRLRALGCVPGLG
                     GATFALATRKGDGRSGLFGTPQPLVEWFLDGLETHGQGLPNDLALAEPAGWGEAPWAA
                     ALESLFDGPLTLEPHADAFQRGLVEGPMDLLRHACEQVCAWV"
BASE COUNT          551 a         1230 c         1146 g          481 t
ORIGIN      
        1 tgaacgccac ggacgccggg cgggagggcg agctgatctt tgatctcgtc taccgccttg
       61 cggaatgcca aaagccagtc aagcggttct ggacctcgag cctcacgccg gaggcgatcc
      121 aggcggccta cgcggccatg aagcccggcg aagcctacgt gggcctccgc gaggccgcgc
      181 gcagccgcca ggaggctgac tggctggtgg gcatcaacgc cacgcgggcc cagacgctgc
      241 gcatgcgccg ggcgggcgcg gaggacggcg tgtggagcgt cggccgggtg cagacgccca
      301 ccctggccct gctggtgcgc cgggagctgg acatccgcga cttcaagccc cagcccttct
      361 ggaccctgag ggcccggttc gcccatccca acggcgccta cgagggccgc tggttcaagg
      421 agcagggcga tcaggccgtg gagcgcttcg ccacggaagc ggaagccctg gccctggcgg
      481 cccggctgga gggccgcccc ggcaagatcc gaagcgccgc ggggcgcacc gagaagaaga
      541 agcccgagct gctctacgac ctcaccgccc tgcagaagga ggccaacaag cgcttcggcc
      601 tcaccgccga gggcacgctg gggttggctc agaacctcta cgagaagcag ctcatctcct
      661 acccccgcac caacagccgt cacctcacgg aggccgacgc cctcaaggcc ccccagtgga
      721 tcaaggcatt ggcgcaagga cagctcgccg agctgcagcc cttcctggac gacctgcgca
      781 agcgctggcc cgtgaagctg gacaagcgct tcgtcaacga caaggaggtg gaggaccacg
      841 cggccctggt gcccacggag aagcccgccc ggggcctggc gggcgacgag ctgcgcgtct
      901 acgacctcat cgcccggcgc ttcctggggg cctacttccc tgaccgggtc gaggccaaga
      961 ccacgatcat caccgaggtc gagggcgaga ccttcaagac caacggcacg gtggtgaagg
     1021 aggaaggctg gtccgccgtg gatcccccgc accgccgcaa gaaggccgag aaggccgcgg
     1081 atccggcgga ggccgaggag gaggccgagg acgacgtgga aggcgggctg cccgtggtga
     1141 agaagggcga cggggtggag accacctcgc tccatcccaa ggagggcaag accaccccgc
     1201 ccaagcgcat gagcgaaggg gatctgctct ccgccatgca gggggcgggc aaggagctcg
     1261 acgacgagac gctgcgcggg gccatgaagg attgcggcct gggcacgccg gccacccggg
     1321 ccaacatgat cgagacgctc atcaagcgcg cctacatcga gcgcaagcgc aacgtcctgc
     1381 tgcccacgga aaaaggcatc cggctgatcc agggactacc caccgaggcc ctgcgcagcg
     1441 cggaactgac cggcacctgg gaggcccgtc tggagcgcat gcgccgaggc gaagaggccc
     1501 gggacacctt catgaccgac atccggagct tcgtcaccgg cgtggtgcgc gaactccagg
     1561 aggcgcccgc cccccacgtc tcgggcgggc cctgccccac ctgcggaaaa cccatgcgcg
     1621 tcatcccgag cacccggcgg ggcgagttct tccaccgctg ctcagcgtgc aacgtcaatg
     1681 caccggtgcc aaaggccccg ggtcgcgcgg cagccgtccc ggaccatccc agctgatcgg
     1741 ggggcttact ccgccggggg ctgggccagg gcggcggcga tctgccgctt ccccatcttc
     1801 cggagggccg cgacggcgga cagctgctgc ttgcgcggcc tcgacttccc ggcttcccag
     1861 ttgtagatgg tctgcgccga cacgccgagc agcaggccca tttccatggc ggagaggccc
     1921 aggcgctgcc gctgggaggc cagccccttc gcgctgaacc ggatggatgt cgtttcctcg
     1981 ccgtccttcg aggaacccgc ctgctccgcc ttcttctcgg tccgggcccg ggccttctcc
     2041 agggcatcca cccgccgctt cagggccgcg atgtccgacc ggtactgggc ggaggctttc
     2101 ttcaggcctt cgacttcccg acgcacctct tttctggcca gccgaaggat ttcttccttt
     2161 agggtcgatg cgaaatttga cattttcgtc ctccatccac tggaatgatt cagctagata
     2221 aaccagcaac catggtcttc gatctggtgc ctctgggggc ggaagcggat tccgtgtcca
     2281 aagcccctca aacttaaacc ggtggataga aagtagcaat ggctgtagaa cctgccgggt
     2341 tgccgcaaga tcgggcccca cggcactggc catgaaatcc aggcgtccga gaagcgggag
     2401 cctcaaggtc ccaatcggtt cgggacacga atcatggttc ctccagatcg gatgagcctt
     2461 tgcaagctgt accctggcgc cctgccgccg agattggaca ccctctgtcc agtcctcgcc
     2521 ttgaacctgg tgcgcgggga gatccccagc cgccatccct cccgcaccgc cctccccggg
     2581 catctggcag gatggacgga agcccccttc tcgcgaggcc cccccgcatg agctacgacc
     2641 cctttgacgg cgtgctgctg gacgacgccc ggccccccgt gccgggtgcg accagcatga
     2701 tgctgcacct gcgggtggcg cgccggcagg cccggcagca cggctggccc acgccgcgcc
     2761 tggatgggct ccgggcccgg tcccaggcct gccgggagct gctggcccag ggcctgttcc
     2821 cggcgaccct ccgcgccctc caggcccacg ggttggacct gggccctgcc aaggccctcc
     2881 acagcctcgc cgccgtggtg gtccacatgg actcgtacct ccaggaagtg gaccgcgccg
     2941 gctgcctgga gcccgatgcg gccctctggc gggcggtgga cctggaactc gccggaacgc
     3001 gcggcctctg gatcgagcgg accgaagccg acggccccct ggaggccggc ctgcgcgacc
     3061 tggcgccgtc ccgcctccgg gccctgggct gcgttccggg cctgggcggc gccaccttcg
     3121 ccctggccac ccgcaagggt gacgggcgtt ccgggctctt tggcaccccc cagcccctgg
     3181 tcgaatggtt tctcgacggc ctcgaaaccc acggccaggg cctccccaac gacctcgccc
     3241 tggccgaacc ggcgggctgg ggcgaggcgc cctgggccgc cgcgctggaa tccctcttcg
     3301 acggtcccct gaccctggag ccccatgccg acgcgttcca gcggggcctg gtggaggggc
     3361 ccatggacct gctgcggcac gcctgcgagc aggtctgcgc ctgggtgg
//
LOCUS       DATGWW010000012         3010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_46033, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000012 DATGWW010000000
VERSION     DATGWW010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3010
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46033"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1147
                     /gene="pepD"
                     /locus_tag="VK150_00140"
     CDS             <1..1147
                     /gene="pepD"
                     /locus_tag="VK150_00140"
                     /EC_number="3.4.13.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR01893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="beta-Ala-His dipeptidase"
                     /protein_id="HLP29735.1"
                     /translation="ADGWLAAPGTTLGADNGIGVSAALAVLASKDIAHGPIEALITID
                     EETGLTGANGLQPGRLKAKFLLNLDSEEEGFLTIGCAGGVDTIATRKLTRVTPPAGAR
                     AYRLKVFGLKGGHSGIDINAGRGNAIRILAQLLGFLKPAFGLALASIKGGNKRNAIPR
                     EASAILFLDPAKEQALREALASHEAHWRAAFGAFDPGLHLALEPGEAAQAMSSADAEA
                     LINLLLSLPHGVEAMSPDIKGLVQTSTNMGVIDTHDDMVEVNLLTRSSIDASKAALSE
                     RIAATCALGGFQSHTTGGYPGWKPEPDASLVRIVNDANQAVFGKPLEIMAIHAGLECG
                     LIGEKYAGMEMVSFGPSMWDVHTPDEHVSVPSVGNFWKLLTSVLETV"
     gene            1225..1315
                     /locus_tag="VK150_00145"
     tRNA            1225..1315
                     /locus_tag="VK150_00145"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1259..1261,aa:Ser,seq:gga)
     gene            complement(1409..1726)
                     /locus_tag="VK150_00150"
     CDS             complement(1409..1726)
                     /locus_tag="VK150_00150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29736.1"
                     /translation="MYVTNVPNPEGDTCPCEGWNNHWVKFHPDRFAGTDQSRCSAVGC
                     QGVFKHGGHVQKAGVPGLTDRAVYIIPLCEACHDPANTRPYLIHSHIALVPADPKVTC
                     DRR"
     gene            complement(1752..2054)
                     /locus_tag="VK150_00155"
     CDS             complement(1752..2054)
                     /locus_tag="VK150_00155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29737.1"
                     /translation="MQVINVPNSGEWKCSCGNWKDHWVKFNPNKLAAMLQAHCSAVGC
                     AGKFEQGGHVRRAGDLTVYIVPLCAACNSPENTGPYYIYDHVSRVPADPKETCGQG"
     gene            2282..2683
                     /locus_tag="VK150_00160"
     CDS             2282..2683
                     /locus_tag="VK150_00160"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HLP29738.1"
                     /translation="MTDPLRHLDAPSRRTIQAFLDAALQGSAEGMRDLFTKHCEFTGA
                     LSAGKLRGRQVIESHYRQAFKGISARGATVLRGVAAQDGKVVLEWEILPLGRPDSEPA
                     KGRTILELDASGLIARIKTEWNPRQIFNGGV"
     gene            2735..>3010
                     /locus_tag="VK150_00165"
     CDS             2735..>3010
                     /locus_tag="VK150_00165"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29739.1"
                     /translation="MDAVSRESPSAAPGHRRIAHLDMDAFFASVELLDHPDLKGLPVV
                     VGGRRNLTEGAAYPRLKEYVGRGVATTATYEARALGVHSGMGLMKAAA"
BASE COUNT          481 a         1112 c          947 g          470 t
ORIGIN      
        1 ggccgatggc tggctggcgg caccgggcac caccctgggc gccgacaacg gcatcggcgt
       61 gagcgccgcc ctggccgtgc tggccagcaa ggacatcgcc cacgggccca tcgaggccct
      121 gatcaccatc gatgaggaaa cgggcctcac cggcgccaac ggcctgcagc ccggccgcct
      181 caaggccaag ttcctcctga acctcgacag cgaggaggag ggcttcctca ccatcggctg
      241 cgccggcggg gtggacacca tcgccacccg gaagctcacc cgcgtcaccc cgcccgcggg
      301 cgcgcgcgcc taccgcctga aggtcttcgg cctcaagggc ggccactccg gcatcgacat
      361 caacgccggc cggggcaacg ccatccgcat cctggcccag ctgctcggtt tcctgaagcc
      421 cgccttcggt ctcgccctcg cctccatcaa gggcggcaac aagcgcaacg ccatcccccg
      481 cgaggcctcg gcgatcctct tcctcgaccc cgccaaggaa caggccctcc gcgaggccct
      541 ggccagccac gaggcccact ggcgcgccgc cttcggcgcc ttcgacccgg gcctccacct
      601 ggccctggaa cccggcgagg ccgcccaggc catgtcctcc gccgacgcgg aagccctcat
      661 caacctgctg ctctccctgc cccacggtgt ggaggccatg agccccgaca tcaagggcct
      721 ggtgcagacc tccacgaaca tgggcgtcat cgacacccac gacgacatgg tggaagtgaa
      781 cctgctcacc cgcagctcca tcgacgcctc caaggccgct ctctccgagc gcatcgccgc
      841 cacctgcgcc ctgggcggct tccagtccca caccaccggc ggctatcccg gctggaaacc
      901 cgagcccgac gcctccctgg tccgcatcgt caacgacgcg aaccaggccg tgttcggcaa
      961 gcccctggag atcatggcca tccacgccgg cctggaatgc ggcctcatcg gcgagaagta
     1021 cgccggcatg gagatggtct ccttcggccc cagcatgtgg gacgtgcaca cccccgacga
     1081 gcatgtgagc gtgccctccg tcggcaactt ctggaagctg ctcaccagcg tccttgagac
     1141 tgtctagccc gcccgatcac ggcccttggc cccggcccgg ggccgtgata accttgctgc
     1201 ttccgcccat ccgcggaagc cacgggagag ttgtccgagt ggctgaagga gcacgattgg
     1261 aaatcgtgta acggtcaaaa gccgttcggg ggttcgaatc ccccactctc cgccagaaag
     1321 ccccgtcacc gtgaggtttc ggggctttcc ccttcaggtt ccgcgggatg cccgggcgcg
     1381 ccttcccgcc aaggccggaa cgccaggatc acctccggtc gcaggtgact ttcgggtccg
     1441 cggggaccag ggcgatgtgg ctgtgaatga ggtacgggcg ggtgttcgcc gggtcgtggc
     1501 aggcctcgca gagggggatg atgtagactg cccggtcggt gagtccaggc acgccggcct
     1561 tctggacatg gcctccgtgc ttgaagacac cttggcagcc tacggcgctg caccgcgact
     1621 ggtccgtacc ggcgaagcgg tcgggatgga acttcaccca gtggttgttc cagccctcgc
     1681 aggggcaggt gtctccctca gggttcggca cgttcgtcac gtacacgggg cctcctccag
     1741 gctcggcggg atcatccctg accgcaggtc tcctttggat cggcgggaac cctggagacg
     1801 tggtcgtaga tgtagtacgg cccggtgttc tccgggctgt tgcatgccgc gcacaacggg
     1861 acgatgtaga cggtcaggtc cccggccctc cgcacatgcc ctccctgctc gaacttcccg
     1921 gcgcatccga ccgcgctgca atgggcctgg agcatggctg cgagcttgtt cgggttgaac
     1981 ttcacccagt ggtccttcca gttgccgcag gagcacttcc attcgcctga attcggcacg
     2041 ttgatcactt gcatgcgccc cccctcccgc aaccggtccc agccttgatt tccatgagaa
     2101 cccctccccg gggcgacagg cgtgaaaacg ggcgaacggt cgattcgggg ccctgaacgg
     2161 gaacgcccgt tcagggagcc cactccccgg gccctgtcca gagcgccgtc ccaccggacg
     2221 cccggcaggc cttatgcaac caggaacaca tcggttccgg cctctggtag gatcctcctc
     2281 catgaccgac ccgttacgcc atctggacgc cccctcgcgg cgaaccatcc aggccttcct
     2341 ggatgcggcc ctgcagggct ccgccgaagg catgcgcgac ttgttcacga agcattgcga
     2401 attcacgggg gccctctcgg cgggcaagct gcggggtcgc caggtgatcg aatcccacta
     2461 ccgccaggcc ttcaagggga tcagcgcccg aggcgccacg gtcctcaggg gtgtggccgc
     2521 ccaggacggg aaggtggtgc tcgaatggga gatcctgcca ctgggcaggc cggattccga
     2581 acccgccaag ggacgcacga tccttgagct ggatgcctcg ggcctgatcg cccgcatcaa
     2641 gacggaatgg aaccctcggc agatcttcaa tggcggggtc tgaccgcccg gccgtaccct
     2701 ggctccttcg cgccggtgcc gctaccctcg ctccatggac gccgtctccc gggaatcccc
     2761 cagcgccgcg ccgggccacc gccgcatcgc gcacctggac atggacgcgt tcttcgcctc
     2821 ggtggagctg ctggaccacc cggacctgaa gggcctgccc gtggtggtgg gcggacggcg
     2881 caacctgacg gagggcgccg cctacccgcg gctgaaggaa tacgtcggcc gcggcgtggc
     2941 gaccaccgcg acctacgagg cccgcgccct cggcgtgcac agcggcatgg gcctcatgaa
     3001 ggccgccgct
//
LOCUS       DATGWW010000013         1873 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_1417, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000013 DATGWW010000000
VERSION     DATGWW010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1873
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1417"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..1258
                     /locus_tag="VK150_00170"
     CDS             188..1258
                     /locus_tag="VK150_00170"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: protein motif:HMM:NF001965.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_function: GO:0050568 - protein-glutamine glutaminase
                     activity [Evidence IEA];
                     GO_process: GO:0006482 - protein demethylation [Evidence
                     IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0018277 - protein deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HLP29740.1"
                     /translation="MSLERKRRVLIVDDSALVRQVLAGILSRHPMLEVVGVAKDPYEA
                     RERIKELDPDVLTLDVEMPRMDGLTFLGKLMKGHPMPAVMLSSLTAKGTSTALDALDL
                     GAVDVIGKPAMDQAKGLEAMGAEIAETVYAASLARVQGRPQAPRQEGAAAPSPLAPLA
                     VRAKSGRSLIAIGASTGGTEALRQVLEALPGNLPPIAVVQHMLPGFTEAFASRLDRGC
                     RARVKVAEDGEPLKTGTVYFAPNEIHLSVARGGGGLLALLAGADRVSRHLPSVDVLFA
                     SAAEACGPHALGVILTGMGDDGARGLLQMRQKGARTLGQDEATCVVYGMPRAAWSRGA
                     VETQLPLGDIAGHLVAWCQREH"
     gene            1248..>1873
                     /locus_tag="VK150_00175"
     CDS             1248..>1873
                     /locus_tag="VK150_00175"
                     /inference="COORDINATES: protein motif:HMM:NF023273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3365 domain-containing protein"
                     /protein_id="HLP29741.1"
                     /translation="MNTESATPSEGSGAPPKARRAKLVTSRAFLVLFGIWSVIVAIFI
                     VVILIFSFSEYKQIALARAVDSYHKDLVVRRWASERGGVYVPLDDKTPPNPYLAHRAD
                     RDVTTTDGKRLTLVNPAYMTRMVHELGQDAYGLRGHITSLTPIRPDNAPDAWERKALE
                     SFEKGGRNYFEVVQEKDQKVLRYMGAFLVEKSCLSCHAHQGYQVGDVRG"
BASE COUNT          292 a          649 c          641 g          291 t
ORIGIN      
        1 tgctagcata gcgctccccg gtggcgccgc gccggcctgg tttgacagcc gggctattcc
       61 agcaatacga tcggctgaaa gatgattctc ggtcagcgcc cgagcgggac accgtgatca
      121 accgggagcg gacgtatctt caggaagtca tccgggcgcc gatgggagat gacgtggagc
      181 tgttcacatg agcctcgaac ggaagcggcg cgtgctgatc gtggatgaca gcgccctggt
      241 ccgccaggtg ctggcgggca tcctgtcgcg ccacccgatg ctcgaggtgg tgggtgtggc
      301 caaggatccc tacgaggcgc gggaacggat caaggaactg gatccggatg tcctcaccct
      361 ggatgtggag atgccccgca tggacggcct caccttcctc ggcaagctga tgaagggcca
      421 ccccatgccc gcggtgatgc tgtccagcct cacggccaag ggcacttcca ccgccctgga
      481 cgccctggac ctgggcgccg tggatgtcat cggcaagccc gccatggacc aggcgaaggg
      541 cctggaggcc atgggcgccg agatcgccga gacagtctac gcggcgtccc tcgcccgtgt
      601 gcaggggcgg ccccaggcgc cccggcagga aggtgcggcc gccccgtcgc ccctggcccc
      661 gctcgccgtc cgcgccaagt cgggccggtc cctcatcgcc atcggcgcca gcaccggtgg
      721 caccgaggcc ctgcgccagg tgctcgaggc ccttcccggg aacctccccc ccatcgccgt
      781 tgtgcagcac atgctgccgg gcttcaccga ggccttcgcc agccggctgg accgcggctg
      841 ccgcgcgcgg gtcaaggtgg ccgaggatgg ggagcccctg aagacaggca cggtctactt
      901 tgcgccgaac gagatccacc tctctgtggc ccgcggcggc ggcggcctgc tggccctgct
      961 ggcgggggcg gaccgggtct cccggcacct gccctcggtg gacgtgctct tcgcctcggc
     1021 agcggaggcc tgtggtcccc acgccctggg cgtgatcctc acgggcatgg gcgacgacgg
     1081 ggcgcggggc ctgcttcaga tgcgccagaa aggcgcccgt accctgggcc aggacgaagc
     1141 cacctgcgtg gtgtacggca tgcccagggc cgcctggtcg cgcggagctg tcgaaaccca
     1201 gctgcccctc ggcgacatcg cgggacacct ggtggcctgg tgccagcgtg aacactgagt
     1261 ccgcgactcc ctccgaaggt tccggcgccc ccccgaaggc ccggcgggcc aagctggtga
     1321 cttccagggc cttcctcgtc ctgttcggca tttggtccgt gatcgtcgcg atcttcatcg
     1381 tggtgatcct cattttttcg ttcagcgagt acaagcagat cgccctcgcc cgggccgtgg
     1441 acagctacca caaggacctg gtggtccgcc gctgggcttc ggagcgcggc ggggtctatg
     1501 tccctttgga cgacaagacc ccgcccaacc cctatctggc gcaccgggcg gaccgggacg
     1561 tcaccacgac ggacgggaag cgcctgaccc tcgtcaaccc ggcctacatg acacggatgg
     1621 tccacgagct gggccaggac gcgtacggat tgcgcgggca catcaccagc ctgactccca
     1681 tccggcccga caacgcgccc gacgcctggg agcggaaggc cctggaatcc ttcgagaagg
     1741 gcggccggaa ctacttcgag gtggtgcagg agaaggatca gaaggtcctg cgatacatgg
     1801 gcgcctttct cgtcgagaag agctgcctct catgccatgc ccaccagggc taccaggtgg
     1861 gggacgtgcg cgg
//
LOCUS       DATGWW010000014         1913 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_1445, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000014 DATGWW010000000
VERSION     DATGWW010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1445"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1008
                     /locus_tag="VK150_00180"
     CDS             <1..1008
                     /locus_tag="VK150_00180"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP29742.1"
                     /translation="DEAKLRQVLVNLVGNAVKFTVEGSVSLRVGYSAGHAAFTVADTG
                     PGISEGDQKQLFQPFFQAGNHPLAAEGTGLGLHISRSLVRLMGGDLALESRLGEGSRF
                     TFELPMPEGEAPLEFEDRGRVIGLEPGQRKVTMLVVDDRMENRDLLVRLLSTVGFQVL
                     SAADGLEAVELWERHHPELVWMDLRMPRMSGFEAIQVIRGQELERGLPHTFVVAISAS
                     VIDLDRDALRLAGFDDFIGKPFREAQLFDLAERWLGLRFITRAHDAAAQAVPVGELAE
                     GLRAQPDAWRSDLREAVLTGDIEAALALVDRLEGGGPAAGLRHLLRGYKLQELLDLLN
                     A"
     gene            1025..>1913
                     /locus_tag="VK150_00185"
     CDS             1025..>1913
                     /locus_tag="VK150_00185"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HLP29743.1"
                     /translation="MLVPQGDILIVDDNPDNLDLLGTVLREQQYRVRAVPSGAMALEA
                     ARRHPPELVMLDVNMPGMDGYATCEAFKADARLASIPVIFISALDDPLDKVKAFKVGG
                     RDYVTKPFSTAEVLVRVEHQVNLARLQRELEIQNQNLVDANLKLKEVNTLKTNFTAML
                     VHDLRSPLTFLGLALDSLRTGVGNRDELLDRSEQSFNRIRTLLDEMLEIYRSESGQLP
                     MSFGNVDPTLWLTTVLSPYHLRAAKAGVEFQQVVPPDLPAIQGDRPKLDRALVNLVDN
                     AFKFTPRGGAVRVEATLEHG"
BASE COUNT          305 a          649 c          662 g          297 t
ORIGIN      
        1 gacgaggcca agctccgcca ggtgctcgtg aacctggtgg gcaacgccgt gaagttcacg
       61 gtggagggct cggtcagcct gcgggtgggc tactcggccg gccacgccgc cttcaccgtg
      121 gcggacacgg gtccgggcat ctccgagggt gatcagaagc agctcttcca gcccttcttc
      181 caggccggga accatcccct ggccgccgag gggaccgggc tgggcctgca tatcagccgg
      241 tccctcgtgc gcctcatggg cggggacctg gccctggaga gccggctggg ggaaggcagc
      301 cggttcacct tcgagctgcc catgcccgaa ggcgaggcgc ccctggaatt cgaggaccgg
      361 ggccgggtca tcggcctgga gccggggcag cggaaggtga cgatgctggt ggtggacgac
      421 cgcatggaga accgcgacct gctcgtacgc ctgctcagca ccgtgggctt ccaggtgctc
      481 agcgccgcgg acggcctgga agcggtggaa ctgtgggagc ggcaccatcc tgaacttgtc
      541 tggatggacc tgcgcatgcc ccgcatgagc ggtttcgagg ccattcaggt gatccgcggg
      601 caggagctgg agcgagggct gccgcacacc ttcgtggtgg cgatctcggc cagcgtcatc
      661 gacctggacc gggatgccct tcgcctggcg ggcttcgacg acttcatcgg gaagcccttc
      721 cgggaggccc agctcttcga cctcgccgaa cgctggctgg gcctgcggtt catcacccgg
      781 gcccacgatg cagcggctca ggccgtgccc gtgggtgaac tggccgaggg cctgcgcgcc
      841 caacccgacg cctggcggtc cgacctgagg gaggcggtgc tgaccggcga catcgaggcg
      901 gccctggcgc tggtcgaccg gttggagggc ggcggtcccg ccgcgggctt gcgccacctg
      961 ctccggggct acaagctcca ggaactgctc gacctcttga acgcctgatc caaggagtga
     1021 ccccatgctg gttccccagg gcgacatcct catcgttgac gacaaccccg acaacctgga
     1081 cctcctgggc accgtccttc gtgagcagca gtaccgggtg cgggcggtcc cctcgggcgc
     1141 catggccctg gaggccgcgc ggcggcatcc acccgaactg gtgatgctcg acgtgaacat
     1201 gcccgggatg gatggctacg cgacctgcga ggccttcaag gccgatgccc ggctggcgtc
     1261 catccccgtg atcttcatca gcgcgctcga cgatccgctg gacaaggtga aagccttcaa
     1321 ggtgggcggc cgcgactacg tgaccaagcc cttcagcacc gcagaggtgc tggtccgggt
     1381 ggagcatcag gtgaacctgg cccggctcca gcgcgagctg gagatccaga accagaacct
     1441 ggtggacgcc aacctcaagc tgaaagaggt gaacaccctc aagacgaact tcacggccat
     1501 gctggtgcac gacctgcggt cgcccctcac cttcctgggg ctggccctgg acagcctccg
     1561 cactggggtg ggcaaccggg acgagctgct cgaccggtca gagcaatcct tcaaccggat
     1621 ccgcacgctg ctcgacgaga tgctggagat ctaccgcagc gagagtggcc agctgcccat
     1681 gtcctttggc aacgtggatc ccaccctgtg gctcacgacc gtgctgtcgc cgtaccacct
     1741 ccgcgccgcc aaggccgggg tggagttcca gcaggtcgtc ccgccggacc tgccggccat
     1801 ccagggggac cggcccaagc tggaccgggc cctggtgaac ctcgtggaca acgccttcaa
     1861 gttcaccccc cggggcggtg cggtgcgggt ggaggccacc ctggagcacg gct
//
LOCUS       DATGWW010000015         1905 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_1653, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000015 DATGWW010000000
VERSION     DATGWW010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1653"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1905
                     /locus_tag="VK150_00190"
     CDS             <1..>1905
                     /locus_tag="VK150_00190"
                     /inference="COORDINATES: protein motif:HMM:NF019323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MG2 domain-containing protein"
                     /protein_id="HLP29744.1"
                     /translation="VLARSGASFAILASEGQSAAAVRQRLYAFTERPLYRPGQEVFVK
                     AILRRVEEGENRVASGTQALPFTVLDPEDTKVTEGQAKLLNAETGTYAAQFNLPGAGR
                     LGLYRVVFQGPQGPGQAEFKVEQFVKPAFEVKVTTEKTKVGLGDALNFHANARYFYGA
                     AVRGAKADWFLYKVVPPKARWIWDDEDSGPAPELMESGQLDLDDEGQADLPVFKAESD
                     GLWRMVVKVADASGQRNSGQAQVRAAAGDLVLMIAADRQVALPGKPFQVTARALDLDG
                     KEVPGVAIGLRAARIVAQKDSAWWWSRPNALKPGETVASAPGPQAMLTIPEGGAFLLV
                     AEAKDSKGRPVTAQRQITVAAEGTPLPAVPDLRAAADKPEYQPGDTARVLVQLPRPKL
                     TLHWALEHEVLGQRQTRLVQGTTALVDIPVTAAMQPNVWAVFEIVAEGRRQMVEVPLR
                     VPKRDRRLQVAVTTDKERYQPGQPMKVSVEVKDATGRPTPADLSVGVVDEAIYALSQE
                     LHPDPVRFFHPTRRHGVLRSGSTDWSFHDLLRRQRPVWSLKQTKRGEFKADDDDKVRQ
                     NFKDTAHWAPFVAAGRDGKASVDLVLPDNLTAWRATATAVTADTKVGVGRASKPASKP
                     LQVALTLPRTL"
BASE COUNT          303 a          674 c          686 g          242 t
ORIGIN      
        1 gtgctggccc ggagcggcgc cagcttcgcc atcctcgcca gcgaagggca gagcgcggcc
       61 gcggtgcgtc agcggctcta cgccttcacg gagcggcccc tctaccgccc cggccaggag
      121 gtgttcgtga aggccatcct ccggcgcgtg gaggagggcg agaaccgcgt ggccagcggg
      181 acccaggcgc tacctttcac cgtgctcgat cccgaggaca cgaaggtcac cgagggccag
      241 gcgaagctgc tgaacgccga aaccgggacg tacgccgcgc agttcaacct gcccggcgcg
      301 ggccgcctgg gcctctaccg ggtggtgttc caggggcccc aggggccggg ccaggcggag
      361 ttcaaggtcg agcagttcgt gaagcccgcc ttcgaggtga aggtgaccac cgagaagacc
      421 aaggtgggtc tgggcgacgc gctgaatttc cacgcgaacg cccgctactt ctacggcgcc
      481 gcggtgcggg gcgccaaggc cgactggttc ctctacaagg tggtgccgcc caaggcccgc
      541 tggatctggg atgacgagga ctccggcccg gccccggagc tgatggaaag cggccagctg
      601 gacctggacg acgagggtca ggccgatctg cccgtcttca aggccgaaag cgacgggctg
      661 tggcgcatgg tcgtgaaggt cgccgatgcc tcgggccagc gcaacagcgg ccaggcccag
      721 gtgcgcgccg ccgcggggga cctggtgctg atgatcgccg ccgaccggca ggtggcgctg
      781 cccgggaagc ctttccaggt gacggcgcgg gccctcgacc tcgacgggaa ggaggttccg
      841 ggcgtggcca tcggcctccg ggcggcccgt atcgtggccc agaaggacag cgcctggtgg
      901 tggtcccgtc ccaacgccct caagcccggc gagaccgtgg cctcggcccc gggtccccag
      961 gccatgctga ccattcccga aggcggggcc ttcctgctgg tggccgaggc gaaggattcg
     1021 aaaggcaggc ccgtgacggc ccagcgccag atcaccgtgg ccgccgaagg gacgcccctg
     1081 ccggccgtgc cggacctgcg cgccgcggcg gacaagcccg aataccagcc cggcgacacc
     1141 gcccgagtgc tcgtgcagct gccccggccc aagctcacgc tgcactgggc cctcgagcac
     1201 gaagtcctgg gccagcggca gacgcgcctg gtgcagggca ccaccgccct ggtggacatc
     1261 cccgtgaccg cggccatgca gcccaacgtg tgggccgtgt tcgagatcgt ggcggagggc
     1321 cgccgccaga tggtggaagt gcccctccgc gtgccgaagc gggaccgccg cctgcaggtg
     1381 gcggtgacca cggacaagga gcggtaccag cccggccagc ccatgaaggt gtccgtggaa
     1441 gtgaaggatg ccaccggacg cccgacgcca gccgacctca gcgtgggcgt ggtggacgag
     1501 gccatctacg ccctgagcca ggagctgcac ccggatcccg tgcgcttctt ccaccccacg
     1561 cgccgtcacg gcgtgctgcg ctcgggctcc accgactgga gcttccatga cctgctgcgc
     1621 cggcagcggc ccgtgtggag cctcaagcag acgaagcgcg gcgagttcaa ggccgatgac
     1681 gacgacaagg tgcgccagaa cttcaaggac acggcccact gggcgccctt cgtggccgcg
     1741 ggccgcgacg ggaaagccag cgtggacctg gtgttgccgg acaacctcac cgcctggcgt
     1801 gccaccgcca cggcggtgac ggccgatacg aaggtgggcg tgggacgggc ttccaagccc
     1861 gcctccaagc ccttgcaggt ggccctcacc ctgccgcgca ccctc
//
LOCUS       DATGWW010000016         2435 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_136630, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000016 DATGWW010000000
VERSION     DATGWW010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136630"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1485)
                     /locus_tag="VK150_00195"
     CDS             complement(<1..1485)
                     /locus_tag="VK150_00195"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HLP29745.1"
                     /translation="MAAESTQALLATELVPSGQLVTFTLDGVEFGLDIDRVQEITHRT
                     DVTPVPGSPSFILGVINLRGLIIPVMDSRVRFHLAPQETTPKTRIIVLRLASGPTGLQ
                     VDSVAEVVRLEDHTLRETPPLVAGIRSEYLAGMVTVGNRLITLIHLEKLLDSSELSRR
                     AELEDLGMAGTIGSGEATEEEVEEDGRPFVTFRLGAESFGIALHEVEEIVELPPVTKV
                     PDAPDYVLGVICLRDQVMPLVDLSEILSIQQGDAERKRDMVVLLSFGTARIGVVVDEI
                     QEILRVLDGQTLPPPQTLSEAEREHLEGILLLPGRMVSLINVLKIITGDDQEKIAAMG
                     QGLGLADTRAQETVPSLELVVFRLGPESYGLRLHEVREIIMVGQITPVPRAPHFVDGV
                     LNLRGEVMPVVDLRTRFGLERVEPTSISRILITSIGGVFTGLVVDAVDEVRPVELNRF
                     GPPPAVTAVGANRYIEKVARLDNGMIFLLELQQLLTDAETEQLQG"
     gene            complement(1489..2106)
                     /locus_tag="VK150_00200"
     CDS             complement(1489..2106)
                     /locus_tag="VK150_00200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29746.1"
                     /translation="MDQSEIDALLAGGGKPSKKPKAAAKAPAPAPAPAPAPAPVAPRR
                     PSLDEPQKDGAGHVISELDTVTSVTERESNKVMDQLDQISRLVSRQQQLITDMMTHEG
                     AQSPGAQQAIHEVMSAGKEIQDKVFEAMDLMQFQDITRQKLERIVHHLRQIHDYIVDL
                     LGTGLKSEAERPSISHTIAQTGTTPDENKAHADAVIEAFKQQKKG"
     gene            complement(2117..>2435)
                     /locus_tag="VK150_00205"
     CDS             complement(2117..>2435)
                     /locus_tag="VK150_00205"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP29747.1"
                     /translation="RIIINTLSRIGYTDVVEGENGKNGLEKLGQGGVEMIITDWNMPE
                     MDGLEFVKTVRGQNPAIPILMVTTNAAKEDIVEALQAGVNNYVVKPFTPETLKEKIES
                     LLG"
BASE COUNT          344 a          763 c          877 g          451 t
ORIGIN      
        1 gccctggagc tgctcggtct ccgcgtcggt caggagctgc tgcagctcga gaaggaagat
       61 catgccgttg tccagccgcg ccaccttctc gatgtagcgg ttggcgccca cggcggtgac
      121 ggccgggggc gggccgaagc ggttcagctc cacggggcgg acttcgtcca ccgcgtccac
      181 cacgaggccc gtgaagaccc cgccgatgct cgtgatgagg atgcgggaga tggacgtggg
      241 ttcgacgcgt tccaggccga agcgggtccg caggtccacc acgggcatca cctcgccacg
      301 caggttcagc accccgtcga cgaagtgggg ggcgcggggc accggcgtga tctggcccac
      361 catgatgatc tcgcgcacct cgtggaggcg aaggccgtag ctttccgggc cgaggcggaa
      421 gaccaccagc tccaggctcg ggacggtctc ctgggcccgg gtgtcggcga ggccgaggcc
      481 ctggcccatg gcggcgatct tctcctggtc gtcgccggtg atgatcttca gcacgttgat
      541 gaggctcacc attcggccgg gcaggaggag gatgccttcc aggtgctccc gctcagcttc
      601 ggagagggtc tggggcggcg gcagggtctg gccgtccagc acgcggagga tctcctggat
      661 ctcgtcgacc accacgccga tccgggccgt gccgaaggac agcagcacga ccatgtcgcg
      721 cttgcgctcg gcgtcgccct gctggatgga gaggatctcc gagaggtcca ccaggggcat
      781 gacctggtcg cggaggcaga tgacccccag cacgtagtcc ggggcgtcgg gcaccttggt
      841 gaccggcggc agctcgacga tctcctccac ctcgtggagg gcgatgccga aggattccgc
      901 gccgagacgg aaggtcacga agggccggcc atcctcctcg acttcctctt cagttgcctc
      961 gcccgagccg atggtcccgg ccatgccgag atcctccagc tcggcccggc gggagagctc
     1021 ggagctgtcc agcagcttct ccaggtggat gagggtgatg aggcggttcc cgaccgtgac
     1081 catgccggcc aggtattcgg agcggatgcc cgcgacgaga ggcggggtct cccggagggt
     1141 gtggtcctcg aggcgcacca cctcggccac agaatccacc tgtaggccgg tgggcccgct
     1201 ggccaggcgc agcacgatga tccgggtttt cggggtggtc tcctgggggg cgaggtggaa
     1261 ccggacccgg ctgtccatga cggggatgat gaggccccgc aggttgatga cgccgaggat
     1321 gaagctgggg ctgccgggca ccggggtgac gtcggtccgg tgggtgatct cctggacccg
     1381 gtcgatgtcc aggccgaact ccaccccatc cagggtgaag gtcaccagct ggcccgaagg
     1441 caccagctcg gtggcgagga gcgcctgggt ggactcggcg gccatggctt accccttctt
     1501 ctgctgcttg aaggcctcga tcaccgcgtc cgcatgggcc ttgttctcgt cgggcgtggt
     1561 gccggtctgg gcgatggtgt ggctgatgga aggccgctct gcttcgctct tcaggcccgt
     1621 gcccagcaga tcgacgatgt agtcgtggat ctggcgcagg tgatggacga tgcgttccag
     1681 cttctggcgg gtgatgtcct ggaactgcat caggtccatg gcctcgaaga ccttgtcctg
     1741 gatctccttg ccggcgctca tgacctcgtg gatggcctgc tgggcccccg gcgactgggc
     1801 gccctcgtgg gtcatcatgt cggtgatgag ctgctgctgg cgggagacca ggcggctgat
     1861 ctggtcgagc tggtccatga ccttgttgga ctcgcgctcc gtcaccgagg tgacggtgtc
     1921 cagctcggag atgacgtggc cggcaccatc cttctgcggc tcgtcgaggc tgggccggcg
     1981 gggggccacg ggcgcaggcg caggcgcagg cgcgggtgct ggtgcggggg ccttggccgc
     2041 cgccttgggc ttcttggatg gtttgccgcc tccggcgagg agggcatcga tctcggactg
     2101 gtccatggcc tgctccctac cccaggaggg attcgatctt ttccttgagg gtctccgggg
     2161 tgaacggctt caccacgtag ttgttcacgc cggcctggag ggcttcgacg atgtcctcct
     2221 tggcggcgtt ggtggtgacc atgaggatcg gaatggccgg attctggccc cggaccgtct
     2281 tcacgaactc gaggccatcc atctcgggca tgttccagtc ggtgatgatc atttccaccc
     2341 cgccctggcc gagcttctcg agcccgttct tgccgttttc accctcgacc acgtcggtgt
     2401 agccgatgcg ggacagggtg ttgatgatga tgcgc
//
LOCUS       DATGWW010000017         2076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_1861, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000017 DATGWW010000000
VERSION     DATGWW010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1861"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..1871
                     /locus_tag="VK150_00210"
     CDS             141..1871
                     /locus_tag="VK150_00210"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: protein motif:HMM:NF010052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HLP29748.1"
                     /translation="MKTFGFKIDPLTGEDYYEVFVRGRQLLNDPHLNKASAFTKEERL
                     SLGLDGMLRPGISTLESQLDRTYEAYQRKSDDLERYIYLIGLQDRNEVLFYQLLMDHL
                     DEMVPIVYTPTVGQACLQMSHIQRRYRGIYITPENIGNIDQIFQGLSQPQVNLIVVTD
                     GERILGLGDLGSDGMGIPVGKVSLYVAAGGVHPAVCLPVSLDVGTNNPRLLEDPLYLG
                     IRKPRLRGAEYEELVEKFILGVKRNFPGALLQWEDFAKQTAFKNLDRYRERILSFNDD
                     IQGTGSTALAAMMTAMRIKKSRFQDERYVIVGMGQAGTGIAMNIRAMLKEEGLTDEEA
                     RKRIFAVDMQGLLIEGDPLLEGPQEPLAQRRAAVDGWKLDDPSRIGLQDVVRNAHPTV
                     LIGVTAQPGLFSEAILAETAKHSERPIVLALSNPTHKCECSPEAVWKATNGKGLVATG
                     SPFSPMDWNGRTLQASQCNNMYIFPGVGLGALVCKASRVTDGMFLAASKAISRFVTPE
                     QEALGLLLPEMKDIRKVSLAVATAVGIEARNAGLGRLLDDDQLAAIVTKAQWEPKYSA
                     YRPGTPVVAS"
BASE COUNT          360 a          721 c          682 g          313 t
ORIGIN      
        1 ctgctggcag ggcccgccgc gccgatgtga tccagtcgcg gaccgggcac ggatacactg
       61 gcccgacgcg cggttcccgc aggatgcgaa ccctggaggg gaccgtaccc aggccggggc
      121 gccgggcgaa aggggctctc atgaagacgt tcgggttcaa gatcgaccca ttgaccggcg
      181 aggactacta cgaggtcttc gtccgcggcc gccagctgct gaacgacccg cacctgaaca
      241 aggcctcggc gttcaccaaa gaggagcgcc tcagcctggg cctggacggc atgctgcgtc
      301 ccgggatctc gaccctggaa tcccagctcg accgcacgta cgaagcctac cagcgcaagt
      361 ccgacgacct tgagcgctac atctacctca tcggcctcca ggaccgcaac gaggtgctct
      421 tctaccagct gctgatggac cacctcgacg aaatggtgcc catcgtctac acgcccaccg
      481 tgggtcaggc ctgcctccag atgagccaca tccagcgtcg gtaccggggc atctacatca
      541 cgcccgagaa catcggcaac atcgatcaga tcttccaggg cctctcgcag ccccaggtga
      601 acctcatcgt ggtgacggac ggcgagcgca tcctgggcct gggcgacctg ggctccgacg
      661 gcatgggcat ccccgtgggc aaggtcagtc tctacgtggc ggcgggcggc gtccacccgg
      721 cggtgtgcct gccggtcagc ctcgatgtgg gcaccaacaa tccccgcctg ctcgaggacc
      781 ccttgtatct gggtatccgc aagccccgcc tccgcggcgc agagtacgag gagctggtgg
      841 agaagttcat cctcggcgtg aagcgcaact tccccggcgc cctgctgcag tgggaggact
      901 tcgccaagca gacggccttc aagaacctgg accgctaccg ggagcgcatc ctctccttca
      961 acgacgacat ccagggcacg ggttcgaccg ccctggcggc catgatgact gccatgcgca
     1021 tcaagaagag ccgcttccag gacgagcgct acgtcatcgt gggcatgggc caggccggca
     1081 ccggcatcgc gatgaacatc cgggcgatgc tgaaggagga gggactcacc gatgaggagg
     1141 cccgcaagcg gatcttcgcg gtggacatgc agggcctgct catcgagggc gatcccctgc
     1201 tggaaggccc ccaggaaccc ctggcccagc gccgcgcggc ggtggacggc tggaagctgg
     1261 atgatcccag ccgaatcggc ctgcaggatg tggtgcgcaa cgcccacccg acggtgctga
     1321 tcggcgtcac ggcgcagcct gggctgttca gcgaggccat cctggccgag accgccaagc
     1381 attcggagcg ccccatcgtg ctggcgctct ccaacccgac ccacaagtgc gagtgctcgc
     1441 cggaggcggt ctggaaagcc acgaacggca aggggctggt ggccaccggc agcccgttct
     1501 cgcccatgga ctggaacggc cgcacgctgc aggcctcgca gtgcaacaac atgtacatct
     1561 tccccggcgt gggcctcggg gcgctcgtct gcaaggcctc ccgggtcacg gacggcatgt
     1621 tcctggcggc cagcaaggcc atcagccgct tcgtgacgcc ggagcaggag gccctcggcc
     1681 tgctgctgcc ggagatgaag gacatccgga aggtctcact ggccgtggcc acggcggtgg
     1741 gcatcgaggc ccgcaacgcg ggcctggggc gtctgctgga cgacgaccag ctggcggcca
     1801 tcgtcaccaa ggcccagtgg gaacccaagt actccgccta ccggcccgga accccggtcg
     1861 tggcgagctg acatgccgga ggcgcttccc ccttgagggg aggcgtccca ggcctagcat
     1921 ggggggcggg aagagtccct ctttcctccc atggggcgac cgttttcgcc agccccttcc
     1981 ggcccatgca ccacccggcc gagactcctg ggcacccttc ggggtgccct tttgttcgtc
     2041 ccgggggtcc ccctcgcaac gcatgcgttg cgaggg
//
LOCUS       DATGWW010000018         1893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_2119, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000018 DATGWW010000000
VERSION     DATGWW010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2119"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..770)
                     /locus_tag="VK150_00215"
     CDS             complement(<1..770)
                     /locus_tag="VK150_00215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29749.1"
                     /translation="MKKRELADAPVTGSAILHSFGFWIPMHTFKRKAAIRIAVASLAL
                     AMIASPLAWFVSREKAEESLVSFAMEESHRVILHQDTASPVSPYGRAQAEASARTLAG
                     GLFEIAEIYGPDGLKLTEAMTAEGEILERDLPPHVAPHYQASHYESRKLAGDRWVLRV
                     FVPLRAMDGNLLGYFEGVRLIPDWQRRQIMSDAMAVALMVGLASLICGGVLYPIVIRL
                     VSENERKAQQVLEAQLAMMEALGRAIAKRDSDTGAHNYR"
     gene            853..>1893
                     /locus_tag="VK150_00220"
     CDS             853..>1893
                     /locus_tag="VK150_00220"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HLP29750.1"
                     /translation="MARIEREWQAEHEGAALASELHKVMVISHRQAKGFIDGHCVTVN
                     GEMAQKHGLRLKAGDTIKVAFDPEQTYEVLPPARKLQSGPFETLWEDTHLLFVFKPAG
                     LLTVPTEQAGEPSLAEAITESFRRRGFKRFNLFIVHRLDRFTSGVLVFAKTPEALHGL
                     KKHFELHRLQRVYRAILVGDLPENSGTLAGHLIEHAKSLKMSVAVARKGPGGGKRMPA
                     GAKEAVTHYRVVERLPGHTVVEVKLETGRRNQIRVQFADRGFPLLGDQVYGTESPLLD
                     RQALHAELLGFKHPVTDEQVTVTAPMPADMEAALKALRNQARIQRATTGVKGEEGIYQ
                     PTESRDHKLKRVA"
BASE COUNT          354 a          650 c          592 g          297 t
ORIGIN      
        1 cggtagttgt gggcgcccgt gtctgaatcg cgcttggcga tggctcgccc cagagcctcc
       61 atcatggcca gctgggcttc cagcacctgt tgggccttcc gttcgttctc ggacacaagg
      121 cgaatcacga tcggatagag caccccgccg cagatcaggg acgccaagcc aaccatcagg
      181 gccaccgcca tggcatccga catgatctgc ctgcgctgcc agtccgggat gagacgcacc
      241 ccttcgaagt agccaaggag attcccatcc attgcccgga gaggcacgaa caccctcagc
      301 acccatcgat cgccggccaa tttccggctt tcgtagtggg acgcctgata gtgcggggcg
      361 acatgcggag ggaggtcccg ctctaggatt tcgccctcgg ccgtcatggc ctccgtcaac
      421 ttgagtccat cgggaccata aatctcggcg atctcgaaca accctccagc cagggttcgc
      481 gccgaagctt cggcctgggc ccttccataa gggctgacgg gtgacgctgt gtcctggtgc
      541 agaatcaccc tgtgggattc ctccatagca aaggacacca ggctctcctc cgccttctcg
      601 cgcgagacaa accaggcaag tggactcgcg atcatggcca gggccagcga tgcaaccgcg
      661 atccggatcg cggccttgcg tttgaaggtg tgcatgggaa tccagaagcc aaaggagtgc
      721 agaattgcgg agccggtgac tggcgcatcg gccaactcgc gctttttcat tagatttcaa
      781 ggcctttccg tggtctgctg gtggtccgct cggcgtttgc aaggacgcgg ggcgatgacg
      841 gagggcggag ccatggcacg catcgaacgg gagtggcagg cggaacacga gggcgcggcc
      901 ctggcctcgg aactccacaa ggtgatggtc atcagccatc gccaggccaa gggcttcatc
      961 gatggccact gcgtcaccgt gaacggcgag atggcccaga agcacggcct gcgcctgaag
     1021 gcgggcgaca ccatcaaggt ggccttcgac ccggagcaga cctacgaggt gctgcctccc
     1081 gcccgcaagc tccagtcggg gcccttcgag accctgtggg aggacaccca ccttctgttc
     1141 gtcttcaagc ccgcaggctt gctcacggtg cccaccgagc aggccgggga gcccagcctg
     1201 gcggaagcca tcaccgaatc cttccggcgt cgcgggttca agcgcttcaa cctcttcatc
     1261 gtccaccggc tcgaccgctt caccagcggt gtgctggtct ttgcgaaaac ccccgaggcc
     1321 ctgcacggcc tgaagaagca cttcgagctg caccgcctcc agcgcgtcta ccgcgccatc
     1381 ctggtgggcg acctgcccga gaacagcggc accctggcgg gacacctcat cgagcacgcc
     1441 aagtcactga agatgtccgt ggctgtggcc cgcaagggac cgggcggcgg caagcgcatg
     1501 cccgccggtg ccaaggaggc cgtgacccac taccgcgtgg tggagcgcct gccggggcac
     1561 accgtggtgg aagtgaagct ggaaaccggc cgccgcaacc agatccgcgt gcagttcgcc
     1621 gaccgcggct tccccctgct gggcgaccag gtctacggca ccgagagccc cctgctggac
     1681 cgccaggccc tccacgcgga gctgctggga ttcaagcacc ccgtcaccga cgagcaggtc
     1741 accgtcacgg cccccatgcc cgcggacatg gaagcggccc tcaaggcgct ccgcaaccag
     1801 gcccgcatcc agcgcgccac caccggcgtg aagggtgagg agggcatcta ccagcccacc
     1861 gagagccgcg accacaagct caagcgggtg gcc
//
LOCUS       DATGWW010000019         2316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_408991, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000019 DATGWW010000000
VERSION     DATGWW010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408991"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..1711
                     /locus_tag="VK150_00225"
     CDS             137..1711
                     /locus_tag="VK150_00225"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HLP29751.1"
                     /translation="MRTNLPITQREHHIQEGTFVVSKTDLAGVITYVNAEFVRISGFR
                     EDELLGAPQNLVRHPDMPAAAFEDLWKTVKAGQHWHGLVKNRSKNGDFYWVDAAVSPI
                     IDAGKVVGYVSIRSRPTRAQIEQAEHTYSLLNQGKTLEATYHRPFVPFPGLSLRHRIL
                     GTLGAAMLAMLLALAVGFGIGGPWAIGLGTVMGLASGAGLGMLLDQTMQAEFGGDPSA
                     AMTAFRAMAQGDLSTNIATRNGDVSSLMAHTRALQQRVKSMVNRMRFEATEVASGAEA
                     LSASTLQMSSATEEIARSTEGQRAASENLASAITELSASVSEVASNTRQGQRQAEEAV
                     QAALQGDRAGEAALSAMAQVEGATAEVVKAVQVIQEIARQTNLLSLNAAIEAAHAGQV
                     GKGFAVVAEEVRKLAERSSSAAEEISHLIEASNRAVQSGRATVQEAVEALDQIRERIG
                     TLQSLTLEISGATEEQASTSAEVAHQVEEGAQVAIKNAASTLQLSVTVEATSRTTRDQ
                     ARIAHGLLDLVDQFKV"
     gene            1773..>2316
                     /locus_tag="VK150_00230"
     CDS             1773..>2316
                     /locus_tag="VK150_00230"
                     /inference="COORDINATES: protein motif:HMM:NF013765.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29752.1"
                     /translation="MSTPMMQQIAGLKREAGDAVLLTRMGDFYEILGEDAVRAAPVLE
                     IALTLRGKGTDGETPMCGVPHFALESYLPKLLAAGFSAAIAEPTAKAEEVKGLLPRAI
                     KRIITPGTWLDDDARWLCALHRSGAAWGLALLQLASGALRVLPGEGDEALRATLERLD
                     PQELILAEGAEDIPELEASRT"
BASE COUNT          380 a          843 c          775 g          318 t
ORIGIN      
        1 acgctccatt gcttatagac ccctgtgtcc agaattttaa actcattggt ggcgctgggg
       61 aatcgatacg gcacctagcc tggatgaccg gccactggat gtccgtctac ctgcccacga
      121 ggagaagcac cccttcatgc gaacgaacct ccccatcacc cagcgagagc atcacatcca
      181 ggaggggacc ttcgtcgtct ccaagaccga cctggccggc gtcatcacct acgtgaacgc
      241 cgagttcgtg cggatcagcg gcttccgcga ggacgaactg ctcggcgcgc cccagaacct
      301 cgtgcggcat cccgacatgc ccgcggcggc cttcgaggat ctgtggaaga cggtgaaggc
      361 gggccagcac tggcacggcc tggtcaagaa ccgcagcaag aacggcgact tctactgggt
      421 ggacgccgcg gtctccccca tcatcgatgc cggcaaggtg gtgggctacg tctccatccg
      481 cagccgaccg acgcgggccc agatcgagca ggccgagcac acctacagcc tgctgaacca
      541 ggggaagacc ctggaggcca cgtaccacag gcccttcgtg ccctttccgg gcctcagcct
      601 ccgccaccgc atcctgggca ccctcggtgc ggccatgctc gcgatgctcc tggccctggc
      661 cgtgggcttc ggcatcggcg gcccctgggc catcggcctc ggcacggtga tgggcctggc
      721 ttcgggcgct ggtctgggca tgctgcttga ccagaccatg caggccgagt tcgggggcga
      781 tccctctgcg gccatgaccg ccttccgcgc catggcgcag ggggacctct ccaccaacat
      841 cgccacgcgg aacggcgacg tgagcagcct gatggcccac acccgggccc tgcagcagcg
      901 ggtgaagagc atggtgaacc gcatgcgctt cgaggcgacg gaggtggcct ccggcgccga
      961 ggccctgtcc gcctccacgc tccagatgtc cagcgccacc gaagaaatcg cccgcagcac
     1021 cgaggggcag cgcgccgcct ccgagaacct ggcctcggcc atcaccgagc tgtcggcttc
     1081 cgtgagcgag gtcgcttcga acacccgcca gggccagcgc caggccgagg aggccgtgca
     1141 ggccgccctg cagggcgacc gggccggcga ggccgcgctg tcggccatgg cgcaggtgga
     1201 gggagccacc gccgaagtgg tgaaggcggt ccaggtcatc caggagatcg cccgccagac
     1261 caacctgctc agcctcaacg ccgccatcga ggcggcccac gcgggccagg tgggcaaggg
     1321 tttcgccgtg gtggccgagg aagtccgcaa gctcgcggaa cgctcctcgt cggccgccga
     1381 ggagatcagc cacctgatcg aggcctccaa ccgcgccgtg cagagcggcc gggccacggt
     1441 gcaggaggcc gtggaggccc tcgaccagat ccgcgagcgc atcggcaccc tgcagtccct
     1501 cacgctggag atctccggcg ccaccgagga gcaggccagt accagcgccg aggtggccca
     1561 ccaggtggag gagggggccc aggtggccat caagaacgcc gcctccaccc tccagctctc
     1621 cgtcaccgtg gaagccacct cccgcaccac ccgcgaccag gcccgcatcg cccacggcct
     1681 gctcgacctc gtggatcagt tcaaggtctg agcgagtctg tgggaagatc ggggattcgc
     1741 cttccccgat ttccgacgag ccgacccccc gaatgtccac cccgatgatg cagcagatcg
     1801 ccggcctcaa gcgcgaggcg ggcgacgccg tgctgctcac gcgaatgggg gatttctacg
     1861 agatcctggg cgaggacgcg gtgcgggcgg cgccggtgct ggagatcgcc ctcaccctgc
     1921 ggggcaaggg cacggatggc gagaccccca tgtgcggggt gccgcacttc gccctggagt
     1981 cgtacctgcc caagctgctg gcggcgggct tctccgcggc catcgccgag cccacggcca
     2041 aggccgagga ggtgaagggc ctgctgcccc gggccatcaa gcgcatcatc accccgggca
     2101 cctggcttga tgacgacgcc cgctggctct gcgcgctgca ccgctccggg gccgcctggg
     2161 gcctggccct gctgcagctg gcctcggggg cgctgcgcgt gctgcccggg gagggcgacg
     2221 aggccctgcg cgccacgctg gagcgcctcg accctcagga gctcatcctc gccgaaggcg
     2281 ccgaggacat ccccgagctg gaggcctccc gcaccc
//
LOCUS       DATGWW010000020         1564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_409104, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000020 DATGWW010000000
VERSION     DATGWW010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_409104"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            344..>1564
                     /locus_tag="VK150_00235"
     CDS             344..>1564
                     /locus_tag="VK150_00235"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HLP29753.1"
                     /translation="MPLTPHRTLTPEGTEILIEPLPHVRSCAVGFWVRRGSRHEGPQE
                     EGLAHFLEHTVFKGTEAYPTPDELAAATDRLGGHVDAFTGKEVACFYGKVLSDQLPDL
                     VHLLGELVTSPRFDTDELVRERGVILEEIAQSEDQPDDWVSELFYGGFWEGTPLAHPI
                     LGRRDQVAGYGPAEARTFFDHTYRAPNLVIAAAGALEPESFLDLLRPILGRLPVGTAQ
                     AASAASRTRPFLLNVPRKDLQQANLVMGFPAPDHRSPDRAAAHLLSHVLGGGMASRLF
                     MELRERRGLCYQVGSYLSPYADTGALQITASCAPAQLRELVKRTMAECARVRDKGVEA
                     DELERAKLQARTGLVFSQESSSSRMFSLAHQAVHHGELRSLDQQMAEIEAVTQNDLLR
                     VAQDLLDPAQLGLSA"
BASE COUNT          228 a          562 c          534 g          240 t
ORIGIN      
        1 gaaaaacggg atggtggccg gtttgggggc atcgctcctc aagcgtgggc tccatggggg
       61 gcgccagagc tgcgcctttg ggatgcgcgg ccctggcgcc tcccatgacc tccggcaagg
      121 ccggaggccg cctttggggc gggcccgcac acgttgggtc ggcgcccatc tgtgccttct
      181 gcgtcatctg cggtttcaac tttttttggc tgaggctcgt cgatcagcag gtcgttcaat
      241 caatctgtgt gaatctgtgg atctaaagcc cttccagcgg tctccgcgcg accaggcctg
      301 agacacgctc cgggccttgg atgcgggacg gtagactgga cggatgccgt tgacgccgca
      361 ccgcaccctc acgcctgaag gcaccgagat cctgatcgag ccgctccccc atgtccggag
      421 ctgcgcggtg gggttctggg tccgccgcgg gtcccgccat gaggggccgc aggaggaggg
      481 gctcgcccac ttcctcgagc acacggtgtt caagggcacg gaggcctatc ccacccccga
      541 cgagctggcc gcggccacgg accgcctggg gggccacgtg gacgccttca ccggcaagga
      601 ggtagcctgc ttctacggca aggtgctctc cgaccagctg cccgacctgg tgcacctgct
      661 cggcgagctg gtgacctcgc cgcgcttcga caccgacgag ctcgtccgcg agcggggggt
      721 catcctcgag gagatcgccc agagcgagga ccagcccgat gactgggtga gcgagctctt
      781 ctacggcggc ttctgggagg gcacgcccct ggcccacccg atcctgggcc gccgcgacca
      841 ggtggcgggc tacggcccgg cggaggcccg gaccttcttc gaccacacct accgcgcgcc
      901 gaacctggtg atcgccgctg ccggcgccct ggagccggaa tccttcctcg acctgctgcg
      961 gcccatcctc ggccggctgc ccgtggggac ggcccaggcc gccagcgccg cctcgcgcac
     1021 ccggcctttc ctgctcaacg tgccgcggaa ggacctccag caggcgaacc tggtcatggg
     1081 cttccctgcg ccggaccacc gctcccccga ccgtgcggcc gcgcacctgc tgagccatgt
     1141 gctgggcggt ggcatggcct cccgcctgtt catggaactg cgggaacggc gggggctctg
     1201 ctaccaggtg ggcagctacc tgagtcccta cgccgatacc ggagccctgc agatcaccgc
     1261 cagctgcgcc cctgcccagc tgcgggagct ggtgaagcgc accatggcgg aatgcgcccg
     1321 ggtccgcgac aagggggtgg aggccgatga gctggagcgc gccaagctcc aggcccggac
     1381 cggcctcgtg ttcagccagg agagcagcag cagccggatg ttcagcctgg cccaccaggc
     1441 cgtgcaccac ggcgagctgc gcagcctcga ccagcagatg gccgagatcg aggcggtgac
     1501 ccagaacgac ctcctgcgcg tggcccagga tctcctcgat cccgcccagc tgggcctcag
     1561 cgcc
//
LOCUS       DATGWW010000021         1581 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_362953, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000021 DATGWW010000000
VERSION     DATGWW010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362953"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..1539)
                     /locus_tag="VK150_00240"
     CDS             complement(142..1539)
                     /locus_tag="VK150_00240"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HLP29754.1"
                     /translation="MRTLLRLVPALVLSAPGQAQVPLPEPPSNPFQAADPVLAALLRD
                     ALAGHPDLQKADAAVRMDQERIPQAGVLPDPTLSLGLQNDGFKRLEVGRMETSFYSVA
                     FTQPLPWPGKRGLRREVAALGVDQSSAARTRVQMGLEADVRRGYTALLLVRGQQRLLA
                     QQAVFLEQAESLARTRYEVGQGSQGDLLRAQLERTRLQLAAWSLEAEERTALATLNRL
                     RQHDPADPIPTTAELADLPEPEALTADQVEGRSPELAGARAGVRQTEKLLDLARLDRR
                     PDFAVTAGLMPRGGLDPMWQVGVSISLPIYGRHKQQRAVAEHEHHRQGQGAEVASVQT
                     LLRQRTEERTLQIQALRRTRDLYQGGLLVQSEANFKAVLAQYEAGRAPFLGALEALNG
                     WVGDQGAYLQTLAQLQAQHIALREAGLAPAPSITGGALAAASLSGGAAAPSASKSTAK
                     TPGKAQESGPASMKM"
BASE COUNT          197 a          553 c          625 g          206 t
ORIGIN      
        1 ggcgccgccg ggccgcagga gccaggtgcc gccgactccg gcgatgaggc cgagcgtcac
       61 caggccgaag gcgcggaggc gggagggacg gcggggcgag ggggactcga aggaaggctg
      121 gtcgaggctc atgggaatct cctacatctt catggaggcg ggaccgctct cctgggcctt
      181 gcccggagtc ttcgcggtgg atttggaggc gctgggcgcg gcggccccgc ccgagaggct
      241 ggcggcggcc agggccccgc cggtgatcga cggggcgggc gcgaggcccg cctcccgcag
      301 ggcgatgtgc tgggcctgga gctgggccag ggtctgcagg taggcaccct ggtcgcccac
      361 ccagccgttg agcgcctcga gggcgcccag gaagggcgcc cggccggcct catactgcgc
      421 cagcaccgcc ttgaagttgg cctcgctctg caccagcagg ccgccctggt agaggtcacg
      481 ggtgcggcgc agcgcctgga tctggagggt ccgttcctcc gtgcgctgcc gcaggagggt
      541 ctgcaccgag gcgacctcgg cgccctggcc ctggcggtgg tgctcgtgct cggccacggc
      601 gcgctgctgc ttgtggcggc catagatggg cagcgagatg ctcacgccca cctgccacat
      661 ggggtccagc ccgcctcggg gcatcaggcc cgcggtcacg gcgaagtcgg gccggcggtc
      721 cagccgggcg aggtcgagca gcttctccgt ctggcgcacg ccggcgcggg cgcccgccag
      781 ctcggggctg cggccctcca cctggtcggc cgtgagcgcc tccggctccg gcaggtccgc
      841 cagctcggcg gtggtgggga tgggatcggc gggatcgtgc tggcggaggc ggttcagggt
      901 cgcgagggcg gtccgctcct ccgcctccag ggaccaggcc gccagctgca ggcgcgtgcg
      961 ctcgagctgg gcccgcagca ggtcgccctg actgccctgc cccacctcat atcgggtgcg
     1021 ggccagcgac tcggcctgtt cgaggaacac cgcctgctgc gccagcagcc gctgctgccc
     1081 ccgcaccagc agcagggccg tgtagccccg gcgaacgtcc gcctccaggc ccatctggac
     1141 gcgcgtccgc gccgcggagg actggtccac gcccagggcg gccacctccc ggcgcaggcc
     1201 ccgcttgccg ggccagggca gcggctgggt gaaggccacg ctgtagaagc tcgtctccat
     1261 gcggcccacc tccagtcgct tgaagccgtc gttctgcagg cccagggaga gggtggggtc
     1321 gggcagcacg cccgcctggg ggatgcgttc ctgatccatc cgcacggccg cgtcggcctt
     1381 ctgaaggtcg ggatgccccg ccagggcgtc gcgcagcagg gcggccagca cgggatcggc
     1441 cgcctggaag gggttggatg ggggttcggg aagggggacc tgggcctggc ccggcgcgga
     1501 cagcaccagg gcgggcacca ggcgcagcag cgtgcgcatg ggaatctccg gacagggaca
     1561 gaaggcttgg cccgctcagc g
//
LOCUS       DATGWW010000022         3469 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_363001, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000022 DATGWW010000000
VERSION     DATGWW010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3469
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363001"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..751
                     /locus_tag="VK150_00245"
     CDS             <1..751
                     /locus_tag="VK150_00245"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLP29755.1"
                     /translation="RVVEFNRNYGQHSAIFGAFAEVAGQVVVTLDADLQNPPEEIPKL
                     VAKIEEGYDVVGGWRQGRQANDSFFRTMPSKIVNAVTRKTTGVGLHDYGCMLRAYRRE
                     VVNAMLLCKERSSFIPALANSFAKRITEVPVAHAERAAGTSKYGLWKLINLQFDLLTS
                     FSLLPLQMLSVFGVITAGVGFLLFLGLVAYRFLHPEGTAQGVFTLFAILFFFVGCQFI
                     AFGLLGEYIGRIYQEVRDRPRYMVRKIHQAK"
     gene            complement(756..947)
                     /gene="yacG"
                     /locus_tag="VK150_00250"
     CDS             complement(756..947)
                     /gene="yacG"
                     /locus_tag="VK150_00250"
                     /inference="COORDINATES: protein motif:HMM:NF015821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HLP29756.1"
                     /translation="MAMTLRPCPICRIPTAWERNPYKPFCSERCQTRDLGAWASESYR
                     VPEKPQDEEGEGWSEEPSV"
     gene            1090..2988
                     /gene="dnaK"
                     /locus_tag="VK150_00255"
     CDS             1090..2988
                     /gene="dnaK"
                     /locus_tag="VK150_00255"
                     /inference="COORDINATES: protein motif:HMM:NF001413.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HLP29757.1"
                     /translation="MGKIIGIDLGTTNSCVAVMEGGQPKVIPNPEGANTTPSVVGFNP
                     KTSERLVGVSAKRQAVAQPKITIYSIKRFMGLPYADSDREQKLVPYTVERADKGGCVV
                     DVLGKKLSPEEISAAVLAKMKEAAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGAIA
                     GLDVKRIVNEPTAAALAYGLDKKKDGTIAVFDFGGGTFDISILEVSEGVVEVKSTNGD
                     THLGGDNVDQAIIDWLADEFQKAEGIDLRKQADAMQRLKEAAEKAKIELSSTTQTDIS
                     LPYVTADASGPKHINQTLSRAKFESMIEPILQKLKGPCENAVRDAKLAHHEIDEVVMV
                     GGSTRIPKVQEMVKQIFGKEPNKSVNPDEVVAVGAAVQAGVLAGDVKGVLLLDVTPLS
                     LGINANGGQMSVIIPRNTTIPTKRSEVYTTAVDNQPGVDIEVFQGERPVVEGNKLLGQ
                     FHLGDIAPAPRGMPQIEVTFDIDANGIVHVTAKDKGTGKDASITLTGSTGLSKDEIEA
                     KVRDAEAHKAEDESRKAMLEEKNHLDQMVYQVEKLLKENGEKLPEADKKEAEEAVVEA
                     KAALSSLDKDRIKKALETLTAKSHKLAESLYKQEPPADGGTPGAPGAQAGGEKKGDDN
                     VIDAEVVS"
     gene            3143..>3469
                     /locus_tag="VK150_00260"
     CDS             3143..>3469
                     /locus_tag="VK150_00260"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HLP29758.1"
                     /translation="MSHPDYYKILGVPKTASEEDIKKAYRKLARKHHPDLNPGDAKAE
                     AEFKKLAEAHDVLSDAEKRKNYDTYGDPNGPGTQLPPGYQQGSGFSFEDIFAGFGGRP
                     MRHGPER"
BASE COUNT          704 a         1147 c         1115 g          503 t
ORIGIN      
        1 gcgggtggtg gaattcaacc ggaactacgg ccagcacagc gccatcttcg gcgccttcgc
       61 ggaggttgcg ggccaggtcg tcgtcaccct cgacgccgac ctgcagaatc cccccgagga
      121 gattcccaag ctcgtggcca agatcgagga gggctatgac gtagtgggcg gctggcgcca
      181 gggccggcag gccaatgaca gcttcttccg caccatgccc agcaagatcg tgaacgccgt
      241 gacccgcaag accaccggcg tggggctcca cgactatggc tgcatgctgc gcgcctaccg
      301 ccgcgaggtg gtgaacgcca tgctgctctg caaggagcgg tcgagcttca tccccgcctt
      361 ggccaacagc ttcgccaagc gcatcacgga ggtgcccgtg gcccacgccg agcgcgcggc
      421 cggcaccagc aagtacggcc tctggaagct catcaacctg cagttcgacc tgctcaccag
      481 cttcagcctc ctgcccctcc agatgctcag cgtcttcgga gtgatcaccg cgggagttgg
      541 cttcctgctg ttcctgggcc tggtggccta ccgcttcctg caccccgaag gcacggccca
      601 gggtgtgttc acgctgttcg ccatcctctt cttcttcgtg ggctgccagt tcatcgcctt
      661 tggcctcctg ggcgagtaca tcgggcgcat ctaccaggaa gtgcgggacc ggccccgata
      721 catggtgcgc aagatccacc aggcgaagta gccgcctaca ccgagggttc ctcgctccag
      781 ccctccccct cctcgtcctg gggcttctct gggacgcgat agctctcgct ggcccaggcg
      841 ccgaggtcgc gggtctggca gcgctccgag cagaagggtt tgtagggatt tctctcccag
      901 gcggtgggga tccggcagat ggggcagggg cgaagggtca tggccatcag catatctgtt
      961 ttgaaaaagg gattgaatga gaagaaaata tgagtaattt ttggaagatc tacttgactg
     1021 ccgggccgca gcccctatga tcatagggtc agggtgggcg tggcccgtcc ggacctcagg
     1081 aggagcgaca tgggcaagat catcggcatt gacctcggca ccaccaacag ctgtgtggcc
     1141 gtgatggaag gcgggcagcc caaggtgatc ccgaatcctg agggcgcgaa caccaccccc
     1201 tccgtggtgg gcttcaaccc caagaccagc gagcgcctcg tgggcgtgtc ggccaagcgc
     1261 caggcggtgg cccagcccaa gatcaccatc tattccatca agcggttcat gggcctgccc
     1321 tacgcggact cggaccgcga gcagaagctc gtgccctaca cggtggaacg cgccgacaag
     1381 ggcggctgcg tggtggacgt gctgggcaag aagctgagcc ccgaggagat cagcgcggcg
     1441 gtgctcgcca agatgaagga ggccgccgag gcctacctgg gcgagaaggt caccgaggcc
     1501 gtcattaccg tgcccgccta cttcaacgac gcccagcgcc aggccaccaa ggacgccggc
     1561 gcgatcgcgg gcctggacgt gaagcgcatc gtcaacgagc ccaccgccgc ggccctggcc
     1621 tacggcctgg acaaaaagaa ggatggcacc atcgcggtct tcgacttcgg cggcggcacc
     1681 ttcgacatca gcatccttga agtgtccgag ggcgtggtgg aagtgaagtc caccaacggc
     1741 gacacccacc tgggcggcga caacgtggac caggccatca tcgactggct ggccgacgag
     1801 ttccagaagg ccgagggcat cgacctccgc aagcaggccg acgccatgca gcgcctgaag
     1861 gaggccgccg agaaggccaa gatcgagctg tccagcacca cccagaccga catcagcctg
     1921 ccctacgtca cggcggacgc cagcgggccc aagcacatca accagaccct cagccgcgcc
     1981 aagttcgagt ccatgatcga accgattctg cagaagctga agggcccctg cgagaacgct
     2041 gtgcgcgacg ccaagctggc ccaccacgag atcgacgagg tggtgatggt cggcggctcc
     2101 acccgcatcc ccaaggtgca ggagatggtg aagcagatct tcggcaagga gcccaacaag
     2161 agcgtcaacc ctgatgaggt ggtggccgtg ggcgccgccg tgcaggccgg cgtgctggcc
     2221 ggcgacgtga agggcgtgct gctcctcgac gtgacgccgc tctccctggg catcaacgcc
     2281 aacggcggcc agatgagcgt catcatcccc agaaacacga ccatccccac caagcgcagc
     2341 gaggtctaca ccaccgccgt cgacaaccag cccggcgtgg acatcgaggt gttccagggc
     2401 gagcgcccgg tggtcgaggg caacaagctg ctcggccagt tccacctggg cgacatcgcg
     2461 ccggcccccc gcggcatgcc ccagatcgag gtgaccttcg acatcgacgc caacggcatc
     2521 gtgcacgtca ctgccaagga caagggcacg ggcaaggacg ccagcatcac cctgaccggc
     2581 agcacaggcc tctccaaaga cgagatcgaa gccaaggtgc gcgacgccga ggcccacaag
     2641 gccgaggacg agtcccgcaa ggccatgctc gaggagaaga accacctcga ccagatggtc
     2701 taccaggtgg agaagctcct gaaggagaac ggcgagaagc tgcccgaggc tgacaagaag
     2761 gaggccgagg aggccgtggt cgaggcgaag gccgccctgt cgagcctcga caaggaccgc
     2821 atcaagaagg ccctggagac cctcacggcc aagagccaca agctggctga gagcctctac
     2881 aagcaggagc cccccgccga tggcggtacc cccggcgcgc cgggcgccca ggcaggcggc
     2941 gagaagaagg gcgacgacaa cgtgatcgac gccgaggtcg tcagctaggg ttggatttcg
     3001 tccgggggtt tctcgctccg cttcgctgcg cgaacacccc cgggaccccc acgcagaggc
     3061 ccggcatagc cgggcctctg cttttcaatt cggatttgga tttttcggcg cgaacgaaat
     3121 ctgagtgctt tagactaaag ccatgtccca ccctgactac tacaagatcc tgggcgtgcc
     3181 aaagacagcc tcggaagagg acatcaagaa ggcgtaccgg aagctggccc ggaagcacca
     3241 cccggatctg aatcccggcg acgccaaggc ggaggcggag ttcaagaagc tggccgaagc
     3301 ccacgacgtg ctgtcggacg cggagaagcg gaagaactac gacacctacg gcgacccgaa
     3361 cggccccgga acccagcttc cgccgggcta ccagcagggc tcgggattct ccttcgagga
     3421 catcttcgcg ggcttcggcg ggcggcccat gcgccatggt cccgagcgc
//
LOCUS       DATGWW010000023         3213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_2329, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000023 DATGWW010000000
VERSION     DATGWW010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3213
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2329"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1706
                     /locus_tag="VK150_00265"
     CDS             <1..1706
                     /locus_tag="VK150_00265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29759.1"
                     /translation="AQGDKLGREIGAEAERRRQEAVLTYGGNTGQAARAQDAFGNAAL
                     MRQAEFGRDVAAGRAQAAEQARAGAVQQGTALLGQDQQAAAQLATLGIQQQEGAADRT
                     SREALAREGYQVQQQEGAAERAAREKLATAEIGSRERMQYADQTFQAAQSDLNRSLEQ
                     LLSNDRIGAQFKMAEMDQAFQERIQANGFVQDKDLEAMRADLQKSLQERGIQADTAKQ
                     IADQKFTAMQAEKDQAFQTQMEGMRQKFVTGERIGSQEWEGSMKTLDMRHEELLSKWE
                     IASREGMQTKELETQIKENAKARASQEMMAAATLAMTDKNFQAELQQRYQFNDQDIKL
                     KTKELEGQLNLMGLQGEQLKGAIADQKVSSAMNIAALGMEIGDGSEEAMKPFAEQFGA
                     AIEEYMKSQGITISSDDIEKSLMTGANKGKTTAPTRTDTGSFGDGSTVAGVDLKSITR
                     EDWKAVSSDPAKLSQFVKAGAVKEISSLGSITRIGDATKTIADAGLNDRVATTAGDKI
                     TFKPQTYVYYNGKPYELSFYESGLEGTGSFSDKSRNGYLHGIDLTTGKEVVIKHDRKD
                     I"
     gene            1706..2044
                     /locus_tag="VK150_00270"
     CDS             1706..2044
                     /locus_tag="VK150_00270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29760.1"
                     /translation="MAFDSEGLMDFGGGAFAGGLAGAKASGGNPYAIAGGAIAMGAMS
                     YFGGAPQRRLEKKVNKLQVRGMEQDLELGDFQLSEGRRQRARDLEAQARKETFGRLLG
                     EYFARKRGVK"
     gene            2044..3192
                     /locus_tag="VK150_00275"
     CDS             2044..3192
                     /locus_tag="VK150_00275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29761.1"
                     /translation="MRGGIILSNRLRAMQEAAENFGEGIDGIRMAQRKMAQEDQDRQA
                     QAEARALQTKASNQQLELGGFQARAAQRQEQDALGLRNDMTALEGLDNGLPAFGPQQP
                     GAEPQYMMKDPNAGLRNRLLASIETRMTGKPVSVADLEARKAEAATKRERETMAFNTD
                     QNKAKADIKETEARTGKLALEEKKIKAELDAITKGGMDPEKAAAVEGKLRGEFINQNK
                     VFMDVRDAWSRVNASGDDAAGDLSLIFNYMKMLDPGSTVREGEFANAQNAASVPDRVL
                     NAYNNALQGTRLSKGQREQFKGQAGKLYETQKSIYTNNAKTYMGLAADYGVNPARVAV
                     DLEGGVQGAQAQAAPAAAGNRDSEAVAWAKANPSDPRAAKILQINGGW"
BASE COUNT          735 a         1031 c         1037 g          410 t
ORIGIN      
        1 ccgcgcaagg ggacaagctg ggccgggaga tcggcgccga agccgagcgc cgccgacagg
       61 aggccgtcct cacctacggc gggaacaccg gacaggctgc gcgggctcag gacgcctttg
      121 gaaacgccgc cctcatgcgc caagccgagt ttggccggga cgtggccgcc ggtcgcgccc
      181 aggccgccga gcaggcccgc gccggcgccg tgcagcaggg aaccgcccta ctgggccagg
      241 accagcaggc cgccgcgcag ctcgccaccc tgggaatcca gcagcaggaa ggggctgccg
      301 atcgcacctc ccgcgaagcc ttggcccgcg aagggtacca agtccagcag caggagggcg
      361 cggcggaacg ggccgcccgg gagaaactcg ctacggccga aatcggatcc cgggaacgga
      421 tgcaatacgc cgaccagacc ttccaggcgg cgcagtcgga cctcaaccgc tccctggagc
      481 aactcctttc caatgaccgc atcggcgccc agttcaagat ggctgagatg gaccaggctt
      541 tccaagagcg catccaggcg aacggatttg tgcaggacaa ggatctggag gccatgcggg
      601 ccgacctgca aaagtccctc caggagcgcg gcatccaggc cgacacggcg aagcagatcg
      661 ccgaccagaa attcacggcg atgcaggccg agaaagacca agccttccag acccagatgg
      721 agggcatgcg ccagaagttc gtgaccgggg agcgcatcgg gtcccaggaa tgggaggggt
      781 ccatgaagac cctcgacatg cgccacgagg agcttctgtc caagtgggaa atcgcctccc
      841 gcgagggcat gcagacgaag gagcttgaga cccagattaa ggagaacgcc aaggcccgcg
      901 ccagtcagga gatgatggcg gccgccaccc tggccatgac cgacaagaat ttccaggccg
      961 agctccagca gcggtaccag ttcaacgacc aggacatcaa gctcaagacc aaggagctcg
     1021 aaggacagct caatctcatg ggcctgcaag gcgagcaact caagggggcc atcgcggatc
     1081 agaaggtgtc atccgccatg aacatcgccg ccctgggcat ggaaataggc gatggatcgg
     1141 aagaagccat gaagcccttc gcggagcagt tcggcgccgc catagaagaa tacatgaagt
     1201 cccagggaat caccatttcc agcgatgata tcgaaaagtc actcatgact ggcgccaaca
     1261 agggcaagac caccgcacct acccgcaccg ataccggatc cttcggggac ggctcaaccg
     1321 tggcgggcgt ggacctcaag agcatcaccc gcgaggattg gaaggccgta tcctccgacc
     1381 cggcgaagct ctcccagttc gtgaaggccg gggcagtgaa ggagatttct agcctcggat
     1441 cgataacccg tatcggggat gctaccaaga ccatcgccga cgccgggctc aatgaccgcg
     1501 tggcgacaac cgccggggac aagatcacct tcaagcctca gacctacgtg tactacaacg
     1561 gcaagcccta cgaactctcc ttctacgaat caggcttgga gggaaccggg agctttagcg
     1621 acaagtcgcg taacggatac ctccatggca tcgacctcac caccggcaag gaagtcgtga
     1681 tcaagcacga ccgaaaggac atctaatggc gttcgattcg gaagggctca tggactttgg
     1741 tgggggcgct ttcgcgggcg gattggccgg cgccaaggcc tccggcggaa atccttacgc
     1801 gattgccggc ggggcgatcg ccatgggggc aatgtcctac ttcggcggcg ctcctcaacg
     1861 ccgcctcgaa aagaaggtga acaaattgca ggtgaggggc atggaacaag atcttgagct
     1921 cggggatttt caactgtccg aaggccgtag gcaacgcgcc cgagacctcg aagcccaagc
     1981 ccgcaaggaa accttcgggc gcctcctcgg ggaatacttc gcccgtaagc ggggggtgaa
     2041 gtgatgcgcg ggggaatcat cctttccaac cgcctccgcg ccatgcagga agcggcggaa
     2101 aacttcggcg agggcatcga cgggatccgc atggcccagc ggaaaatggc ccaggaggac
     2161 caggaccggc aggcccaggc cgaggcccgc gccctacaga ccaaggcctc aaaccagcaa
     2221 cttgagcttg gagggttcca ggcccgcgcc gcccagcgcc aggagcagga cgccttgggc
     2281 ctccggaacg acatgacggc cctggaggga ttggacaacg ggctcccggc cttcggaccc
     2341 cagcagcccg gcgccgagcc ccagtacatg atgaaggatc caaacgcggg gcttcgtaac
     2401 cgtctcctcg cctccatcga aacccggatg accgggaagc cggtgagcgt ggcggacctg
     2461 gaggccagga aggccgaggc cgcgaccaag cgggagcggg agaccatggc cttcaacacg
     2521 gatcagaaca aggccaaggc cgacatcaag gagaccgagg cccgcaccgg gaagctggcc
     2581 ttggaggaga aaaagatcaa ggccgagctc gacgccatca ccaagggtgg catggacccg
     2641 gagaaggccg ccgccgtgga gggcaagctc cgcggggaat tcatcaacca gaacaaggtc
     2701 ttcatggacg tgcgggatgc ttggtcccgg gtgaacgcct ccggagacga cgcggccggc
     2761 gacctgtccc tcatcttcaa ctacatgaag atgctcgacc ctggatccac cgtccgggaa
     2821 ggtgagttcg ccaacgccca gaacgccgcc agcgtccccg atcgcgtcct caacgcctac
     2881 aacaacgcgc tgcagggcac ccgcctaagc aaggggcagc gcgagcagtt caagggccag
     2941 gccgggaagc tctacgagac ccagaagagc atctatacca acaacgccaa gacctacatg
     3001 ggtctcgccg ccgactacgg cgtgaacccc gcgcgcgtgg ccgtggacct cgagggcggg
     3061 gtccagggcg cccaggccca ggctgcgccg gccgccgccg gcaaccgcga ttccgaggcc
     3121 gtggcatggg ccaaggccaa tcccagcgac ccgcgcgcgg caaaaatcct gcagatcaac
     3181 gggggctggt aatggccttc gacccggaca agt
//
LOCUS       DATGWW010000024         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_2395, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000024 DATGWW010000000
VERSION     DATGWW010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2395"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1207)
                     /locus_tag="VK150_00280"
     CDS             complement(<1..1207)
                     /locus_tag="VK150_00280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29762.1"
                     /translation="MTPPVFAPATGRAFAGALVLACLSAAARAEDARALAGSDTSETA
                     RQAKGLPWIAHSSADFFYLASPAAGGSVPYQMSTYQGFTIQSLSFASFHAGWRFRETL
                     SEGLHEPYRELFALKLLGTAEIVRDHLFVSFGGNIPLTESRVAAYDSLAMFQSLNGYC
                     PLPVPNWISPLGLQAGVFGRYRLGAWNLMGSLAYIEPSQFEPIAGSPFHPASVLAGSL
                     RAILETRGARHRFDFKVSRYGQEETLAANPAHQEGGLYQLRYAWLRASGRAAWQLGGG
                     GAVKLPDANRPRLLPTALEPSETNDNIQRAYAEVAWTWSPTPNLLWRAWLVPKALLEW
                     STREQGHETELGLALGLRVFEVHRLRFAGNLLYGAFQDRTYLGVGARAEFAFRHLGFQ
                     DLEAQGEATT"
     gene            complement(1204..>1600)
                     /locus_tag="VK150_00285"
     CDS             complement(1204..>1600)
                     /locus_tag="VK150_00285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29763.1"
                     /translation="GAMVAHPLLGAQTPERVGALRIARTRGFSLKQERMNPLRADRLI
                     REFEAVNPARGTRSLADFLPGKLFTVGASLRAPDRPIQAFIFGEFRELDMEVDVLSSE
                     REGWSETGAFRIGSQEAGCYLCSPGRIGP"
BASE COUNT          302 a          485 c          586 g          227 t
ORIGIN      
        1 cggtagtggc ttctccctgt gcctccaggt cctggaaacc caggtggcgg aaggcgaatt
       61 cggcgcgggc cccgacaccc aggtaagtcc ggtcctggaa ggcgccgtag agcaggttgc
      121 cggcaaagcg cagacgatgc acctcaaaca ctcgcaagcc cagggccagg cccagctcgg
      181 tctcgtggcc ctgctcgcgg gtggaccact ccagcagggc cttgggcacg agccaggcgc
      241 gccatagcag gttgggagtg gggctccaag tccaggccac ctcggcatag gcgcgctgga
      301 tattgtcatt ggtttccgag ggctcgaggg ccgtggggag caaccggggg cggttggcgt
      361 cggggagttt gaccgcgccg cctccgccaa gctgccaggc ggcgcggccc gaagcgcgca
      421 gccaggcgta tcgtagctgg tacagtcccc cctcctggtg ggccgggttc gcggccaggg
      481 tctcctcctg gccgtagcgg gagaccttga aatcaaaacg gtgcctggcc ccgcgggttt
      541 ccagaatggc ccgcagggag ccggcaagga ccgaggcggg atggaagggg ctacccgcga
      601 tgggctcgaa ctgagacggc tcgatatagg cgagggatcc catcaggttc caggcaccca
      661 agcggtaacg gccgaataca cccgcctgga gcccaagggg cgatatccag ttgggaaccg
      721 gcagggggca gtatccgtta aggctctgga acatggccag gctgtcatag gcggccaccc
      781 tggattcagt aaggggaatg ttgccgccga aggaaacgaa caggtgatcc cggacgatct
      841 ccgccgtgcc caggagcttg agggcgaaaa gctcccgata gggttcatgc aggccttcgg
      901 acagggtctc gcggaagcgc cagccggcgt ggaaggatgc gaagctgaga gattggatgg
      961 tgaaaccctg gtaggtggac atctgataag gcacactccc gccggcggcg ggcgaggcca
     1021 ggtagaagaa atcagcggaa ctatgggcga tccacgggag gcccttggcc tgccgggcgg
     1081 tctcggacgt gtcggaaccc gccagggcac gggcatcctc ggcgcgggcc gcggcggaga
     1141 ggcaggccag gaccagggcc ccggcaaaag cacggccggt ggccggagcg aaaacggggg
     1201 gcgtcatggg ccaatcctgc cggggctgca cagatagcat cccgcttcct gggaaccgat
     1261 acggaaagcg cccgtctcgc tccagccctc ccgttccgag gaaagcacgt caacctccat
     1321 gtcgagctcc cggaattctc cgaagatgaa ggcctgaatg ggccgatcgg gagcgcggag
     1381 cgaggccccg acggtgaaga gcttacctgg aaggaagtcg gccagggatc gcgtgccgcg
     1441 cgcggggttc accgcttcga attcgcggat gaggcgatca gcgcggaggg gattcatgcg
     1501 ttcctgcttc agggagaacc cccgggtgcg cgcgatgcgc agggccccca cccgctctgg
     1561 ggtctgggcg ccgagcaggg gatgggccac catggcgcca
//
LOCUS       DATGWW010000025         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_136897, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000025 DATGWW010000000
VERSION     DATGWW010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136897"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VK150_00290"
     CDS             complement(<1..303)
                     /locus_tag="VK150_00290"
                     /inference="COORDINATES: protein motif:HMM:NF024686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitobiase/beta-hexosaminidase C-terminal
                     domain-containing protein"
                     /protein_id="HLP29764.1"
                     /translation="MKPAAKLALALAGVGAAAAVFDRLESGRGMRRQLWGLNQRHALE
                     FERKLKARKLPAVDPRILGSAKDSLPPPADISPPGKSIRYTLDGSIPDWHSDVYVKP"
     gene            complement(314..1015)
                     /locus_tag="VK150_00295"
     CDS             complement(314..1015)
                     /locus_tag="VK150_00295"
                     /inference="COORDINATES: protein motif:HMM:NF027640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4956 domain-containing protein"
                     /protein_id="HLP29765.1"
                     /translation="MNEILDKIGRLVQDPSVEVDLTGFLFALIVSAFVGMAVSAMYQI
                     FYENRATGSQIHRSFLLISPSITALFISIQFSLPLSLGLLGALSIIRFRTPIKEPEEV
                     GFIMLLIAGSVVCATFQFVLLLALLGLAFVFLLAQRFLPGLFRSKRSDGILLVVLGGE
                     IDGGRREKLVGHLRERLNRGRLQGVTFAENLTTLHFSFNGMESAQLDGLHQSLEAIAP
                     VQRLNIYYNSQGAVL"
     gene            complement(1017..>1740)
                     /locus_tag="VK150_00300"
     CDS             complement(1017..>1740)
                     /locus_tag="VK150_00300"
                     /inference="COORDINATES: protein motif:HMM:NF020916.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polyphosphate polymerase domain-containing
                     protein"
                     /protein_id="HLP29766.1"
                     /translation="YSFPSPPMEIFQENIEQKFIYPAGQARMLRDWLEYRFVPDPHHH
                     AGVIHSIYYDTPALHLYGEKLNSDYQKTKVRLRWYGSEGYRPDDDVICFLEIKRKFGA
                     VRRKRRESFPLPARILSGDPFSSQEVWNASSRTFANEYVPPGTLVPVAEIRYRRLRYV
                     DPETGSRLSLDFDIRCERANTALFPFRVPVYLDSGVLEQKGPSRFLLPSQGPIAGYLR
                     KCAFSKYAECIEGLQQPLSPRR"
BASE COUNT          319 a          490 c          641 g          290 t
ORIGIN      
        1 gggtttcaca tatacatcgc tgtgccagtc ggggatgctc ccgtccaggg tatagcggat
       61 gcttttgccc ggcggggaga tgtccgccgg gggcggcagg gagtccttgg cgctgccgag
      121 aatgcgtggg tcgacggcgg gcagcttgcg ggccttcagc ttgcgctcga actccagggc
      181 gtgccgctgg ttcagccccc agagctgtcg gcgcatgccg cggccggatt ccagcctatc
      241 gaacacggcc gccgccgcgc ccacgcccgc gagggccagg gccagcttcg cggcgggctt
      301 cacgcggaat ccctcaaagc accgcgccct ggctgttgta gtagatgttg aggcgctgca
      361 cgggcgcgat ggcctcaagg gactggtgca ggccgtcgag ctgggcgctc tccatcccgt
      421 tgaaggagaa gtgcagggtg gtgaggttct cggcgaaggt cacgccctgg aggcggccgc
      481 ggttcagccg ctcgcgcagg tggcccacca gcttctcgcg gcgcccgccg tcgatctcac
      541 cgcccaggac cacgaggaga atgccgtcgg agcgcttgga gcggaacaag cccggcagga
      601 agcgttgcgc gaggaggaag acgaaagcca ggcctaggag agccagcagc agcacgaact
      661 ggaaggtggc gcagaccacc gatcccgcga tgagcagcat gatgaagccc acctcctccg
      721 gctccttgat gggcgtccgg aagcggatga tggacagcgc cccgaggaga cccagggaga
      781 ggggcaggga aaactggatg gagatgaaga gggccgtgat cgacggcgat atgagcagga
      841 agctccggtg gatctgggac ccggtcgccc gattctcgta gaagatctgg tacatggcgg
      901 agacggccat tcccacgaag gcggagacga taagggcgaa gaggaaacca gtgaggtcca
      961 cctccacgct ggggtcttgc accaggcgtc cgattttgtc gaggatttcg ttcaagtcat
     1021 ctccttgggc tgagaggctg ctggaggcct tcgatgcact ccgcgtattt cgagaacgcg
     1081 cacttccgca ggtaaccggc gatgggcccc tgggaaggca ggaggaagcg cgagggaccc
     1141 ttctgctcca gcaccccgct atcgagatac accgggacgc ggaaggggaa gagggcggtg
     1201 ttggcccgct cgcagcggat gtcgaagtcg agggagaggc gcgagccggt ctcggggtcg
     1261 acgtagcgga ggcgccggta gcggatttcc gcgacgggca ccaaggttcc tggggggacg
     1321 tactcgttgg cgaaggtccg cgaggaggcg ttccagactt cctgggagga gaagggatcg
     1381 ccgctcagga tccgggcggg cagggggaag gactcgcgtc gcttgcggcg cacggcgccg
     1441 aactttcgtt tgatctcgag gaagcagatc acgtcgtcgt cgggccggta gccttccgaa
     1501 ccgtaccagc ggaggcgcac cttggtcttt tggtagtcgc tgttcaattt ctcgccgtac
     1561 aggtggaggg cgggggtgtc gtagtagata ctgtggatta cgcccgcgtg gtgatggggg
     1621 tccggcacga agcggtattc cagccaatca cgtagcatgc gcgcctgccc cgcggggtag
     1681 atgaactttt gctcgatgtt ttcctggaag atctccatgg gaggggacgg aaaggagtat
//
LOCUS       DATGWW010000026         2506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_136901, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000026 DATGWW010000000
VERSION     DATGWW010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136901"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1819
                     /locus_tag="VK150_00305"
     CDS             <1..1819
                     /locus_tag="VK150_00305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29767.1"
                     /translation="TTGSDGLRIERAECASNGSVTGAWTALPVPDPLVSTYLDRSVAP
                     GLYYTYRLTNLKGAVAGQASPPSTPVFTGLEAVLYITANYDAGARGVQVSWSSSSQAD
                     GILLERAECDANGLPAGTWTALALPAGYRTSFLDLDILEVRGYAYRVSNLRGQVASAA
                     VQTSYAVWTPLFAPVGLQVVPAAGGLQLTWQNRSTAATQIVIRRVPTATFSSDVAILS
                     PDTTSYLDPLTALGYYTYTVVAKTSSQEASSEAVTAATPNPPGSLALTATPFDFPTLA
                     DAALAPAGTWAGVTGQPFGLLSHSDPWPAYFPGIAARWSDPIVQMDRQGRPHLVYAST
                     ASGASGACTLIHAWFNGTAWTSENILTAQIPSTSTNPGWTFKLDSVGVPHLLVDQSTT
                     DAPYGGTTASLRYVHKTGSAWVQESLGSVSPALSNVGSFHLALDASDQPHILLGNWTS
                     LLACTRTAPDSWATTTPPTGAVNAGWYDYLDGLWADADHGWIFYESTVSGGGASYGLW
                     VLQMKAGVWLAPQLLGTRDHDGSPTTAAAAMSPDLSRVAIATRTTAGIKAFHQAADGW
                     HETLVGPQANGPLLRLGFDGQQKVHLLLPAASGYADFHE"
     gene            complement(1844..>2506)
                     /gene="proC"
                     /locus_tag="VK150_00310"
     CDS             complement(1844..>2506)
                     /gene="proC"
                     /locus_tag="VK150_00310"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HLP29768.1"
                     /translation="GIHLSGEAPAAVKASEVVLLCVKPKELKGLLAGLRAEGALDHRP
                     LVVSIAAGTTLEFLTANTPEGTPLVRAMPNTPCAIRRGMTVLAAGAGVSEAQLAQARA
                     LFEPLGRVMDLDEKHMDAVTGLSASGPAFMFIILESLAEGGVQCGLPRAVALELAAQM
                     TLGAASMVLETGRHPAALKDEVTTPAGCTIAGLLALEDGRIRSVVARGIERATQVAAG
                     LG"
BASE COUNT          377 a          951 c          807 g          371 t
ORIGIN      
        1 caccacgggt tcggacggcc tgcggatcga gcgggccgag tgcgcttcca atggatccgt
       61 gaccggggcg tggaccgccc tgcccgtgcc ggatcccctc gtgtccacct acctcgaccg
      121 cagcgtcgcc ccgggtctct actacaccta tcggctcacc aacctcaaag gcgccgtggc
      181 cggccaggcc agccccccgt ccacgcctgt cttcacagga ctggaggcgg tgctctacat
      241 caccgccaat tacgatgccg gcgccagagg ggtgcaggtg tcctggtcgt cgagcagcca
      301 agccgatggc atcctcctgg aacgcgccga atgcgacgcg aacggcctcc ccgcgggaac
      361 ctggaccgct ctcgcgctgc ccgccggcta ccggacatcg ttcctggacc tggacatcct
      421 ggaggtccgc ggctacgcct accgcgtgtc caacctccgg ggccaggtcg ccagcgccgc
      481 cgtccagacc tcctacgccg tgtggacgcc gctgttcgcc cccgtgggcc tccaggtggt
      541 acccgccgcc ggcggcctgc agctgacctg gcagaaccgg agcaccgcgg ccacccagat
      601 cgtcatccgg agggtgccta ccgccacgtt cagcagcgat gtggccatcc tgtccccgga
      661 caccacgagt tacctggatc cgctcaccgc ccttggctac tacacctata ccgtcgtggc
      721 gaagaccagc tcccaggagg cgtccagcga ggcggtcacg gcggccaccc cgaatcctcc
      781 gggatccctg gcgctcacgg cgactccatt cgatttcccc accctggcgg atgcggccct
      841 ggctccggca gggacctggg ccggtgtcac cggccagccc ttcggcctcc tctcccattc
      901 ggatccatgg cccgcctact tcccggggat cgcagcgcgc tggagcgatc ccatcgtgca
      961 gatggaccgc cagggccggc cccacctggt gtacgcaagt actgcttcag gagcatcggg
     1021 cgcctgcacc ctgatccacg cctggttcaa cggcacggcc tggacctcgg agaacatcct
     1081 caccgcgcag attccctcga ccagcaccaa cccagggtgg accttcaagc tcgattccgt
     1141 gggcgttccc cacctgctgg tggaccagtc aaccaccgat gcgccctacg gcggaaccac
     1201 cgccagcctc cgctatgtcc acaagaccgg aagcgcatgg gtgcaggagt ccctgggcag
     1261 cgtctcgccc gcgctcagca atgtggggag tttccacctg gccctggacg cctctgatca
     1321 gccccacatc ctcctgggca actggacgag cctgctggcg tgcacccgca cggcgcctga
     1381 cagctgggcc accaccacgc cgcccaccgg tgcggtgaac gccggatggt acgactacct
     1441 cgatggcctc tgggcggatg ccgaccatgg ctggatcttc tacgagagca cggtgtccgg
     1501 cggcggcgcg agctatggcc tatgggtgct ccagatgaag gctggggtct ggctggcacc
     1561 ccagctgctg ggcacccggg accacgatgg ctcccccacc accgccgccg cggccatgtc
     1621 tcccgacctc agccgtgtgg ccatcgccac ccggaccacc gcgggcatca aggcgttcca
     1681 ccaggcggcg gacggatggc atgaaaccct cgtgggaccc caggcgaatg gacccctcct
     1741 gcggctcggg ttcgacggtc agcagaaggt ccacctcctc ctgcccgccg ccagcggcta
     1801 cgccgacttc cacgagtagg tcctggatcc cgccgagcca ggcttagccc agtcccgcgg
     1861 ccacctgggt ggcccgctcg atgccccggg cgaccacgga gcggatgcgg ccatcctcca
     1921 gggcgaggag ccccgcgatg gtgcagccgg ccggagtggt gacctcgtcc ttgagggcgg
     1981 cggggtggcg gcccgtctcc agcaccatgg acgcggcgcc gagcgtcatt tgcgcggcga
     2041 gctcgagggc cacggcccgg ggcaggccgc actggacgcc gccctcggcc agcgactcca
     2101 ggatgatgaa catgaaggcc ggcccactgg cactcaggcc cgtgacggcg tccatgtgct
     2161 tctcgtccag gtccatcacc cggcccaggg gctcgaagag cgcccgggcc tgggccagct
     2221 gggcctcgct gacgccggca cccgcggcca gcaccgtcat gccccggcgg atggcgcagg
     2281 gcgtgttggg catggcccgc acgaggggcg tgccttcggg cgtgttcgcg gtgaggaact
     2341 cgagcgtggt gcccgcggcg atggagacca ccaggggtcg gtggtccagg gcgccttcgg
     2401 ccctcaggcc cgccagcagg cccttcagct ccttcggctt cacacagagc agcaccactt
     2461 ccgaggcctt caccgcggcg ggggcctcgc cggacaggtg gatgcc
//
LOCUS       DATGWW010000027         1500 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_136902, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000027 DATGWW010000000
VERSION     DATGWW010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136902"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1471
                     /locus_tag="VK150_00315"
     CDS             <1..1471
                     /locus_tag="VK150_00315"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HLP29769.1"
                     /translation="LGDGAGFVSSRHALVALKGPNLWLRDMDSTNGTFVGKLRVTERE
                     LLGGEVISLGPMGPALRVLVVDSEAPDPGEANPSGSDTWITERENADLAVPQAPGSDS
                     LVLEMEKKLKAGSSAKEAVQGLIKDPERLSRMLKGGVEPARVADFLGRAGWTLVRSRR
                     RMILGAALLGPVLLALVGFLVHQNLSYRAKLREQGNLMTQIHDLERGLQVLAQSDDEI
                     NPERVRMVHQLLAAEKQLYRIRENLRLPDRAETYSSSLGIEVHQVLEGLGKKGFIVPE
                     SFIVSVKSQIDFFCMPQNRSTLEMVFARKRRYEKMINQELMKAKLPMDFLYIAMQESM
                     LDTAALSPNDARGLWQLVPVTARDYDLVVPEDWKTRPAHEDQRTQPRLSTQAAALYLR
                     RLYSEFGDAALAMAAYNAGEAKLRRVLRKIEDPVNDRDFWYLYRMGLLPRETNQYVPK
                     IIAQILIDRKRERYGFEAPIRRAAASGRDERIVTGLPED"
BASE COUNT          284 a          487 c          479 g          250 t
ORIGIN      
        1 cctgggagac ggggccggct tcgtttcttc ccgccatgcc ctggtggccc tcaaaggacc
       61 caatctttgg ctccgggaca tggattcgac caacggaacc ttcgtgggca agctgagggt
      121 gaccgagcgc gagcttctcg gcggcgaggt catcagcctg ggtcccatgg ggcccgcctt
      181 gcgggtgctg gtggtggatt cggaggcgcc ggatcccggt gaggcgaatc catcaggatc
      241 ggatacatgg atcacggaac gtgagaatgc cgacctagcg gtcccccagg cccccggcag
      301 cgacagcctg gtgctggaga tggagaagaa gctcaaggcc ggcagcagcg ccaaggaggc
      361 ggtacagggc ctcatcaaag atcccgagcg tctgtcgcgg atgctcaagg gcggggtgga
      421 gccggcccgg gtggcggact tcctcggcag ggcgggctgg accctggtac ggtcccggcg
      481 gcgcatgatc ctgggagccg ctctcctcgg cccagtgctc ctcgccttgg tgggtttcct
      541 ggtccaccag aacctcagct accgggccaa gctccgggag cagggcaatc tcatgaccca
      601 aatccacgat ctggagcgcg gccttcaggt cctcgcccaa agcgacgatg agatcaatcc
      661 cgagcgggtg cgcatggtgc atcagctgct ggccgcggag aagcagctct accgcatccg
      721 cgagaacctc cgtctgcccg accgcgccga gacctatagt tcgtctctcg gcatcgaggt
      781 ccaccaggtg ctggaaggcc tgggaaagaa aggtttcatc gtacccgagt cctttatcgt
      841 atcggtgaag tcccagatcg atttcttctg catgccccag aaccgctcca ccctggagat
      901 ggtcttcgcc cgcaagcggc gctacgaaaa gatgatcaac caggagctga tgaaggccaa
      961 gcttcccatg gacttcctct acatcgccat gcaggaaagc atgctggaca cggccgccct
     1021 cagccccaat gacgcccggg gcctgtggca gttggtaccg gtcacggcga gggactatga
     1081 ccttgtggta cccgaggact ggaagacgcg ccctgcccac gaggatcagc gcacccagcc
     1141 gcgcctctcg acccaggccg ccgccctgta cctgcgccgc ctctactccg agttcggtga
     1201 tgccgccctt gccatggcgg cctacaacgc cggcgaagcc aagctccgca gggtgctccg
     1261 caagatagag gacccggtga acgataggga cttctggtac ttgtaccgca tgggtctgct
     1321 cccgcgggag accaaccagt acgtgcccaa gatcatcgcc cagatcctca tcgacaggaa
     1381 gcgggaacgg tacggtttcg aggcgccgat ccgccgggcc gccgcgtccg gaagggacga
     1441 acgcatcgtc actgggttgc ccgaggacta gtcctcgcca ggaaaatact ccgccagcgg
//
LOCUS       DATGWW010000028         2551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_273261, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000028 DATGWW010000000
VERSION     DATGWW010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2551
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_273261"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..685
                     /gene="rsmH"
                     /locus_tag="VK150_00320"
     CDS             <1..685
                     /gene="rsmH"
                     /locus_tag="VK150_00320"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: protein motif:HMM:NF013919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HLP29770.1"
                     /translation="LTVRRMNFAGLPRLKAEAGGFDVVLADLGVSSMQIDNPARGFTW
                     KADGPLDLRLNPQRGRAAADLLASLDETSLTELLVENSDEPHAAAIAREVHGRDIRTT
                     RELANAVRLALRAEGLEEDDTKKALQRTFQALRIAVNDEFTVLDQFLALLPGVLNPGG
                     RVAILTFHSGEDRRVKKAFQQGLREGLYQAVAPEPLRAGPEERRANPRSTSAKLRWAK
                     VPGGQLSGA"
     gene            709..1593
                     /locus_tag="VK150_00325"
     CDS             709..1593
                     /locus_tag="VK150_00325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29771.1"
                     /translation="MSHPTASSPFRTAVLWTLAVLLMAATVIYQRRTGPTHPLRGTVT
                     VGGKVVAYKLIRSEETVRDARVALPDPGVPATLVWRRFPLQEAWTRQAMVREEKDGPV
                     ELAGYLPRQLAAGKLEYTVEVGGPGAVQRIPAADPIVLRYKGPVSTPLLIAHLSMMFM
                     AVLAGLRAGLGALVGAQAPRRLLRITLGCMTLGGLILGPFVQKAAFGHYWTGFPWGYD
                     LTDNKTLLMWGVWVLAAFVAGPRPRRREGWARAAVLAATLAMAVVYLIPHSLRGSQLD
                     YGKVNVGADAKDAVITGR"
     gene            complement(1580..>2551)
                     /locus_tag="VK150_00330"
     CDS             complement(1580..>2551)
                     /locus_tag="VK150_00330"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HLP29772.1"
                     /translation="ALLVHTTPSAGYGWPVVRNGWVQERFQREGAGHPGAVQGWITEG
                     LAARLFASSGHDFTALARGADSLAFRPVPLSVRAKGQLISVVRRLEQWNVAGLLPGTD
                     ADLRKELVIYSAHWDHFGKGADGAIYAGAVDNGTGCAAVLALAQALVHRPLKRSVMFF
                     FPCAEEQGLLGASAYVAAPLWPLDRTVLNVNLESLNVVGPTRDIGLLGSKEPRLRALC
                     EQAAAATGLVITPAKADPAGLCFRSDHFPFMKAGVPALSPGFSLDGGWDYLGDKVAAQ
                     AKAADFLNHYHRPTDRYDPAWNLAGLLQQVRFALELGRLAGTVPSAR"
BASE COUNT          367 a          929 c          890 g          365 t
ORIGIN      
        1 gctcacggtg cgccgcatga acttcgcggg cctgccccgc ctgaaggccg aggccggggg
       61 cttcgacgtg gtgctcgccg accttggcgt ctcctccatg cagatcgaca acccggcccg
      121 gggattcacc tggaaggccg acggccccct cgacctgcgc ctcaaccccc agcgcggacg
      181 cgccgccgcg gacctgctgg cctcgctcga tgaaacctcc ctgacggagc tgctcgtcga
      241 aaactcggac gaaccccatg ccgccgccat cgcccgggag gtccatggcc gggacatccg
      301 caccacccgt gaactggcga atgccgtacg gctggccctg cgggccgagg gcctggagga
      361 agatgacacc aagaaggccc tgcaacgcac cttccaggcc ctgcgcatcg ccgtcaatga
      421 cgagttcacc gtgctggatc agttcctggc cctgctgccg ggcgtgctga atcccggcgg
      481 ccgcgtggcc atcctcacct tccattccgg cgaggatcgg cgcgtgaaga aggccttcca
      541 gcagggcctg cgcgagggcc tctatcaggc ggtggcgccg gagccgctcc gggccgggcc
      601 ggaggagcga cgcgcgaatc cccgctccac cagcgccaag ctgcggtggg cgaaggttcc
      661 cggcgggcag ctttccgggg cgtgaagctt gcgatagggt ggtcggatat gagccacccc
      721 accgcgtcct ctcccttccg cacggcggtc ctctggaccc tcgccgtgtt gctcatggcc
      781 gccacggtga tctaccagcg ccgcacgggc cccacccatc ccctgcgggg cacggtgacg
      841 gtcggcggga aggtcgtcgc ctacaagctc atccgcagcg aggagaccgt gcgcgacgcc
      901 cgggtggccc tgcccgatcc tggcgtgccc gccaccctgg tgtggcggcg ctttccgctg
      961 caggaggcct ggacgcggca ggccatggtt cgagaggaga aggacggccc cgtcgagctg
     1021 gcgggctacc taccgaggca gctggcggcg ggcaagctgg agtacaccgt ggaggtgggc
     1081 gggcccggcg cggtccagcg catccctgcc gcggatccca tcgtcctgcg ctacaaggga
     1141 cccgtgtcca cgcccctcct catcgcccac ctctccatga tgttcatggc ggtgctcgcg
     1201 gggttgcggg caggtctggg cgccctcgtc ggcgcccagg ccccccgtcg cctgctgcgg
     1261 atcaccctgg gttgcatgac cctcggcggg ctcatcctgg gccccttcgt gcagaaggcc
     1321 gccttcggtc actactggac cggcttcccc tggggctacg acctgaccga caacaagacc
     1381 ctgctcatgt ggggcgtctg ggtgctggcc gccttcgtgg ccgggccgag gccgcgccgc
     1441 cgcgaaggct gggcccgcgc cgcggtgctg gcggccaccc tggccatggc cgtggtctac
     1501 ctgattcccc acagcctgcg gggcagccag ctggactacg gcaaggtgaa tgtcggcgcc
     1561 gacgccaagg atgcggtgat caccgggcgc taggcaccgt tcccgcgagg cgtcccagtt
     1621 ccagcgcgaa gcgcacctgc tgcaggaggc ccgcgaggtt ccaggcggga tcgtagcggt
     1681 ccgtgggccg gtggtagtgg ttcaggaaat ccgccgcctt ggcctgggcg gcgaccttgt
     1741 cgcccaggta gtcccatccg ccgtccagcg aaaagcccgg cgaaagcgcc ggcacgcccg
     1801 ccttcatgaa ggggaagtga tcggagcgga agcagagccc cgcggggtcg gccttggccg
     1861 gggtgatcac caggcccgtg gccgccgcgg cctgctcgca gagggcccgg agccgcggct
     1921 ccttcgagcc cagcaggccg atgtcccggg tggggcccac cacgttgagg ctctccaggt
     1981 tcacgttcag cacggtgcga tcgaggggcc agagcggcgc ggccacgtag gccgaggcgc
     2041 ccagcaggcc ctgttcttcg gcgcagggga agaagaacat cacgctgcgc ttcaggggcc
     2101 ggtgcaccag cgcctgggcc agggccagca ccgcggcgca gcccgtgccg ttgtccacgg
     2161 cgccggcgta gatggcgccg tccgcgccct tgccgaagtg atcccagtgg gccgagtaga
     2221 tcaccagctc ctttcgcagg tccgcatcgg tgccaggcag gaggcccgcc acgttccact
     2281 gctccagccg gcgcaccacc gagatgagct ggcccttggc tcgaacggag agaggcacgg
     2341 ggcggaaggc caggctgtcc gcgcccctgg ccagggctgt gaaatcgtgg cctgagctgg
     2401 cgaagagccg agcggccagg ccttcggtga tccacccctg caccgcgccc ggatgcccgg
     2461 ccccctcccg ctggaaccgc tcctgcaccc aaccgttccg caccacgggc cagccgtagc
     2521 ccgcggacgg cgtggtatgc accagcaggg c
//
LOCUS       DATGWW010000029         1959 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_2695, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000029 DATGWW010000000
VERSION     DATGWW010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2695"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VK150_00335"
     CDS             complement(<1..279)
                     /locus_tag="VK150_00335"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLP29773.1"
                     /translation="MPLIEARDLSRVYDLDGGRVVALDGVSLDVQAGELVAVMGPSGS
                     GKSTFMNLVGCLDRPTAGSLRLAGQVVERLGPDDLAGLRNREIGFVFQQ"
     gene            complement(654..1640)
                     /locus_tag="VK150_00340"
     CDS             complement(654..1640)
                     /locus_tag="VK150_00340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HLP29774.1"
                     /translation="MSPLCGVTVVSPTPNPPLICGVDVASQALEARIGPDGPGQSFPN
                     SPEGIQALAAFCREHGATLVALEATGGYESLAYGLLWESGLPCARLNPRQVRQFAQSM
                     GVLEKTDRLDAGLIARFAQVRAVVPQPPAGPTQRRLAAAVARLRQLTALRTLQANQRR
                     MIEDAQIRAGLDDLLALVARQIRALEAQIAALIEADPLWREMDRSFRSLKGVADRTVA
                     GLMAELPEIGTLSGKAVAKLAGLAPLACDSGRMSAPRRVRGGRSRIRALLYVIGRGVA
                     RHNPDFAAWQESLSRAGKPKKVIRIALARKILVRLNAKARDIRLALNNPQPA"
BASE COUNT          288 a          653 c          744 g          274 t
ORIGIN      
        1 ctgctggaag acgaagccga tctcgcggtt gcgcaggccc gccagatcgt caggtccgag
       61 ccgctccacc acctgtccag caaggcgcag ggagccggcg gtcggccggt cgaggcagcc
      121 gacgaggttc atgaaggtgg atttgccgga gcccgacggt cccatgacgg cgacgagctc
      181 gcccgcctgc acatcgaggg agacaccgtc gagcgccact acgcggcctc cgtcgaggtc
      241 gtagacccgg gagagatcgc gcgcctcgat caggggcatg ggcggcccct gtactccagc
      301 gcacgggccg aaggaagtgc cgaaacgatc ctacgccctg agccgagagg gacgcgtcgt
      361 ctacctctcc ccgcgagcgg agagagggct gaggccccct tgtcggggcc gaagcaagcc
      421 cccggacttg ttccgggggc gagggtgagg gggcgtcgcc gattgcgctc tatcctgaga
      481 caccccctca cccccgctcc ggcttcgcct ccgctcgcct gcacggaaca gccgttccgc
      541 gcagggcctc tccccgcccg cggggagagg agatggttgc agattgtttc ggcatgcgcc
      601 gcgccagccg tctccctccc cccgcttgcg gcggggagcg actgtctggt ctgtcaagcg
      661 ggttgaggat tgttgagggc gaggcggatg tcccgggcct tggcattgag gcgcacgagg
      721 atcttgcggg cgagggcgat gcggatgacc ttcttgggct tgccggcccg gctcaggctc
      781 tcctgccagg cggcgaagtc cgggttgtgg cgagccacgc cccggccgat cacgtagagc
      841 agggctcgga tccggctgcg gccgccgcgc acccgacggg gggcgctcat gcggccgctg
      901 tcgcaggcaa ggggggccag gccggcgagc ttggccaccg ccttgcccga gagggtgccg
      961 atctcgggca gttcggccat cagcccggcc accgtgcggt cggccacgcc cttgaggctg
     1021 cggaagctgc ggtccatctc ccgccagagc ggatcggcct cgatcagggc cgcgatctgc
     1081 gcctccaggg cccggatctg ccgggccacc agggccagga ggtcgtcgag gccggcgcgg
     1141 atctgcgcat cctcgatcat ccggcgctgg ttggcctgca gggtgcgcag ggcggtgagc
     1201 tgacgcaggc gggccaccgc ggccgcgagc cggcgctggg tggggccggc cgggggctgg
     1261 gggacgacgg cgcggacctg ggcgaagcgg gcgatcaggc cggcgtcgag gcggtcggtt
     1321 ttctccagca cgcccatgct ctgggcgaac tggcgcacct ggcgcgggtt gaggcgggcg
     1381 cagggcaggc cgctttccca cagcaggcca taggccaggc tctcgtagcc gccggtggcc
     1441 tcgagcgcca ccagggtggc gccatgctcc cggcagaagg ccgccagggc ctggatgccc
     1501 tcgggggagt tggggaagct ctggccgggc ccgtcaggtc cgatgcgggc ctccagggcc
     1561 tgggaggcga catcgacgcc gcagatgagc ggcgggttcg gggttgggga gacgacagtg
     1621 actccacaga gagggctcat cacgctaacc tgccttgtcc atgcgatcgt ggaagaccaa
     1681 gcgactgtgc ggtcgcgtgc ggcaacggca gcggtcccaa agctccccga cgggtgttgg
     1741 cctgagggaa aacggggggt cgccgccgga cgggggatcg ggcggccgcc cgatcccccg
     1801 cacccccaaa ctcaccacca atcgggggca tcgaccagat acaaggggtt aggggtgggg
     1861 ggtgccaggg caagtctcga ccttgcagga acgagctctg ccgtaagggc gagggtgttc
     1921 tgaagggtct cggccgagcg gcatcgcccc ccaccctca
//
LOCUS       DATGWW010000030         2365 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_363333, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000030 DATGWW010000000
VERSION     DATGWW010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2365
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363333"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..833)
                     /gene="hemB"
                     /locus_tag="VK150_00345"
     CDS             complement(<1..833)
                     /gene="hemB"
                     /locus_tag="VK150_00345"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF006762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HLP29775.1"
                     /translation="MLNRSRRLRTSAAMRNLVAETDLRPRHLIQGHFVQPQAGRSEIS
                     SMPGIFNAGVEDTVRQVEKDLKKGLTSVLLFGVPEEGSKTADAAYVRDRQGVIPVVVK
                     ALKKAFGSDLIVMTDVCLCGATSHGHCGLVDDEGVVLNDESLPILAEMALRHAEAGAD
                     VVAPSDMMDGRVTAIRALLDQNGFTRTSILSYAIKHAGAYYGPFREAAHSSPKFGDRK
                     TYQMDPRNAREGLNDALLDVDEGADMLMVKPALPNLDLIWRLREAQLAPICAYHVSSE
                     F"
     gene            complement(827..1519)
                     /locus_tag="VK150_00350"
     CDS             complement(827..1519)
                     /locus_tag="VK150_00350"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HLP29776.1"
                     /translation="MTPAAPRPRLALARPAQHPLSDTVRKAGWEAVPYAFTRLQASKL
                     SPPRPFADIAALLILSPSGAKVAGARVPAGTLCLVQGSGTADALGREDLDVLLPSEAR
                     AEALWDLLKLQFPSGGEFMLARGERSREYLEVVAKDTPWHIHPWVTHREAPREPFPPL
                     PEVEGVLAMSPLQAEILAPIARDLQRFAWGEATAEAFARAGAPAHAQCEPKPTQLWAM
                     LAQHLKKEESPC"
     gene            complement(1516..>2365)
                     /gene="hemC"
                     /locus_tag="VK150_00355"
     CDS             complement(1516..>2365)
                     /gene="hemC"
                     /locus_tag="VK150_00355"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: protein motif:HMM:TIGR00212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HLP29777.1"
                     /translation="SALAVGQAEPMVRFLEAKGYEVSWRKFSTSGDQWLQGPLDKQVG
                     GGFFTKELEDAMAAGAADLLIHSLKDVSLERPAGIVAACIPHREDPSDWLVMRPDAPG
                     DLVIGTSAVRRERVLSQLFPKARFTWIRGNVQTRLQRVRDGILRDEPLHATMLAAAGL
                     KRLGLDLSGLTVRPLAPAELPSAPGQGALLAEARADRPDLLEALAEMHDPLTARCVTL
                     ERQVLAGIGGGCQQPLGALATPQADGSLLLQAAYAPDGGLRRAEARGTDDQELLARVL
                     KGIGLS"
BASE COUNT          346 a          787 c          874 g          358 t
ORIGIN      
        1 ctgaactcgc tggacacgtg gtaggcgcag atgggcgcca actgggcctc gcgcaggcgc
       61 cagatgagat ccaggttcgg cagggccggc ttgaccatga gcatgtccgc gccctcgtcc
      121 acatcgagga gcgcgtcgtt caggccttcg cgggcattgc ggggatccat ctggtaggtc
      181 ttgcggtcgc cgaacttcgg gctgctgtgg gcggcttcgc ggaacgggcc gtagtaggcg
      241 ccggcatgct tgatggcgta gctgagaatg ctggtccggg tgaacccatt ctgatcgagc
      301 agggcccgga tggccgtcac gcggccgtcc atcatgtcgc tgggcgccac cacatcggcg
      361 cccgcctcgg catggcgcag cgccatctcc gccaggatgg gcagcgattc gtcgttcagc
      421 acgacgcctt cgtcgtccac gaggccgcag tggccgtgac tggtggcgcc gcagaggcac
      481 acatccgtca tcacgatgag gtcggagccg aaggcctttt tcaaggcctt caccaccacg
      541 ggaatgacgc cctggcggtc gcggacatag gcggcgtctg ccgtcttgga gccttcctca
      601 ggcacgccga acagcagcac gctggtgagg ccctttttca gatccttctc cacctgccgc
      661 accgtgtcct ccacgccggc gttgaaaatg cccggcatgc tggagatctc gctgcggccc
      721 gcctggggct gcacaaaatg gccctggatg aggtggcgag ggcgaaggtc ggtctcggcc
      781 accaggttgc gcatggcggc gctggtgcgg aggcggcggg agcggttcag catggggact
      841 cctccttctt gagatgctgc gcgagcatgg cccatagctg ggtcggtttg ggttcgcact
      901 gggcatgggc cggggcaccg gcccgggcga aggcctcggc cgtagcctcg ccccaggcga
      961 accgctggag gtccctcgcg atgggggcca ggatctcggc ctgcagaggg ctcatggcga
     1021 gcaccccctc gacctccggc aggggcggga acggttcccg gggcgcctcg cggtgggtga
     1081 cccagggatg gatgtgccag ggagtgtcct tggccaccac ctccaggtat tcgcggcttc
     1141 gttctcccct ggccagcatg aactcgccgc cggaaggaaa ctgcagcttg agcagatccc
     1201 acagggcctc ggcgcgggcc tccgagggca gcagcacgtc caggtcctcc cgtcccaagg
     1261 catcggcggt gccgctgcct tggaccaggc acagcgttcc agccggcacc cgggcccccg
     1321 ccaccttcgc gcccgagggg ctgaggatca gcagggccgc gatgtcggcg aagggcctcg
     1381 gcggggacag cttggaggcc tgcagccggg tgaaggcgta gggcacagcc tcccagccgg
     1441 ccttgcggac cgtgtccgag aggggatgct gggcgggccg ggccagcgcc agccggggac
     1501 ggggggccgc cggagtcatg agaggccgat gcccttcagg acgcgggcca gcaactcctg
     1561 gtcgtcagtg ccccgggctt cggcccgccg caggccgcca tctggcgcgt aggccgcctg
     1621 aagaagcagg cttccgtccg cctggggggt ggccagggcg ccgaggggct gctgacagcc
     1681 gccgccgatg ccggcgagca cctggcgctc cagggtgacg cagcgggcgg tcagggggtc
     1741 gtgcatctcg gccagggctt ccaggagatc ggggcggtcc gcccgggcct cggccagcag
     1801 ggccccctgc cccggtgccg agggcagttc cgccggcgcg agggggcgca cagtgaggcc
     1861 ggagagatcc aggcccaggc gcttcaaccc ggcagcggcg agcatggtgg catgcagcgg
     1921 ctcatcacgg aggatgccgt cgcggacccg ctggagccgc gtctggacgt tgccccggat
     1981 ccaggtgaac cgggccttgg ggaagagctg gctgagcacc cgttcgcggc gcacggcgct
     2041 ggtgccgatg accagatccc cgggggcgtc gggccgcatc accagccagt cagaggggtc
     2101 ctcgcgatgg gggatgcagg cggccacgat tcccgcgggc cgctccaggg agacatcctt
     2161 gaggctgtgg atgagcaggt ccgccgcacc cgccgccatc gcatcttcca gttccttggt
     2221 gaagaagccg ccgcccacct gcttgtcgag ggggccctgc agccactggt cgccggaggt
     2281 ggagaacttg cgccaggaca cttcgtagcc cttggcttcc aggaaccgga ccatgggttc
     2341 ggcctggccc accgccaggg cggat
//
LOCUS       DATGWW010000031         1724 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_2735, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000031 DATGWW010000000
VERSION     DATGWW010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2735"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VK150_00360"
     CDS             complement(<1..524)
                     /locus_tag="VK150_00360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HLP29778.1"
                     /translation="MLRRSARGFSLLELLVVLVIIGIVAAVSGTWYGAAQPAAVKGTV
                     NTLYGVLSEARTVARTTGRTVTLTTSGHQANLTLTFPSQGDVLPVPANQPLTTWLRTA
                     AGGSASKYSGVDTDGSWPIYTQAAPNPDPLAGGEPAIAALFTNGVAPGASGKLFTGST
                     STAMSFDATGRANR"
     gene            complement(666..>1724)
                     /gene="priA"
                     /locus_tag="VK150_00365"
     CDS             complement(666..>1724)
                     /gene="priA"
                     /locus_tag="VK150_00365"
                     /inference="COORDINATES: protein motif:HMM:TIGR00595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HLP29779.1"
                     /translation="QLLQLRQRPAGITLPSVEIVDLRDAYRQLRRKVILAPTLMQALT
                     DTLAKGEQALLLLNRRGYENFWMCRACGKTLGCPHCAISLTYHRGDYRLRCHLCGHET
                     VPPEACPDCGADHLRGVGEGTEQVEDHLRQLFPAARILRLDRDTTRRRGSFEAGLLAA
                     ESGQVDILVGTQMLAKGHTFPRLTLVGVLNADQGLKVADFRASERTFQLLTQVAGRAG
                     RAELPGRVILQTYSPEHPAITFALAQDFEGFAASELPFREGLGYPPFTALSLYRAEAD
                     TPKAARDALDAFRQRLTVPGLRVLGPLEAAVPRVRDQWRMHLLLKGGRGALGEVLARH
                     PLDPAGSISLDRDPLQFG"
BASE COUNT          285 a          550 c          622 g          267 t
ORIGIN      
        1 tcgcgattgg cccgcccggt ggcgtcgaag gacatggcgg tgctggtgct gccggtgaag
       61 agctttcccg atgcgccggg cgccacgcca ttcgtgaaaa gggccgcgat ggcgggctcg
      121 ccgcccgcaa gcggatcggg gttgggggcc gcctgggtgt agatcggcca ggaaccgtcc
      181 gtatcaacgc ccgaatattt gctggcgctg cccccggcgg cggttcgaag ccaggtggtc
      241 aacggctggt ttgctggaac aggaagcaca tcgccttggg aggggaaggt aagcgtcaag
      301 ttcgcctggt gtccactcgt ggtgagcgtg acggtccggc cggtggtgcg ggccacggtg
      361 cgggcctccg acaacacgcc atacagtgtg ttgacggtcc ccttaaccgc cgcaggttgc
      421 gcggcgccgt accaggtccc ggatactgcg gccacgatgc cgatgatgac cagcacgacc
      481 agcagttcga gcagcgaaaa ccctcgcgcg gatcgtctca gcatgcgtcc ctcctggttg
      541 acacccaaga atcggcctgg gcgcatggat tgaaaacttt ttttaaatat tggaaataaa
      601 aggctaatca ttcatgcggg ccatgaattc aaagcgggaa ttcatgattg tatacaaaat
      661 atacactacc cgaactgcaa tggatcccgg tccaggctga tagatccggc cgggtccagg
      721 ggatgccggg ccagcacttc gccgagggcg ccccgtccgc ccttgagcag caggtgcatg
      781 cgccactggt cgcggacccg ggggaccgcc gcctcgaggg gacccagcac gcggagaccc
      841 ggcacggtca gccgctggcg gaaggcgtcg agggcatccc gggccgcctt cggcgtgtcc
      901 gcctcggccc ggtagaggga gagggccgtg aagggcgggt agcccagccc ttccctgaaa
      961 ggcagttcgg aggcggcgaa cccttcgaag tcctgggcca gggcgaaggt gatggcgggg
     1021 tgctccggcg aataggtctg gaggatgacg cggcccggca gctcggcccg gcccgcgcgg
     1081 cccgccacct gggtgagcag ctggaaggtg cgctcggagg cccggaaatc ggccaccttg
     1141 aggccctggt ccgcgttgag cacgcccacg agggtgagcc tgggaaacgt gtgccccttg
     1201 gcgagcatct gggttcccac caggatgtcc acctgcccgg attccgccgc caggaggccc
     1261 gcctcgaagg atccgcgccg gcgcgtggtg tcccggtcga ggcggaggat gcgcgccgcc
     1321 gggaagagct ggcgcaggtg atcctccacc tgctccgtgc cctcccccac gccccggagg
     1381 tggtcggcgc cgcagtcggg gcaggcctcc ggcggcacag tctcgtggcc gcacaggtga
     1441 cagcgcagcc ggtagtcgcc gcggtggtag gtgagggaga tggcgcagtg cgggcagccc
     1501 agcgtcttgc cgcaggcccg gcacatccag aagttctcgt agccccggcg gttcagcagc
     1561 aggagggcct gctcgccctt cgccagcgtg tccgtgagcg cctgcatgag cgtcggcgcc
     1621 aggatcacct tccggcgcag ctggcggtag gcgtcccgga ggtcgacgat ctccaccgag
     1681 ggcagcgtga tgcccgcagg ccgctggcgc agctgcagca gctg
//
LOCUS       DATGWW010000032         1720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_2800, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000032 DATGWW010000000
VERSION     DATGWW010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2800"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..850)
                     /locus_tag="VK150_00370"
     CDS             complement(<1..850)
                     /locus_tag="VK150_00370"
                     /inference="COORDINATES: protein motif:HMM:NF012927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,4-dienoyl-CoA reductase FMN-binding
                     domain-containing protein"
                     /protein_id="HLP29780.1"
                     /translation="MPYPHLLAPLDLGFTTLPNRVLMGSMHTNLEEAKGGFTKLAAFY
                     AERARGGVGLIVTGGIAPNLQGRLTPFGSQLSWPWQVRKHRKVTEAVHAAGGKIALQI
                     LHGGRYSYHPFSVAPSAVKSPITPFKPRELSDRAVRATIRDYARCAALARKAGYDGVE
                     IMGSEGYLINQFIAARTNRRTDAWGGSFEHRMRFPVAVARAVRQAVGPDFIIIFRLSM
                     LDLVPDGSSWEEVVQLAKALEAAGVTLLNTGIGWHEARVPTIGAMVPRGAYAWVTRRL
                     KGEVGIP"
     gene            1340..1543
                     /locus_tag="VK150_00375"
     CDS             1340..1543
                     /locus_tag="VK150_00375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29781.1"
                     /translation="MELTWISIAASLAMGSGAAFLFIFAVKRDWMRNIEDAKYQVFWS
                     DKQDHEQAKPSQETTDGSQSKAE"
BASE COUNT          335 a          508 c          571 g          306 t
ORIGIN      
        1 gcgggatgcc cacctcgccc ttgagccgcc gggtcaccca ggcgtaggcg ccccggggca
       61 ccatggcgcc gatggtgggg acgcgggcct cgtgccagcc gatgcccgtg ttgagcaggg
      121 tgacgcccgc ggcctccagc gccttggcca gctgcaccac ctcctcccag ctgctgccat
      181 cgggcaccag gtccagcatg gagagccgga agatgatgat gaagtccggc ccgacggcct
      241 gcctcaccgc ccgggccacg gccacgggga agcgcatgcg gtgctcgaaa ctgccgcccc
      301 aggcgtcggt gcggcggttg gtgcgcgcgg cgatgaactg gttgatgagg tagccttcgc
      361 tgcccatgat ctccacgccg tcgtagccgg ccttccgggc cagggccgcg cagcgcgcgt
      421 agtcgcggat cgtggcccgc acggcccggt cgctcagctc gcggggcttg aagggggtga
      481 tggggctctt cacggcggaa ggcgcgacgc tgaaagggtg gtagctgtag cgtccgccgt
      541 ggaggatctg tagggcgatc ttcccgccgg cggcatgcac ggcctccgtc accttccggt
      601 gcttgcggac ctgccagggc caggagagct gcgagccgaa gggggtgagc cggccctgca
      661 ggttcggcgc gatgccgccg gtgacgatga ggcccacacc gcccctggcg cgttcggcat
      721 agaaggcggc aagcttggtg aagccgccct tggcctcctc gaggttggtg tgcatcgagc
      781 ccatgagcac gcggttgggc agggtggtga acccgaggtc gaggggggcc agcaggtggg
      841 ggtagggcac gggggctccg gggcggtccg gccagtgtag gcccggtggc gggctacctg
      901 gagccaggga ggatgactgg gggcctggcc ggcgggccgg cccgggcatc ggacatttgg
      961 tggatggaaa tctcgcctca ttgcagcgat tggaaaaaat gttccaacaa tgtttagaca
     1021 atatatggtt tttattgcat tgattggatt gaacccataa atatcattcc gtgtaaatat
     1081 gtaaaaatta aaaataaaaa agttatacta aaattatgtt gatattaaac tagaaaaaca
     1141 tgacaattca tgaatttaaa aattaattaa cattaatcat tatcgtattt ccatattgtg
     1201 tccctcgtca cacagcgagt gctggtaaat cgagttcaac gaaacgtgac cagcagatcc
     1261 gcaagactgc atttctggca ccaaacccag actctcgcgc caaatccccg gcgcggagcc
     1321 gaaccccgag gacccttccg tggaactgac ctggatctcg atcgcagcca gcctggcgat
     1381 gggttccggg gccgccttcc tcttcatctt cgcggtcaag cgggactgga tgcggaacat
     1441 cgaggacgcg aaataccagg ttttctggtc ggacaagcag gaccacgaac aggcgaaacc
     1501 ctctcaggag acgaccgatg gcagtcaatc taaagcggag tagcgcggag gattccgatg
     1561 gggggaagac ctcccgccgc cggatgctcg gctggctcac cggcgcgggg ctgttcggct
     1621 ccgcgggcct cagcgccgtg tcgaacttcg tgttcatcaa gcccagggcc acctacggcc
     1681 agccgcagcg cttcagcgtg ggcaagcccg aggactaccc
//
LOCUS       DATGWW010000033         1719 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_182342, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000033 DATGWW010000000
VERSION     DATGWW010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182342"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(356..1276)
                     /gene="fmt"
                     /locus_tag="VK150_00380"
     CDS             complement(356..1276)
                     /gene="fmt"
                     /locus_tag="VK150_00380"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HLP29782.1"
                     /translation="MTRIAFLGTPRAAVPALRALAEEGVAAVFCNPDRPAGRGRHLEA
                     PPVKVAALELGLPLHQPQDWKAPETRELWEGLKVDLAVVVAYGHLLPRWMLDSCPLGV
                     WNLHFSLLPRWRGAAPVNHALLAGDEETGVSLMRLTPGLDEGPVLAQSHRDIGQQDTA
                     ESLLTALAADAAELLMDQLPLMLCGCARPVEQRHELATYASKLRKDMGHLDWRRPAAD
                     LHRQVRALWPWPGSELQVEGQPLKVCGVGALRTCYRDPGQLLWGKEGAWLTTTEGALE
                     LTQLQRPGKPVQPALQALQPWGASGSHLLA"
     gene            complement(1279..>1719)
                     /gene="def"
                     /locus_tag="VK150_00385"
     CDS             complement(1279..>1719)
                     /gene="def"
                     /locus_tag="VK150_00385"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: protein motif:HMM:NF001159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HLP29783.1"
                     /translation="GDWTPELEQLVADMFETALDEEGVGLAAPQVGVNLNLAVIDCSC
                     GEDPAQQIILINPEIIHEEGSQVGPEGCLSIPGIREVLERPQKVTVRNRGKDGSWHEL
                     TGEDLLARAFCHEIDHLRGRLFVEYFGPVKRQVIQRKYQKQAKG"
BASE COUNT          227 a          611 c          600 g          281 t
ORIGIN      
        1 gacccccgcg ctcgacccgg cggagccgcg cctcgcttga tgtcatccgg gggttctgcg
       61 ctgcgcgcac acccccagac cacgtgcttg gctcggcgga gccgcgcctg gcctgatgtt
      121 atccgggggt tccgcgctgc gcgcacacac ccggaccccc gcgcttggct cggcggagcc
      181 gcgcctcgct tgatttactc cagggttccg cgctgcgtgc gcacccccgg acccccgcgc
      241 ttggctcggc ggagccgcgc cgagcttgat gcactccagg gttccgcgct ccttgggcta
      301 ttgcttgtgg aattgcggag gtggggcctt cttctggatt cgggggtgga tgccttcagg
      361 cgagcaggtg gctgccgctg gcgccccagg gctgcagggc ctggagggcg ggctggacgg
      421 gcttgccggg gcgctgaagc tgagtcagct ccagggcgcc ttccgtcgtg gtgagccagg
      481 caccctcctt gccccaaagc agctggccgg gatctcggta gcaggtgcgc agggcgccca
      541 ccccgcagac cttcagcggc tgcccctcca cctgcagttc ggagccgggc cagggccaca
      601 gggcccgcac ctggcgatgc aggtccgccg cgggccggcg ccaatccagg tgacccatgt
      661 ccttccgcag cttcgaggcg taggtggcca gttcgtgccg ctgttccacg ggccgcgcgc
      721 agccacagag catcaggggc agttggtcca tgagcagctc cgccgcgtcg gcggcgaggg
      781 ccgtcagcag gctctccgcc gtgtcctgct gcccgatgtc ccgatggctc tgggccagca
      841 cgggcccctc gtcgagcccc ggggtgaggc gcatgaggct caccccggtt tcctcatctc
      901 ccgccagcag ggcgtggttc acgggcgcgg ccccgcgcca ccggggcaac agcgagaaat
      961 gcaggttcca cacgccgagg ggacaggaat cgagcatcca gcggggcagg aggtgaccgt
     1021 aggccaccac cacggccaga tccaccttga ggccttccca cagctcgcgg gtctcaggcg
     1081 ctttccagtc ctggggctgg tggaggggca ggcccagttc cagggcggcc acctttaccg
     1141 gcggcgcctc caggtgccgc ccccggccgg cgggccggtc gggattgcag aagaccgccg
     1201 cgaccccttc ctcggcgagg gccctcagag ccggaacggc cgcgcggggg gtgccgagga
     1261 acgcgatgcg ggtcatggtc agcctttggc ttgtttctgg tacttccgtt ggatcacctg
     1321 ccgcttgacc gggccgaagt actcgacgaa caggcggccg cgcaggtggt cgatctcgtg
     1381 gcagaaggcc cgggccagca ggtcctcgcc cgtgagctca tgccatgagc catccttgcc
     1441 ccggttccgg accgtcacct tctgggggcg ctccagcacc tcgcggatgc cagggatgga
     1501 caggcagccc tcgggcccta cctggctccc ctcttcgtgg atgatctccg gattgatgag
     1561 gatgatctgc tgggcgggat cctccccgca ggaacagtcg atcaccgcca ggttgaggtt
     1621 cacgccgacc tggggcgccg ccaggccgac cccttcttcg tccagggcgg tctcgaacat
     1681 gtcggccaca agctgttcca gctcgggggt ccagtcgcc
//
LOCUS       DATGWW010000034         7524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_48225, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000034 DATGWW010000000
VERSION     DATGWW010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 7524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7524
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48225"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="VK150_00390"
     CDS             <1..182
                     /locus_tag="VK150_00390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29784.1"
                     /translation="MIHGLMEVLGDRLRVSVDRFNPFQLIEVDGRTEDPATVREIGGG
                     AAVVVGLALRQVGDR"
     gene            179..778
                     /locus_tag="VK150_00395"
     CDS             179..778
                     /locus_tag="VK150_00395"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HLP29785.1"
                     /translation="MIKINLLGDALGQPGARKGGDKATAEPVQVYTGEGGSRASLPIA
                     GVVVGLVFAALGGVYYLWLNSEFTKAEKRKAELERDKKQYEPYIALEKKFREKKDALQ
                     KKEEVMTTLKRQQALPVHFLEELANSLPDDVWFKKISQKGAMITVEGEGRNFESINAF
                     YGNLQSRTRWFKKINYPGAKRVTTGSFEFSISFELQNAV"
     gene            787..1398
                     /gene="pilO"
                     /locus_tag="VK150_00400"
     CDS             787..1398
                     /gene="pilO"
                     /locus_tag="VK150_00400"
                     /inference="COORDINATES: protein motif:HMM:NF016253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HLP29786.1"
                     /translation="MNPQLQKQIGVGALAGIILAGLVYFLLGGKRADLESIHADVKTL
                     QADVDKGKLLKASYEKLREEVAKQDKRIEELIKIMPSETDYGEIPYRIKKIADDAGID
                     QVAFALKPERRDAYYTEKPVEFEFRVGFHSLGQFASLISGYEKIINLSNIEITRKTDN
                     RSIYPASVKCTISAFIYNPEAAPVAPAKKPAGAPAAKAGAKED"
     gene            1408..1842
                     /locus_tag="VK150_00405"
     CDS             1408..1842
                     /locus_tag="VK150_00405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29787.1"
                     /translation="MIRLPRAMFLIVCAALSAQAPVKPAEAPAPVAEDVATIKATPYK
                     PVIQRDPFSAPRDERPADALDVLDDIAVKGMIRKDGKNFAIVSDSRGIVRWLPVGHRF
                     KDGEITAITDKAVTFHQWEVNTTNRSVFRTITKTFKREEGKR"
     gene            1839..3863
                     /gene="pilQ"
                     /locus_tag="VK150_00410"
     CDS             1839..3863
                     /gene="pilQ"
                     /locus_tag="VK150_00410"
                     /inference="COORDINATES: protein motif:HMM:TIGR02515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HLP29788.1"
                     /translation="MNARLSSLLVAGGVVLAGIHTGSLHASPSMEATVRKATLLATSL
                     EADGAGAKVFLRVPGMLAQPGVQVLSSPLRVVVDLPGVDRGTAVTRKDLAQLSHPLIQ
                     KARLAQFSTEPKAVTRLVLEVAPGTQVLVGTTAEGVQLLLSPGQGKAQARLDPTLQAP
                     MPSPVTVPVAAPVVVAQAPQTRTAPPPAGVKPLAPLPSFGSAFQTLPQLAASTAMPAA
                     SPEAVQAPEAEKPAPAAAPRTGGGRTLGGGLTNYTGSKITIDLQNTEIRDFLRILADT
                     GKLNLVMDPDVQGNFGFKFTDTPWDQVLDVVLKNAGLGKEIQNGVLRVAKVDKLQKEE
                     EERKKLEETKALAGELQTITRPLSYAKVGEVQKILKDMLTKRGSAILDDRTNTLIITD
                     LPRNISVIDDLLQTLDVQIQQVQIEARVVEANKNWQREFGVKWPQSNNGSVSIGSGAG
                     GTGTPWVGPTSPYWNGTNLSNDGRNAVAWSPGKDGATSITAPAGEVWLSFLSQSLSVN
                     LVLQALEKDGTLKIVSSPKVVTQNNKKATILSGEKIPYPTQQGGAQGGAITVAFIDAN
                     LQLDVTPQITNEGTIIMDLKVEKAEADFTRTVNGTPTIIRKAIETQVLVRDGGTAVLG
                     GVYITNSSTGRTGVPFLSKIPLIGFLFRNDTKAEKNVELLIFITPRVIRQ"
     gene            complement(3925..4125)
                     /locus_tag="VK150_00415"
     CDS             complement(3925..4125)
                     /locus_tag="VK150_00415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29789.1"
                     /translation="MAAISCTHCGADLTAPQSVRIAEYRFGHLEKVAEDPGFKYHFEQ
                     ADNFTILCNSCKRLVRTLPIAK"
     gene            complement(4151..4303)
                     /locus_tag="VK150_00420"
     CDS             complement(4151..4303)
                     /locus_tag="VK150_00420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29790.1"
                     /translation="MTTPVLILAGLAALFVIYVAYRIGRALLRLFIGLAALALLSWGL
                     WKFFHS"
     gene            complement(4300..5130)
                     /locus_tag="VK150_00425"
     CDS             complement(4300..5130)
                     /locus_tag="VK150_00425"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HLP29791.1"
                     /translation="MTGILAILGPGVLGRSAAQWAVECGLEVRLLGRDKAHAETGRQE
                     IQKRWGEGIAQGRLTAHAFEAASLEGVDVLLEALPEHAEAKATALASAGRWGSPDLTI
                     LSGTSSLPISGLAQRSGLAGRLVGFHLFVPVPRMAVVEMAVAPDTGTRWVTRARALGQ
                     ALGKRIIPVRDQPGFAASRMALAQGLEAMRLLEAGVATAEDLDALMTLGYGHPVGPLE
                     LSDRVGLDLRLQIAEGLAAAGEARFQPPESLRRRVAEGAIGRKARRGFHTWDLRGKRT
                     "
     gene            complement(5127..6821)
                     /locus_tag="VK150_00430"
     CDS             complement(5127..6821)
                     /locus_tag="VK150_00430"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLP29792.1"
                     /translation="MNILKKLFGQNEQEVSDMPGPTPEQDWFLPEKSREQLNALFVDM
                     LHPVNLHIFTLPGTGDVFNEYLRRFSADIARVCDKIILHQHRIGDDDARKWGVTYSPT
                     VLLEPERYRIRFVGAPMGEEGRSFLAAVLMVSQRESGLTDATKDILKALDEERTVKVF
                     ASPTCPYCPPQAVNAFRCAVERPDLVSVWCVETGQMVELAQRYNVGSVPHTVFNEKLT
                     VLGLEPETRFAMELVTLKDMQAELLAPKHQPGETVSVDCLILGAGPAGLTAGIYAGRA
                     GLKTLILEKDTIGGQVAVTPVVENYPGFSNIPGLALMEVMAAQARQYCEILPEEPVSL
                     SAGEAGVTAATASITIKAKVLLIATGAKWRKLEVPGETEYFGHGVNYCATCDGYLYKG
                     RTVLVVGGGNTALEYAAYLYAERPVTLAYRGEEFSKANDVNRRILEDLERAGQVEVWR
                     RADIQALGDTGGAPAVEVTFKDGRAARFHHVLYALGGSTPDGFLKQAGVALDGKRPLV
                     DHRFHSNVPGLYLAGDLVAGGKGSIVKAFNTGRAVVWEGLCQDHLECRIPGRGERA"
     gene            6925..>7524
                     /locus_tag="VK150_00435"
     CDS             6925..>7524
                     /locus_tag="VK150_00435"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLP29793.1"
                     /translation="MSAKQPGIETLALHAGQTPDSQTRSRAVPIYQTTSFTFRDTEHA
                     ANLFALKEFGFIYSRIMNPTNDVLENRLAAMHGAAAGLVTASGMSAIFYAVAAITQAG
                     QNIVSGSNLYGGTVTLFAHTLKRFGIEVRFVDSSDPANFAKAIDENTRLVFTESIGNP
                     RCNVDDMEGIATVARKHGLPLIVDNTVSPPPILNPFDFGA"
BASE COUNT         1384 a         2557 c         2383 g         1200 t
ORIGIN      
        1 ccatgatcca cggcctgatg gaagttctcg gcgaccggct gcgggtgtcc gtggaccgtt
       61 tcaatccctt ccagctcatt gaggtcgacg gccgcaccga ggatcccgcc acggtccggg
      121 agatcggcgg cggagcggcg gtcgtcgtcg ggctggctct tcgccaagtg ggggaccgat
      181 gatcaagatc aacctgctcg gtgatgcgct gggacagccc ggcgccagga agggcggcga
      241 caaggcgaca gccgagcccg tccaggtcta cacgggcgaa ggcggcagcc gtgcgagcct
      301 ccccatcgcg ggggtggtcg tgggccttgt gttcgcggcc ctcggtggcg tctactacct
      361 ctggctgaac agcgagttca ccaaggcgga gaagcggaag gccgagctcg agcgcgacaa
      421 gaaacagtac gagccctaca tcgccctcga gaagaagttc cgggagaaga aggacgcgct
      481 ccagaagaag gaagaggtga tgaccaccct caagcgccag caggccctgc cggtgcactt
      541 cctggaagag cttgcgaaca gcctcccgga cgatgtctgg ttcaagaaga tctcccagaa
      601 gggggccatg atcaccgtcg agggcgaagg gcggaacttc gagtccatca acgctttcta
      661 cggcaacctg cagtccagga cccgctggtt caagaagatc aactacccgg gcgccaagcg
      721 cgtgaccacc ggatccttcg aattctccat ctccttcgaa ctccagaacg ccgtctgagg
      781 taggccatga atcctcaact tcagaaacaa atcggtgtgg gcgcgctggc gggcatcatc
      841 ctggcgggcc tggtctattt cctcctcggg ggcaagcggg ccgacctgga atccatccat
      901 gcggacgtca agaccctcca ggctgacgtc gacaagggca agctcctgaa ggccagctac
      961 gagaagctcc gcgaagaggt ggcgaagcag gacaagcgca tcgaggaact gatcaagatc
     1021 atgccttccg agaccgacta cggcgagatt ccgtaccgca tcaagaagat tgccgacgac
     1081 gcgggaatcg accaggtggc cttcgcgctc aagcccgaac gccgggacgc ctactacacc
     1141 gagaagcccg tggagttcga gttccgcgtc ggattccatt ctctcgggca gttcgcctcc
     1201 ttgatctcgg gatatgaaaa gatcatcaac ctctccaaca ttgagatcac gcggaagacg
     1261 gacaaccgca gcatctatcc agccagcgtg aaatgcacga tcagcgcctt catctacaac
     1321 cccgaggctg cgccggttgc tccggcgaaa aagcccgccg gagccccagc cgccaaggct
     1381 ggcgccaaag aggattaagg tgacgccatg atccgactcc cccgtgccat gttcctgatc
     1441 gtctgcgcgg ccctgtccgc ccaggccccc gtcaagcctg cggaggctcc ggcccccgtg
     1501 gccgaggacg tggccaccat caaggccacc ccctacaagc ccgtcatcca gcgcgatccg
     1561 ttctctgcgc cgcgggatga gcgccccgcc gacgccctgg acgtcctcga cgacattgcc
     1621 gtgaagggca tgatccgcaa ggatggcaag aatttcgcaa ttgtctccga cagtcgggga
     1681 attgtccggt ggctgcccgt cgggcaccgg ttcaaggatg gagagatcac cgccatcacc
     1741 gataaggccg tgaccttcca tcagtgggaa gtgaacacca cgaatcgctc tgtattccgc
     1801 accatcacga agacgttcaa gcgtgaggag ggtaaacgat gaatgctcgc ctgagttcct
     1861 tgctggtcgc agggggcgtg gtcctggcgg ggatccacac ggggtccctc cacgcatcgc
     1921 cgtccatgga agccacggtc cggaaggcca cccttctggc gacctccctc gaagccgacg
     1981 gcgccggggc gaaggtcttc ctgcgggttc cgggcatgct ggcccagccc ggggtgcagg
     2041 tcctgtccag ccccctccgg gtggtggtgg atctcccggg cgtggaccgc ggcaccgcgg
     2101 tcacccggaa ggatctggcc cagctgagcc atcccctgat ccagaaggcc cgcctggccc
     2161 agttctccac cgagccgaag gcggtcaccc gcctcgtgct tgaggtggcg cctggcaccc
     2221 aggtgctggt cggcaccacg gctgaagggg tccagctcct cctgagcccc ggccagggca
     2281 aagcccaggc tcgcctggac ccgaccctcc aggcgcccat gccctccccg gtgaccgtgc
     2341 cagttgcggc gcctgtggtg gtggcccagg ccccgcagac caggaccgcc ccgcctccgg
     2401 ccggcgtcaa acccttggct cccctgcctt cctttggaag cgctttccag accctgccgc
     2461 agctggcggc ctcgacggcc atgcctgccg cgagccctga ggcggtacag gcgcctgaag
     2521 cagagaaacc ggctcccgca gcggcccccc gcacgggtgg cggacggacc ctgggtggtg
     2581 gactcaccaa ctacaccggc tccaagatca ccatcgacct ccagaacacc gagatccgcg
     2641 acttcctgcg catcctggcg gacaccggga agctcaacct ggtcatggac cccgatgtgc
     2701 agggcaactt cgggttcaaa ttcaccgaca ccccctggga ccaggtcctg gacgtggtcc
     2761 tgaagaacgc tggtctgggc aaggagatcc agaacggggt cctccgggtg gccaaggtgg
     2821 acaagctgca gaaggaggaa gaggagcgca agaagctgga ggagacaaag gccctggccg
     2881 gcgagctcca gaccatcacc cgccccctct cctatgccaa ggtcggcgaa gtccagaaga
     2941 tcctcaagga catgctcacc aagcgcggct cggccatcct ggatgaccga accaacaccc
     3001 tgatcatcac ggacctgccc cgcaacatct cggtcatcga cgacctgctc cagaccctgg
     3061 acgtgcagat ccagcaggtg cagatcgaag cccgggtggt cgaggccaat aagaactggc
     3121 agcgggaatt cggcgtcaag tggccccagt ccaacaacgg cagcgtgtcc atcggtagtg
     3181 gcgccggtgg caccggcacc ccttgggttg gccccacctc accttactgg aacggcacca
     3241 acctctcgaa cgacggacgg aacgccgtcg cctggtcgcc gggcaaggac ggcgccacct
     3301 ccatcaccgc ccccgcgggc gaggtgtggc tctccttcct gagccagagc ctgagcgtca
     3361 acctggttct gcaggccctt gaaaaggacg gcaccctcaa gatcgtgtct tcacccaagg
     3421 tggtcaccca gaacaacaag aaggccacca tcctcagcgg cgagaagatc ccctatccca
     3481 cccagcaggg cggggcccag ggcggcgcca tcaccgtggc cttcatcgac gcgaatctcc
     3541 agctcgacgt cacgccccag atcaccaatg aaggcaccat catcatggat ctgaaggtgg
     3601 agaaggccga agcggacttc acccgcacgg tcaacggcac gcccaccatc atccgcaagg
     3661 ccatcgagac ccaggtgctg gtgcgggacg gcggcacggc ggtgctgggc ggcgtctaca
     3721 tcaccaactc ctccacgggc cggaccgggg tgcccttcct gtcgaagatc cccctcatcg
     3781 gcttcctctt ccgcaacgac accaaggcgg agaagaacgt cgagctgctg atcttcatca
     3841 ccccccgggt catccgccaa taggccggcc ccggaacgcg aaaacggccc cgcgaggggc
     3901 cgtttttcat gggggtggaa ggacctactt ggcgatgggc agggtgcgga cgaggcgctt
     3961 gcagctgttg cagagaatgg tgaagttgtc cgcctgctcg aagtggtact tgaacccggg
     4021 atcttcggcg accttctcca ggtggccaaa gcggtactcg gcgatgcgca cgctctgggg
     4081 ggcggtcaga tcggcgccgc agtgggtgca ggaaatggcg gccatgcttg ctcctcggga
     4141 aggctgggct tcaggaatgg aagaatttcc agagccccca gcttagcaga gccagcgcgg
     4201 ccaggccgat gaagagccgc agcagcgccc ggccgatccg atatgcgaca tagatcacga
     4261 agagcgccgc cagcccggca aggatcagca ccggcgtggt catgttcgct tcccgcggag
     4321 gtcccacgta tgaaatccgc ggcgcgcctt gcggccgatg gctccctccg ccacccgcct
     4381 acggagcgac tcgggcggtt ggaagcgcgc ctccccggcg gcggccaggc cctcggcgat
     4441 ctgcaggcga aggtccagcc ccacccggtc actgagttcc agcgggccca ccggatggcc
     4501 gtagcccagg gtcatgaggg catccaggtc ctcagcggtg gccacgccag cctcgagcag
     4561 gcgcatggcc tcgagcccct gggcgagggc catgcgggag gcggcgaaac cgggctgatc
     4621 ccgcaccggg atgatccgct tcccgagggc ctggcccagg gcccgggcgc gggtcaccca
     4681 ccgggtcccg gtgtccgggg ccacggccat ctccaccacg gccatgcggg gcaccggcac
     4741 gaagaggtgg aaacccacca ggcggccggc gaggccggag cgctgcgcca gtccggagat
     4801 gggaagggaa gatgtgcccg agaggatggt caggtccggc gaaccccacc ggcctgcgga
     4861 ggcgagggcc gtggccttgg cttccgcgtg ttccggcagg gcttccaaca ggacatccac
     4921 gccctccagg ctggccgcct caaaggcatg agccgtcagg cggccctggg caatgccttc
     4981 gccccagcgt ttctggatct cttgtcgtcc cgtttcggca tgggccttgt cccggcccag
     5041 caggcgcacc tcaaggccgc actcgacggc ccactgcgcg gcagagcggc ccagaacccc
     5101 ggggccgagg atggcgagaa tcccggtcaa gcccgctctc cgcgcccagg aatccggcat
     5161 tccaggtggt cctggcagag tccctcccag accaccgctc ggccggtgtt gaaggccttc
     5221 acgatggagc ccttgccgcc ggccaccagg tcccccgcca ggtagagccc cgggacgttc
     5281 gaatggaacc ggtggtccac cagggggcgc ttcccgtcga gggcgactcc ggcctgcttg
     5341 aggaagccgt cgggcgtgct gccgcccagg gcgtacagca cgtggtggaa ccgggccgcg
     5401 cggccgtcct tgaaggtcac ctccaccgcg ggagccccac ctgtgtcgcc cagcgcctgg
     5461 atgtcggccc ggcgccagac ctcgacctgg ccggcccgct ccagatcctc gaggatccgg
     5521 cggttcacgt cattggcctt ggagaattcc tcgccgcggt aggccagggt cacgggacgc
     5581 tccgcgtaca ggtaggcggc gtattccagg gccgtgttgc cgccccccac caccagcacg
     5641 gtgcgccctt tgtagagata cccgtcgcag gtggcgcaat agttcacgcc gtggccgaag
     5701 tattcggtct cgccggggac ttccagcttg cgccacttgg ccccggtggc gatcagcaaa
     5761 actttggcct tgatggtgat ggacgccgtg gccgccgtga cccccgcttc tcccgcgctc
     5821 aggctgacgg gctcctcggg aagaatctcg cagtactggc gcgcctgcgc cgccatgacc
     5881 tccatgaggg ccaggcccgg aatgttggag aaacccgggt agttctccac caccggggtc
     5941 acggcaacct gtccgccgat ggtgtccttc tccaggatga gcgtcttcag gcctgcgcgc
     6001 ccggcgtaga ttccggcagt cagcccggct gggccagcgc ccaggatcag gcagtccacg
     6061 ctgacggttt cgccgggctg atgcttgggg gccagaagct cggcctgcat gtctttcaac
     6121 gtgacgagct ccatggcgaa gcgggtctcc ggctccaggc cgagcacggt cagcttttcg
     6181 ttgaagacgg tgtggggcac gctgcccacg ttgtagcgct gggcaagctc caccatctgc
     6241 cccgtctcca cgcaccagac gctcacaagg tcggggcgtt ccacggcgca acggaaggcg
     6301 ttgaccgcct ggggcgggca gtagggacag gtgggggagg cgaacacctt gacggtgcgc
     6361 tcctcgtcca gggctttcag gatgtccttg gtggcgtcgg tgagccccga ttcccgttgg
     6421 gagaccatca gcaccgccgc aaggaagctg cgtccttcct cgcccatggg cgcgcccacg
     6481 aaccggatgc ggtagcgctc cggctccagg agcaccgtgg gcgagtaggt gacaccccac
     6541 ttcctggcgt cgtcgtctcc gatgcggtgc tggtgcagga tgatcttgtc gcagacacgg
     6601 gcgatatcgg cgctgaagcg ccgcaggtat tcgttgaaca cgtctccggt tccgggcagg
     6661 gtgaagatgt gcagatttac cgggtggagc atgtccacga agagggcgtt cagctgctcc
     6721 cggctttttt ccggcaggaa ccagtcctgt tcgggggtgg ggcctggcat gtccgaaacc
     6781 tcctgctcat tctggccgaa taattttttg aggatgttca tatgtatgcc ttccatacac
     6841 gcattcgctg cgtttgctca actccctttt ctttttcccg ccctgcgggt agagaatgac
     6901 ggaccatcag caaggagcaa atccatgagc gccaagcaac ccggcataga gaccctggca
     6961 ctgcacgcgg ggcagacccc ggacagccag acccgctcca gggccgtccc catctaccag
     7021 accacctcgt tcacattccg cgacaccgag cacgcagcga acctcttcgc gctgaaggag
     7081 ttcggattca tctattcgcg catcatgaac cccaccaacg acgtgctgga gaaccgtctg
     7141 gccgccatgc acggagccgc cgccgggctg gtgactgctt cgggcatgtc agccatcttc
     7201 tacgccgtgg cggccatcac ccaggccggg cagaacatcg tgtcaggctc gaacctctac
     7261 ggcggcacgg tgacgctgtt cgcccacacc ctcaagcgct tcggcatcga ggtgcgcttc
     7321 gtggattcgt ccgacccggc caacttcgcc aaggccatcg acgagaacac gcgcctcgtc
     7381 ttcaccgagt ccatcggcaa cccgcgctgc aacgtggacg atatggaggg gatcgccacg
     7441 gtggcccgaa agcacggcct gccgctcatc gtggacaaca ccgtgtcccc gccgccgatt
     7501 ctgaacccct tcgacttcgg agcg
//
LOCUS       DATGWW010000035         2052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_3334, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000035 DATGWW010000000
VERSION     DATGWW010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3334"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..328)
                     /locus_tag="VK150_00440"
     CDS             complement(<1..328)
                     /locus_tag="VK150_00440"
                     /inference="COORDINATES: protein motif:HMM:NF013378.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HLP29794.1"
                     /translation="MRRLKEVTVHRFREKASVFLTELHPARDAAERAAVLALLRKRDF
                     DATHHCSAWREGVPVAAFGADDDGEPSGTAGRPMLAVLEGADATDLIAVCIRWYGGTK
                     LGTGGLV"
     gene            438..>2052
                     /locus_tag="VK150_00445"
     CDS             438..>2052
                     /locus_tag="VK150_00445"
                     /inference="COORDINATES: protein motif:HMM:NF013436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HLP29795.1"
                     /translation="MNPVTVPFKPTPLKRVDPVPSDLDIAQAAALKPIGLVAAELGLQ
                     EQELEFYGPTKAKVRLEVLERLNERSNGRYVDVTAITPTPLGEGKTTTTVGLSQALGA
                     HLGKRVLTCIRQPSQGPTFGIKGGAAGGGYSQVIPMEDFNLHLTGDIHAITAAHNLCA
                     AAIDARILHEAGATDEQLFERLFPKAKGRRRFPKSLQLRCVKLGIKQGDPEAFTPEER
                     RRICRLDLDPAAITWRRVLDTSDRFLRGVTVGQGAEERAFARDTGFDIAVASEIMAIL
                     ALTTGLADLRHRLGAMVVGFNRQGEAVTAEDLGVAGAMTVLMKDALKPTLMQTLEGTP
                     VFVHAGPFANIAHGNSSILADQIALKLADYVITESGFGADMGMEKFFDIKCRVSGLVP
                     DAVVLVATVRALKMHGGGPKVTAGKPLDPVYVEENLDLLRRGLPNLVHHIRIARRFGI
                     PVVVAVNGFAADAPAELDLVRRASLESGAEDAVVCQNWSLGGEGALDLARAVMRVCDR
                     PSDFRFLYDLDEPIKQKIETIAREIYGADG"
BASE COUNT          341 a          734 c          681 g          296 t
ORIGIN      
        1 gcaccaggcc gccggtcccc agcttggttc cgccgtacca gcggatgcag actgcgatga
       61 ggtccgtggc gtcggccccc tcgagcaccg ccagcatggg ccgccccgcg gtgcccgacg
      121 gctcgccgtc gtcgtccgcg ccaaaagccg ccacgggcac gccctcccgc cacgcgctgc
      181 agtgatgggt ggcgtcgaaa tcgcgcttgc gcaaaagagc gagcacggcg gcccgctcgg
      241 cggcgtcccg ggcagggtgg agttccgtga ggaagaccga ggccttctcg cggaaccggt
      301 ggaccgtgac ctccttcaag cgacgcatga atccagcatg gatgcggctg tgacgggaat
      361 caactgccgt cgatcgatca cgacccaacg gtcattttaa acctatcctt gaaggtggat
      421 ctttccaagg agacggcatg aatcccgtca cggtgccctt caagcccacg ccgctgaagc
      481 gggtggaccc tgtgccttcg gacctggaca tcgcccaggc cgcggcgctg aagcccatcg
      541 gcctcgtggc ggcggaactg ggcctccagg aacaggagct cgagttctac ggccccacca
      601 aggccaaggt ccggctggag gtgctggagc gtctgaatga acggtccaac gggcgatacg
      661 tcgacgtcac cgccatcacg cccacgccgc tgggggaggg caagaccacc accaccgtcg
      721 gcctcagcca ggccctgggc gcccacctgg gcaagcgcgt cctcacctgc atccgccagc
      781 ccagccaggg ccctaccttc ggcatcaagg ggggcgcggc ggggggcggc tacagccagg
      841 tgatccccat ggaggacttc aacctccacc tcaccggcga catccacgcc atcacggcgg
      901 cgcacaacct ctgcgccgcg gccatcgacg cgcgcatcct gcacgaagcc ggcgccaccg
      961 atgagcagct gttcgagcgc ctcttcccca aggccaaggg ccggcgccgc ttccccaagt
     1021 cgctgcagct gcgctgcgtg aaactcggaa tcaagcaggg ggatcccgag gcgttcaccc
     1081 ccgaggaacg ccgccgcatc tgccgcctgg atctggatcc cgcggccatc acctggcgcc
     1141 gggtcctgga taccagcgac cgcttcctgc ggggcgtgac ggtggggcag ggcgccgagg
     1201 agcgggcctt cgcccgggac acgggcttcg acatcgccgt ggccagcgag atcatggcga
     1261 tcctggccct caccacgggg ctggcggacc tgcgccaccg cctgggcgcc atggtggtgg
     1321 gcttcaaccg ccagggcgag gccgtcacgg cggaagatct gggcgtggcc ggcgccatga
     1381 ccgtgctcat gaaggacgcg ctgaagccca cgctcatgca gaccctcgaa ggcacgccgg
     1441 tcttcgtgca tgccggaccc ttcgccaaca tcgcccacgg aaacagctcc atcctggccg
     1501 atcagatcgc cctcaagctg gcggactacg tcatcaccga atccggcttc ggcgccgaca
     1561 tgggcatgga gaagttcttc gacatcaaat gtcgggtttc cggcctggtg ccggacgccg
     1621 tggtgctggt ggccacggtg cgcgccctca agatgcacgg cggcggcccc aaggtcacgg
     1681 cgggcaagcc cctcgatccg gtctacgtgg aggagaacct cgacctcctg cgccggggcc
     1741 tgcccaacct ggtgcaccac atccgcatcg cccgcaggtt cggcatcccg gtggtggtgg
     1801 ccgtgaacgg cttcgcggcc gacgctcccg cagagctcga cctggtgcgc cgggcttcgc
     1861 tggagagcgg cgccgaggac gcggtggtct gccagaactg gtccttgggc ggcgagggcg
     1921 ccctggacct ggcccgggcc gtcatgcggg tctgcgaccg gccctcggat ttccgattcc
     1981 tctacgacct ggacgagccc atcaagcaga agatcgagac catcgcccgg gagatctacg
     2041 gcgccgacgg cg
//
LOCUS       DATGWW010000036         2706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_318601, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000036 DATGWW010000000
VERSION     DATGWW010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2706
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_318601"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..370)
                     /locus_tag="VK150_00450"
     CDS             complement(<1..370)
                     /locus_tag="VK150_00450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29796.1"
                     /translation="MIKPLALRLWSFLKSFQLTIVLLALLMALVVLCTLAQVDMGTQG
                     AVNAYMRSFLVWKHFASVPFGVPVFPGGALVGLLLTINLIGKTLDIKLSWGRSGMWLV
                     HAGLVILFAGEFVAGMMQVDT"
     gene            complement(363..1007)
                     /locus_tag="VK150_00455"
     CDS             complement(363..1007)
                     /locus_tag="VK150_00455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29797.1"
                     /translation="MPNPLTSPRTSSVLPVALLAFAGLAALSLGCRADQVAHYRVPKE
                     AAASHPDHPGHAEESMAAPAGAELPAPPAPTGQGALKWSLPKGWSAQGGSGMRYATFQ
                     APVAGKVEATVVVLPGPAGGELANVNRWRNQIGLPPLDEAGLAKARTVLKTKAGALNV
                     YDFISDGQAKSRTVAGYIATADGNTWFLKMTGDADPVAKARPDFMRILESIHLD"
     gene            complement(1078..1323)
                     /locus_tag="VK150_00460"
     CDS             complement(1078..1323)
                     /locus_tag="VK150_00460"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: protein motif:HMM:NF002017.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HLP29798.1"
                     /translation="MSWIETDGSLVREFRTPDFMTSFRLVSALVEPAEALQHHPDITF
                     GWGHVRVVLTTHDAGGLTDLDFQLAKAIDIAVKPFGL"
     gene            complement(1320..>2706)
                     /locus_tag="VK150_00465"
     CDS             complement(1320..>2706)
                     /locus_tag="VK150_00465"
                     /EC_number="1.14.16.-"
                     /inference="COORDINATES: protein motif:HMM:NF010657.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0009072 - aromatic amino acid metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aromatic amino acid hydroxylase"
                     /protein_id="HLP29799.1"
                     /translation="ERIPSLDDMNERLQHLGWSAVGVRGFIPPAVFTELQSLGVLAIA
                     ADIRSHEHIGYTPAPDIVHESAGHAPILADRRYAEYLKRCGEAGFRAIASVEDQAVYE
                     AIRNLSVVKEDPAARPEEITLAEERLRAASASRRYVSESTRASRLYWWTAEYGLVGDL
                     AQPKLYGAGLLSSLGEAEHCLTDAVKKVPLSLACADTEYDITRMQPQLFVARDFDQLF
                     EVLEAFEASLGWRRGGDHGLEEALRARTVNHLVLDGGLELTGKVVARTPARRELRPGL
                     GTALVRLEGPVLLSRGGKAEGRPWPGEALVAFGSADLPRRGEFSLDLPSGLFLTGFRV
                     GEHEVINLRGHQDGRPLDLPSWALLLLSEELPSVAGGPADPGAWDHWFGDPGSLAEGE
                     AEAQARERKASSLPEDVAQLYRDIRALREGGSPDPADVQALRARSAAHPDEWLLQAEL
                     AELESGLEVAR"
BASE COUNT          414 a          892 c         1007 g          393 t
ORIGIN      
        1 gcgtatccac ctgcatcatg ccggccacga actcgccggc gaacaggatg accaggccgg
       61 cgtggacgag ccacatgccg gagcggcccc agcttagctt gatgtccagc gtcttgccga
      121 tgaggttgat ggtgagcagc aggcccacca gcgcgccgcc tgggaatacc ggtacgccga
      181 agggcacgga ggcgaagtgc ttccagacga ggaagctgcg catgtaggcg ttcacggcgc
      241 cctgggtgcc catgtccacc tgggccaggg tgcagagcac caccagcgcc atgaggaggg
      301 ccagcaggac gatggtcagc tggaaggatt tcaggaacga ccagaggcgg agggcgagtg
      361 gcttaatcaa ggtggatgct ctccaggatg cgcatgaagt cggggcgtgc cttggccacg
      421 gggtcggcat cccccgtcat cttcaggaac caggtgttcc cgtcggccgt ggcgatgtag
      481 ccggccacgg tgcgggactt ggcctggccg tcgctgatga aatcgtagac gttcagcgcg
      541 ccggccttgg tcttcaggac ggtgcgcgcc ttggcgaggc ccgcctcgtc gagaggaggc
      601 aggccgatct ggttgcgcca gcggttcacg ttggcgagct cacccccggc ggggccaggc
      661 agcacgacca cggtggcttc caccttgccg gccacgggag cctggaaggt ggcgtagcgc
      721 atgccgctgc cgccctgggc gctccagccc ttgggcaggg accacttcaa tgcgccttgg
      781 ccggtgggag cgggcggcgc gggcaattcg gcgcccgcag gggcggccat ggactcctcg
      841 gcgtggcccg ggtggtcggg atgcgaggcc gcggcctcct tgggcacccg gtagtgggcc
      901 acttggtcgg cccggcagcc gaggctgagg gcggccagac cggcgaaggc gaggagggcg
      961 accggcagga cggatgaggt acggggggag gtcagcgggt tcggcaaggg actcctcgtt
     1021 ggacgttaca gaataacgga ccttccaggg gatggacagg tcggaatccg ccaaatctca
     1081 tagaccaaaa ggcttaactg ctatgtcaat ggcctttgcc aactggaaat ccaggtccgt
     1141 gagacccccg gcatcgtggg tggtgaggac cacccggaca tggccccagc cgaaggtgat
     1201 gtcggggtgg tgctgcagcg cctcggcggg ctcgaccagg gcgctcacca gccggaacga
     1261 ggtcatgaaa tcgggcgtcc ggaactcccg gacgaggctg ccatcggttt cgatccagct
     1321 catcgcgcca cctccagtcc tgattccaac tccgccaatt cggcctgcag caaccattcg
     1381 tccggatggg cggccgagcg ggcgcggagc gcctggacgt ctgccgggtc gggcgagccc
     1441 ccttcgcgga gggcacggat gtcccggtag agctgcgcca cgtcctccgg cagcgacgag
     1501 gccttgcgct cccgggcctg ggcctccgcc tcaccctcgg ccagggagcc gggatcgccg
     1561 aaccagtggt cccaggcgcc ggggtccgcg gggccgccgg ctacagacgg gagttcctcg
     1621 ctgagcagaa gcagcgccca gctgggcagg tcgagggggc ggccgtcctg gtggccgcgg
     1681 aggttgatca cctcgtgctc gcccacccgg aaccccgtga ggaagaggcc ggagggcagg
     1741 tcgaggctga attcgccgcg gcggggcagg tcggcggaac cgaaggccac gagggcctcg
     1801 ccgggccagg gccggccctc cgccttgccg ccccgggaga gcagcacggg accctccagg
     1861 cggaccaggg ctgtgccgag gccgggccgc aactcgcgcc gggcgggcgt gcgggcgacg
     1921 accttgcccg tgagctcgag cccgccatcc aggacgaggt ggttcacggt gcgggcgcgc
     1981 agggcttctt caaggccgtg atcgccgccc cgccgccagc ccaggctggc ctcgaaggcc
     2041 tcgagcacct cgaagagctg gtcgaagtcc cgagccacga agagctgggg ctgcatgcgg
     2101 gtgatgtcgt attcggtgtc ggcgcaggcc aggctcaggg gaaccttctt caccgcgtcg
     2161 gtcaggcagt gctccgcctc gcccaggctg ctgaggaggc cggcgccgta gagtttcggc
     2221 tgggccaggt cgccgaccag cccgtactcc gccgtccacc agtagaggcg gctcgcccgg
     2281 gtgctctcgc tgacgtagcg ccggctcgcg cttgcggccc gcaggcgctc ctccgcgagg
     2341 gtgatctcct cgggccgggc ggcggggtcc tccttcacca cgctgaggtt gcggatggcc
     2401 tcgtagacgg cctggtcctc caccgaggcg atggcccgga acccggcctc gccgcagcgc
     2461 ttcaggtact cggcataccg gcggtccgcc aggatcggcg cgtggccggc gctctcgtgc
     2521 acgatgtcgg gcgcgggggt gtagccgatg tgctcgtggc tgcggatgtc cgccgcgatg
     2581 gccagcacgc cgagggactg cagctcggtg aagacggcgg gcggaatgaa gccgcgcacc
     2641 cccacggcgg accagcccag gtgctgcagc cgctcgttca tgtcatccag gctggggatc
     2701 cgctcc
//
LOCUS       DATGWW010000037         4997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_363499, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000037 DATGWW010000000
VERSION     DATGWW010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4997
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363499"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1330
                     /locus_tag="VK150_00470"
     CDS             <1..1330
                     /locus_tag="VK150_00470"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP29800.1"
                     /translation="RVMDSLIFAASMLFLLWVLGVQGSLRSADQGVGLRVLAAYLNVA
                     LLGGGLVFMTSYHPDRVRGPLGWLAASALAWLAALTAWTLSGLPSVIAREGWIILAGA
                     IPLFQGLAAWSSRSVEEVLIGGSPDRRVAGLLPYLPVTLAVLTFAALLTWSPSNVTRG
                     TFAIFLVMVVLLLLRQFQAIQDLRAARRTLEVRVIERTRALEQAQDTLLRTERMNTLA
                     LMGAGLAHDLNNLLTAVRSSAELVALNMEAGTGPKPQDLSRIVVAADSAAQLTGRLMA
                     FARREAEDLLPMDLGLGVREMEATLRLLVPPAIDLRIEVAQESALIVRTSRLRLEQML
                     VNLVANAGDAMPRGGKLTIRVQAGPGEDYAMVEVIDSGLGMSPATLERIFDPFFTTKA
                     PGKGTGLGLPSLKALLDESGGSLTVQSELGKGSRFRILLPVIPALELNPR"
     gene            complement(1317..1514)
                     /gene="thiS"
                     /locus_tag="VK150_00475"
     CDS             complement(1317..1514)
                     /gene="thiS"
                     /locus_tag="VK150_00475"
                     /inference="COORDINATES: protein motif:HMM:TIGR01683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HLP29801.1"
                     /translation="MILVNEEPLDWHEGMTVRDVIRARNYRFPMLVVHVGDTLVPKKD
                     YDTTIIPDGAVVKVIHLISGG"
     gene            complement(1582..3810)
                     /locus_tag="VK150_00480"
     CDS             complement(1582..3810)
                     /locus_tag="VK150_00480"
                     /inference="COORDINATES: protein motif:HMM:NF013481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016625 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, iron-sulfur
                     protein as acceptor [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase C-terminal
                     domain-containing protein"
                     /protein_id="HLP29802.1"
                     /translation="MSQLVFDPSKVMNIDHTKRTEYLDGLEAIKAAHKVLKEVAYTPS
                     LPDKGYTNRTLYVNVDTLEIKEKPVTQQMKDVFIGGRGFGLYHLWNAVKPTTRWNDPE
                     NEIIISPGPVAGITQYAGTGKSLVVSLSPQTDIPIDSNVGGFYGPLLKFSGFDALELQ
                     GKSDKDIIVFIDGVKGLIRIEEAPADPVDSHVLAEVLTHMYAENEADLPNISVVSTGA
                     AAEHSLIGMLNFSFYDRRRKCVRFKQAGRGGIGTVFRNKRIRALVVRGPKVAGDMNHP
                     ADPETIAKTGVKYHKEIRENDPHQCMMRRNGTAHIVEIMDAYDLLPVHNFQYGSHPDV
                     HKIDSSYWQQRCTQVTVDGCWYGCSMACAKGADGLTVRTGPYKGHLVSVDGPEYENAA
                     GLGSNCGVFDPDYLLELNFDCDTYGICTITYGTLTAFVMECYQRGILNKERTGGLEMT
                     WGNAEADLEMMHQMARGEGFGKIAGMGVKKMKEYFIQQGWGDPQLINDIGMENKGLEY
                     SQYMSKESLAQQGGYALTNKGPQHDEAWLIFMDMVNKQLPTFEDKAEALYYFPLFRTW
                     FGLNGFCKLPWNDVVPADNASQPEPHKVPEHVQNYVDLFSATAGIKITKEDLITQSAK
                     VYNFQRVFNIRMGKGLRLHDAAPYRSLGPVTKEEYESRAERYDQQIVTEMGLDPKGKT
                     TEEKMALHREWRTGRFSKLMDSVYTRRGWTLDGVPTLARLKELGLDAFPEVVDVVKQH
                     LS"
     gene            complement(3825..4247)
                     /locus_tag="VK150_00485"
     CDS             complement(3825..4247)
                     /locus_tag="VK150_00485"
                     /inference="COORDINATES: protein motif:HMM:NF024585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HLP29803.1"
                     /translation="MKQLVIDFKKCDAGRNCEHECELECAVKVFKVDDPTQAALQIKA
                     YEDGGGHAILCDQCGDCVVVCPTEALKRNKLGVVMIDKKVCVGCYMCIGFCEKEAFMR
                     NSDWITPHKCTSCGICVKVCPHGALSIVDVPEPPVRII"
     gene            complement(4359..>4997)
                     /locus_tag="VK150_00490"
     CDS             complement(4359..>4997)
                     /locus_tag="VK150_00490"
                     /inference="COORDINATES: protein motif:HMM:NF019998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HLP29804.1"
                     /translation="FLDEPFSALDAQTREGLLDDLGHILAETGTTTVIATHDQAEATR
                     LGHRLAVMQAGRVLQMGGLREVVNHPEDPFVAAFVGMETLLKGQVLTCREGLLTLRIR
                     KESGDRDLVAVGEADPGQTVLVGVRPEHVVLALQSDNLTSARNAFPGTVTKVIPRGPY
                     FRVELDCGFYLTAFVTDQSLSELGLQPGSRVTASFKATSVHLIRKEGLDSEL"
BASE COUNT          732 a         1606 c         1697 g          962 t
ORIGIN      
        1 gcgggtgatg gacagcctca tcttcgcggc ctccatgctg ttcctgctct gggtgctggg
       61 ggtgcagggc tccctgcgtt cggcggacca gggcgtgggg ctgcgcgtcc tggccgccta
      121 cctgaatgtc gccctgctgg gcggcggcct ggtcttcatg acgtcctacc acccggaccg
      181 ggtgcggggt cccctgggat ggttggcggc ttccgccctg gcctggctgg cggcgctcac
      241 cgcctggacc ctgtcgggcc tgccatccgt gatcgcccgg gaggggtgga tcatcctggc
      301 gggcgccatc cccctcttcc aggggttggc cgcctggtcc tcgcggtccg tcgaggaggt
      361 gctcatcggc ggcagcccgg atcgccgcgt ggcgggcctg ctcccgtacc tgcctgtcac
      421 cctcgcggtg ctgaccttcg cggctctcct cacctggtcg ccttcgaacg tgacgcgcgg
      481 aaccttcgcc attttccttg tgatggtggt cctcctcctg ttgcggcagt tccaggccat
      541 ccaggacctg cgggctgccc ggcgcaccct ggaagtccgc gtgatcgagc gcacccgggc
      601 cctggaacag gcccaggaca ccctcctccg caccgagcgc atgaacaccc tggcactcat
      661 gggggcaggg ctcgcccacg acttgaacaa cctgctgacc gccgttcgca gttccgcgga
      721 gctggtggcc ctgaacatgg aggcgggaac cgggccgaaa ccgcaggacc tctcccgcat
      781 cgtggtggcc gccgacagcg ccgcccagct cacgggccgt ctgatggcct tcgcccgccg
      841 ggaggccgag gatcttctcc ccatggacct gggcctcggc gtccgggaga tggaggcgac
      901 gctgcgcctc ctggtgccgc ccgccatcga cctgcgtatc gaggtggcgc aggagtcggc
      961 gctcatcgtc cggacctcgc ggctgcggtt ggagcagatg ctggtgaacc tcgtcgccaa
     1021 cgcaggcgac gccatgcccc gcggcggcaa gctcaccatc cgcgtgcagg cggggccggg
     1081 ggaggattac gccatggtgg aggtgatcga ttcaggcctg ggcatgagtc ccgcgaccct
     1141 ggaacggatc ttcgatccct tcttcaccac caaggccccg ggcaagggga cgggacttgg
     1201 gctcccatcc ctcaaggccc tgctcgacga aagcggtggc agcctgacgg tccagagcga
     1261 actcggcaag ggctcgcggt tccgcatcct gctgccggtg atccccgcgc tggagctcaa
     1321 cccccgctga tgaggtggat gaccttcacc acggcgccat cgggaatgat ggttgtgtcg
     1381 tagtcctttt tcgggaccag cgtgtcgccg acatggacga ccagcatggg gaaccggtag
     1441 ttacgcgccc ggatgacgtc gcgcaccgtc atgccctcat gccagtcgag cggttcctcg
     1501 ttcaccagga tcatggcgga tgcctgcctt ttcgcttggt cggtccagca gggacccggc
     1561 cgcttgcgcg ggcggatcct ctcaggaaag gtgctgcttg accacgtcca ccacctcggg
     1621 gaaggcatcg aggcccagct ctttcaggcg cgccagggtg ggcacgccgt ccagggtcca
     1681 gccccggcgg gtgtagacgc tgtccatgag cttggagaag cggccggtgc gccattcacg
     1741 gtgcagcgcc atcttttcct cggtggtctt gcccttggga tccaggccca tctcggtgac
     1801 gatctgctgg tcgtagcgct cggcgcggga ttcgtactct tccttcgtga cggggcccag
     1861 ggagcggtag ggcgccgcgt cgtgaaggcg cagccccttc cccatgcgga tgttgaacac
     1921 gcgctggaag ttgtagacct tggcggactg ggtgatcagg tcttccttgg tgatcttgat
     1981 gcccgcggtg gcgctgaaga ggtccacgta gttctgcacg tgctcgggca ccttgtgggg
     2041 ctcgggctgg gaggcgttgt cggcgggcac cacgtcgttc cagggcagct tgcagaagcc
     2101 gttgaggccg aaccaggtgc ggaacagggg gaagtagtag agcgcttcgg ccttgtcttc
     2161 aaaggtcggc aactgcttgt tcaccatgtc catgaagatc agccaggcct cgtcgtgctg
     2221 gggccccttg ttggtcagcg cgtagccgcc ctgctgggcc agcgattcct tcgacatgta
     2281 ctgggagtac tcgagcccct tgttctccat gccgatgtcg ttgatgagct gcggatcccc
     2341 ccagccctgc tggatgaagt actccttcat cttcttcacg cccatgccgg cgatcttgcc
     2401 gaatccttca ccgcgggcca tctggtgcat catctcgagg tcggcctcgg cgttgcccca
     2461 ggtcatctcc aggcccccgg tgcgctcctt gttgaggatg ccgcgctggt agcactccat
     2521 gacgaaggcc gtcagggtgc cgtaggtgat ggtgcagatg ccgtaggtgt cgcagtcgaa
     2581 gttcagctca agcaggtagt cggggtcgaa gacgccgcag ttggaaccaa ggcccgcggc
     2641 gttctcgtat tcggggccgt ccacggagac caggtggccc ttgtaggggc cggtcctcac
     2701 cgtgaggccg tccgcgccct tggcgcaggc catggagcag ccgtaccagc agccgtccac
     2761 ggtgacctgg gtgcagcgct gctgccagta gctggaatcg atcttgtgca catcaggatg
     2821 cgagccgtac tggaagttgt gaaccggcag caggtcgtag gcgtccatga tctcgacgat
     2881 gtgggccgtc ccgttgcgcc gcatcatgca ctgatggggg tcgttctcgc ggatctcctt
     2941 gtggtacttg acgcccgtct tggcgatggt ttcgggatct gccgggtggt tcatgtcgcc
     3001 ggccaccttg ggcccgcgca ccaccagggc ccggatgcgc ttgttccgga acacggtgcc
     3061 gatgccgccg cggcccgcct gcttgaagcg cacgcacttg cggcggcggt cgtagaagga
     3121 gaagttcagc atgccgatga ggctgtgctc ggcggccgcg cccgtggaga ccacggagat
     3181 gttgggcaga tcggcctcgt tctcggcgta catgtgggtc aggacttcgg ccagcacatg
     3241 gctgtccacg ggatccgccg gtgcctcctc gatgcggatg aggcccttca cgccgtcgat
     3301 gaagacgatg atgtccttgt cggacttgcc ctgcagttcc agcgcgtcaa agccggagaa
     3361 tttgaggagg gggccgtaga agccgcccac gttggagtcg atggggatgt ccgtctgggg
     3421 cgagaggctc accaccaggg acttcccggt gccggcgtat tgggtgatgc ccgccacggg
     3481 gcccgggctg atgatgatct cgttctcggg gtcgttccag cgggtggtgg gcttcaccgc
     3541 gttccagagg tggtagaggc cgaagccccg gccgccgatg aagacatcct tcatctgctg
     3601 cgtgacgggc ttctccttga tctcaagggt gtccacgttc acgtagagcg tgcggttggt
     3661 gtagcccttg tcgggcaggc tgggcgtgta ggcgacttcc ttcagcacct tgtgggcggc
     3721 cttgatggcc tcgagtccat cgaggtactc ggtgcgcttg gtgtggtcga tgttcatgac
     3781 cttgctggga tcgaaaacga gctggctcat gggttccctt tttctcagat gatccggacc
     3841 ggcggctcgg ggacgtccac gatggagagc gcgccgtggg ggcaaacctt cacgcagatg
     3901 ccgcaggacg tgcacttgtg gggcgtgatc cagtcggaat tccgcatgaa ggcctccttc
     3961 tcgcagaagc cgatgcacat gtagcagccc acgcagacct tcttgtcgat catcaccacg
     4021 cccagcttgt tgcgcttgag ggcctcggtg ggacagacca ccacgcagtc gccgcactgg
     4081 tcgcagagga tggcgtggcc gccgccatcc tcgtaggcct tgatctggag ggcggcctgg
     4141 gtggggtcat ccaccttgaa gaccttgacg gcgcattcca gctcgcactc gtgctcgcag
     4201 ttgcgccctg cgtcgcactt cttgaagtcg atcaccagct gtttcatggc gcgggcgcct
     4261 ccggaggggt tcaggaacgg caatgtcaac cggaggacgg tcatgccatc ccccaggtga
     4321 ggctattccc ggccctatcc ggccgcaatg gtcgccggtc acagttcgga gtcgagcccc
     4381 tccttgcgga tgagatggac ggaagtggcc ttgaaggagg ccgtgacgcg gcttccgggc
     4441 tgaagtccca gctcggacag ggattggtcg gtgacgaagg cggtcaggta gaacccgcaa
     4501 tccagctcca cgcggaagta ggggccccgg ggtatgactt tcgtcacagt ccccgggaag
     4561 gcgttccggg cgctggtcag gttgtcggat tgcaaagcca gcaccacgtg ctccgggcgg
     4621 acccccacca gcaccgtctg gccgggatcg gcctcgccga cggcgaccag gtcgcggtcc
     4681 ccgctctcct tccggatccg cagcgtgagc aggccttccc ggcaggtcag cacctggccc
     4741 ttcagcagcg tctccatgcc gacgaaggct gccacgaagg gatcctccgg gtggttcacc
     4801 acttcccgca ggccgcccat ctggaggacg cgccccgcct gcatcaccgc gaggcgatgg
     4861 cccagccgcg tggcctccgc ctgatcgtgg gtggcgatca ccgtggtggt gccggtctcc
     4921 gccaggatgt gccccaggtc gtcgaggagc ccctcgcggg tctgggcgtc cagcgccgag
     4981 aagggctcgt ccaggaa
//
LOCUS       DATGWW010000038         1693 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_274160, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000038 DATGWW010000000
VERSION     DATGWW010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_274160"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..517
                     /locus_tag="VK150_00495"
     CDS             <1..517
                     /locus_tag="VK150_00495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29805.1"
                     /translation="LTGSQVINAGATSGGDALSLLKLDELIDQVVDPTHLIMNKTMRR
                     LLSQASRTTGVGGFITWEKDNFGQQIAYYAGLPIITLDLDNSSSAILPFTEANPGGGA
                     AASTSIYAVSFREGMLTGIQGGDPEARDLGELQTKPCMRTRVEWNSGIACFHGRAAAR
                     LQGIKNAAVVA"
     gene            592..1014
                     /locus_tag="VK150_00500"
     CDS             592..1014
                     /locus_tag="VK150_00500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29806.1"
                     /translation="MGKLHSQYTYDNNLLAKAAGLVAASADATILDLGAGFVSGDVVV
                     DVSAIEVATGDEKYDIQVLLSNSPTFAYGIVKAAQISLGNVTAPVDTVTGTGRFVIPF
                     HNEQNGTVYRYARLRTAVAGTIATGINYSAFVGIPTEN"
     gene            1069..1506
                     /locus_tag="VK150_00505"
     CDS             1069..1506
                     /locus_tag="VK150_00505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29807.1"
                     /translation="MKILKHLESGQEITVHDVDARDLLKTGEYESLGEAPGFKATKEA
                     AADALKVQVKVDGRPFSVEIKEALEALEGMKAELAARDARIAQLEAALAGNHVDLDAM
                     KAGELIDYAAKNGLDIGGLVPQSGQAKILAAVKESLAKKEAQP"
     gene            1503..>1693
                     /locus_tag="VK150_00510"
     CDS             1503..>1693
                     /locus_tag="VK150_00510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29808.1"
                     /translation="MSTTMRAKMVVNSVQRNVQHDGQVGSETVFMNPVCKSRAYPPDG
                     YDEDNTFAKFSPSGELRLV"
BASE COUNT          339 a          619 c          505 g          230 t
ORIGIN      
        1 cctcaccggc tcccaggtga tcaacgccgg ggccaccagc ggcggtgacg ccctgtccct
       61 gctcaagctg gacgagctga tcgaccaggt ggtggacccc acccacctga tcatgaacaa
      121 gaccatgcgc cggctcctga gccaggccag ccgcaccacg ggcgtgggcg gcttcatcac
      181 ctgggagaag gacaacttcg gccagcagat cgcctactac gccggcctgc ccatcatcac
      241 cctggacctg gacaacagct ccagcgccat cctgcccttc accgaagcca accccggcgg
      301 cggcgccgcg gcctcgacct cgatctacgc cgtgtccttc cgcgagggca tgctcaccgg
      361 catccagggc ggggaccccg aggctcgcga cctgggcgaa ctccagacca agccctgcat
      421 gcgcacccgc gtggagtgga acagcggcat cgcctgcttc catggccggg ccgccgcccg
      481 cctccagggc atcaagaacg ccgccgtcgt cgcgtaacgg gacgccccgg gggccaacct
      541 ccggggcttc cttccccatc cccccagacc cagccccacc aggagaacac catgggcaag
      601 ctgcacagcc agtacaccta cgacaacaac ctgctcgcca aggccgcggg cctcgtggcg
      661 gcttccgccg atgccaccat cctcgacctg ggcgctggct tcgtcagcgg cgacgtggtg
      721 gtggacgtga gcgccatcga agtcgccacc ggggacgaga agtacgacat ccaggtcctt
      781 ctctccaaca gccccacctt cgcctatggc atcgtgaagg ccgcgcagat cagcctgggc
      841 aacgtcaccg cccccgtgga caccgtgacc ggcaccgggc gcttcgtgat ccccttccac
      901 aacgagcaga acggcacggt ctaccgctac gcccgcctgc gcacggcggt cgccgggacc
      961 atcgccacgg gcatcaacta cagcgccttc gtcggcatcc ccaccgagaa ctagacctag
     1021 gcctgaagcg ggggagggca tcgccttccc ccgcgccaag gagatcccat gaagatcctg
     1081 aagcacctcg aatccggcca ggagatcacc gtccacgatg tggacgccag ggatctcctg
     1141 aagaccggcg aatacgaatc cctgggtgaa gcgccgggat tcaaggccac caaggaagcc
     1201 gccgccgatg ccctcaaggt ccaggtcaag gtggacggaa ggcccttctc cgtggaaatc
     1261 aaggaggctc tggaggcctt ggagggcatg aaggcggaac tcgccgcccg tgacgccagg
     1321 atcgcgcagc ttgaagccgc tctggccggg aaccacgtgg atctcgacgc catgaaggcc
     1381 ggcgagctga tcgactacgc agccaagaac ggcctggaca tcggcggcct cgtgccccag
     1441 tcgggccaag ccaagatcct cgccgccgtc aaggaatccc tcgccaagaa ggaggcccag
     1501 ccgtgagcac cacgatgcga gccaagatgg tcgtgaacag cgtccagcgc aacgtccagc
     1561 atgacggaca ggtgggcagc gagacggtgt tcatgaaccc cgtctgcaag tccagagcct
     1621 atccccctga cggatatgac gaggacaaca ccttcgccaa gttcagccct tccggggaac
     1681 ttcggctcgt cat
//
LOCUS       DATGWW010000039         1552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_410556, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000039 DATGWW010000000
VERSION     DATGWW010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410556"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..480
                     /locus_tag="VK150_00515"
     CDS             <1..480
                     /locus_tag="VK150_00515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29809.1"
                     /translation="TAVPWPTLPGPQLLEGLKLFSEERRILPFFDGYRDFQDVMAASG
                     QHDVAVLQAAAILKDAGRLEVLEPDAHVTVVPLKTGLFKKGDRLELSKAMEGWWTVLG
                     PYRQGIRNLRVIWPSGPAVERVEFVPTLPDNQLAMPRELMQAWGLAEGAHVKVRPAP"
     gene            500..1438
                     /locus_tag="VK150_00520"
     CDS             500..1438
                     /locus_tag="VK150_00520"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF016247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0050920 - regulation of chemotaxis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HLP29810.1"
                     /translation="MTESPEGQPLGGSPDSPDGLVAEFQARRERLDQRLVSLEQLIAD
                     LRQELQGDSQASLHRLAQAAQDMANGRVYQKVDIEAKGELGALVASINQTLMNLQQLD
                     ASVKHQSTQVPELASQLDAITTDTEEATQSVMNRLDTLMAAADDATRAVQTCQDGLNR
                     QKAHQGDLHQAVTGFLDRAAAGEDQNALAQEVLEFLFAHQMAAPAAEVDLAPAKTELQ
                     RVSDEAFEILNILQFQDITRQKIEKVVILLKQFQGGLNRLLVIFNIHTEALSGQGFSE
                     RKVATQDRIFDTSLEADSQKDSVDDIIAQFKKAGGN"
BASE COUNT          295 a          541 c          499 g          217 t
ORIGIN      
        1 accgccgtac cctggcccac cctgcccggc ccccagctgc tggagggcct caagctcttc
       61 tcggaggagc gccgcatcct gcccttcttc gacggctacc gggatttcca ggacgtcatg
      121 gccgcctcgg ggcagcatga cgtggccgtc cttcaggccg cggcgatctt gaaggatgcc
      181 ggacgcctgg aagtgctgga gccggacgcc cacgtgaccg tggtgcccct caagaccggc
      241 cttttcaaga aaggcgaccg cctggaactg tccaaggcca tggagggctg gtggaccgtg
      301 ctcggcccct accgccaggg catccggaac ctgcgggtga tctggccctc aggcccggcg
      361 gtggaacggg tggaattcgt gcccaccctg ccggacaacc agctggccat gcctcgggaa
      421 ctcatgcagg catggggtct ggccgaagga gcccatgtga aggtgaggcc cgccccgtga
      481 gggcacgtcc ggagttccca tgactgaatc cccagaaggt cagcccctcg gcggcagccc
      541 tgacagcccg gacggcctcg tggccgagtt ccaggcccgg cgggagcgcc tcgaccagcg
      601 gctggtgagc ctggagcagc tcatcgccga cctgcggcag gaactccagg gcgattccca
      661 ggccagcctg caccgccttg cccaggcggc ccaggacatg gccaacggcc gggtgtatca
      721 gaaagtggat atcgaggcca agggcgagct cggggccctc gtcgccagca tcaaccagac
      781 cctcatgaac ctgcagcagc tggacgcctc agtgaagcac cagagcaccc aggtgcctga
      841 gctggcttcc cagctggacg ccatcaccac ggacaccgag gaggccaccc agagcgtcat
      901 gaatcgcctg gacaccctca tggccgccgc cgatgacgcc acccgggccg tccagacctg
      961 ccaggatggc ctcaaccgac agaaggccca ccagggggac ctccaccagg ccgtcacggg
     1021 cttcctcgac cgggccgccg caggcgagga ccagaacgcc ctcgcccagg aagtgctgga
     1081 gttcctcttc gcccaccaga tggcggctcc ggcggccgag gtggacctgg ctccggcgaa
     1141 gaccgagctg cagcgggtga gcgacgaggc cttcgagatc ctgaacatcc tccagttcca
     1201 ggacatcacg cggcagaaga tcgagaaggt tgtgatcctg ctcaagcagt tccagggcgg
     1261 cctgaaccgc ctgctggtga tcttcaacat ccacacggag gccctctccg gccagggctt
     1321 ctccgagcgg aaggtcgcca cccaggaccg catcttcgac accagcctgg aagccgacag
     1381 ccagaaggac agcgtcgacg acatcatcgc ccagttcaag aaggccggcg gaaactgagc
     1441 ctgccccgat gcaggccacg cgacgttcag cctagaggtt caccacggtg acgcgaaacg
     1501 cgggggggtg gcacggagcc ctccgtggtg aattcttaac gattgaacgc ga
//
LOCUS       DATGWW010000040         1836 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_3777, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000040 DATGWW010000000
VERSION     DATGWW010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3777"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..400)
                     /locus_tag="VK150_00525"
     CDS             complement(<1..400)
                     /locus_tag="VK150_00525"
                     /inference="COORDINATES: protein motif:HMM:NF014132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HLP29811.1"
                     /translation="MPELFLPEKAQGLTVSVYYQVTGEGGGNYTCLIENGAFSLKREA
                     KPDATSVVVIGAEDWIALNEGKLDPMQAFMTGKLKGTGDLGLLQKFPKFFKKPQKQSG
                     PVKPLKDLVPARLGLAAGLKVTVGGDSWGDG"
     gene            complement(546..>1836)
                     /locus_tag="VK150_00530"
     CDS             complement(546..>1836)
                     /locus_tag="VK150_00530"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HLP29812.1"
                     /translation="LLRAIGWTLLHSLWQGAFLALLAGLALRWARSRSAELRYGIATG
                     ALLLLVLAAAGTLAWLSGNTGPELAADPLPVIAPGEGLSVPGWFFRLRIALTPMIPWL
                     FLAWILGFALRLAQLARSMAWLYGPCLNSLEAPPAQWSARFDELRIRSGVRVSVRLGL
                     SRQVDSLVVLGWLKPVVLIPAAALMALPPESLEALLAHELAHVRRGDFLANVLQTFAE
                     AMLFYHPAVWWLSRRIRLEREHCCDDAAVRACGDPILYASALTGLEELRTRPMLVPDL
                     APAASGGHLMSRIQRLLRPRVTRDLAVPLAAFLPALLLVSALGVVTLSAAAAPGASVK
                     EEPVSLEFSKVRVKHQPDPPAYPPEAKAARIQGTVVVGLTIGPDGRVTEAKALSGPPE
                     LQPCAIEYARAWEFEPVKVKGKPVSARFKLTMPFRLR"
BASE COUNT          330 a          588 c          668 g          250 t
ORIGIN      
        1 cgccgtcgcc ccaggagtcg ccccccaccg tcaccttgag gcccgccgcg aggcccagcc
       61 gggccggcac caggtccttc aggggtttca cggggccgct ttgcttctgg ggcttcttga
      121 agaacttggg gaatttctgg agcaggccca gatcaccggt gcccttgagc ttgccggtca
      181 tgaaggcctg catgggatcg agcttgcctt cgttgagggc gatccagtcc tcggcgccga
      241 tcaccacgac ggacgtggcg tcgggcttgg cttcgcgctt gagcgagaag gccccgttct
      301 cgatgaggca ggtgtagttc ccgccccctt cgccggtcac ctggtagtag acagagacgg
      361 tcaggccctg ggccttctcg ggcaggaaga gctcgggcat cagggcaaaa atgccatcca
      421 ccgtcaaagc catgggatca cctcggaatg ttggatcgag catggccggg ggtcctgact
      481 tcgcgcaacg gctaccagag gtcaggcagg cggccccgga gagccgcctg ccgtggggct
      541 tcaagctacc tcaggcggaa tggcatcgtg agtttgaagc gcgcggagac gggctttccc
      601 ttcaccttca cgggctcgaa ttcccaggcc cgggcgtact cgatggcaca gggctggagt
      661 tccggcgggc cggacagcgc cttggcctcg gtcacccggc catcggggcc gatggtgagg
      721 cccaccacca ccgtgccctg gatgcgggcg gccttcgctt cggggggata ggcgggcggg
      781 tcgggctgat gcttgacgcg caccttcgag aattccagcg agaccggttc ctccttcaca
      841 gaggctccag gcgcggccgc ggcggacagg gtgaccaccc cgagggccga gaccagcagc
      901 agggcgggca ggaaggcggc caggggcacg gccagatccc gggtcacccg gggacggagc
      961 aggcgttgaa tgcgggacat gagatgacct ccactggccg cgggggccag gtcgggaacg
     1021 agcatgggtc gagttcggag ttcctccagc ccggtgaggg cggaggcgta gaggatcgga
     1081 tcgccgcagg cgcgcacggc cgcgtcgtcg cagcagtgct cgcgctccag gcggatgcgc
     1141 cgggagagcc accagacggc gggatggtag aacagcatgg cttccgcgaa agtctggagg
     1201 acgttcgcga ggaaatcccc ccggcggaca tgagcgagtt cgtgggccag cagggcttcg
     1261 aggctttctg gaggcagcgc catcagcgcc gcggccggga tcagcaccac gggcttcaac
     1321 caccccagga cgaccaggga atccacctga cgtgagagcc ccagtcgaac ggacacccgc
     1381 acgccgcttc gaatccgcag ctcgtcgaac cgggcagacc attgcgcagg cggggcctcg
     1441 aggctgttga ggcaggggcc gtacagccac gccatggaac gggccagctg agccaggcgg
     1501 agcgcgaagc ccaggatcca ggccaggaac agccagggaa tcatgggcgt cagggcgatc
     1561 cgcaagcgaa agaaccaacc cggaacggac agcccttctc ccggcgcgat gaccggcagg
     1621 gggtcggccg ccagctccgg gccggtgttc ccggaaagcc atgccagggt tcccgcggcc
     1681 gccaggacca gaagcaggag ggctcccgtg gcgatgccat agcggagttc agcggaacgg
     1741 gaacgcgccc agcgcagcgc aaggcccgcc aggagggcca ggaaggcgcc ctgccagagg
     1801 ctgtggagca gggtccagcc gatggcccgg agaagc
//
LOCUS       DATGWW010000041         1517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_274421, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000041 DATGWW010000000
VERSION     DATGWW010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_274421"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..980)
                     /locus_tag="VK150_00535"
     CDS             complement(<1..980)
                     /locus_tag="VK150_00535"
                     /inference="COORDINATES: protein motif:HMM:NF024688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase
                     N-terminal domain-containing protein"
                     /protein_id="HLP29813.1"
                     /translation="MTKPQSPYPLLDSLSAPQQIRHFSPVQLEQLAAEVRAFLIASVS
                     ETGGHFSSNLGTVELTVALFHHFDFLKDRIVWDVGHQAYPHKILTGRKDRFPTLRMHH
                     GLSGFLKRDESPYDHFGAGHASTSISAVLGMAMARDLQKQDHACIAVIGDGSMTAGMA
                     FEALNQAGYLETKNFLVILNDNDMSINPNVGSLQGYLNQIMSGQYYHRWRDRIEHAIK
                     AIPLEGLSKGVAKAAKWSEESFKRLMVPGLLFEDLGFRYLGPVNGHDVHATSKALQEA
                     REKMKDGPVLLHVQTKKGYGYEPAVQDPLKWHGVTAFDAEAGEIIKVQGDP"
     gene            complement(989..>1517)
                     /locus_tag="VK150_00540"
     CDS             complement(989..>1517)
                     /locus_tag="VK150_00540"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HLP29814.1"
                     /translation="LTEAFGVLAAADLDPVRRAEALALLAEGAGWRGMAGGQALDLEG
                     EALAEYDLNHLRLIHRLKTGALLRASLEIGAVLGDASPSERRALRAYGEAIGLAFQIQ
                     DDILDATATDADLGKRAGKDAGRGKITYPSLLGLEGARKALSEATETALCHLASLPNR
                     NSLAAWARYLALRVK"
BASE COUNT          220 a          472 c          560 g          265 t
ORIGIN      
        1 gggtccccct gcaccttgat gatctcgccg gcctcggcat cgaaggcggt gacgccgtgc
       61 catttcagcg gatcctgcac cgcgggctcg tagccgtagc ccttcttggt ctgcacgtga
      121 agcaggacgg ggccgtcctt catcttctcg cgggcctcct gcagggcctt ggaggtggcg
      181 tgcacgtcgt ggccgttcac ggggcccagg tagcggaagc cgagatcctc gaagagcagg
      241 cccggcacca tgaggcgctt gaagctctcc tcgctccact tggcggcctt ggccacgccc
      301 ttgctgaggc cctccagcgg aatggccttg atggcgtgct cgatgcggtc gcgccaccgg
      361 tggtagtact ggcccgacat gatctggttg aggtagccct ggagcgaacc cacgttgggg
      421 ttgatgctca tgtcgttgtc gttgaggatc accaggaagt tcttcgtctc caggtagccg
      481 gcctggttga gggcctcgaa ggccatgccg gcggtcatgg agccgtcgcc gatgacggcg
      541 atgcaggcgt gatcctgctt ctggaggtcg cgggccatgg ccatgcccag caccgcggag
      601 atgctggtgc tggcgtgccc cgcgccgaag tggtcgtagg ggctctcgtc gcgtttgagg
      661 aaccccgaca ggccgtggtg catgcgcagg gtggggaagc ggtctttgcg gcccgtgagg
      721 atcttgtggg gataggcctg gtggcccacg tcccagacga tgcggtcctt caggaaatcg
      781 aagtggtgga aaagcgccac cgtcagctcg acggtgccga ggttcgagct gaagtggccg
      841 cccgtctcgg aaaccgatgc gatgaggaag gcgcgcacct ccgcggccag ctgctccaac
      901 tggacggggg agaagtggcg gatctgctgg ggtgcagaga gcgagtccag caggggatag
      961 gggctctggg gcttggtcac gcggcttcct acttgacccg cagcgccagg tatcgcgccc
     1021 aggctgccaa ggaattccgg ttgggaaggg aggctagatg acatagggcg gtctcggtgg
     1081 cttcgctcag ggccttgcgg gcgccctcca ggcccaggag ggaggggtag gtgatcttac
     1141 ccctgccggc atcctttccg gcccgcttgc ccagatccgc gtcggtggcg gtggcgtcca
     1201 ggatgtcgtc ctggatctgg aaggcgaggc cgatggcttc gccgtaggcc cggagcgccc
     1261 gccgttccga gggcgaggcg tcgccgagca ccgcgccgat ctccagggag gcccggagca
     1321 gcgcgccggt cttcaggcgg tggatgaggc ggaggtggtt caggtcgtac tcggcgaggg
     1381 cttccccctc caagtccagg gcctggccgc cggccatgcc gcgccagccg gcgccctccg
     1441 ccagcagcgc cagcgcctcg gcccgacgca cgggatcgag gtccgcggcg gccagtacgc
     1501 cgaaggcctc ggtgagc
//
LOCUS       DATGWW010000042         1810 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_410696, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000042 DATGWW010000000
VERSION     DATGWW010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410696"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..435
                     /locus_tag="VK150_00545"
     CDS             <1..435
                     /locus_tag="VK150_00545"
                     /inference="COORDINATES: protein motif:HMM:NF015150.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase family protein"
                     /protein_id="HLP29815.1"
                     /translation="NSILRIIHYPALRERYIQGGVRSSAHEDINLITLLPAATDSGLQ
                     LLDRDGAWHAVDGLAGEIVADAGDMLSRHVNLKIPSTTHRVVNPEDPDAVRYSMPFFC
                     HPRPEVLLDCPEGLLDPGEAKRFEPITANAFLLQRLREIGLI"
     gene            complement(383..>1810)
                     /locus_tag="VK150_00550"
     CDS             complement(383..>1810)
                     /locus_tag="VK150_00550"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing serine
                     protease family protein"
                     /protein_id="HLP29816.1"
                     /translation="GCAGFGMRLPGWLLLLAIQGAASAQQAVPPEPVPEAVSPALASA
                     QASVVLVQSRIGGGHIYQGSGVVVAPGLVATNAHVARGTQGHSVQQGLTSWPVVRVRQ
                     DLPHDLCLLYVPGLAVPVARVAPEPTQPGQPVMAVGYPGARLTVSRGHLRGIWHHGDG
                     RLLQSDALTLPGNSGGGLFDAEGRLLGLTTLTFTPSPRLNFSVPVAWIQALAAEPEGL
                     AETRPAGSLADRGTELLERLSQDPRNWPAWEGAARQWVRDLPEDGNAWLALGLARDRA
                     ARTAAESGAGPNPAASGAALEESVAAYRRALSLRQDAKTWNNLGVALDLLNQFDGAER
                     AFQEALRQEPGYALAWMNLGSARMNARRFAEAEAALQRGLLLQADDGNAWARLAHCQR
                     MAGHGAAAVETFRVALRYRPLNADLWLDLGLLLADLARREEARQVQVRLEDLNPEGAA
                     RLQAAISRIRSGRSPAAAGAGKRSR"
BASE COUNT          260 a          681 c          638 g          231 t
ORIGIN      
        1 aactccatcc tgcgcatcat ccactacccc gccctgcggg agcggtacat ccagggcggc
       61 gtgcgcagct ccgcccacga ggacatcaat ctcatcaccc tgctgccggc cgccacggat
      121 tcgggcctcc agctgctgga ccgcgacggc gcctggcacg cggtggacgg gctggccggg
      181 gagatcgtcg cggacgccgg tgacatgctg agccggcacg tgaacttgaa gatcccgagc
      241 accacccatc gcgtggtgaa cccggaggat ccagacgccg tgcgctactc catgcccttc
      301 ttctgccacc cccggcccga ggtcctgctc gactgcccgg aggggctgct cgatcccggc
      361 gaggccaagc gtttcgagcc catcaccgcg aacgctttcc tgctccagcg gctgcgggag
      421 atcggcctga tctgatccgg ctgatggcgg cctgcaggcg cgccgcgccc tcggggttca
      481 ggtcctcaag ccggacttgc acctgccggg cctcctcacg gcgcgccagg tcggccagca
      541 gcaggcccag gtccagccag agatccgcgt tcaggggacg gtaccgcagc gccacccgga
      601 aggtctccac cgcggccgcc ccatggcccg ccatgcgctg gcagtgggcc aggcgcgccc
      661 aggcattgcc atcgtcggcc tgcaagagga ggccccgctg gagggccgcc tcggcttcgg
      721 cgaagcggcg ggcgttcatg cgggcactgc caaggttcat ccaggcgagg gcgtagcccg
      781 gctcctgccg cagcgcctcc tggaaggccc gctccgcccc gtcgaactgg ttcaggaggt
      841 ccagggccac gcccaggttg ttccaggtct tcgcatcctg gcggagcgag agcgcacggc
      901 ggtaggccgc gacactctcc tccagcgcag cacccgaggc cgccggattc ggccccgccc
      961 cggattcggc ggcggtgcgg gcagcacggt cgcgggccag gcccagggcc agccaggcgt
     1021 tgccgtcctc gggcaggtcc cgcacccact ggcgggccgc gccctcccac gcgggccagt
     1081 tgcggggatc ctgcgacaac cgctcgagca gctccgtgcc ccggtcggcc aggctcccgg
     1141 cggggcgggt ctccgccaat ccttccggtt cggcggccag ggcctggatc caggccacgg
     1201 gcacggagaa attcagccgg gggctgggcg tgaaggtgag ggtcgtgagg cccagcagtc
     1261 ggccctcggc atcgaagagc ccgccgccgc tgttccccgg cagggtgagg gcgtcgctct
     1321 gaagcagacg gccgtcgccg tggtgccaga tgccacgcag gtgcccacgg gagacggtca
     1381 gcctggcgcc ggggtagccc accgccatca ccggctggcc gggctgcgtc ggctcgggcg
     1441 ccacgcgggc caccggcacc gcgagccccg gaacgtagag gaggcagagg tcgtggggaa
     1501 ggtcctggcg cacccggacc accggccagg aggtcagccc ctgctgcacg gaatgcccct
     1561 gggtgccccg cgccacgtgg gcgttggtag cgaccaggcc cggcgccacc accacgccgc
     1621 tgccctggta gatgtgaccg ccgccgatgc ggctctgcac cagcaccacg gacgcctgcg
     1681 ccgacgccag cgccggagag acggcctcag gaacgggttc gggaggcacg gcctgctggg
     1741 cggacgccgc cccctggatc gccaggagga gcagccagcc cggcagcctc attccgaatc
     1801 ctgcacaccc
//
LOCUS       DATGWW010000043         2238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_48942, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000043 DATGWW010000000
VERSION     DATGWW010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48942"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..820)
                     /locus_tag="VK150_00555"
     CDS             complement(<1..820)
                     /locus_tag="VK150_00555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29817.1"
                     /translation="MRTALLLTASVALFASRPLQVDDLFKVKKVSDPQLSTTGALAYQ
                     VGTVDFAANKTINHLWLKPASGAAKELDLGAGSQSRPRFSPDGKRLAYQAGGQVWVVD
                     LGTHEKRQLTKLSGGAEGQTWSPDGKWIAFLSTTVPSGVDAENAAYLKAKGESKVSGR
                     LYTTLTYRHWNEWKDAKQVSHLFVVPADGSAAPRDLTAGFTTDVPNYAGVSAGDGYAW
                     APDSKALAFESAPEQTKATSTNGEIYEVALAGGPAKKLSDNPAMDNTPRYSPDGK"
     gene            complement(836..1993)
                     /locus_tag="VK150_00560"
     CDS             complement(836..1993)
                     /locus_tag="VK150_00560"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLP29818.1"
                     /translation="MDVTLPEHVEALRQEVRRFAEKEIRPHVMAWDEAKTFPMDVVKQ
                     LGEMGMMGVIFPEEYGGAGMGYLEYAVVVEELSRVDGSVGITVAAHNSLCSNHIFAMG
                     SEAQKQKYLKPLASGQALGAWGLTEPGSGSDAGSLRTAAKKEGSHYVLNGTKTFITHG
                     TVGDIFVVMARTRPPQAGHSSADGISAFVLEKGMNGFRAGKQENKLGLRASDTSELIL
                     EDVKVPEANLLGEDGVGFKQAMKTLDGGRISIGALGLGMAQGAFEEAARYSKIRHTFG
                     KPLADHQGIQFKLADMGTEIEAARLLIYRAAGLKDQGLPYAKAASMAKLYSSEVACRV
                     ADQAVQILGGYGYIKDYPVEKYYRDVKLCTIGEGTSEIQRTVIARYLLSEY"
     gene            complement(2005..>2238)
                     /locus_tag="VK150_00565"
     CDS             complement(2005..>2238)
                     /locus_tag="VK150_00565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29819.1"
                     /translation="KLPISDQEWEANLPAMQEQISIELQNVAFGIEAGFKIQCEKDPV
                     ILKALEVLPEAESLLQKKQLLQRGAPTTAAAAL"
BASE COUNT          307 a          726 c          776 g          429 t
ORIGIN      
        1 acttgccatc cggcgagtag cggggggtgt tatccatggc ggggttgtcg ctgagcttct
       61 tcgcagggcc gccggcgagg gccacttcgt agatctcacc gttggtgctg gtggccttgg
      121 tctgctccgg ggccgattcg aaggccaggg ccttgctgtc cggcgcccag gcgtagccat
      181 ccccggccga gacgccggcg tagttgggca catcggtggt gaagcctgcg gtgaggtccc
      241 ggggcgcagc gctgccatcg gcgggcacca cgaagaggtg gctcacctgc ttggcatcct
      301 tccattcgtt ccagtggcgg taggtgaggg tggtgtagag gcggcccgaa accttggatt
      361 cacccttggc cttcaagtag gcggcgttct cagcatccac gccgctgggc acggtggtgc
      421 tgaggaaggc gatccacttg ccgtcggggc tccaggtctg gccttcggcg ccgccgctca
      481 gcttggtgag ctggcgcttc tcgtgggtgc cgaggtccac cacccacacc tggccacccg
      541 cctggtaggc cagccgcttg ccgtcggggc tgaagcgggg cctggactgg ctgccggcgc
      601 cgagatccag ctccttggca gcgccgctgg caggcttgag ccagaggtgg ttgatggtct
      661 tgttggcggc gaagtccacc gtgcccacct ggtaggccag ggcgcccgtg gtgctgagtt
      721 gcggatcgga gaccttcttc accttgaaga ggtcatccac ctgcagcggg cgcgaggcga
      781 acagggccac ggaggccgtg aggagaaggg cggtgcgcat gggaactccg ggggatcagt
      841 attcggagag caggtaccgc gcgatcacgg ttcgttggat ctcgctggtg ccttcgccga
      901 tggtgcagag cttcacgtcc cggtagtact tctccaccgg gtagtccttg atgtagccgt
      961 agccgccgag gatctgcacg gcctggtcgg ccacgcgaca ggccacctcg gagctgtaga
     1021 gcttggccat gctggcggcc ttggcgtagg gcaggccctg gtccttcagc cccgcggcgc
     1081 ggtagatcag caggcgggcg gcctcgatct cggtgcccat gtcggccagc ttgaactgga
     1141 tgccctggtg atcggccagc ggcttgccga aggtgtggcg gatcttgctg tagcgggccg
     1201 cctcctcgaa ggcgccttgg gccatgccga ggcccagggc cccgatgctg atgcggccgc
     1261 catccagcgt cttcatggcc tgcttgaagc ccacgccgtc ctcgcccagc aggttcgcct
     1321 cgggcacctt cacgtcctcg aggatcagct cggaggtatc gctggcccgg agacccagct
     1381 tgttctcctg cttgccggcc cggaagccgt tcatgccctt ctccagcacg aaggcgctga
     1441 taccgtcggc gctgctgtgg ccagcctggg gcggccgggt gcgggccatg accacgaaga
     1501 tgtcgcccac ggtgccatgg gtgatgaagg tcttggtgcc attcaagacg tagtgcgagc
     1561 cttccttctt cgcggcggtg cgcagcgagc ctgcgtcgct gcccgatcca ggctccgtga
     1621 ggccccaggc cccgagagcc tggccgctgg ccaggggctt caggtacttc tgcttctggg
     1681 cctcgctgcc catggcgaag atgtggttgc tgcagaggct gttgtgggcc gccacggtga
     1741 tgcccacgga gccgtccacc cgggacagct cctccaccac cacggcgtat tccaggtagc
     1801 ccatgccggc gccgccgtat tcctcgggga agatgacgcc catcatcccc atctcgccca
     1861 gctgcttcac cacgtccatg gggaaggtct tggcctcgtc ccaggccatc acgtggggcc
     1921 ggatctcctt ctccgcgaac ctgcgcactt cctggcgcag ggcctcgaca tgctcgggca
     1981 gcgtgacgtc catgggaacc tcgatcagag ggcggcggcg gccgtcgtgg gggcgccccg
     2041 ctgcaggagc tgcttcttct ggaggaggct ctcggcttcg ggcaggacct ccagggcctt
     2101 caggatcact gggtccttct cgcattggat cttgaacccg gcctcgatgc cgaaggccac
     2161 gttctgcagc tcgatggaga tctgctcctg catggcgggc aggttggcct cccactcctg
     2221 gtccgagatc ggcagctt
//
LOCUS       DATGWW010000044         3603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_48992, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000044 DATGWW010000000
VERSION     DATGWW010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3603
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48992"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1132)
                     /locus_tag="VK150_00570"
     CDS             complement(<1..1132)
                     /locus_tag="VK150_00570"
                     /inference="COORDINATES: protein motif:HMM:NF015724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HLP29820.1"
                     /translation="MRPLIPAALALLAVPAHAQFWSELANPKVEVTLVHPPGLGLKVE
                     RLAFAPSRDLNSRELADALTADLVQSRQVEVVDRAHLDAVLKEQELGASGYVEPATIA
                     KLGKLLGPSVLVIVNVNRSDVSRNQSSKEERSTDYKTKQEIVRHKRTSITSLDFSATV
                     QVVDLSTGRVFGAQRLEDAPSLSNTSYDGYPAYPRDSEVRRLAFETAKVKVLRMLLAW
                     SEVRKLTFFDDDTFGMAKAHQRLKAGDTRGALDQALDGLEQSKRDKGQKPKYYPRAHY
                     NVGIIHFIQGRYEDALPYLRTALDMQPDASIFQTALKECQEAIALQDALRKSERRAEP
                     VSHAEPKPTKPTPAASSATGKASPEERLQKLQELYKKGLLEKK"
     gene            1253..1699
                     /locus_tag="VK150_00575"
     CDS             1253..1699
                     /locus_tag="VK150_00575"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HLP29821.1"
                     /translation="MAHHYPLSLAWTGNTLDGTYNRNATVTTAGKHPLAVSSAPEYAG
                     DPTRWNPEDLLGSALATCHMLTFLALCAKAKVEVVGYEDHAEAVLDTVDKVTRITRVH
                     LRPVIRVTRGTSMAKVVELFEKAHKYCFVANSVTCEAVMEPRVVEV"
     gene            1710..2285
                     /gene="nrdR"
                     /locus_tag="VK150_00580"
     CDS             1710..2285
                     /gene="nrdR"
                     /locus_tag="VK150_00580"
                     /inference="COORDINATES: protein motif:HMM:TIGR00244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HLP29822.1"
                     /translation="MRCPFCGHLEDKVVDSRESREGDSIRRRRECLSCARRFTSYERV
                     EEVPLVILKKDGRREPFDRQKLMKGLLLACQKRPVSLARIEELVGDLQARLMERPDRE
                     IRSRELGELIMDELKGLDQVAYVRFASVYRDFKDLPDFVKALEGLMHKEAATGRAAQP
                     AAPPAETVKPLPQALFPSETVDVAALKGRKK"
     gene            2313..>3603
                     /locus_tag="VK150_00585"
     CDS             2313..>3603
                     /locus_tag="VK150_00585"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HLP29823.1"
                     /translation="MADDILLPPPTDEQPKLPEELPVLPLRDVVVYPYVILPLSISRE
                     KSIRAVDTALVENRMILLLSQKQTEMDNPRPEDLYQVGTAALIMRVLKLPDGRIRALV
                     QGLQRVRVEYFTETENLFKARVEPLAEPEMRSPDLEQDALLRSVKQTLEKAVALGKTL
                     PQEVLVIAGNLDNPGRLADLVASNLDLKLQQTQEVLEIAHPGQRLKRVNELLMREIQL
                     LEVQQKITMEARGEMDKSQREYYLRQQLKAIQQELGEGSELAEEIQAFRDKLAKLTVP
                     EEIQTEIERNLKKLERMHPDSSETAVTRTYLEWMTELPWGVQTEDNLDLKQAQTVLDE
                     DHYGLPKIKDRLLEFLAVRKLKPDLRGTILCFVGPPGVGKTSLGKSIARALGRKYSRI
                     SLGGVHDESEIRGHRRTYVGAMPGRIVQALHQVKSMNP"
BASE COUNT          607 a         1198 c         1228 g          570 t
ORIGIN      
        1 ccttcttctc cagcagtccc tttttgtaga gttcttgcag cttctgcagg cgttcttcgg
       61 ggctggcttt gccggtggcg gacgaggcgg caggggtggg cttcgtgggc ttgggttcgg
      121 cgtgggacac gggctcggcg cggcgctcgg atttccgcag ggcgtcctgc agggcgatgg
      181 cttcctggca ttccttcagg gcggtctgga agatgctggc gtcgggctgc atgtccaggg
      241 ccgtgcgcag gtagggcagg gcatcttcgt agcggccctg gatgaagtgg atgatgccca
      301 cgttgtagtg ggcccgcggg tagtacttgg gcttctggcc cttgtcgcgc ttggactgct
      361 cgaggccgtc cagggcctgg tccagggcgc cgcgggtgtc cccggccttg aggcgctggt
      421 gggccttcgc catgccgaag gtgtcgtcgt cgaagaaggt gagcttgcgc acctcgctcc
      481 aggccaggag catgcgcagc accttcacct tggcggtctc gaaggccagg cggcgcacct
      541 cggaatcccg cgggtaggcg gggtagccgt cgtacgaggt gttgctgagg ctcggcgcgt
      601 cctccaggcg ctgggcgcca aacacgcggc cggtgctgag gtccaccacc tgcacggtgg
      661 cgctgaaatc caggctggtg atgctggtgc gcttgtggcg gacgatctcc tgcttggtct
      721 tgtagtcggt gctgcgctct tccttgctgg actggttgcg gctcacgtcc gaacggttca
      781 cgttgacgat caccagcacg ctggggccca gcagcttgcc cagcttggcg atggtggcgg
      841 gctccacgta gccgctggcg cccagctcct gttctttcag caccgcgtcc aggtgggcgc
      901 ggtccaccac ctccacctgg cggctctgca ccaggtcggc ggtgagggca tcggccagtt
      961 cccgggagtt caggtcgcgg gaaggcgcga aggccaggcg ctccaccttg aggccgagac
     1021 ccggcgggtg cacgagggtg acctcgactt tcgggttggc cagctcgctc cagaactgcg
     1081 catgggcggg gacggccagc aaggccaggg cggcgggaat caacgggcgc atggagactc
     1141 cgggaaggcg gatccaggct agcacgcggc tggcggcccc ccggtcccgg gaggggcaag
     1201 ccgagggcca aacggttact ctgtcccaac gacgttgacg gaggagatcc ccatggccca
     1261 ccactacccc ctgtccctcg cctggaccgg caacaccctg gatggcacct acaaccgcaa
     1321 cgccaccgtc accaccgccg gcaagcaccc cctggccgta agcagcgccc ccgaatacgc
     1381 cggcgatccc acccgctgga accccgagga tctgctgggc tcggccctcg ccacctgcca
     1441 catgctgacc ttcctcgcgc tttgcgcgaa ggccaaggtt gaggtggtgg gctacgagga
     1501 tcacgccgag gccgtgctgg atacggtgga caaggtcacc cgcatcaccc gcgtgcacct
     1561 gcgcccggtc atccgcgtga cccgcggcac cagcatggcc aaggtcgtcg agctgttcga
     1621 gaaggcccac aagtactgct tcgtggccaa ttccgtcacc tgcgaggccg tgatggaacc
     1681 ccgcgtggtc gaggtgtaga aaggctgtcg tgcgctgccc cttctgcggt cacctcgagg
     1741 acaaggtggt ggactcccgc gagtcccgcg aaggcgattc cattcgccgc cgccgcgagt
     1801 gcctgtcctg cgcccgccgc ttcaccagct acgagcgggt ggaggaggtg cccctggtga
     1861 tcctcaagaa ggacggccgc cgcgagccct ttgatcgcca gaagctcatg aagggcctgc
     1921 tgctggcctg ccagaagcgg cccgtctcgc tggcccgcat cgaggagctg gtgggcgacc
     1981 tgcaggcccg gctcatggag cgccccgacc gcgagatccg cagccgcgag ctgggcgaac
     2041 tgatcatgga tgagctcaag ggcctcgacc aggtggccta tgtgcgcttc gccagcgtgt
     2101 accgcgactt caaggatctg ccggatttcg tgaaggcgct ggagggcctc atgcacaagg
     2161 aggccgccac gggccgcgcc gcgcaaccgg ccgccccgcc cgcggaaacc gtcaagccgc
     2221 tgccccaggc cctgttcccc agcgaaacgg tggatgtggc cgccctgaag ggccggaaaa
     2281 agtaggggta tcctgaaggt cgaggttctt ccgtggccga cgacattctc ctgccccccc
     2341 cgaccgatga gcagcccaag ctgcccgagg aactgccggt ccttccgctg cgggacgtgg
     2401 tggtctaccc gtacgtgatc ctgcccctca gcatcagccg cgagaagtcc atccgcgccg
     2461 tggacacggc cctggtggag aaccggatga tcctgctgct gtcgcaaaag cagacggaga
     2521 tggacaatcc gcgccccgaa gacctctacc aggtgggcac cgccgcgctg atcatgcgcg
     2581 tgctgaagct gccggacggc cgcatccgcg cgctggtgca gggcctccag cgggtccgcg
     2641 tggagtactt caccgagacc gagaacctct tcaaggcccg ggtggagccc ctggccgagc
     2701 ctgagatgag gtccccggac ctggagcagg acgcgctgct gcgcagcgtc aagcagaccc
     2761 tggagaaggc cgtggccctg ggcaagaccc tgccccagga ggtgctggtc atcgccggaa
     2821 acctcgacaa ccctggccgc ctggccgacc tggtggcctc gaacctggac ctcaagctgc
     2881 agcagaccca ggaagtgctg gagatcgccc acccgggcca gcgcctcaag cgggtgaacg
     2941 agctgctcat gcgggagatc cagctgctgg aagtgcagca gaagatcacc atggaagccc
     3001 gcggcgagat ggacaagagc cagcgggagt actacctccg ccagcagctc aaggccatcc
     3061 agcaggagct gggcgagggc agcgagctgg ccgaagagat ccaggccttc cgggacaagc
     3121 tggccaagct cacggtgccc gaggagatcc agacggagat cgagcgcaac ctgaaaaagc
     3181 tcgagcgcat gcacccggat tccagcgaaa ctgccgtcac gcggacctac ctggagtgga
     3241 tgaccgagct gccctggggt gtgcagaccg aagacaacct cgacctgaag caggcccaga
     3301 ccgtgctcga cgaggatcac tacggactgc ccaagatcaa ggaccgtctg ctggaattcc
     3361 tcgcggtgcg caagctcaag cccgacctgc gcggcaccat cctctgcttc gtggggcctc
     3421 cgggtgtcgg caagacgagt ctcggcaagt ccatcgcgag ggccctgggc cgcaagtact
     3481 cgcgcatctc cctgggcggc gtgcacgacg aaagcgagat ccgcggccac cgccgcacct
     3541 acgtgggcgc catgccgggc cgcatcgtgc aggccctgca ccaggtgaag agcatgaacc
     3601 ccg
//
LOCUS       DATGWW010000045         3619 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_363620, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000045 DATGWW010000000
VERSION     DATGWW010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3619
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363620"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(184..1941)
                     /locus_tag="VK150_00590"
     CDS             complement(184..1941)
                     /locus_tag="VK150_00590"
                     /inference="COORDINATES: protein motif:HMM:TIGR00717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HLP29824.1"
                     /translation="MSKLEAIIKGLGSKQMGRITVLDAGYVEDDTPEGQEFMAALQGE
                     TRGLREEEVVRGVVVEIRGKDVIVDIGYKGSGTVNLDEFNNPDGTQGVQVGDVVEVLL
                     EMLEDANGNVRLSRDRAEKMKIWDEVEKAFRSNMTVHGTVLEKVKGGLAVDIGIRAFL
                     PGSQVDMKPVRNLDPYLGKSFDMKVIKVNRRRGNIVLSRKLFLETINASLKEETLAGL
                     EEGKLVEGAIKNITEYGAFVDLGGVDGLLHITDMSWGRLNHPSEMFQVGDKVEVAILK
                     YDKDTERVSLGYKQKFPDPWLSVEERYPIQATVKGKVVSITDYGAFVELEPGIEGLVH
                     VSEMSWTKKVKSAKGMVNLGDQVEALILQVDSENRRISLGMKQITPNPWMAIAEKYQP
                     GMIVTGTVRNITEFGAFVELEEGIDGLIHVSDFSWTKKIKHPGEIVKKGDSVTAKVLN
                     LDPLAQRMSLGVKQMEPNVWEIFFENHNVGAVITGKIARLTDFGAFVDLGDGIEGLVH
                     VSELSRKRVEDIQKEFTAGQELTMKIVKLDPTERRIGLSVKQLEQDMERGDFEAAKAR
                     QPEFKKATLADAFNRAERE"
     gene            2192..>3619
                     /locus_tag="VK150_00595"
     CDS             2192..>3619
                     /locus_tag="VK150_00595"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP29825.1"
                     /translation="MQARTTALLYENVALAQGVAVVLALLLAAACGGRRPVAAAAWVS
                     AVLALALVRMGMARGFRRRVDTREAGLAWRRRAIAGVALSGLLWAGGSVLFMVGAPLA
                     QQSLTALVVAGMVAGAVPALGAVPAAFLAFAAPAVGAVFLCALLQARDITGWAIALAS
                     GIFLPAVLRSSRRFARVMAEAIRLGREQQLTNEALLAARDQALEASRAKSEFLATMSH
                     EIRTPMNGVIGMAGLLLDSHLDGEQRGYATTIQHSADALLAIINDILDFSRVESGRLD
                     LESLTFDLKGLVTEVAELLAFQAGVKGLELAVDVDPATPAWVVGDPGRLRQVLINLGS
                     NAIKFTPDGRVALRVSRAGGTDRRADLLFEVEDTGIGIPADRLPDLFNPFNQGDASMA
                     RRFGGTGLGLSISKRLIDLMGGALTATSQEGAGSQFRIHLSLPVADPPAPAVDTPEGP
                     EPAAAPGHLRVLVVEDNAINQRVVTR"
BASE COUNT          508 a         1208 c         1233 g          670 t
ORIGIN      
        1 ctgggggtgc tgcgttctga gggcggtggc cccggcgatc ccatccccgg ttcatccgaa
       61 gggactaacc gcgcgccgtc cgtggcggca tccgcgagcg gcggcggttt tcccgggatg
      121 cttgccttcc cccaccacga cgaagccccc tcgcgggggc ctcgtctgcg ggtggtacag
      181 gtgctactcg cgctctgccc ggttgaaggc atccgcgagg gtcgcctttt tgaactcggg
      241 ctggcgggcc ttggcggctt cgaagtcgcc gcgttccatg tcctgctcca gctgcttgac
      301 ggagaggccg atgcggcgct cggtgggatc gagcttcacg atcttcatgg tgagctcctg
      361 gccggcggtg aactccttct ggatgtcctc cacccgcttg cggctcagct cggagacgtg
      421 caccaggccc tcgatgccgt cgccgaggtc gacgaaggcg ccgaagtcgg tcaggcgggc
      481 gatcttgccg gtgatgacgg cgccgacatt gtggttctcg aagaagatct cccagacgtt
      541 gggctccatc tgcttcacgc cgaggctcat gcgctgggcc aggggatcca ggttgaggac
      601 cttggcggtg acgctgtcgc ccttcttcac gatctcgccg gggtgcttga tcttcttggt
      661 ccagctgaag tcggacacgt ggatcaggcc gtcgatgccc tcttccagct cgacgaaggc
      721 gccgaactcc gtgatgttgc gcacggtgcc cgtgacgatc atgccgggct ggtacttctc
      781 ggcgatggcc atccaggggt tgggggtgat ctgcttcatg ccgaggctga tgcggcggtt
      841 ctcgctatcc acctgcagga tcagggcctc gacctggtcg cccaggttga ccatgccctt
      901 ggcggacttg accttcttcg tccagctcat ctcggagacg tggacgaggc cctcaatgcc
      961 gggctccagc tccacgaatg cgccgtagtc ggtgatcgag acgaccttgc ccttgacggt
     1021 ggcctggatg ggatagcgct cctcgacgga gagccaggga tccgggaact tctgcttgta
     1081 gcccagggac acgcgctcgg tgtccttgtc gtacttgagg atggccacct cgaccttgtc
     1141 gcccacctgg aacatctcgc tggggtggtt caggcggccc caggacatgt cggtgatgtg
     1201 cagcaggccg tccacaccgc cgaggtcgac gaaggcgccg tattcggtga tgttcttgat
     1261 ggcgccctcg accagcttgc cttcctcgag gcccgcgagg gtctcttcct tcaggctcgc
     1321 gttgatggtc tcgaggaaca gcttgcggga cagcacgatg ttgccccggc ggcggttgac
     1381 cttgatgacc ttcatgtcga aggacttgcc gaggtaggga tccaggttgc ggacgggctt
     1441 catgtccacc tggctgccgg gcaggaacgc gcggatgccg atgtccacag ccagaccgcc
     1501 cttgaccttc tcgagcacgg tgccatgcac ggtcatgttg gaacggaagg ccttctccac
     1561 ttcgtcccag atcttcatct tctctgcgcg gtcgcgggag aggcgcacgt tgccgttggc
     1621 gtcctcgagc atttcgagca gcacttcgac cacgtcgccc acctggacgc cctgggtgcc
     1681 gtcggggttg ttgaactcgt cgaggttgac ggtgcccgaa cccttgtagc cgatgtcgac
     1741 gatgacgtcc ttgccgcgga tctccacgac gacgccgcga accacttcct cctcgcggag
     1801 gccgcgggtc tcaccctgca gggcggccat gaactcctgg ccttctgggg tgtcgtcctc
     1861 gacatatccc gcgtcgagca cggtgatgcg gcccatctgc ttggagccta ggcccttgat
     1921 gattgcttct agcttggaca tgaagtccac ctctttggtt tgcccccacg ctctggtggt
     1981 gggctggaat cccggcacac gaagtccggc agaacgaaca gggtatcgag gaaacccctg
     2041 gtgaaccagg gaaaagaccc tgattcacgc ggcagggctc aggaacggcc cggaacacgc
     2101 cgaattaggg tggatgaccc ccttcccggc cggaacccgg cctgccccct ccccgttcgc
     2161 ggacacgtcc ggaccatgga tcctggacgc agtgcaggcc cgcaccaccg ctctgctgta
     2221 tgagaacgtg gccctggccc agggggtcgc cgtggttctg gcgctcctct tggccgcggc
     2281 ctgcggagga aggcgcccgg tggctgccgc ggcctgggtg tccgccgtgc tggcgctcgc
     2341 cctggtgcgc atgggcatgg cccgggggtt ccggcggcgg gtcgacacca gggaggcggg
     2401 gctcgcctgg cgccgccggg ccatcgccgg agtggcgctg tccggcctgc tgtgggccgg
     2461 gggctccgtt ctgttcatgg tgggcgcgcc cctggcgcag caatccctga cggccctggt
     2521 ggtggcgggg atggtcgctg gcgcggtgcc ggccctcggc gcggtgcccg cggccttcct
     2581 ggccttcgcc gcgcccgccg tgggagcggt tttcctgtgc gccctgctgc aggcccgcga
     2641 catcacgggc tgggccatcg ccctggccag cggcatcttc ctgccggcgg tgctccgcag
     2701 ctcccgccgc ttcgcccggg tgatggcgga ggccatccgg ctgggccggg agcagcagct
     2761 cacgaacgag gcgctcctag ccgcccgcga ccaggccctg gaggcgagcc gggccaagag
     2821 cgaattcctg gccaccatga gccatgagat ccgcacaccc atgaacggcg tgatcgggat
     2881 ggccggcctc ctgctggatt cccacctgga cggcgagcag cgcggctacg ccaccaccat
     2941 ccagcacagc gccgacgcgc tcctggccat catcaacgac atcctggatt tttcccgggt
     3001 ggagtccggc cggctcgacc tcgaatccct gaccttcgac ctgaagggcc tcgtgactga
     3061 agtggccgag ctgctggctt tccaggccgg agtcaaaggg ctggagctgg ctgtggacgt
     3121 ggatcccgcc acgccggcct gggtggtcgg ggaccctgga cggctgcgcc aggtgctcat
     3181 caacctcggc agcaacgcga tcaagttcac gcccgacggg cgtgtggccc tgcgggtgag
     3241 ccgagccggg ggcacggacc ggcgggcaga tctgctcttc gaggtggagg acactggcat
     3301 cggcattccc gccgaccgtc tgcctgactt gttcaacccc ttcaaccagg gggatgcctc
     3361 catggcgcgc cggttcggcg gcaccgggct cggcctcagc atctccaagc ggctgataga
     3421 cctgatgggg ggcgccctga cggcgaccag tcaagaaggc gcgggttccc agttccggat
     3481 ccacctgtcc ctgccggtgg cggatccccc cgctccggcg gtggacacgc cggaggggcc
     3541 ggagcccgcc gcggcgccgg gacacctccg cgtgctggtg gtggaggaca acgccatcaa
     3601 ccagcgggtg gtcacccgg
//
LOCUS       DATGWW010000046         2671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_410823, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000046 DATGWW010000000
VERSION     DATGWW010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2671
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410823"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..1103)
                     /locus_tag="VK150_00600"
     CDS             complement(21..1103)
                     /locus_tag="VK150_00600"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HLP29826.1"
                     /translation="MRFGPLQLHFRSRLRKRVPWIIVVVFAALFTGLQFLIVPAAVHG
                     HPGVVANALIMPFLISFCYGFLTPLPWRWTGDDRLRAPFWRGLVQAVAFNALLILLLV
                     TLSWVMVRNVNFKAEALGLGQGAKASFGTILLVQMLAGVPMMTIIGAIISLGVVTEEE
                     KAAAEAKLEEAQWVLLRGQLSPHVLFNSLNGLAELVRQDPIAAEQALLDLSELYRALL
                     RHGDRPWAPLGEERTLVQRFLAVEGLRFGPRLRVAWDWDAALDATETPPFLLQPLVEN
                     ALKHGIAPHPDGGELTLTLRREGEGFRLRVANTGRGLGLVPGHGVGVANLEARLKLAY
                     GQGATFHLRSEGPATVAEVRVLGGGR"
     gene            1265..1822
                     /locus_tag="VK150_00605"
     CDS             1265..1822
                     /locus_tag="VK150_00605"
                     /inference="COORDINATES: protein motif:HMM:NF012479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HLP29827.1"
                     /translation="MRLTPLLVPSLALLATLAPAADTAAERKVPMSLHEVTLNTLEGK
                     PQSLAAYKGKVVLAVNVASECGYTPQYAGLQKLYASLKDRGLVVLGFPCNQFGGQEPG
                     SAAQIESFCQKNYGVTFPLFEKLEVKGAGKAPVYQFLTAKHGEPAWNFHKYLVGKDGQ
                     VIQAFSSKVAPDSAELMAAIEAALK"
     gene            complement(1823..2509)
                     /locus_tag="VK150_00610"
     CDS             complement(1823..2509)
                     /locus_tag="VK150_00610"
                     /inference="COORDINATES: protein motif:HMM:NF014025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HLP29828.1"
                     /translation="MPHLGPLPTWSFALGVATSLFSVLNPISAAAIFASATSGMEPPA
                     LRRSAKKAALTAGAAMLAFALVGQFIFSLFGFTALAMRFVGGVLVLYRAIAMLYGEDP
                     RERSTEDEKAEASRKLPEDFAIIPFGIPLVAGPGTLSTVMGMIAGIGWLEYGVVLAAI
                     LLNTWIVYLFLRKAPAVFSRLGAIGTKVVNKLMGLILAAVAMQFLINGVKALYVEMQQ
                     APPPAVVSTK"
BASE COUNT          458 a          946 c          914 g          353 t
ORIGIN      
        1 caaggcgacc cggagcggct tcatcgcccg cctccaagca cccgcacctc cgccaccgtc
       61 gcaggtccct ccgagcgcag gtggaaggtg gcgccctggc cataggcgag cttcagccgc
      121 gcctccaggt tggccacccc caccccatgc cccggcacga ggccgaggcc ccggccggta
      181 ttggccaccc ggagccggaa gccctctcct tcccgccgca gggtcagcgt cagctcgccg
      241 ccgtcgggat gcggcgcgat gccgtgcttc aaggcgttct ccaccagggg ctggagcagg
      301 aagggcggcg tttccgtggc atccagagcc gcgtcccagt cccaggccac ccgcagccgg
      361 gggccgaacc ggaggccctc cacggccagg aaccgctgca ccagggtccg ctcctcgccc
      421 aggggtgccc agggccggtc gccatggcgg agcagcgccc ggtacagttc cgacaggtcg
      481 aggagcgcct gttccgcggc gatgggatcc tgccgcacca gttcggccag cccgttcagc
      541 gaattgaaga gcacatgggg gctgagctgc ccgcgcagca ggacccattg cgcctcttcc
      601 agcttggcct cggcagcggc cttctcctcc tcggtgacca cccccagcga gatgatggcg
      661 ccgatgatgg tcatcatcgg aaccccggca agcatctgca ccagcaggat cgtgccgaag
      721 gaggccttcg cgccctgtcc gagccccagg gcctcggcct tgaagttgac gttgcgcacc
      781 atgacccagc tcagggtcac caacaggagg atgagcagcg cattgaaggc cacggcctgg
      841 acgagccccc gccagaaggg ggcgcgcagg cggtcgtccc cggtccatcg ccagggcagg
      901 ggcgtgagga agccgtagca gaaggaaatc aggaagggca tgatcagcgc gttcgccacg
      961 acgccgggat ggccatggac cgcggccggc acgatcagga actgcagccc ggtgaacagg
     1021 gccgcgaaga ccaccacgat gatccagggc acccgctttc gcaggcggga ccggaagtgc
     1081 agctggagcg ggccgaatcg catggtcatc agcatgaccg agcgggggga ggcccgggga
     1141 gaccctagac ggcgggcccg ccggctggac gctcggagcc gctcagcggt tggccgagcc
     1201 cggcggtccg gcctggaacg ccggccgacc cgccggcacc ctagatgagt accccggaga
     1261 tcccatgcgt ctgacccctc tgctcgtccc gtccctcgcc ctcctggcca ccctcgcccc
     1321 cgccgccgac accgccgccg aaaggaaggt ccccatgtct ctgcacgaag tcaccctcaa
     1381 caccctggag ggcaagcccc agtccctggc cgcctacaag ggcaaggtcg tgctggccgt
     1441 gaacgtggcc agcgaatgcg gctacacccc ccagtacgca gggctgcaga agctctacgc
     1501 gtcgctgaag gaccgcggac tcgtggtgct cggcttcccc tgcaaccagt tcggcggcca
     1561 ggagcccggc tccgcggccc agatcgaatc cttctgccag aagaactacg gggtgacctt
     1621 cccgctcttc gagaagctgg aggtcaaggg ggccggcaag gcgccggtct accagttcct
     1681 caccgccaag cacggggagc ccgcctggaa cttccacaag tacctggtcg ggaaggacgg
     1741 ccaggtcatc caggccttca gcagcaaggt cgcgccggac agcgccgagc tgatggccgc
     1801 catcgaggcc gcgctgaagt agctacttcg tggacacgac cgcgggtggc ggggcctgct
     1861 gcatctcgac gtagagcgcc ttcacgccgt tgatgaggaa ctgcatggcc acagccgcca
     1921 ggatgaggcc catgagcttg ttcaccacct tggtgccgat ggcgcccagg cgggagaaca
     1981 cggccggggc cttgcgcagg aagaggtaga cgatccaggt gttcagcagg atggctgcga
     2041 gcaccacccc gtactccagc cagccgatgc ccgcgatcat gcccatgacc gtcgacagcg
     2101 tgcccgggcc cgccaccagg gggatgccga aggggatgat ggcgaaatcc tccgggagct
     2161 tccggctggc ttcggccttc tcgtcctccg tgctgcgctc gcggggatcc tcgccgtaga
     2221 gcatggcgat ggcgcggtac aggaccagca cgccgcccac gaagcgcatg gccagggccg
     2281 tgaagccgaa gaggctgaag atgaactggc ccaccagggc gaaggccagc atggccgccc
     2341 cggcggtgag cgcggccttc ttcgcgctgc ggcgcagggc gggaggctcc atccccgagg
     2401 tggcgctggc gaagatggcc gccgcgctga tggggttgag caccgagaac agcgaggtcg
     2461 ccacaccgag ggcgaaggac caggtgggca gggggccgag gtgaggcatg cgggaagtct
     2521 agcgggtggg gcccgggcat ggcgcccgga gtccggcccg tcccgctacc cttgctccat
     2581 gcgcgatccc gagtccctgc gtgaccagca caagcgccgc ctcgcgtgga tgccgtggct
     2641 ctacttcgcc ctgaaggccc ggcaccgcgc c
//
LOCUS       DATGWW010000047         2050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_229634, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000047 DATGWW010000000
VERSION     DATGWW010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229634"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="VK150_00615"
     CDS             complement(<1..548)
                     /locus_tag="VK150_00615"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLP29829.1"
                     /translation="MLNLETFPVGPLGCNCSLLWDPATGQGVVVDPGGDGAKIRKRVE
                     ALGFKVTALLHTHAHFDHVGATRELQDLWQCPAALHGDDTFLIEALAQQTGMFGMPAI
                     PQPEMSDLQAGDRHLDLATLHTPGHTPGSCCFHGAFAKGQVLLAGDTLFRGGVGRTDL
                     WGGSWEHLEQSIRRELYVLDGAT"
     gene            620..>2050
                     /gene="uvrC"
                     /locus_tag="VK150_00620"
     CDS             620..>2050
                     /gene="uvrC"
                     /locus_tag="VK150_00620"
                     /inference="COORDINATES: protein motif:HMM:TIGR00194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HLP29830.1"
                     /translation="MAAVRTNLEKSPVLKRKLADLPLRPGCYLYRDEGGNLLYVGKAK
                     VLRNRVKSYFQQKRLDAKTRRLVARVWDIELIVCETELEALILENNLIKEHWPPFNIL
                     LKDDKSYPYVKLTWKEAFPKVYVTRKVRKDGSLYFGPFFPASTAYRTAELVYRFFQIR
                     DCDIDIDGKRGRACMKYQLHRCTAPCIAAVGQEAYREQAKEARLFLEGKRDELKARLE
                     AAMWKAAEAAAFEQAAQHRDALQQVDAWFTRQKAASADLDDTDVYGSAVLDGRACVHR
                     LMLREGRMVGRQEYVLEDVETFDGAVLAQVIQRVYSADPVPAKLLVEVEPEDGDLLRD
                     WLSGLRGTKARIHVPQKGEKVDLLTMAQENARLALERKFEPARLNEAVLEGLQAFLGL
                     SHLPRRLECFDISHGQGREVVASCVVFSDGVPDKARYRRFKMTNEQNDDFANMHEAVT
                     RRYKRMRDEGQEFPNLVIIDGGLGQLH"
BASE COUNT          363 a          701 c          688 g          298 t
ORIGIN      
        1 gtggcgccat ccagcacgta gagctcccgg cggatgctct gctccaggtg ctcccagctg
       61 ccgccccaga ggtccgtgcg gcccacgccg ccccggaaga gggtgtcccc cgccagcagc
      121 acctggcctt tggcgaaagc cccgtggaag cagcaggaac ccggcgtgtg ccccggcgtg
      181 tgcagggtgg ccaggtccag gtggcggtcg ccggcctgca ggtccgacat ctcaggctgg
      241 ggaatggcgg gcatgccgaa catgccggtc tgctgggcca gcgcctcgat gagaaaggtg
      301 tcgtcgccat gcagcgccgc cgggcactgc cagagatcct gcaattcccg ggtggcgccc
      361 acgtggtcga agtgggcgtg ggtgtgcagc agggccgtga ccttgaagcc gagcgcttcg
      421 acccgcttgc ggatcttcgc gccgtcgccg ccgggatcca ccaccacgcc ctgccctgtg
      481 gcgggatccc acagcagcga gcagttgcag cccagggggc ccacggggaa ggtctcgagg
      541 ttcagcatgg ttccattgtc tcaaatccgg acgccgaagg acgcgccgat gatcggcggg
      601 ccgccgttag actgattccg tggccgccgt ccgaaccaac ctcgagaagt cccccgtcct
      661 gaagcgcaag ctggcggacc tgcccctgcg ccccggctgc tacctctacc gcgacgaggg
      721 cggcaatctg ctctacgtgg gcaaggccaa ggtgctgcgg aaccgggtga aatcctactt
      781 ccagcagaag cgcctggacg ccaagacccg ccgcctggtg gcgcgcgtct gggacatcga
      841 gctcatcgtc tgtgagacgg aactcgaagc gctcatcctc gagaacaacc tcatcaagga
      901 gcactggccg cccttcaaca tcctgctgaa ggatgacaag agctacccct acgtgaagct
      961 cacctggaag gaggccttcc cgaaggtcta tgtcacgcgg aaagtccgca aggacggcag
     1021 cctgtacttc ggccccttct tccccgccag caccgcctac cgcacggcgg agctggtcta
     1081 ccgcttcttc cagatccgcg actgcgacat cgacatcgat ggcaagcgcg gccgggcctg
     1141 catgaagtac cagctgcacc gctgcaccgc gccctgcatc gcggccgtgg ggcaggaagc
     1201 ttaccgggag caggcgaagg aagcgcggct ctttctcgaa ggcaagcgcg acgaattgaa
     1261 ggcccgcctg gaggccgcca tgtggaaggc cgccgaggcc gccgccttcg agcaggccgc
     1321 ccagcaccgc gacgccctcc agcaggtgga tgcgtggttc acccgccaga aggccgccag
     1381 cgccgacctt gacgacacgg acgtctacgg cagcgcggtg ctggatggcc gggcctgcgt
     1441 gcaccgcctc atgctgcggg agggccgcat ggtgggccgg caggaatacg tgctggaaga
     1501 tgtggagacc ttcgacggcg ccgtgctggc ccaggtgatc cagcgggtct acagcgccga
     1561 ccccgtgccc gcgaagctcc tcgtggaagt ggagccggaa gatggcgacc tgctgcgcga
     1621 ctggctctcg ggcctgcggg gcaccaaggc ccgcatccac gtgccccaga agggcgagaa
     1681 ggtggatctg ctgaccatgg cccaggagaa cgcccgcctg gccctggagc ggaagttcga
     1741 gccggcgcgg ctgaacgaag ccgtgctcga aggcctccag gccttcctgg gcctcagtca
     1801 cctgccccgc cgcctggagt gcttcgacat cagccacggc cagggccgcg aagtcgtggc
     1861 cagctgcgtg gtgttcagcg acggcgtgcc tgacaaggcc cgctaccgcc gcttcaagat
     1921 gaccaacgag cagaacgatg acttcgcgaa catgcacgaa gccgtgacgc ggcgctacaa
     1981 gcgcatgcgg gacgagggcc aggaattccc caacctggtg atcatcgacg gcggcctcgg
     2041 ccagttgcac
//
LOCUS       DATGWW010000048         6184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_4214, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000048 DATGWW010000000
VERSION     DATGWW010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6184
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4214"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VK150_00625"
     CDS             <1..351
                     /locus_tag="VK150_00625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29831.1"
                     /translation="LLLRPSPQFFDHLTVLTGWLRYRYLLIVTLLVALAAFTRSGEPG
                     FMEKLLSKLGAWSYGLYLLHPFTMKLVAPHWSGRLGFSLALGLAILGAWVVNRWIEKP
                     LGKLGHGKKGGDGR"
     gene            complement(434..2722)
                     /locus_tag="VK150_00630"
     CDS             complement(434..2722)
                     /locus_tag="VK150_00630"
                     /inference="COORDINATES: protein motif:HMM:NF025330.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HLP29832.1"
                     /translation="MAVAKASVPPLSGRQVSWSLGTDAMNGSITTSSYGPSITYSPGS
                     VVGTYTLSALLTPPAGPATLDSQTLRTITNTILRDPRQSLPRIGHTSVVLKSGRILLI
                     GGSDENNVALAKTELFDPQTQHFYPASSLREARYGHISIMLTDGRVLAAGGYDGSHFL
                     NTAELYDPATNTWSSAPPMATEHYMGIVAALVNGDVLVAGGQSATAPATTTAEIYHLA
                     TNSWSATGNMIQARIGHAMSTLPSGSVLVVGGEGPGMPDSAKGTEIYDPRTGTWQSAS
                     AMATPRYAGHAASRLPDGKILVTGGFNTNQSSIAGSEVFDPVAKSWHNVPPMANARIW
                     HSSTALMDGKILVAGGYGWEGSEVFDPSSESWTTVGPLSYKRHSHTCDLLPDGRPIVI
                     AGTSVNAGGVGAPMSTYEVFSPDYGIWSNPSSVPTIPRRVFGLTHLPDGRVVMFGGSQ
                     PTTSAPLYDTWIFDPTSGNWTQTGRMRNGRFNHAWGTGADGKIFTVGGYAFDATMLNG
                     PEAEWFDPATSSWSPMSPPRVNRQTGHSVTVLKDGRVLVVGSVGYSAPGAEIYDPTTD
                     TWKDAGTQQDVDFRLYHQAVVLPDGRVLVAGGYNAFYLTTPLKACIYDPVANTWATAG
                     TPGHEHISGIMALLPNGKVLLAGGSNDLSKIKGATESDLYNPATNTWSVSGPLNTPRT
                     FPHFAVLSDGRVFLHGGYDPNKDHFLESTEIYDPGTGQWSPGPSLPLMNRSPQITNLP
                     GGRVLLIGAGPAFYDSILYFHP"
     gene            complement(3285..4724)
                     /locus_tag="VK150_00635"
     CDS             complement(3285..4724)
                     /locus_tag="VK150_00635"
                     /inference="COORDINATES: protein motif:HMM:NF021382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="short-chain fatty acyl-CoA regulator family
                     protein"
                     /protein_id="HLP29833.1"
                     /translation="MPSAAPTKPAARLGAKIRLLRRQEGLSQVQLAEALGISPSYLNL
                     IEGNKRPLTAPLLIRLAQQFHLDLKALAPEEDQRLSDDLMEVFGDPLFDPLGLQAQDV
                     RELVQNNPQLARGVFELYRAYQHAQDSLGTLSAKLSDGQGFDPEATRLPSEEVGDFIQ
                     QAMNHFPELEEAGEALWTSAVLEADHPYPGLVAAFEARGIQVRIHRMTEGPGLLRRYD
                     PDRRTLSLSELLPQRSRTFQLAHQLALLDHDALLDRLTTHPLLRTGASRALARVALAN
                     YFASAVLMPYDRFLKAARAERYDIEILARRFQASFEQVCHRLTTLRRPGAEGVPFHFL
                     RIDIAGNISKSFSASGIRFARFSGACPRWNAHAAFLTPGLIRTQISEMPDGRKYFCIA
                     RTLQKDTGGYRGQHAMQALGLGCEMGHAKELIYADGLRLDQPPVPVGVTCRLCERTDC
                     EQRAFPPLQQAFKVEENLRRTSFYARLDK"
     gene            4877..6151
                     /gene="aceA"
                     /locus_tag="VK150_00640"
     CDS             4877..6151
                     /gene="aceA"
                     /locus_tag="VK150_00640"
                     /EC_number="4.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF011645.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004451 - isocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HLP29834.1"
                     /translation="MTPKFPVPPIEDDFAAHRWEGITRPYGPETVKKLRGSLRIEHTL
                     ARLGARKLWKLLQNDEPTRALGALSGGQAVQMAKAGLKAIYCSGWQVAADANLSGQTY
                     PDQSLYPANSVPALVKRLNGALQRADQVEHGEGGISRDWFLPIVADAEAGFGGPLNAY
                     ELMKGMIEAGAAGVHFEDQLSSEKKCGHLGGKVLIPTGHFIRTLVAARLAADVMDVPS
                     LIIARTDADSARLITSDVDERDKPFLTGERTPEGFHRITGGVQMAIARAKAYAPYADL
                     IWCETSTPDLKEAREFAEGVHAAFPGKLLAYNCSPSFNWKKKLSDDEIAAFQRELNAL
                     GYKFQFITLAGFHSLNHGMFELANAYRTEHMTAYARLQEAEFASEAKGYTATRHQREV
                     GTGYFDEVAQAISGGLASTLALVGSTEAQQFH"
BASE COUNT         1110 a         1859 c         2106 g         1109 t
ORIGIN      
        1 ctgctgctgc ggccttcgcc ccagttcttc gaccacctca cggttctcac gggctggctc
       61 cgctaccgct acctgctgat cgtcaccctc ctggtggccc tggcggcctt cacccggagt
      121 ggcgagccgg gcttcatgga gaagctgctt tcaaagctcg gagcctggag ctacggcctg
      181 tacctgctgc accccttcac catgaagctg gtggcgcctc actggtcggg gcgcctgggc
      241 ttcagcctgg ccctgggcct ggccatcctc ggcgcctggg tggtgaaccg ctggatcgag
      301 aaaccgctgg ggaagctggg acacggcaag aagggcggcg atggccgctg atcaggcgcc
      361 gccgatctgc gtgtagagcc tagtgcggct caggtggaag cctaagcgat agggatctcc
      421 tagtgcttcg cacctatggg tggaaataca gtatcgaatc atagaatgca gggcccgcgc
      481 caatcaggag caccctcccg ccaggaaggt tggtgatttg tggggaccgg ttcatcagag
      541 gcaaagaagg ccctggggac cattgcccgg tgccaggatc atagatctcc gtgctttcaa
      601 ggaaatgatc cttgtttggg tcgtaacctc cgtgtaagaa gactcgccca tcggacagca
      661 cagcgaaatg agggaacgtc cttggagtgt tcaaggggcc ggagacagac caggtgttcg
      721 ttgcggggtt gtaaagatct gattccgtgg cgcctttgat tttgctgagg tcgtttgaac
      781 caccagccag caggactttc ccgttcggga ggagggccat gatcccggag atgtgttcgt
      841 gacccggcgt accggcggtg gcccaagtgt tggccaccgg atcataaatg caggccttta
      901 ggggggtcgt gaggtagaaa gcattgtatc cccctgccac gagcactcga ccatccggga
      961 ggacgacggc ctgatggtag aggcgaaaat ccacatcctg ctgggttccc gcgtccttcc
     1021 aggtgtctgt tgtggggtcg tagatttctg cgcctggggc tgagtagcca accgaaccga
     1081 cgacgagaac ccggccatcc ttcagaacgg tcacggaatg tcccgtctgc cggttgaccc
     1141 tgggtgggct catgggggac caactcgaag tcgccggatc gaaccactct gcctccgggc
     1201 cgttgagcat cgttgcgtcg aaggcatagc cgcccacagt gaagatcttc ccatccgcgc
     1261 ctgtacccca agcatggttg aatcttccgt ttcgcatgcg gcccgtttgc gtccagtttc
     1321 ctgaggtagg gtcgaatatc caggtgtcat ataagggggc gctcgtggtt ggttgcgagc
     1381 ctccgaacat gaccaccctt ccgtcaggaa ggtgcgtgag cccaaagacc cgccgcggga
     1441 tggtcggtac actcgatggg ttggaccaga ttccataatc cggtgagaac acttcgtagg
     1501 tcgacatcgg ggcccccaca ccacctgcgt tgacagaggt cccggcaata acgatgggcc
     1561 ggccatcggg cagcagatca cacgtgtggg agtgtcgctt ataggagagg ggacccaccg
     1621 tcgtccacga ttcggacgag ggatcaaaga cttccgatcc ctcccatccg tacccgcctg
     1681 ccacaaggat cttcccgtcc atgagcgccg tggaggagtg ccatatgcgg gcgttcgcca
     1741 tgggaggcac attgtgccag gacttggcca cgggatcgaa gacttcggac cctgcgatgc
     1801 tgctctggtt ggtgttgaac ccacccgtga ccaggatctt cccgtccggg agccgagacg
     1861 ctgcgtgtcc ggcatagcga ggggtggcca tggcggaggc ggactgccag gtcccagttc
     1921 tggggtcata aatctcggtt cccttggccg agtcaggcat gccaggcccc tccccaccca
     1981 ccacaaggac actaccgctg ggaagcgtgc tcatagcgtg tccgatccga gcctggatca
     2041 tgttcccggt ggccgaccag gaattcgtgg ccagatgata gatctcggca gttgtggtgg
     2101 caggtgcggt tgcagattgg cctcccgcga cgaggacgtc tccgttcacc aaggccgcaa
     2161 cgatccccat gtaatgctcc gtggccatcg gaggagcact agaccaggtg ttcgtggcgg
     2221 gatcatacag ttcggccgtg ttgaggaagt gcgatccgtc ataaccgcct gcagccaata
     2281 ctcgtccatc cgtgagcatg atggaaatat ggccgtacct ggcctcacgc agactggagg
     2341 cgggatagaa gtgttgtgtc tgggggtcga atagctcggt tttggccaga gcgacattat
     2401 tctcatcgga gccgccgatc aagaggatcc ttcctgactt cagcactacg ctggtgtgtc
     2461 cgatcctggg caggctttga cgaggatctc gcaggatggt gttggtgatg gtcctcaggg
     2521 tctggctgtc caaggtggca ggccccgcgg gtggggtgag cagggcagag agggtgtatg
     2581 ttccgacgac agagcctggg gagtaggtga tggaaggacc gtaactgctg gtggtgatgg
     2641 agccgttcat ggcatcggta ccgaggctcc aggagacttg gcgacccgag aggggcggga
     2701 cgctcgcctt ggccacggcc atggggaaca caagctcagg tgcaagaatc tcggtcctga
     2761 tccccagagt ggccggcttg ctgagggctg tacccgctgt gttggtgact ctgactgaat
     2821 atgcatagga gcccgcatcc gaggttttta ctgatggaat aactagggac tggcctgtgg
     2881 cattaggaat gggcgtgccg ttccagagcc actgatagct gaatggactg gtcccagaga
     2941 cttggaccga aaatgtcaca gcctgccctt gcgtggctga ttgtgaggcg ggatccatct
     3001 gaatgctcgg aggggtgacg ctgcttcctg atggacctcc gcctccatta cctgttgaag
     3061 gggccgagcc cccacctcca cacgacagga ttgtgagaag tgatgcggta aaaaccagcc
     3121 gccacaggaa gggcgagaaa gcagtacaag gttgatcttc aggttggaat gacattggtt
     3181 tcccctgtgc cttcgaatca tgtctttgtt attgattcat gatgccaggg gttgggatag
     3241 cccggtagga aacgccgaca tggcggcgcc agggcacgga gtctctactt gtccagccgc
     3301 gcgtagaagc tggtgcggcg gaggttctcc tcgaccttga aggcctgctg cagaggcggg
     3361 aaagcgcgct gctcgcagtc ggtgcgttcg cagaggcggc aggtgacgcc cacggggacg
     3421 ggcggctgat ccaggcgcag gccgtcggcg tagatgagct ccttggcgtg gcccatctcg
     3481 cagccgaggc ccagggcctg catggcgtgc tggccgcggt agccgccggt gtccttctgc
     3541 agggtgcggg cgatgcagaa gtacttgcgg ccgtcgggca tctcgctgat ctgggttcgg
     3601 atgaggccgg gcgtgaggaa ggccgcgtgg gcgttccagc gggggcaggc gccggaaaac
     3661 cgcgcgaaac ggatgcccga ggcggagaag ctcttggaga tgtttccggc gatgtcgatg
     3721 cgcaggaagt ggaagggcac gccctcggcc ccgggacggc gcagcgtggt gaggcggtgg
     3781 cacacctgct cgaagctggc ctggaagcgc cgggccagga tctcgatgtc gtagcgctcc
     3841 gccctggccg ctttcaggaa gcggtcgtag ggcatgagca cggcgctggc gaagtagttg
     3901 gcaagggcca cccgggccag ggcgcgggag gcgcccgtgc gcagcagcgg gtgggtcgtg
     3961 aggcggtcca gcagcgcatc gtggtcgagc agggccagct ggtgggccag ctggaaggtg
     4021 cggctgcgct ggggcagcag ctcggagagg ctgagggtgc gacggtccgg gtcgtagcgg
     4081 cggagcaggc ccgggccctc ggtcatgcgg tggatccgga cctggatgcc ccgggcttcg
     4141 aaggccgcca cgaggccggg gtaggggtgg tccgcctcca ggacggcgct ggtccagagg
     4201 gcttctcccg cctcctccag ctccgggaag tggttcatgg cctgctggat gaagtcgccc
     4261 acctcttcgg aaggcagccg ggtggcctcg ggatcgaaac cctggccgtc gctgagcttg
     4321 gccgacaggg tgccgaggct gtcctgggcg tgctggtagg cgcggtagag ctcgaagacc
     4381 ccccgggcca gctgcgggtt gttctggacc agctcgcgca catcctgcgc ctgaagcccc
     4441 agggggtcga agagcggatc gccgaagact tccatgaggt cgtccgagag gcgctggtct
     4501 tcttcggggg ccagggcctt gaggtccagg tggaactgct gggccaggcg gatgagcagc
     4561 ggcgccgtga gggggcgctt gtttccctcg atgaggttca ggtagctggg gctgatgccc
     4621 agggcctcgg ccagctgcac ctggctgagg ccctcctggc ggcggagcag gcggatcttg
     4681 gcgccgaggc gggcggcggg cttggtgggg gcggcggagg gcatggcgac ctcgttgaca
     4741 acaatttaca aaacgcgaag agcgaattga ccgaaatttt caattcaacc cttatcaaat
     4801 cagctgttca ttgacttgcc aaagaataag tcaatctttg acacaacgcc actccccaac
     4861 tttcccgagg tgattcatga cccccaagtt ccctgtcccc cccatcgaag acgacttcgc
     4921 cgcccaccgc tgggagggca tcacccggcc ctacggcccg gagacggtga agaagctccg
     4981 cgggagcctc cgcatcgagc acaccctcgc ccgcctaggc gcccggaagc tctggaagct
     5041 gctccagaac gacgagccca cccgcgccct gggcgccctc agcggcggcc aggcggtgca
     5101 gatggccaag gccggcctca aggccatcta ctgctcgggc tggcaggtgg cggcggacgc
     5161 caacctctcg gggcagacct acccggacca gagcctgtac ccggccaact ccgtgcccgc
     5221 cctggtgaag cgcctgaacg gcgccctcca gcgggccgac caggtcgagc atggggaggg
     5281 cggcatcagc cgcgactggt tcctgcccat cgtggccgac gccgaggcgg gcttcggcgg
     5341 gcccctgaac gcctacgagc tcatgaaggg catgatcgaa gccggcgccg caggcgtcca
     5401 cttcgaggat cagctctcca gcgagaagaa gtgcggccac ctgggcggca aggtgctcat
     5461 ccccacaggg cacttcatcc gcaccctggt ggcggcccgc ctggcggcgg acgtcatgga
     5521 cgtgccgagc ctcatcatcg cccgcaccga cgccgattcc gcccgcctca tcacctcgga
     5581 tgtggacgag cgggacaagc ccttcctcac gggggagcgc acgcccgagg gcttccaccg
     5641 catcaccggg ggcgtgcaga tggccatcgc ccgggccaag gcctacgcgc cgtacgccga
     5701 cctcatctgg tgcgagacct ccacgccgga tctgaaggag gcccgcgagt tcgccgaggg
     5761 cgtgcacgcg gcgttccccg gcaagctgct ggcctacaac tgctcgccct ccttcaactg
     5821 gaagaagaag ctttccgacg acgagatcgc ggcgttccag cgggagctga acgccctggg
     5881 ctacaagttc cagttcatca ccctggcggg cttccacagc ctgaaccacg gcatgttcga
     5941 actggccaac gcctaccgca ccgagcacat gaccgcctac gcccggctgc aggaggcgga
     6001 gttcgcctcc gaggccaagg gctacaccgc caccaggcac cagcgggagg tgggcaccgg
     6061 ttacttcgac gaggtggccc aggccatcag cggcgggttg gcgtccacgc tggccctggt
     6121 gggatccacg gaggcccagc agttccacta ggcggtacgc gaccgggccg aagcgggatc
     6181 cgct
//
LOCUS       DATGWW010000049         2009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_182909, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000049 DATGWW010000000
VERSION     DATGWW010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182909"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(219..1832)
                     /locus_tag="VK150_00645"
     CDS             complement(219..1832)
                     /locus_tag="VK150_00645"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLP29835.1"
                     /translation="MNTDTFAEWVRRQGHRVVRTKSSYWYNAAPGVLQAFPYDWVITP
                     SESEIQDLMLRQGIIAVRYSTPLSYPRGLASYHVILREPYSLDLLKAQARNGVKAGLE
                     HFKIERISFERLAAEGWALQQDTLARQDRLRSMNQEGWERLCHAASDLQGFEAWAAIS
                     NGELAAALIVARLHALYCVPFAMSHRRFLGDHVNNALFYAVSRELLQRPGVERIFFTV
                     QSLDAPANVDEFKFRMGLEPVLVRQVVDFNPLLNPLAVPTVHTWARKLLARDPSSPFL
                     AKAEGMLRFHLEGLKPIEEQAWHERLLPERERLAPRPAVLGKGKGFQVTTATAFDVNA
                     LVDLHGACFSKEEHIPVQLGRPFLRAVYRWFVTAPETSVLVARKGDQLLGFTTLSDRP
                     YNLPMLRACRRELLRGCLRHPSAIFNTELFLRLARLFLLGRVDRANERVAQIAFTGVH
                     PSCQGQGIGKALKQASIQLCRERDMVAVATGVRRQNLRARQLNEQAGFVEVPTKSTRR
                     LIYMRLDLQEVAATEEAAPLRPRREALPT"
BASE COUNT          318 a          639 c          727 g          325 t
ORIGIN      
        1 cctgccagcc gtcgtcccgg aggccctcag cgagggtctt catgaggtgc gtcgaggccg
       61 acagggtggg ccagtagtac ggggtgatga tcatgatgtg gccgcggccg gcggcggggc
      121 gtcgcccaga gcgcgggtcg ggatgagagt cggggttcat gcgcttcctc ggtggggggg
      181 cctggggatc gcgtacatgg agctcgttcg gcgcggcatc aagtcggcaa ggcttcgcgc
      241 ctgggcctga gcggggccgc ttcctctgtc gcggcgacct cctgcaggtc aagccgcatg
      301 tagatcaagc gtcgcgtgct cttggtgggg acctccacga aacccgcctg ctcgttcaac
      361 tgccgggccc gcaggttctg acggcggacg ccggtggcga cagccaccat gtcccgctcg
      421 cggcagagct ggatggaggc ctgcttcagg gccttgccga tgccctgccc ttggcaggat
      481 gggtgcactc cagtgaaggc gatctgggcc acccgctcgt ttgcccggtc cacccggccc
      541 aggaggaaca gccgcgccag ccggaggaac aattccgtgt tgaagatggc cgaggggtgg
      601 cgcaggcaac ctcgcaacag ctcgcgccgg caggcccgca gcatggggag gttgtacggg
      661 cggtcggaga gggtcgtgaa acccagcagc tggtcaccct tccgcgccac gaggaccgac
      721 gtctcaggtg cggtcacgaa ccagcggtac acggccctta ggaaaggcct acccagctgg
      781 acggggatgt gctcctcctt ggagaagcag gcgccgtgga gatctaccag ggcattgacg
      841 tcgaaggcgg tggccgtggt cacctgaaac cccttcccct tcccgaggac ggccggccga
      901 ggtgcgagac gctcccgctc tggcagcagc cgctcgtgcc acgcctgctc ctcgatgggc
      961 ttgaggcctt ccaggtggaa ccggagcatg ccctccgcct tcgccagaaa gggactggac
     1021 gggtcccgtg cgagcagctt gcgggcccag gtgtggaccg tcggaacggc cagggggttg
     1081 aggagcgggt tgaagtccac gacctggcgc accaggacgg gttccagccc catgcggaac
     1141 ttgaattcgt ccacgttggc tggcgcgtcc agggattgca cggtgaagaa gatgcgctcc
     1201 accccaggtc gctgcagcag ctcgcggctg acggcataga agagggcgtt gttcacgtgg
     1261 tcgcccagga accgccggtg actcatcgcg aaaggcacgc agtagagcgc gtgcagccgg
     1321 gccacgatga gcgccgcggc cagctcgcca ttggagatgg cagcccaggc ttcgaagccc
     1381 tgcaggtcgc tggcggcgtg gcagaggcgc tcccagcctt cctggttcat gctgcggagc
     1441 cggtcctggc gagccagggt gtcctgctgc agggcccagc cctccgccgc gaggcgctcg
     1501 aaggagatcc gctcgatctt gaagtgctcc agccccgcct tcacgccgtt gcgggcctgg
     1561 gccttgagca ggtcgagaga gtatggctcg cgcaggatca cgtggtagct ggccagcccg
     1621 cggggatagg acagcggcgt cgaataccgg accgcgatga tgccctggcg gagcatcagg
     1681 tcctggatct ccgattcgga tggggtgatg acccagtcgt agggaaatgc ctggagcacg
     1741 cctggagcgg cgttgtacca gtagctgctc ttggtccgga cgacccggtg gccctggcgg
     1801 cgcacccact ctgcgaaggt gtcggtgttc atcggccctc gacaagggaa tggcccctgg
     1861 agcctgggcc ctggcggcgc atgggtccgc gccggcccat gccggccttg cggctgctcc
     1921 gttccacagg gccgctgcga cggatctgga aacccatccg caggatcatc ggcggacagg
     1981 ttccaggttg ctggacggga cgcaccctc
//
LOCUS       DATGWW010000050         1560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_229821, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000050 DATGWW010000000
VERSION     DATGWW010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229821"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..562)
                     /locus_tag="VK150_00650"
     CDS             complement(<1..562)
                     /locus_tag="VK150_00650"
                     /inference="COORDINATES: protein motif:HMM:NF012509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29836.1"
                     /translation="MTRETWRVPVRVDFAGGTLDLWPIYAMMGGCLTVNAAVDLWIEI
                     GLEREGPGHRITSRDLGVDLAYETWPREAPEALSWVWRVLDATGAPPAAVSLHSPVPR
                     GSGLGVSSCLGVGLFGATLGEEAGEDLASKIAILRDLESRELQTPTGWQDYFPAALGG
                     ALALHWDGPAPRWERLEPHPGLLADLV"
     gene            complement(564..1286)
                     /locus_tag="VK150_00655"
     CDS             complement(564..1286)
                     /locus_tag="VK150_00655"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP29837.1"
                     /translation="MAVHRTLLPATVATAALLLVGCGSEDQLRRVEQEVGDLKLEVFK
                     LRQTVEEGNKRAQADQQAAAEARNQDRRFQADLQESLRQVQDTTRVLNNRLNSQPRNT
                     PKPAADAPAAAVSAEDERAFNAAVLDYNRGNYPLAAEGLELFLKTYPQSQKRPDALFF
                     LGLCHYNQRTFDKAQQAFDRIIRDHAASPQFLPAKLKRAQCLLKQGLKPAAVKAFREL
                     VDGFAGSAEARTAQQELSDLGL"
     gene            complement(1369..>1560)
                     /locus_tag="VK150_00660"
     CDS             complement(1369..>1560)
                     /locus_tag="VK150_00660"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HLP29838.1"
                     /translation="RGTNEYNLALGNKRAAAALAYLKTLGVDEARFTTISYGKEKPLC
                     TEAKEACWSQNRRGEFKLK"
BASE COUNT          212 a          513 c          577 g          258 t
ORIGIN      
        1 ccaccaggtc cgccagcagg ccggggtgcg gctcgagacg ctcccagcgc ggggccggcc
       61 cgtcccagtg gagggccagg gcgcccccca gggccgccgg gaagtagtcc tgccagccgg
      121 tcggcgtttg aagctcccga ctttccaagt cacgcagaat cgcgattttg gaagcgagat
      181 cttcaccggc ctcctcgccg agggtggcac cgaacaggcc cacgccgagg caggaggata
      241 cgcccaggcc cgagccccgg ggcacggggc tgtggaggga cacggcggct ggcggtgcgc
      301 cggtggcgtc cagcacccgc cagacccagg agagcgcttc cggcgcttcc cggggccagg
      361 tctcgtaggc caggtccaca ccgaggtccc ggctggtgat ccggtggccg ggaccctccc
      421 gctccagccc gatctcaatc cacaggtcca cggcggcgtt caccgtgagg cagccgccca
      481 tcatcgcgta gatgggccag aggtccagcg tccccccggc gaagtccacg cggacgggta
      541 cgcgccaggt ttcccgcgtc atctcagagg ccgaggtcgc tcagttcctg ctgggccgtg
      601 cgggcctccg cgctgcccgc gaagccgtcc accagctcgc ggaaagcctt cacggccgct
      661 ggcttcaggc cctgcttgag caggcactgg gcccgcttga gcttggccgg caggaactgg
      721 ggcgaggccg cgtggtcccg gatgatccgg tcgaaggcct gctgggcctt gtcgaaggtc
      781 cgctggttgt agtggcagag gcccaggaag aagagggcat cggggcgctt ctggctctgc
      841 ggataggtct tgaggaagag ctcgagcccc tccgccgcca gcgggtagtt gccgcggttg
      901 tagtcgagga cggccgcgtt gaaggcgcgc tcgtcttcgg cggagaccgc ggcggcgggg
      961 gcgtcggccg ccggtttggg cgtgttgcgg ggttggctgt tgaggcggtt gttcagcacg
     1021 cgggtggtgt cctgcacctg gcgaaggctc tcctggaggt ccgcctggaa gcgccggtcc
     1081 tggttccggg cctcggccgc agcctgctgg tcggcctggg cgcgcttgtt gccctcctcc
     1141 accgtctggc ggagcttgaa gacctccagc ttcaggtcgc ccacctcctg ctccacgcgg
     1201 cggagctggt cttccgatcc gcaaccgacg agaagcaacg cggccgtggc gaccgtggcg
     1261 ggaagcagcg tgcggtggac ggccatggga actccggggt tggctccagt ctaaatgaaa
     1321 aagcgggagc cgaggctccc gcttccggtc cttgcggacg aacgctgact acttgagctt
     1381 gaactcgccg cggcggttct ggctccagca ggcctccttg gcctcggtgc agaggggctt
     1441 ttccttgccg tagctgatgg tggtgaagcg ggcctcgtcc acgccgaggg tcttcagata
     1501 ggcgagggcg gcggcggcgc gcttgttgcc gagtgcgagg ttgtactcgt tggtgccgcg
//
LOCUS       DATGWW010000051         1572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_229934, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000051 DATGWW010000000
VERSION     DATGWW010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229934"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="VK150_00665"
     CDS             complement(<1..310)
                     /locus_tag="VK150_00665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29839.1"
                     /translation="MIFVSALLLTALFATALYLQFASQRSLQHNRNTDQDQRQFRAEL
                     DAFDVALYEQEEGLYEYAVLMDDSQLERIRTAQSGTHAALGRLRELARDHQDQRIRSL
                     V"
     gene            423..1067
                     /locus_tag="VK150_00670"
     CDS             423..1067
                     /locus_tag="VK150_00670"
                     /inference="COORDINATES: protein motif:HMM:TIGR00093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HLP29840.1"
                     /translation="MPRLILLNKPYGVLTQFTDAQGRPTLKQFVDLPGVRPAGRLDQD
                     SEGLVILTDAGWLQARISEPRHKLPKTYWVQVEGLPTDEALARLAAGVELNDGPTLPA
                     RARRMPEPALWPRDPPIRYRAAIPTAWIELTISEGRNRQVRRMTAAVGFPTLRLVRAA
                     VGPWSVAGLAPGQWREIPESEWLPLFPPAKRPSTRAKPHERTSLETPRHRRGRR"
     gene            1018..1467
                     /locus_tag="VK150_00675"
     CDS             1018..1467
                     /locus_tag="VK150_00675"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HLP29841.1"
                     /translation="MSERPWKPHVTVAAVVEREGRFLMVEERINGEIVYNQPAGHLEE
                     NESLVDATVREVLEETACRFTPETLVGFYRWRNPHSGVTFIRVALAGHCSEPEPGRSL
                     DEGIVAARWFTRSEIGTLRLRSPMVLRCIDDYLAGARHPLTLLVDVS"
BASE COUNT          257 a          535 c          529 g          251 t
ORIGIN      
        1 ccaccaggct gcggatgcgc tggtcctggt ggtcacgggc cagttcccgc aaccggccca
       61 gggcggcgtg ggtcccggac tgcgccgtgc ggatacgttc cagttgcgag tcgtccatga
      121 gcacggcgta ctcgtagagc ccctcctcct gttcgtagag ggccacgtcg aaggcatcca
      181 gttcggcgcg gaactggcgc tggtcctggt cggtgttgcg gttgtgctgg agggagcgct
      241 gggaggcgaa ctggaggtag agggcagtgg caaagagcgc cgtcagcaac agcgctgaaa
      301 cgaagatcaa tcgaccgcga aggcttccgt gcccgggata caccggatgg ggggtcctgc
      361 cgatgaaatg tataatcggt cgactttata atccttccca ccaaaattcg ccacaattcc
      421 ccgtgccccg cctcatcctg ctcaacaagc cctacggggt cctcacccag ttcaccgatg
      481 cacaggggcg ccccaccctg aagcagttcg tggacctgcc cggggtacgg ccggcggggc
      541 gcctggacca ggatagcgag gggctcgtca tcctcaccga cgcgggctgg ctccaggccc
      601 ggattagtga accccgtcac aaattgccca agacctattg ggtccaggtg gaaggcctcc
      661 ccacggacga ggcgctggcg cgcctggcgg cgggggtgga gttgaacgac ggccccaccc
      721 tgccggcccg ggcacggcgc atgccggaac cggcgttgtg gccccgggac ccgcccatcc
      781 gttatcgtgc ggccatcccg accgcctgga tcgaactgac catcagcgag gggcgcaacc
      841 gccaggtccg gcgcatgacc gcggcggtgg gctttcccac cctgcgtctg gtccgggccg
      901 ccgtcggccc ctggtcggtg gcggggctgg cgcccgggca gtggcgcgag atcccggaat
      961 cggagtggct acccctgttt cctcccgcaa aacgtccatc cacgagagcc aagccccatg
     1021 agcgaacgtc cctggaaacc ccacgtcacc gtcgcggccg tcgttgagcg ggagggccgc
     1081 tttctgatgg tggaggagcg gatcaacggc gagatcgtct acaaccagcc ggccggccac
     1141 ctggaggaga acgagtcgct ggtggacgcc acggtgcgcg aggtgctgga ggagaccgcc
     1201 tgccgcttca cgcccgagac gctggtgggc ttctatcgct ggcgcaatcc gcacagcggc
     1261 gtgaccttca tccgcgtcgc cctcgccggc cactgctcgg aaccggaacc gggccgctcc
     1321 ctcgacgaag ggatcgtcgc ggcgcgctgg ttcacccgct ccgagatcgg cacgctccgc
     1381 ctgcgcagcc ccatggtgct gcgctgcatc gacgactatc tcgcgggcgc gcgccacccc
     1441 ctcacgctgt tggtggatgt gtcctgaatt ggccattagc atgctttcag aacgctccca
     1501 aggtgttgcc gcaaggcgcg gtgcgcaggc aatggccgta gcccttggca agcaccgcaa
     1561 cgcagcggcg gc
//
LOCUS       DATGWW010000052         1727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_229976, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000052 DATGWW010000000
VERSION     DATGWW010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229976"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /locus_tag="VK150_00680"
     CDS             <1..490
                     /locus_tag="VK150_00680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29842.1"
                     /translation="TNPFNYEASAANPDGFKEVTYPAILNNCEACHVPGSYDFSATAN
                     KNALPNLLWSTTAKADMTIPAGYTGDIIGLSKWMESYVLPKGTPANFTGRANNLVISP
                     ISASCFGCHDSSAAVAHMRQNGGVIYSAFGTNATTGANPETCMTCHGTGKTADIKTVH
                     QY"
     gene            695..1102
                     /locus_tag="VK150_00685"
     CDS             695..1102
                     /locus_tag="VK150_00685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29843.1"
                     /translation="MGFRCSTPLLALAVLFAGATAVMAETAPKGATQTESVKPAGRAA
                     RAGKKRTPANIKLVDINGASKAELLTLPSIDAALADRIIAGRPYGSKSHLLTRNILPG
                     VNYDAVKGRVVARQPFADAAKNADAIAKAKKKN"
     gene            1224..>1727
                     /locus_tag="VK150_00690"
     CDS             1224..>1727
                     /locus_tag="VK150_00690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29844.1"
                     /translation="MRKPFSITVTSVSFVLLHVACLAAIWLAFSWKLVALCAAMYLIR
                     MFAVTAGYHRYFSHRSYRMGRLPQFAMAFVAQTSAQKGVLWWAAHHRHHHRHSDTPMD
                     LHSPVTDGFWWSHVGWILSDAHDHYDPKAIEDFARFPELRFLDTYHWICPWLLGTATF
                     AFGIWTGI"
BASE COUNT          305 a          639 c          516 g          267 t
ORIGIN      
        1 caccaacccc ttcaactacg aagcctctgc cgccaatccg gacggcttca aggaagtcac
       61 ctaccccgcg atcctgaaca actgcgaggc ttgccacgtt cccggcagct acgacttcag
      121 cgccacggcc aacaagaacg cgctgcccaa cctgctctgg tccacgaccg ccaaggcgga
      181 catgaccatc cccgccggct acacgggcga catcatcggc ctctcgaagt ggatggaatc
      241 ctacgtcctc cccaagggca ccccggccaa cttcaccggc cgcgccaaca acctggtgat
      301 ctcaccgatc agcgcctcct gcttcggctg ccacgacagc tcggccgccg tggcccacat
      361 gaggcagaac ggcggcgtca tctacagcgc cttcgggacc aacgccacca ccggcgccaa
      421 ccccgagacc tgcatgacct gccacggcac cggcaagacc gcggacatta agaccgtcca
      481 ccagtactag tcccgcaacc gccctttcga cggggcctgg atccctatcc ggaatccccg
      541 atcgaaaccc cgcgaatggc ctggaagccc agcttccagg ccattctgcg ctatgatcgt
      601 aggtggctcg accaggcgcc cgcgaggctc cggctcgaga aggcagttcc gtggttgacc
      661 ggcctcgatg cgcgggctgg atgaggagtc tcagatgggc tttcgctgca gtacccccct
      721 cctggccttg gccgtgctgt tcgccggcgc caccgccgtc atggccgaga cggcgcccaa
      781 gggggccact cagactgaat ccgtgaagcc ggccggcagg gccgccaggg ccggcaagaa
      841 gaggaccccc gcgaacatca agctggtcga catcaacggc gcatccaagg cggagctgct
      901 gacgctcccg agcatcgacg ccgccctcgc cgacaggatc atcgcggggc ggccctacgg
      961 cagcaagtcg cacctgctga cccgaaacat ccttcccggg gtgaactacg acgcggtgaa
     1021 ggggcgggtg gtcgcgaggc agcccttcgc cgacgcggcc aagaacgccg acgccatcgc
     1081 gaaggcaaag aagaagaact gagggcgggg ttctcccgcg cgagaaccca agcgacaggc
     1141 ctgtgacggg acggcgacat ctccgcggcg atgtcggggg ccttcccgtc tcggctaccc
     1201 tggagcctcg ccccgggtgg tccatgcgca agcccttctc gatcaccgtg acctccgtgt
     1261 cgttcgtgct gctccatgtc gcctgcctgg cggccatctg gctggccttc tcctggaagc
     1321 tggtggcgct ctgcgcggcg atgtacctga tccggatgtt cgccgtcacg gcggggtacc
     1381 accgctactt cagccaccgc agctaccgga tgggccggct gccccagttc gccatggcct
     1441 tcgtggcgca gacctccgcc cagaagggcg tgctgtggtg ggccgcccac caccggcacc
     1501 accaccggca ttcggatacg cccatggacc tgcactcccc cgtgacggac gggttctggt
     1561 ggtcgcacgt gggctggatc ctgtcggacg cccacgacca ctacgacccc aaggccatcg
     1621 aggatttcgc ccgcttcccc gagctgcgct tcctcgacac ctaccactgg atctgtccct
     1681 ggctgctggg tacggcgacc ttcgccttcg ggatctggac gggaatc
//
LOCUS       DATGWW010000053         1943 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_230111, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000053 DATGWW010000000
VERSION     DATGWW010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230111"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            306..1178
                     /locus_tag="VK150_00695"
     CDS             306..1178
                     /locus_tag="VK150_00695"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HLP29845.1"
                     /translation="MTRSVDTTRGAALVALAALLWSSSGLFIKVLPLGALQIACARSL
                     VAALTIAAVVAFRGGRPFPRPDRLSLACAASYAGVLIFFVAATKLTTAANAIFLQFSA
                     PIYLVFLEPWVTGRALQRRDLLAVGLCLGAMGLFFVGRLGAGTLLGNGLGMVSGLCLA
                     LFSLTLKLQRHRHPGADPIGAIILGNLLVAILCAPLALRGFHPTLPQAGILVYLGVFQ
                     IGIAYLLFNAGMRHLSATAAVVTGTLEAVLNPVWVFLGIGERPSPWALAGGLLILATI
                     GWYNLVPRAPRSRL"
     gene            1270..>1943
                     /locus_tag="VK150_00700"
     CDS             1270..>1943
                     /locus_tag="VK150_00700"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLP29846.1"
                     /translation="MRGLSEAFPLDEASLLAALEPPVTEDPARIRDILAKARAMDGLD
                     DQDLPPLMALQDPDLLAELFESAQWVKDQIYGNRIVMFAPLYVSNLCANECLYCAFRA
                     SNRDLPRRALTQPEIAAEVEHLLAQGHKRLVLVAGEAYPKEGLDYILSAIRTVYSTRR
                     GNDNIRRVNVNIAPLTVDDFRRLLDAQIGTYQLFQETYHRETYQRMHLRGLKADFDWR
                     LGCMDRA"
BASE COUNT          270 a          739 c          590 g          344 t
ORIGIN      
        1 tcaccagctg aatccgggtc gtgctgcttc gataaagatt caccaccgag acacggagcc
       61 cacggaggtg gcacggaaag gccgtgttcc tccgtgccac ctcgcatcct gcttcgcggg
      121 gcgcgggcgg gatccgcgcg atcgcgaggc catccgcccg cgccggctgg ccttgcgaag
      181 cttgtccaac cgaacctctc agcgtcctcc gtgtctccgt ggtgaatctt tgaccttgaa
      241 acgctgggcc agacgaatca acagcggacg acctggtcgc cagtccgcca tgctccaatg
      301 gctgcatgac ccgatccgtc gatacgaccc ggggcgcggc cctggtggcc ctcgccgccc
      361 tgctctggag ctccagcggc ctcttcatca aggtgctgcc cctcggcgcc ctccagatcg
      421 cctgcgcccg cagcctggtg gccgccctca ccatcgcggc cgtggtggcc ttccggggcg
      481 gacgcccctt cccgcgtccg gaccgactgt ccctggcctg cgccgccagc tatgccggcg
      541 tgctgatctt cttcgtggcg gccaccaagc tgacgacggc ggcgaacgcg atcttcctcc
      601 agttttccgc gcccatctac ctggtgttcc ttgagccctg ggtgaccggt cgggccctcc
      661 agcgccggga cctcctggcc gtggggctct gcctgggggc catgggcctc ttcttcgtgg
      721 gccgcctcgg cgcaggcacc ctcctcggca atggcctcgg catggtgtcc ggcctctgcc
      781 tcgccctgtt ctcgctgacg ctcaaactgc agcggcaccg ccaccccggg gccgatccca
      841 tcggcgccat cattcttggc aacctcctgg tggccatcct ctgcgccccg ctggccctcc
      901 ggggcttcca ccccaccctg ccccaggcgg gcatcctggt ctacctgggc gtcttccaga
      961 tcggcatcgc ctacctcctg ttcaacgcgg gcatgcgcca cctgtccgcc acggccgcgg
     1021 tggtgaccgg caccctggaa gcggtgctca accccgtctg ggtgttcctg ggcatcgggg
     1081 agcggccctc cccctgggcg ctcgcgggcg gactgctcat cctggccacc atcggctggt
     1141 acaacctcgt tcccagggcc cctcgcagcc ggttgtgacc aaggtccggc ctccggggct
     1201 ggtgcctagt tgacccaagg gttatgtttt gcctgcgacg cccatctgcg cgccgcggag
     1261 gttctttcca tgcgcggcct gtctgaagcc ttccccctgg atgaggcatc ccttctcgcg
     1321 gccctggaac ctccggtcac ggaagacccg gcccgcatcc gggacatcct ggccaaggcc
     1381 cgcgccatgg acggcctgga cgaccaggac ctgccgccgc tcatggccct ccaggatccc
     1441 gatctgctgg ccgagctctt cgagagcgcc cagtgggtga aagaccagat ctacggcaac
     1501 cgcatcgtga tgttcgcgcc gctctatgtg tcgaacctgt gcgcgaacga gtgcctctac
     1561 tgcgccttcc gggcctcgaa ccgggacctt ccccgccggg cgctgacaca gccggaaatc
     1621 gccgccgaag tggagcacct cctggcccag ggccacaagc gcctggtgct ggtggccggc
     1681 gaagcttatc ccaaggaggg cctcgactac atcctgtcgg ccatccgcac cgtctacagc
     1741 acgcgccgcg gcaacgacaa catccggcgg gtgaacgtga acatcgcgcc gctcacggtg
     1801 gacgacttcc gccgcctgct cgacgcgcag atcggaacct accagctgtt ccaggagacc
     1861 tatcaccgcg agacctacca gcggatgcac ctccgcggcc tcaaggcgga tttcgactgg
     1921 cgcctcggct gcatggaccg ggc
//
LOCUS       DATGWW010000054         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_183080, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000054 DATGWW010000000
VERSION     DATGWW010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183080"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..539)
                     /locus_tag="VK150_00705"
     CDS             complement(<1..539)
                     /locus_tag="VK150_00705"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLP29847.1"
                     /translation="MISFSNVSKQYGKQILFIEADFQLNPGEKVGLVGPNGAGKSTLF
                     RMIMGEESPDDGSVTLPKKLTLGYFRQEVDEMTGRPVLDEAIAGSGRLGDLHHELLDL
                     EHAMSDPERGDELEAILERFGHVQEEYQHLGGYELEAKARACLHGLGFEDAQIDGDVG
                     ALSGGWKMRVSMAKVLLGN"
     gene            complement(539..>2029)
                     /locus_tag="VK150_00710"
     CDS             complement(539..>2029)
                     /locus_tag="VK150_00710"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HLP29848.1"
                     /translation="EQLIARLTKQLATAPASQQDTLEDQLEVAKAQLQLDRDELDAAS
                     EDLIRVGGDPQARIRRLKEAHEAADRESSQAMVAARPASAFQAGSLVARILEWTSQRS
                     KLQRLDRARQEALAKVQVLTKRRETIEARAKKEKEDREAAKFWASSLVKESAAGRGPG
                     RDQAQDAVSYLRLYGDVQRRLSDMGRRIQDQQELSVVYGNWQALADSHRNTALHGLLA
                     RLLTILGLVLLAYLAGLLIDLLFHKAAAGDRKGAGTLRTVIKLAVQVLCVLIIGFLIF
                     GIPGQITTVLGLAGAGLTVAMKDFIVAFFGWFILMGRNGIRVGDWVEIRGVGGEVVEI
                     GLLRTVVMETGSWSDAGHPTGRRVAFVNNFAIEGHFFNFSTSGKWMWDELRILIPPGQ
                     DPYPVIDGVQKLVEQQTEANARLAEQEWQRATARYRVKAFSTAPGLNVVPSLNGIEVR
                     ARYITRAFERHETRLRLNQAVVELMHGPRSEATFGEATTPSVKAED"
BASE COUNT          313 a          693 c          668 g          355 t
ORIGIN      
        1 aagttgccga gcagcacctt ggccatggac acgcgcatct tccagccgcc agagagcgcg
       61 cccacgtcac cgtcgatctg cgcgtcctcg aacccgaggc cgtgcaggca ggcccgggcc
      121 ttggcttcca gctcgtagcc gcccaggtgc tggtattcct cctgcacgtg gccgaagcgc
      181 tcgaggatgg cctccagctc gtcgccccgc tcggggtcgg acatggcgtg ctcaagatct
      241 agtagctcgt ggtgcaggtc gcccaggcgg ccgctgccgg cgatggcctc gtccagcacg
      301 ggccggcccg tcatttcgtc tacctcctgg cggaagtagc caagggtcag ctttttaggt
      361 agggtgaccg aaccgtcatc gggcgattcc tcacccatga tcatgcggaa gagcgtggat
      421 ttccccgccc cgttgggacc caccaggccc accttctcgc cggggttcag ctggaaatcc
      481 gcttcgatga acaggatctg cttgccgtac tgcttgctca cattggaaaa cgaaatcatc
      541 aatcctcggc tttcacactg ggggtcgtgg cttccccgaa ggtagcttcg ctccgggggc
      601 cgtgcatgag ctcaaccacg gcctggttca gtcgcaggcg ggtctcatgg cgttcgaagg
      661 ctcgggtgat gtagcgggcc cggacttcga tgccattcaa cgagggtacg acgttcagcc
      721 ccggcgcggt ggagaaagcc ttcacgcggt agcgggccgt ggcgcgctgc cattcctgct
      781 cggccaggcg ggcattggct tcggtctgct gttccaccag cttctgcacc ccgtcgatga
      841 cgggataggg gtcctggccc ggggggatca ggatcctcag ctcgtcccac atccacttgc
      901 ccgaggtgga gaagttgaag aagtggccct cgatggcgaa gttgttcacg aaggccacgc
      961 gccggccggt ggggtgcccc gcgtcgctcc agctgccagt ctccatgacc actgtgcgga
     1021 gcagaccgat ttccaccacc tcgccgccca cgccgcggat ctccacccag tcccccacgc
     1081 ggatgccatt gcggcccatg aggatgaacc agccgaaaaa cgccacgata aaatccttca
     1141 tggccaccgt gaggccggcg cccgccaggc ccagcacggt cgtgatctgg cccggaattc
     1201 cgaagatgag gaagccgatg atgagcacgc agagcacctg gacggcgagc ttgatgacgg
     1261 tcctcagcgt tcccgcgccc ttccggtccc cggcggcggc cttgtggaag aggaggtcga
     1321 tgagcaggcc ggccaggtag gccagcagga ccagccccag gatcgtcagc aggcgggcca
     1381 gcagcccgtg cagggccgtg ttgcggtgac tgtccgccag ggcctgccag ttgccgtaga
     1441 ccacggacag ttcctgctga tcctggatgc gccggcccat gtcggacagg cggcgctgca
     1501 catcgccgta caggcgcaga tatgaaacgg cgtcttgggc ctggtcccgc ccgggccccc
     1561 gccccgcggc ggactccttc accaggctgg aggcccagaa cttcgcggcc tcccggtcct
     1621 ccttctcctt cttggcccgg gcctcgatgg tctcgcggcg cttggtgagc acctgcacct
     1681 tcgcaagcgc ctcctggcgg gcccggtcga ggcgctgcag cttgctgcgc tgagaggtcc
     1741 attccaggat ccgggccacc aggctgccgg cctggaaggc gctggcaggc cgggcggcca
     1801 ccatggcctg ggaggactcc cggtcggcgg cctcgtgggc ctccttgagc cgccggatcc
     1861 gggcctgggg atccccgccc acgcggatca gatcctcgga ggccgcatca agctcatccc
     1921 tgtccagttg cagctgggcc ttggcgacct cgagctgatc ctccagggtg tcctgctgcg
     1981 aggccggggc cgtggccagc tgcttggtga ggcgggcgat gagctgctc
//
LOCUS       DATGWW010000055         4740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_230280, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000055 DATGWW010000000
VERSION     DATGWW010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4740
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230280"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..1197
                     /locus_tag="VK150_00715"
     CDS             178..1197
                     /locus_tag="VK150_00715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29849.1"
                     /translation="MASRPDQVASTTNGTLTRLKGGSLSGTYLLEAGAYRCVRKTISL
                     EETREYGFIRWQSQLKRLQRFGQLFPGVFPQVLDVGREGPIAYFDLEYIEHAMSGSDF
                     LAGNPPEPEVQAYAQALFETMDKLHAMKRPSCRGALDLYLYEEMERPLRICCEDSTFR
                     AFLDHPTLVFNGVEIPSIATVLPDLYRLGEASWKDPWECYTHGNLTLENTLWVPATRK
                     IWFIDPYEENVTDSVHNEYSQILQSSHARYEICNALPPTVEGNRVTLDIPDVPGIRRF
                     NDLFMVLLGARLSEEEHRLVRLYEISQFTRMLPFKLHTSRERMIFFYALASFLAHQLL
                     EDVHG"
     gene            1190..2323
                     /locus_tag="VK150_00720"
     CDS             1190..2323
                     /locus_tag="VK150_00720"
                     /EC_number="4.2.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sedoheptulose 7-phosphate cyclase"
                     /protein_id="HLP29850.1"
                     /translation="MADRKRWTLTAQLPVTFTLHASDRLFEVGHPAFLEPAPASGPVR
                     RLVVIDEKVYALHGEVIEQYFLRSGVEYKILPIVATETQKDLDTLMTILGAMETFHLL
                     RQSEPIIGIGGGVLLDVVGFAASIFRRGVPYIKVPTTLLALVDVSLGVKTAINHFGNR
                     NRLGTYHAPAAVFLDRSFLGTLDRRAFSNGLAEILKMGLLKDARLFELLEVHGPTLID
                     QKFQEGVALEVIDRAIQTMLEELEPNLWEKSLRRAVDFGHSFSPTIEMRVLPELTHGE
                     AVALDMLLSCELSHGRGLLPEADLTRIRRTAAQLGLPTYHEMFGDPGVLWESLADTVM
                     HRNGAQNLPMISRIGACTFFNDVTFEEVGQAAARLKARQHAEG"
     gene            2310..3383
                     /locus_tag="VK150_00725"
     CDS             2310..3383
                     /locus_tag="VK150_00725"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLP29851.1"
                     /translation="MQKDESTYLGRPSRMETHHRPDPDRYGLTPYRRCGASGLKLPPL
                     SLGLWQNFGDEARYSEARKLVLAAFDAGITHFDLANNYGNPPGSAERAFGRLLREDLH
                     PYRDQLVISTKAGYDMWPGPYGEWGSRKYLVASLDQSLRRLGVDYVDIFYSHRFDPGT
                     PLAETMGALAHLQRQGKALYLGISSYGPDETGRAVDLLTQQGTRCLVHQPSYSILNRW
                     VETTGLLEQLEGQGIGCVTFTALEQGLLTGKYRTGVPEGSRLSRPDSLLKPEILTAEL
                     SGAIARLEAIAHRRGQSLAQMALAWVLRRPLVCSTVIGVRTAEQLKENLLALEQLAFT
                     DDELQDIDRAASGCDTTLWPPNC"
     gene            3398..4477
                     /locus_tag="VK150_00730"
     CDS             3398..4477
                     /locus_tag="VK150_00730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29852.1"
                     /translation="MHGPTLLLPVAGRSSRYPGMRPKWLLTHPRGTLMLTEAIRGLEP
                     SQYGRIVIVALASHEKEYGFSEAIVAELAAEYGIPQTAIQVLLLKHETGSQPETIYEG
                     LKQAGVQGPFLVKDSDNHFAMPQVPAKNSVAVIDLNLCKPILVGNKSYVMQDGRGFIT
                     NIVEKQVISNWFCCGGYFFESAERFCRQFERLRGQTPLYPSTVIEGMLQEGDAFQTTE
                     AQHFEDWGTLPDWTAFKERYATLLIELDGVVVLDSHRHFEPRWGATEALRRNAQAISR
                     LYESGKTEIIIITSRPEAFEATTREQLRKNSIRFHRLLMGLPSGSRRVLVSGFSENTP
                     YPAAEAINLRVNDDRLDEHLLKLLP"
     gene            4474..>4740
                     /locus_tag="VK150_00735"
     CDS             4474..>4740
                     /locus_tag="VK150_00735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29853.1"
                     /translation="MTTDPPAGVPGGPDEANPFPADAQLYPNARLLVGHRLFAATYKG
                     VREENNHLLALDAHSRPIPHTYLGDIEGTPAIQTLAPAVDQTFHL"
BASE COUNT          835 a         1706 c         1386 g          813 t
ORIGIN      
        1 tcgacccctc gctcgcctcg gcaaagacct acctggccct cgactacgtg ctgggcgcga
       61 acctcgagcg gcccttcgag gccttccgcg ccctggcccc cttctgcggc gccaccctgc
      121 gcgatttctc ctacgacccc cccgaggggt acctcgccat tgagagctga ggaggccatg
      181 gcttcacgtc ccgaccaggt ggcttccacc acgaatggca ccctgacccg gctcaagggc
      241 ggatcgctca gcggcaccta cctgcttgag gctggcgcct atagatgtgt gcgcaaaacc
      301 atttccctgg aggagacccg ggaatacgga ttcatccgct ggcagtctca gctgaagcgc
      361 ctccagcggt tcggccagct gttcccgggc gtgttccccc aggtgctgga tgtgggccgg
      421 gagggcccca tcgcctactt cgacctcgaa tacatcgagc acgccatgtc gggatccgat
      481 ttcctggccg gcaaccctcc cgagcccgag gtccaggcct atgcccaggc cctgttcgag
      541 accatggaca agctccacgc catgaagcgc ccctcttgcc gcggggccct ggacctctat
      601 ctctacgagg aaatggaacg ccccctccgc atctgctgcg aggattccac tttccgtgcc
      661 tttctcgacc atccgaccct cgtgttcaac ggcgtggaga tcccttcgat cgcgacggtg
      721 ctgcccgacc tctaccgcct cggcgaggcc tcctggaagg acccctggga gtgctacacc
      781 cacggcaacc tcaccctcga gaacaccctc tgggtgcccg ccacccggaa gatctggttc
      841 atcgacccct atgaggagaa cgtcaccgac tcggttcaca acgagtattc gcagatcctc
      901 cagtcgagcc acgcgcgcta cgagatctgc aacgcgctcc ccccgacggt ggaggggaac
      961 cgggtcaccc tcgatatccc cgacgttccg ggcatccgac gattcaacga cctgttcatg
     1021 gtcctgctcg gggcccggct ttccgaggag gagcatcgcc tggtacggct ctacgagatt
     1081 tcccagttca cccggatgct ccccttcaag ctccacacgt cccgggaacg gatgatcttc
     1141 ttctacgccc tggcttcctt cctggcccac cagttgctgg aggacgtcca tggctgaccg
     1201 gaagcgctgg accctcacgg cgcaactgcc cgtcacgttc accctgcacg cgtcggaccg
     1261 tctgttcgag gtcggccatc ccgccttcct cgagccggcc ccggcctctg gaccggtccg
     1321 ccgcctcgtg gtgatcgacg agaaggtcta cgccctccat ggagaagtca tcgagcagta
     1381 cttcctccgc agcggtgtgg aatacaagat cctcccgatc gtggcgaccg agacccagaa
     1441 ggacctcgac accctgatga cgatcctcgg cgccatggag accttccacc tcctccgcca
     1501 gagcgagccc atcatcggca ttggcggcgg cgtgctcctg gatgtggtcg gtttcgcggc
     1561 gtccatcttc cgccgcggcg tgccctacat caaagtcccc acgaccctgc tcgccctcgt
     1621 ggatgtcagc ctcggcgtga agacggccat caaccatttc gggaaccgca accgcctggg
     1681 gacctatcac gcgccggccg ccgtgttcct ggatcggagc ttcctcggga cgctcgaccg
     1741 ccgagccttc agcaatggcc tcgccgagat tctgaagatg ggcctcctca aggacgcccg
     1801 gctgttcgaa ctgctcgagg tccacgggcc caccctcatc gaccagaagt tccaggaggg
     1861 cgtcgccctt gaggtcatcg accgcgccat ccagaccatg ctggaagagc tcgagccgaa
     1921 cctttgggag aagtccctgc ggcgcgccgt ggatttcggg cacagcttca gccccaccat
     1981 cgagatgcgc gtgcttccgg agctgacgca cggcgaggcg gtcgccctgg acatgctgct
     2041 gtcctgcgaa ctgtcgcatg gccgcggact gctgcccgag gccgacctca cccggatccg
     2101 tcggacagcc gcgcagctcg gccttcccac ctaccacgag atgttcggcg atcccggcgt
     2161 gctgtgggag tcgctcgccg acaccgtgat gcaccgcaac ggcgcccaga accttcccat
     2221 gatcagccgg atcggggcct gcaccttctt caacgacgtg accttcgagg aggtcggcca
     2281 ggccgccgca aggttgaaag cgaggcaaca tgcagaagga tgagtcgacc taccttggcc
     2341 gtccctcccg aatggagacc caccaccggc cagatcctga tcggtatggc ctcacgccct
     2401 accggcgttg cggagcgagc ggcctcaagc tgccgcctct gtccctgggg ctctggcaga
     2461 atttcggcga cgaggcgcgc tactcggagg cgcggaagct ggtgcttgcc gccttcgacg
     2521 cgggcatcac gcacttcgac ctggccaaca actacgggaa cccgcccggc agcgcggaac
     2581 gagcctttgg ccgcctgctc agggaggatc ttcaccccta tcgcgatcag ctggtgatct
     2641 ccaccaaggc cggctacgac atgtggcccg gaccctatgg tgaatggggc tcccggaaat
     2701 acctggtcgc cagcctcgat cagagcctcc ggcggctcgg ggtggattat gtggacatct
     2761 tctactccca ccggttcgat ccaggcacgc ccctcgcgga aaccatgggg gccctcgccc
     2821 accttcaacg acagggcaag gccctctacc tgggcatttc atcctacggc ccggacgaaa
     2881 cggggcgggc cgtagacctg ctcacccagc aggggacccg ttgcctcgtg catcagccct
     2941 cctactccat cctcaaccgc tgggtcgaga cgaccgggct cctcgaacaa ctcgaagggc
     3001 agggcatcgg ctgcgtcacg ttcacggccc tggagcaggg tctgctcacc gggaagtacc
     3061 gaaccggtgt gcccgaaggt tcccgccttt cccgcccgga ttcgctgctc aagcccgaga
     3121 tcctgacggc agaactgtcc ggggccatcg cccgcctgga ggcgatcgcc caccgccgag
     3181 gccagtccct ggcgcagatg gccttggcct gggtgctgcg gcgccccctg gtctgttcga
     3241 cggttattgg cgtgcggacg gcggagcagt tgaaggagaa ccttctggcc ctcgaacaac
     3301 tcgcgttcac ggacgacgag ctccaagaca tcgaccgcgc cgcgagcggg tgtgacacca
     3361 ccctttggcc accgaactgc tagccgcgga gccgcccatg cacggaccga ccctcctcct
     3421 tcctgtcgcc gggcgatcca gccggtaccc cggcatgcgg cccaagtggc tgctgacgca
     3481 cccccgcggc acgctcatgc tcacggaggc gatccggggc ctcgaaccct cgcaatacgg
     3541 gcggatcgtc atcgtcgccc tggcctccca cgagaaggag tacggattct cggaagccat
     3601 cgtggcggag ctcgccgccg agtacggcat cccgcagacg gccatccagg ttctcctgct
     3661 gaagcacgaa acgggaagcc aaccggaaac catctacgag ggcctgaagc aggccggcgt
     3721 ccaggggccc tttctcgtca aggactccga caaccatttc gccatgccac aggtgcccgc
     3781 gaagaacagc gtggccgtca tcgacctgaa cctctgcaag ccgatcctgg tcgggaacaa
     3841 gagctacgtc atgcaggatg ggcgaggctt catcacgaac atcgttgaaa agcaggtcat
     3901 cagcaactgg ttctgctgcg gcggctactt cttcgaaagc gctgagcgat tctgccgtca
     3961 gttcgagcgg ctgcgaggac agaccccgct ctacccctcc accgtcattg aggggatgct
     4021 ccaggaggga gacgcctttc agaccacgga agcccagcat ttcgaggatt ggggcaccct
     4081 cccggactgg accgcgttca aggaacgcta cgccaccctg ctcatcgaac tggacggcgt
     4141 ggtcgtcctg gattcgcacc ggcacttcga gccccggtgg ggtgccacgg aggccctgcg
     4201 gcgcaatgcc caggcaatca gccggctata cgagtctggc aagactgaaa tcatcatcat
     4261 cacctccagg ccagaggcct tcgaggcgac cacccgggag cagctccgca agaattccat
     4321 ccggttccac cggctcctca tgggcctgcc cagcggcagc cggcgcgtgc tcgtgtcggg
     4381 gttctctgag aacacgccct accccgccgc cgaggccatc aacctgcggg tcaatgacga
     4441 ccggctcgat gagcacctgc tgaagcttct gccatgacga ccgatccccc agcgggcgta
     4501 cccggggggc ctgatgaggc gaatcccttc cccgcggatg cccagctcta tcccaatgcg
     4561 cgcctgcttg tcggacatcg cctgttcgcg gccacctaca agggcgttcg ggaggagaac
     4621 aatcacctcc tggcgctcga tgcgcattca cgtcccattc cgcacaccta cctgggtgac
     4681 atcgaaggca cgcccgcgat ccagaccctg gccccggccg tcgaccagac cttccacctc
//
LOCUS       DATGWW010000056         1621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_275710, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000056 DATGWW010000000
VERSION     DATGWW010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_275710"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..874)
                     /locus_tag="VK150_00740"
     CDS             complement(<1..874)
                     /locus_tag="VK150_00740"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HLP29854.1"
                     /translation="MIPVDAHWVRVNRFFGDAMMAYAAIEPLRRAGLPLVVWGPGHIV
                     DLFAGSAQVVGTVAEPNRKYGVWEAARMLRELRPASVIGFPKSARPHAASLLARVPLR
                     LGCGDGGVSLLLTHSVPFYKRQDHFVERYASVVTRAFPQLGPMGFTPFRPREEAFDRC
                     AVQAAEAGITGDYVVLAPGANSGSKRLSVPLFAALGRRLESQGLQVVILGAGAEDQRL
                     AGELTARLPHALNLVDRCSLSLSAAWICGARGLVGMDSGLAHIAGGAGIPTLAVFGPT
                     RPQHSRPWGPRVGVI"
     gene            complement(871..>1621)
                     /locus_tag="VK150_00745"
     CDS             complement(871..>1621)
                     /locus_tag="VK150_00745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29855.1"
                     /translation="RAWKPGDPARRFLLVAFLVPFLFLSAVQSKQGKYLLMGYPFLAL
                     LLADLFRSAEPARARRLGGLLAGGLALPAAALTALALGFGGAKVQGQVAPFLGPLRLM
                     AAVMIAGTGFVLVQAIQGRMARLVPGVALTLGLLYLVGGTWGFRLLDPQKAYRRWTTA
                     AQPLIAGRQVFYWQTMRSGVMVYTDHLMPELRTAAALAAMDPEARLVAQRGEWETDAW
                     GMTPELRARFEVLLAVPTGGGEILLLRKRSA"
BASE COUNT          260 a          589 c          600 g          172 t
ORIGIN      
        1 ggatcacccc gacgcgaggt ccccaggggc gggaatgctg gggccgcgtc gggccgaaca
       61 ccgccagggt ggggattccg gcgccgccag cgatgtgggc cagcccagaa tccatgccca
      121 ccaggccccg ggcgccgcag atccaggcgg ccgacagcga gaggctgcag cggtccacca
      181 ggttgagggc gtggggcagc cgcgcggtga gctccccggc cagccgctgg tcctccgcgc
      241 ccgcccccag gatcaccacc tggaggccct gactttccag gcgccggccc agggcggcga
      301 agaggggcac ggacaggcgc ttggagccgc tgttcgcacc gggggccaac accacgtagt
      361 cgccggtgat tccggcctcc gcggcctgga cggcgcaccg gtcgaaggcc tcttcccgcg
      421 ggcggaaggg cgtgaagccc atggggccta actgcgggaa ggcccgggtc accacggagg
      481 cgtagcgctc cacgaagtga tcctggcgct tgtagaaggg gacgctgtgg gtgagcagca
      541 ggctcacgcc gccatccccg cacccgagcc gcaggggcac ccgcgccagc aggctggcgg
      601 catggggccg ggcgctcttg ggaaagccga tgaccgaggc cgggcgcagc tcccgcagca
      661 tgcgcgccgc ctcccacacg ccgtacttcc ggttgggttc ggccacggtg cccaccacct
      721 gggcgctgcc cgcgaagaga tccacgatgt gccccgggcc ccagaccacc aggggaagcc
      781 cggcgcggcg caggggctcg atggccgcgt aggccatcat ggcgtcgccg aaaaagcggt
      841 tcacccgcac ccagtgggca tcaacaggaa tcatgcggac ctcttccgga gcagcaggat
      901 ctcgccgccg ccggtgggca cggcgagcag cacctcgaag cgggccctca gctccggggt
      961 catgccccag gcatcggtct cccactcgcc gcgctgggcc accaggcggg cctccggatc
     1021 catggccgcc agggcggcgg ccgtgcggag ctccggcatc aggtggtcgg tgtagaccat
     1081 cacgccgctg cgcatggtct gccagtagaa gacctggcgg cccgcgatca ggggctgggc
     1141 ggccgtggtc cagcggcggt aggccttctg gggatcgagc aggcggaagc cccaggtgcc
     1201 gcccaccaga tagagcagcc ccagcgtcag cgccacgccg ggcaccagcc gggccatccg
     1261 cccctggatg gcctggacca ggacgaaccc cgtgcccgcg atcatgaccg cggccatgag
     1321 ccggagcggc cccaggaagg gggcgacctg gccctgcacc ttggcgccgc caaagcccag
     1381 cgccagcgcc gtcagggccg ccgccggcag ggcgagcccg cctgccagca aaccgccgag
     1441 gcgccgggcg cgggcgggct ccgccgaccg gaagaggtcg gccagcagca gcgccaggaa
     1501 ggggtagccc atgagcaggt acttgccctg cttgctctgg accgcgctga ggaacaggaa
     1561 gggcaccagg aaggccacca ggaggaagcg ccgggcggga tccccgggct tccaggcgcg
     1621 c
//
LOCUS       DATGWW010000057         1698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_50075, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000057 DATGWW010000000
VERSION     DATGWW010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50075"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..290
                     /locus_tag="VK150_00750"
     CDS             <1..290
                     /locus_tag="VK150_00750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29856.1"
                     /translation="MTLVPALPRVLSAALPRPGRSGPPLPLLRLTLNREGHLDVGDRL
                     GESLAAALARQPDRIVLRVHPDLPLSAPTRVLDEIEGLRPGTKVAVVAWPS"
     gene            313..671
                     /gene="rnpB"
                     /locus_tag="VK150_00755"
     ncRNA           313..671
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VK150_00755"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            1021..>1698
                     /locus_tag="VK150_00760"
     CDS             1021..>1698
                     /locus_tag="VK150_00760"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLP29857.1"
                     /translation="MSQDFQALVRRLERAQAMQNERFNQAGGGQSLPLGGGFAHFRGV
                     GHPLNQALGLLEPLAEADLDAIEAFLGQPTVLELSPGADPELWAQLARRGYRLHQFQQ
                     LWTCALEPQDSLTPAPGIRLADPSESDVFNQVVCAGFLERDDWRGLTPPFEVSLDTPG
                     AWGFLAFLEGQPAGGAMLGIVDGVALLSGDGVIPSCRGRGLQKALIRARLAFARDRGC
                     DVACASTV"
BASE COUNT          248 a          601 c          578 g          271 t
ORIGIN      
        1 tcatgacgct ggtgccggcc ctgccgcggg tgctctccgc ggccctgcct aggccgggac
       61 gatccggccc gcccctgccc ctgctgcgcc tcacgctcaa ccgcgagggg cacctggacg
      121 tgggtgaccg tctgggcgaa tctctggcgg cggccctggc ccgtcagccg gaccggatcg
      181 tgctgcgggt gcatcccgac cttccgctca gcgcccccac ccgggtgctg gacgagatcg
      241 aagggctgcg tcccggcacg aaggtggccg tggtggcctg gcccagctag tgctcgtgct
      301 acgctggccc ccgtggatca gggcgtcgct gctcgcgagg gcagaggaaa gtccgggctc
      361 cacagggtac tgggcctggt aacaccaggg cggggtgacc cgacggaaag tgcaacagag
      421 aacaaaccgc cgatggccac gcaagtggat caggcaaggg tgaaacggtg gggtaagagc
      481 ccaccgccgg actggcaaca gcacgggcat ggcaaacccc ccagggagca agaccaaata
      541 ggccagcgca ccgcgcaagc ggcgagggtt gacccgaccg agctggcggg taggtcgcac
      601 gaggtggctg gtgacatcca tcccagagga atgacgctcc acgacagaac ccggcttacc
      661 gatccaccac agcctccgtt agggggctgt gctttgtact cgctcatcgt gattccctcc
      721 tcgccgggtc ccgacttcgc aggctccccc ggagcctgct gcgtcacccg gcggtcggga
      781 gaacccggct tatcgatcca ccacagcctc cgttaggggg ctgtgctttt gttcagcagc
      841 agcctcggct agcctggagg ctgttctccg agtaggcctc tgacttccct ccgacagccc
      901 cgaacctccg cgcctggact tggcgggaga gccgcgcgcc tcggctgacc ttccggcgcg
      961 aagtcccacg ggccgcccat ctgcggtccg cacggtttca gtgtttttcg gagttcaccc
     1021 atgtcacagg atttccaggc cctggtgcgc cgcctcgagc gcgcccaggc catgcagaac
     1081 gaacgtttca accaggctgg cggcggccag agcctgcccc ttggcggcgg cttcgcccat
     1141 ttccgcggcg tgggccatcc cttgaaccag gccctgggcc tgctggaacc cctggcggag
     1201 gccgacctcg acgccatcga ggccttcctt ggccagccca cggtgctgga gctgagcccg
     1261 ggcgccgatc cggaactgtg ggcgcagctg gcccgccgcg gctaccgcct gcaccagttc
     1321 cagcagctgt ggacgtgcgc gctcgagcca caggattccc tcacgccggc cccgggcatc
     1381 cgcctggccg acccgagcga atccgacgtg ttcaatcaag tcgtctgtgc ggggtttctc
     1441 gagcgggacg actggcgcgg cctgacgccg cccttcgagg tgtcgctgga caccccgggc
     1501 gcatggggct ttctcgcctt cctggagggc cagcccgcgg ggggcgccat gctcgggatc
     1561 gtggatggcg tggcgctgct ctcgggtgac ggcgtgatcc caagctgccg tggccggggc
     1621 ctgcaaaagg cgctcatccg ggcccggctg gccttcgccc gggaccgggg ctgcgacgtg
     1681 gcttgcgcgt ccaccgtc
//
LOCUS       DATGWW010000058         4154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_4860, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000058 DATGWW010000000
VERSION     DATGWW010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4154
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4860"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2193
                     /locus_tag="VK150_00765"
     CDS             <1..2193
                     /locus_tag="VK150_00765"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HLP29858.1"
                     /translation="LVHLAPGPGAKACALAFLGLAAGLLALDLLDLPAPWPAREAGTD
                     EARRLLRSALATAALVAGTFFVVGLGRMAASGLPGFREGAATLGWSLLAHGLVLSMAA
                     VAILGLQSAAGFFPRAQGAEFLLHLAGVAGLAAAALRLVVFPGIAFAGPFAWAVALLL
                     GFCLAAFLALAGLGLTPRLGPPASALEAFLRPLHPLRPSAAGLALGLAAAVALILLVS
                     LKVSRFDWNHLFQQLGALLAAALVFAPLYLRQSAAAGAHSWSSRLFLAPLLLLALFRT
                     WGTPRLQPAAGWLPHPSAKAVERHTGFDASARLAGTVLRPSAEGGDAIYRLLLANSNI
                     PHAVDIAAKDLHLVESLAPARGERPDIYIFVVDSLRQDHLGAYNPKVTFTPNLDRFAA
                     ESTVMPKAFTRYGATGLSEPSIWVGGMLLHKQYIVPFHPLNTLQKLIAADGYRPLLSM
                     DSILDVIVKPTPDLIRLDAGVGTGDLRLGATLQDLARKLDQVPSDRPLFVYSQAQDLH
                     ISSIQREGKDVPGGGEYPGFYAPYASRVRRLDAQFGAFIQRLKDRGRYDRSLIIFTAD
                     HGDSLGEDGRFGHAYTLFPEIMKVPLLLHVPEKLRAGLQVDADRAAFLTDITPTLYYL
                     LGHRPLIADPVLGRPLFTATQAERDRHRRDHHLIASSYGAVWGILSGTGDRLYIADGV
                     NFVDHCFDLTDPAGKSIPVTPELKRRYDRLIVEDLDHLNAFYAFHPGK"
     gene            2199..3422
                     /locus_tag="VK150_00770"
     CDS             2199..3422
                     /locus_tag="VK150_00770"
                     /inference="COORDINATES: protein motif:HMM:TIGR04390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YaiO family outer membrane beta-barrel protein"
                     /protein_id="HLP29859.1"
                     /translation="MRLRPLLLLPCLFLPLQAQPAPQEGVDELFARARKLAFSGQRAE
                     AIALCRIALQRSPAYHDIRILVGRIHAWEGRYDEGRAELQQVLKAAPGHPDGRVALVD
                     LELWSDHPQAALVLCDEGLALHPAQPQLLFRKARAQKALGAYAEALATAKLAQAADPN
                     LFEARQLIENLAELTQRSKVSLNATYDRFDRTFDPWRMTSLSLAHRFDAGSLIGRINR
                     AERFGDTGHQVEVDAYPRWVDGTYFYLNAGFSEAGIFPHRRYGAEIYHNFPRGIEGSL
                     GLRHLRFSASNVTIYTGSLGKYWGDYLFTFRANATPSSIGASKSGSVSARRYFGDGEN
                     HLTLTLGSGVSPDQPNPSAEILNLRSRKAGLAAQGWIHRRLILSGGLSYEKQELGSGV
                     ERAQTTFSAGLEWRF"
     gene            3480..3884
                     /locus_tag="VK150_00775"
     CDS             3480..3884
                     /locus_tag="VK150_00775"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP29860.1"
                     /translation="MNRLWPEPTRVLVVEDDQATARIIQARLEMEGLIVFLAANGVDG
                     LDILHREEIDLVTTDLMMPAMNGFRLVQEIRDLPPPKGRVPILLISSNQNEQDMVRCL
                     AAGADDYMTKPISAQVLVERLWRMHQRARSSS"
     gene            3892..>4154
                     /locus_tag="VK150_00780"
     CDS             3892..>4154
                     /locus_tag="VK150_00780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29861.1"
                     /translation="MRLQPERVLQILIWGSLVLASFLGVLVVLGAWIQYQQDRLNRRR
                     IERFQAWEGDLARYLFSAEGEPRPFPEIAPQDKRLFQRFLARY"
BASE COUNT          565 a         1620 c         1285 g          684 t
ORIGIN      
        1 ctggtccacc tggcgcccgg ccctggggcg aaggcctgcg ccctggcgtt cctcgggctc
       61 gcggcgggcc tgttggccct cgacctgctg gacctccccg ccccctggcc cgcccgcgag
      121 gcgggcactg acgaggcccg gcggctgctg cggtcggccc tggcgacggc ggccctcgtg
      181 gccggaacct tcttcgtcgt ggggctggga cggatggcgg ccagcgggct tccgggcttc
      241 cgggagggcg ccgccaccct gggctggagc ctcctcgccc acgggctggt gctcagcatg
      301 gccgccgtgg cgatcctggg gcttcaatcg gcggcgggct tcttcccgcg ggcccagggc
      361 gccgagttcc tgctccacct cgcgggcgtc gcggggctcg ccgccgccgc cctgcgcctc
      421 gtcgtcttcc ccggcatcgc cttcgcgggc cccttcgcct gggccgtggc cctcctgctg
      481 ggattctgcc tcgccgcctt cctcgcgctc gcgggcctcg gcctgactcc gcgcctgggc
      541 cccccggcca gcgccctcga ggccttcctc cgccccctcc atccgctgcg cccctcagcg
      601 gccggcctgg ccttgggcct tgccgcggct gtcgccctca tcctgctcgt gtcgttgaag
      661 gtctcccggt tcgactggaa ccatctgttc cagcagctgg gggccctcct cgccgcggcc
      721 ctggtcttcg cgccgctcta cctgcgccag tcggcggcag ccggagccca ctcctggtcc
      781 tcgcggctat tcctcgcgcc cctgctcctc ctggcgctgt tccgcacctg gggcacgccg
      841 cgcctccagc ctgcggccgg ctggctgccc cacccttcgg ccaaggccgt cgagcgccac
      901 accgggttcg acgcctccgc gcggctggcg ggcacggtcc tgcgccccag cgctgagggc
      961 ggcgacgcca tctaccgcct gctcctggcc aacagcaaca tcccccacgc ggtggacatc
     1021 gcggcgaagg acctgcacct ggtggaatcc ctggcgccgg cccgcggcga acggcccgac
     1081 atctacatct tcgtggtgga cagcctccgc caggatcacc tcggcgccta caacccgaag
     1141 gtgaccttca cgccgaacct cgaccgcttc gccgcggaga gcacggtgat gccaaaggcc
     1201 ttcacccgct acggcgcgac gggcctttcc gagccctcga tctgggtggg cgggatgctg
     1261 ctgcacaagc agtacatcgt tcccttccac cccctgaaca ccctccagaa actgatcgcg
     1321 gcagacggct accggcccct gctctcgatg gattcgatcc tcgacgtcat cgtgaaaccc
     1381 acacctgacc tgatccggct cgacgccggc gtcggcaccg gcgacctgcg cctgggcgcc
     1441 accctccagg acctggcgcg gaaactggac caggtgcctt cagaccgccc gctcttcgtc
     1501 tacagccagg cccaggacct ccacatctcc tccatccagc gcgagggcaa ggatgtgccc
     1561 ggcggcggcg agtacccggg cttctacgcc ccctatgcca gccgggtgcg gcgcctggac
     1621 gcccagttcg gcgccttcat ccagcgcctg aaggaccggg gccgctacga ccgcagcctc
     1681 atcatcttca cggccgacca cggcgattcc ctgggcgagg acggccgctt cggccacgcc
     1741 tacaccctct tccccgagat catgaaggtg cccctcctcc tccacgtgcc ggaaaaactc
     1801 cgcgctggac tgcaggtgga tgcggaccgt gccgcgttcc tcacggacat caccccgacg
     1861 ctctactacc tgctggggca ccgtccgctg atcgcggatc ccgtcctggg ccgccccctg
     1921 ttcacggcca cccaggccga gcgggaccgc caccgccgcg accaccacct catcgcctcc
     1981 agctacggcg cggtctgggg catcctctcc gggaccggcg accgcctcta cattgccgac
     2041 ggcgtgaact tcgtggatca ctgcttcgac ctgaccgacc ccgcggggaa gtccatcccc
     2101 gtcacgcccg agctgaagcg gcggtacgat cggctgatcg tcgaggacct cgaccacctc
     2161 aacgccttct acgcattcca tcccgggaag tgatcgccat gcgcctccgt ccgctcctgc
     2221 tcctgccctg cctcttcctg ccccttcagg cccagccggc cccccaggag ggtgtggacg
     2281 agctgttcgc ccgggcccgg aaactggcat tcagcggcca gcgggcggag gccatcgcgc
     2341 tctgccggat cgccctccag cgcagcccgg cctaccacga catccgcatc ctggtgggac
     2401 gcatccacgc ctgggagggc cgttacgacg agggccgcgc cgagctccag caggttctga
     2461 aggccgcgcc aggccacccg gatggtcgcg tggccctggt ggacctggag ctctggtcgg
     2521 atcatcccca ggcggccctg gttctctgcg acgagggcct cgccctccac ccggcccagc
     2581 cgcagctgct cttccggaag gcccgggccc agaaggcgct gggtgcctat gccgaggcgc
     2641 tggccaccgc gaagctcgcc caggcggcgg atcccaacct gttcgaggcg cgccagctca
     2701 tcgagaacct cgcggagctc acccagcggt cgaaggtatc cctcaacgcc acctacgacc
     2761 gcttcgaccg caccttcgat ccctggcgca tgacctcgct cagcctggcc caccgcttcg
     2821 atgccggttc cctcatcggc cgcatcaacc gggccgagcg cttcggcgac acgggccacc
     2881 aggtcgaggt ggacgcctac ccgcgctggg tggacggcac ctacttctac ctgaacgccg
     2941 ggttttccga agcgggcatc ttcccccacc gccgctacgg cgcggagatc taccacaact
     3001 tcccgagggg catcgaaggc tccctgggcc tgcggcattt gcggttcagc gcctcgaacg
     3061 tgaccatcta caccgggtcg ctggggaagt actggggcga ctacctcttc accttccggg
     3121 ccaacgccac gccgagctcc atcggcgcgt cgaagtcagg ttcggtctcc gcgcggcgct
     3181 acttcggcga cggcgagaac cacctcaccc tcacgctcgg ctccggcgtc tcgcccgacc
     3241 agcccaatcc cagcgcggag atcctgaacc tccgctcccg caaggccggg ctggctgccc
     3301 agggctggat ccaccggcgg ctcatcctct cgggcggcct gtcgtacgag aagcaggagc
     3361 tcggctcggg cgtcgagcgg gcccagacca ccttcagcgc tggactggag tggcggttct
     3421 gaatcggcca ttccttgttg gaatcactga atcagcatct tttttgctat tctgcggtca
     3481 tgaatcggct ttggcctgaa cccacccggg tcctcgtcgt ggaggacgac caggcaaccg
     3541 cccggatcat ccaggcgcgc ctggagatgg aggggctcat cgtcttcctg gccgccaatg
     3601 gcgtggacgg cctcgacatc ctccaccgcg aggagatcga cctcgtcacc acggacctca
     3661 tgatgcccgc catgaacgga ttccggctgg tgcaggagat ccgcgacctg ccgccgccca
     3721 agggacgggt gcccatcctg ctcatctcca gcaaccagaa cgagcaggac atggtgcgct
     3781 gcctcgcggc gggcgccgac gactacatga ccaagcccat ttccgcgcag gtgttggtgg
     3841 agcgcctctg gcgcatgcat cagcgcgccc gctcctcgag ctgagggcgc catgcgtctg
     3901 cagccggaac gggtgctcca gatcctgatc tggggatcgc tggtgttggc gtcgtttctc
     3961 ggtgtcctgg tcgtgctcgg ggcttggatc cagtaccagc aggaccgcct gaaccggcgg
     4021 cgcatcgaac gtttccaggc ctgggaaggc gatctcgccc ggtacctctt cagcgcggag
     4081 ggcgagcccc gtcccttccc ggagatcgcg ccgcaggaca agcgcctctt ccagcggttc
     4141 ctcgcccgct acca
//
LOCUS       DATGWW010000059         5353 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_411687, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000059 DATGWW010000000
VERSION     DATGWW010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5353
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411687"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2502
                     /locus_tag="VK150_00785"
     CDS             <1..2502
                     /locus_tag="VK150_00785"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HLP29862.1"
                     /translation="TRFAADLFLVRQRGSAATEGGIAEDYVLGTGDRLNLNVFGSATF
                     DLPVQVDGRGEIVIPKVGTAKVGGLTLGKAKTVVQGLVGRNFSRSTVDLQVIKLREVR
                     VFVMGEVYKPGSYLVSSLSSLVNVLSLAGGPTAVGSYRDIRVMRGGRQVAGLDLYPLR
                     AEGLGNPNVALQSGDTVFVPLAQSQVILEGAFQRVVAQPAEAPKKGDHSEAAANDLDP
                     LKEQRERFQREIKAIEAQLASGQEVKVDDAQEQGGTGPGRTLKPPVELSLSERTTLED
                     RLFFLKRQLMTLKDAPAGDHRIRLNPETNLPILQSDSSRQPDWLRRWEQSGRAPAMQF
                     EMKSGETVADALRFAGGLAMEAGEGTLNLRHRDGAGITRGLDVTLAEAGRIAVRRGDV
                     LSAPVRREWTGPVVELSGWVRVPGFYARQEGMRVADLLKRQEQVLPDTYRARGEVVHT
                     ALDGTTRFQTFDVDKALAGDPANNILLEDRDRIELFRLEDLRLPRLVTVIGPVARPGT
                     YAFHAGMRASDLIFRAGVPAKWADRLVAELAHSREGRPSEVIRLDLTKLLSSEAGSPL
                     SLVDDSVNPRIEADDQLSLFEKPDFKVHRTVRITGQVLRPGFYTLDSDRPRLSDLLQR
                     AGGLTPEAMPQAGIFLRRMNAQDPSLQRAAVESGLAGKDPTAKGINEILERLNETRRQ
                     PLSGQLQKNPLLHGLMSGSLNRMVVDFRAAMKGDAQSDVDLEDGDEIVIPRISEAAYV
                     VGETASPFATYKVGKGMKVADLLKLAGGPTRNADMSNLRLLKADGRILDSWVEGKPVE
                     PGDTVLVPQRIRRDTNWQENLQALTPLALILNAIK"
     gene            2565..2912
                     /gene="queD"
                     /locus_tag="VK150_00790"
     CDS             2565..2912
                     /gene="queD"
                     /locus_tag="VK150_00790"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HLP29863.1"
                     /translation="MILRKEYWFEAAHFIYNHPGKCRNLHGHSYKLFVLLEGAVNPET
                     GMIIDFDDLSKVVVEQVISKLDHRFLNDLIPLSTAENISVWIWGQLKPLLPQLCQIEV
                     FETTDNCVIYRGA"
     gene            2914..3414
                     /locus_tag="VK150_00795"
     CDS             2914..3414
                     /locus_tag="VK150_00795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29864.1"
                     /translation="MRRLWALPALVLLVGCEAINPALRYQEAARQLRFTLDRVEPRLE
                     LAFPLEQSRLRIRLDVGVDNPSDQRLRTRRVAGDLRLTAQGADHAIGAVSFPEGADLA
                     PKSRSVLKVDVALGYGDLKAAWGPLSGAVLRHEPATWNLSGEARFEVLGIEFGVPFRT
                     RKDSGR"
     gene            3428..4108
                     /locus_tag="VK150_00800"
     CDS             3428..4108
                     /locus_tag="VK150_00800"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HLP29865.1"
                     /translation="MIRAVVFDLWNTLVFSPAGSPFQRMRDLLRPDQAHAFKTLVRDG
                     MARPHASVRSFLEAWQQPVGLDAEQVEAMAQAFQEAGAQAECFAGAPEAVGAVRDLAR
                     VALLSNTQTFGLELLDRLGISERIRTRMLSAEIGALKPEAAAFEAVQRKLGAFPGNLV
                     MVGDSWTDDVEGAIAAGWTAVWVNRDGAPRPAHDPDAPIYEVRNLSRLPELIQGLQNG
                     LRCPTCLG"
     gene            complement(4134..>5353)
                     /locus_tag="VK150_00805"
     CDS             complement(4134..>5353)
                     /locus_tag="VK150_00805"
                     /inference="COORDINATES: protein motif:HMM:TIGR00757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HLP29866.1"
                     /translation="LPPLKEGEETLVQVVKDPIGSKGPRLSRHLSFPGRFLVFMPGID
                     HIGISRKITDPEERERLRELIRSHVQPGEGFIVRTAAIGEKDEDLIGDVIFLRQMWQE
                     IRAKAEVVPAPGLVWQDLRLLQKVMRDIFREEVSTFWVDDSTAHQEVLAFVEKLHPEW
                     ANRVKHFTSDLPIFEAFGIEAEIDAARQPKVFLKHGGSIVLNQTEALVSVDVNTGKFV
                     GKKDLEETVYLTNLEAIPEIVRQLRLRNLGGIVVIDFIDMVDPAHRDEVLTRLQDELK
                     RDRNHARAGGISEFGLVELTRKRTGPSLERQLTQPCPTCNGAGRTQNPETSLLKAYRE
                     MVRLGERLRGADVRLTLHPELAAALHQEAREGLLQLARLLGARVQWIERADTPRYAVI
                     LDLQMPGQATASA"
BASE COUNT          858 a         1736 c         1857 g          902 t
ORIGIN      
        1 acgcggtttg ccgcggacct gttcctggtt cgccaacggg gatcggctgc caccgagggg
       61 gggatcgccg aggactacgt cctgggaacc ggggaccggt tgaacctcaa cgtgttcggc
      121 agcgccacct tcgacctccc ggtccaggtg gatggccggg gcgagatcgt gattcccaag
      181 gtgggcaccg ccaaggtggg cggactcacg ctggggaagg ccaagactgt ggttcagggc
      241 ttggtggggc ggaacttctc ccgttcgacg gtggatctgc aggtgatcaa gctccgcgag
      301 gtgagggtct tcgtcatggg cgaggtctac aagcccggca gttacctggt gtcgagcctg
      361 agttccctgg tgaacgtgct cagcctggcg ggcggtccca ccgccgtggg cagctaccgt
      421 gacatccgcg tgatgcgggg cggccggcag gtcgctggcc tggacctcta cccccttcgc
      481 gcggaggggc tgggcaatcc caatgtggcc ctgcagagcg gcgacacggt cttcgtgccg
      541 ctggcccagt ctcaggtcat cctggagggg gccttccagc gggtggtggc ccagccggcc
      601 gaggctccga agaagggcga ccattcagaa gccgccgcca atgatctgga ccccctgaag
      661 gaacaacgcg agcggttcca gcgggagatc aaggccatcg aggcccagtt ggcgtcgggc
      721 caggaggtca aggtagatga tgcccaggag cagggtggga cggggccggg ccgaacactg
      781 aagccgcccg tggaactcag cctgtccgaa cgaacaaccc tggaggaccg gctgtttttc
      841 ctgaagcggc agctgatgac cctcaaggat gccccggccg gggaccaccg gatccgactc
      901 aatccggaga caaaccttcc catcctgcaa tccgattcaa gccggcaacc cgactggctt
      961 cggcgttggg agcagtcggg cagggcgcct gccatgcagt ttgaaatgaa gtcgggggag
     1021 acggtggctg atgccctgcg attcgcgggt ggcttggcca tggaagccgg tgagggcacc
     1081 ctcaacctgc ggcaccgcga tggcgcaggc atcacccgtg ggctggacgt gacgcttgcc
     1141 gaagccgggc gaatcgccgt ccgccgtggc gacgtgcttt ccgcgccggt gcgccgggag
     1201 tggacggggc ccgtcgttga gctttccggc tgggtgcggg tgcccggctt ctatgcccgg
     1261 caggagggca tgcgggtggc ggacctcctg aagcgccagg agcaggtgtt gcctgacacc
     1321 taccgggctc ggggcgaggt ggtccacacg gctctggatg gcaccacgcg cttccagacc
     1381 tttgacgtgg acaaggcctt ggcgggcgac cctgcgaaca acatcctgct ggaggaccgc
     1441 gatcgaatcg agctgtttcg cttggaagac ctgcgcctgc cccgcttggt cacggtgatc
     1501 gggccggtgg cccggcccgg cacctatgcc ttccatgccg gcatgcgggc ctctgacctg
     1561 atcttcaggg ctggcgtgcc cgccaaatgg gcggaccgcc tggtggcgga actggcccat
     1621 agccgggagg gccggcccag cgaggtgatt cgtctggacc tcacgaagct cctctcttcc
     1681 gaagcgggaa gccccttgag cctcgtggac gattcggtga acccccgcat cgaagccgat
     1741 gaccagctca gcctgttcga gaagcccgat ttcaaagtgc accgcactgt ccgcatcact
     1801 gggcaggtcc tccgcccggg gttctacacc ctggattcag atcgcccacg cctctcggat
     1861 ctcctccagc gggccggggg cttgaccccc gaggccatgc cccaagcggg catcttcctc
     1921 cgtcgcatga acgcccagga cccttcgctc cagcgggccg ccgtggaatc cggcttggcg
     1981 gggaaggatc ccacggccaa gggtatcaat gagatcctcg aacgcctgaa cgagaccagg
     2041 cgccagccgc tgtcgggcca gcttcagaag aacccgctgc tacacgggct catgtcgggt
     2101 agcctgaatc gcatggtggt ggacttccgc gcggccatga agggggatgc ccaatcggac
     2161 gtggacctgg aggatgggga cgagatcgtc attccccgca tctccgaggc agcctacgtg
     2221 gtgggcgaga ccgccagtcc cttcgccacc tacaaggtgg gcaagggcat gaaggtcgcg
     2281 gatctgctga agctggcggg cgggcccacc cgcaacgccg acatgtccaa cctccgcctg
     2341 ctcaaggccg acgggcgcat cctggacagc tgggtggaag gcaagccggt ggagccgggc
     2401 gacacagtcc tggtgcccca gcgcatccgc cgcgacacca actggcagga gaacctccag
     2461 gccctgacgc cgctggcgct gatcctgaac gccatcaagt aggctgccgc ctgctggtag
     2521 aatgaagggc cccgttcccg cggggccttt tcttcgtgag tgccatgatc ctgcgcaaag
     2581 agtactggtt tgaagccgcc cacttcatct acaaccaccc gggcaagtgc cggaacctcc
     2641 atggccacag ctacaagctc ttcgtgctgc tggaaggtgc cgtgaacccc gagacgggca
     2701 tgatcatcga cttcgacgac ctctcgaaag tcgtggtcga gcaggtgatc tccaagctgg
     2761 accaccgatt cctgaacgac ctcatccccc tttctactgc ggagaacatc tccgtctgga
     2821 tctgggggca gctgaagccg ctgctgcccc agctgtgcca gatcgaggtg ttcgagacca
     2881 ccgacaactg cgtgatctac cgcggagcct gagatgagac gcctctgggc cctgcccgcg
     2941 ctggtgctcc tggtcggctg cgaggccatc aaccccgccc tgcggtacca ggaggcggcc
     3001 cggcagctgc gcttcaccct tgatcgggtc gagccgcgcc tcgagctggc ttttcccctg
     3061 gagcagtcgc ggctgcgcat ccggctcgac gtgggcgtgg acaatccgtc ggaccagcgg
     3121 ctgcgcaccc gtcgggtggc cggtgacctg cgcctgactg cccagggcgc tgaccacgcc
     3181 atcggcgcgg tgagttttcc cgaaggcgcg gacctcgccc cgaaaagccg cagcgtcctg
     3241 aaggtggatg ttgccttggg ctacggggac ctgaaggcgg cctgggggcc cctgtccgga
     3301 gcggtcctcc gccatgaacc tgcgacctgg aacctctccg gcgaagcccg cttcgaagtg
     3361 ctgggcatcg agttcggcgt gcccttccgc actcgcaagg acagtggtcg atgaggcgac
     3421 tgaacccatg atccgggccg tcgtcttcga cctctggaac accctggtgt tcagccccgc
     3481 gggcagcccc ttccagcgga tgcgggacct cctgcgcccg gaccaggccc atgccttcaa
     3541 gaccctggtg cgcgatggca tggcgcggcc ccatgcctcg gtgcggagtt tcctcgaggc
     3601 ctggcagcag ccggtggggc ttgacgctga gcaggtggaa gccatggccc aggccttcca
     3661 ggaggccggg gcccaggccg agtgcttcgc cggagcgccc gaggccgtgg gcgcggtgcg
     3721 ggacctggcg cgggtggcgc tcctctccaa tacccagacc tttggcctgg agctgctcga
     3781 ccgcctgggc atcagcgagc ggatccgcac ccggatgctg agcgccgaga tcggggccct
     3841 caagcccgaa gccgccgcct tcgaggccgt ccagcgtaag ctgggggctt ttcccggcaa
     3901 cctcgtgatg gtgggcgaca gctggacgga cgacgtggaa ggcgccattg ccgcaggctg
     3961 gacggccgtc tgggtaaacc gggacggcgc cccgcggccg gcccatgatc ccgatgcgcc
     4021 catctacgag gtgcgcaacc tctcccgcct ccctgagtta atccagggat tgcaaaacgg
     4081 cctgcgctgc ccaacctgcc tgggctgagg gccgggccga gagggggtga aacctaggcg
     4141 ctggcggtgg cctggcccgg catctgcaga tccaggatca ccgcatagcg gggcgtgtcg
     4201 gcgcgctcga tccactggac gcgggcgccg agcaggcggg cgagctggag caggccttcc
     4261 cgggcttcct ggtggagggc ggcggccagt tccgggtgga gggtcaggcg cacgtccgcg
     4321 ccccgcaggc gctcgcccag gcggaccatc tcgcggtagg ccttgagcag ggaggtctcg
     4381 gggttctggg tgcggccggc gccgttgcag gtgggacagg gctgggtgag ctggcgctcc
     4441 agggatgggc ccgtgcgctt gcgggtgagt tccaccaggc cgaattcgga gatgcccccg
     4501 gcgcgcgcgt ggttccggtc gcgcttgagt tcgtcctgca gccgggtgag cacctcgtct
     4561 cgatgcgccg gatccaccat gtcgatgaag tcgatcacca cgatgccgcc caggttgcgc
     4621 aggcggagct gccgcacgat ctcggggatg gcttcgaggt tggtgaggta gacggtttct
     4681 tccagatcct tcttgcccac gaacttgccc gtgttcacgt ccacgctgac gagggcttcc
     4741 gtctggttca gcacgatgga gccgccgtgc ttgaggaaca ccttgggctg gcgggcggcg
     4801 tcgatctcag cctcgatgcc gaaggcctcg aagatgggca ggtccgaggt gaagtgcttc
     4861 acccggttgg cccattcggg atgcagcttc tccacgaagg cgagcacctc ctggtgggcg
     4921 gtgctgtcat ccacccagaa ggtggagact tcttcgcgga agatgtcgcg catgactttc
     4981 tggaggaggc gcagatcctg ccacaccagc cctggcgcgg gtacgacctc cgccttggcg
     5041 cggatctcct gccacatctg gcgcaggaag atcacgtcgc cgatcaggtc ctcatccttt
     5101 tcgccgatgg ccgccgtgcg gacgatgaac ccctcaccgg gctggacgtg gctgcggatc
     5161 agctctcgga ggcgctcccg ttcctcgggg tcggtgatct tgcgggagat gccgatgtgg
     5221 tcgatgccgg gcatgaagac caggaaacgg cccgggaagc tcaggtgccg ggacagccgg
     5281 ggacctttgg aaccgatggg gtctttgacc acctgaacga gggtctcctc cccttccttg
     5341 agggggggga ggg
//
LOCUS       DATGWW010000060         3563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_411802, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000060 DATGWW010000000
VERSION     DATGWW010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3563
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411802"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..635
                     /locus_tag="VK150_00810"
     CDS             <1..635
                     /locus_tag="VK150_00810"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HLP29867.1"
                     /translation="AVVITGAGEKAFVAGADIAELKSLDTASARVQALRGQAVFQRIE
                     SMPKPVIAAVNGFALGGGCELALACHIRVASENARFGLPEVSLGIIPGYGGTQRLPRL
                     VGKGVALDMILSGEMTPAADALRMGLVSRVVPQAELKATAEKLAKTILSRGPLALRSA
                     LAAVNEGIEMPQDQGLQYEAALFGLLAATTDMQEGMGAFLEKRAAQFKGL"
     gene            complement(700..2817)
                     /locus_tag="VK150_00815"
     CDS             complement(700..2817)
                     /locus_tag="VK150_00815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29868.1"
                     /translation="MRWFSLVLSAALGVTALADQPTATFSSFNDWLGSETRGVRIGAD
                     GRLRLAPNLRRVGQLPEGVIWAAVPDGSGGAYLSAGTDGKLFHYVAGQMKPLAQVKGG
                     IVFAMARLGQDLVVAPTGEGKLFRVTPGGDVKPFADIDARIVWALATEGDAVLVAGGS
                     EKGAALVQAREGSSRRLAELSDETAFTAMVSDGQGGWYLGSHGRGLVLRYSRQGDRLE
                     TLMDTPFEEVRALAVADGQLYIGADNGLTPKFATGQLERREGYLQAETATAARSAVLR
                     MDKERVPEVLWQSAQSQVYALTAWKGQLLVATGNRSRIFSLPLGKGRDADSFAPFAVV
                     QELGTAQATAFLPSGGDLLVVGSNPAELHLLSEAQATEGTLESRILKGAPIADWGRAY
                     LDAETPTGTSVELQFRTGSTEAPDATWSAWTPPLRSGERPALPPSRFAQFRLRLGSTR
                     GGASPIVETVSLHWAHRNLSPVWEGVDLMPPGLVITRNAPPDDIGIERVPLETQKLIP
                     ALGYMGAEKRSFRRGGQSFVFRVNDPNGDALRFSISLVPDRGAPIPLEKDWKEKFFSF
                     DTLPVPDGRYRLEVVASDAPTAAFNTALTSTWRTAPFLVDHTPPTITDLSAAQEGDSL
                     RVRFLARDETGMLKEAAVSADGERWLQIVPEDRVFDQKEERFDVLVPRDAVRGSRVLV
                     RVVDQHNNEQTAAVTIGAVPAKR"
     gene            complement(2844..>3563)
                     /locus_tag="VK150_00820"
     CDS             complement(2844..>3563)
                     /locus_tag="VK150_00820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29869.1"
                     /translation="VAQTLDAHVRGLGLQSLSMQGNIKLAGHPAIQIENVIADLNASR
                     MAQYVGAMLQGICLNPFEKPVFEGISLTIKAEERLDLTGIVGVRLLKARAKRGEVLPV
                     LVTLQNIQGVRETATFNIQVPSSAAKGKAILMVGDGFSLTAADPDERVIEVASLGDVV
                     RILNGALRNNHAYALLVQAQAGAGLRGSRIEGIPPTVASLVGGDGASSDNRLQRRIVG
                     RAVLPLEREVRGLSQLEVEIE"
BASE COUNT          506 a         1254 c         1272 g          531 t
ORIGIN      
        1 gcgcggtggt catcaccggc gcgggcgaga aggccttcgt ggcgggcgcc gacatcgcgg
       61 agctgaagag cctcgacacg gcctccgccc gggtgcaggc cctgcgtggc caggcggtct
      121 tccagcgcat tgaatccatg cccaagcccg tgatcgccgc cgtgaacggc ttcgccctgg
      181 gcggtggctg cgagctggcc ctggcctgcc acatccgcgt cgccagcgag aacgcccgct
      241 tcggcttgcc ggaagtgagc ctcggcatca tccccggcta cggcggcacc cagcgcctgc
      301 cccgcctggt gggcaagggc gtggccctgg acatgatcct cagcggcgag atgacccccg
      361 cggccgatgc cctgcgcatg ggcctcgtga gccgcgtggt gccccaggcc gagctgaagg
      421 ccaccgccga gaagctggcg aagaccatcc tctcccgcgg gcccctggcc ctgcgcagtg
      481 ccctggccgc ggtgaacgaa ggcatcgaga tgccccagga ccagggcctg cagtacgagg
      541 ccgcgctctt cggcctgctg gcggccacca ccgacatgca ggagggcatg ggcgccttcc
      601 tggagaagcg cgcggcgcag ttcaaagggc tgtaggccat ccctcagcag aagggcgcgg
      661 tccgcggacc gcgcccttct gcgtgttcgc cagcgggagc tagcgcttgg cgggaacggc
      721 cccgatggtg accgctgcgg tctgctcgtt gttgtgctgg tccaccaccc gcacgaggac
      781 gcggctgccg cggacggcat cccggggcac cagcacgtcg aagcgctcct ccttctggtc
      841 gaagacccgg tcctccggca cgatctggag ccagcgctca ccatcggcgc tgacggcggc
      901 ctccttcaac atgccggtct cgtcccgggc caggaaccgc acccggaggc tgtctccttc
      961 ctgggccgcg ctcaagtcag tgatggtggg cggggtgtgg tccaccagga agggcgccgt
     1021 gcgccaggtg ctggtgaggg ccgtgttgaa ggccgccgtg ggggcgtccg aggccaccac
     1081 ctccagccgg taccgcccat cgggcacggg cagggtgtcg aagctgaaaa acttctcctt
     1141 ccagtccttc tccagaggaa tgggcgcgcc ccggtcgggc accagcgaga tggagaagcg
     1201 gagggcgtcg ccgttcggat cgttcacgcg gaacacgaag ctctggccgc cccggcggaa
     1261 gctgcgcttc tcggcgccca tgtagcccag ggccgggatg agcttctgcg tctccagcgg
     1321 cacgcgctcg atgccgatgt catcgggcgg cgcgttgcgg gtgatgacga gacctggcgg
     1381 catgaggtcc acgccttccc agacggggct gaggttgcgg tgggcccagt gcaggctcac
     1441 ggtctccacg atgggcgagg cgccgccccg ggtgctgccc aggcggagcc ggaactgggc
     1501 gaaccgggaa ggcggaaggg cgggccgctc gccgctgcgg agcgggggcg tccaggcgct
     1561 ccaggtggcg tccggcgcct cggtgctgcc cgtgcggaac tgcagctcca cgctggtgcc
     1621 cgtgggcgtc tccgcatcca ggtaggcccg gccccagtcg gcgatgggcg cgcccttgag
     1681 gatgcgcgac tccagggtgc cttccgtggc ctgcgcctcg gacagcaggt gcagttcagc
     1741 cggattcgag cccaccacca gcaggtcgcc gcccgagggc aggaaggcgg tggcctgggc
     1801 cgtgcccagt tcctgcacca cggcgaaggg cgcgaaggaa tcggcgtcgc gccccttccc
     1861 cagcggcagg gagaagatcc gcgaccggtt gcccgtggcc accagcagct gccccttcca
     1921 ggcggtcagg gcgtagacct ggctctgggc gctctgccag aggacttccg gaacccgctc
     1981 cttgtccatc cggagcacgg cggagcgggc ggcggtggcg gtctcggcct ggaggtagcc
     2041 ctcgcggcgt tccagctgac ccgtggcgaa cttgggcgtg aggccgttgt cggcgccgat
     2101 gtagagctgg ccgtcggcca cggccagggc gcgcacctcc tcgaagggcg tgtccatcag
     2161 agtctccagg cggtcgccct ggcggctgta gcggagcacc aggcctcggc catggctgcc
     2221 caggtaccag cccccctgcc cgtccgagac catcgccgtg aaggccgtct cgtccgacag
     2281 ttccgccagg cggcggctgc tgccttcccg ggcctgcacc agcgcggccc ccttttcgga
     2341 gccgccggcc acgaggacgg catcgccttc cgtggcaagg gcccagacga tgcgggcatc
     2401 gatgtcggcg aagggtttca cgtctccgcc aggcgtgacg cggaagagct tgccctcgcc
     2461 ggtcggcgcc accaccaggt cctggccaag gcgcgccatg gcgaagacga tgccgccctt
     2521 cacctgggcc aggggcttca tctgccccgc gacgtagtgg aacagctttc cgtcggtgcc
     2581 tgcggacagg taggcgccgc cggagccatc tggcaccgcc gcccagatca cgccctcggg
     2641 cagctggccc acgcgtcgca ggttgggcgc caggcgcagg cggccgtccg ccccgatgcg
     2701 cacgccccgg gtctccgagc ccagccagtc attgaagctg gaaaaggtgg cggtgggctg
     2761 gtccgccagg gcggtcacgc ccagtgcggc ggaaagaacg agactgaacc aacgcataga
     2821 ttcccttcct cgtgaacgca tcgctactcg atctccactt ccagctggct gaggccccgc
     2881 acttcccgtt ccaggggcag cacggcccgg cccacgatcc gccgctgcag ccggttgtcg
     2941 ctgctcgccc cgtcgccgcc caccaggctg gccacggtgg gcggaatgcc ttcgatgcgg
     3001 ctcccgcgca ggcccgcgcc cgcctgggcc tgcaccagca gggcgtaggc gtggttgttc
     3061 cggagggccc cgttcaggat gcggaccacg tcgcccaggc tggcgacctc gatcacgcgc
     3121 tcatcaggat ccgccgccgt gaggctgaac ccgtcgccca ccatgaggat ggccttgccc
     3181 ttggcggcgg aggaaggcac ctggatgttg aaggtggccg tctcccgaac gccctggatg
     3241 ttctggaggg tcaccagcac cggcagcact tcgccgcgct tggcccgggc cttcaggagg
     3301 cgcaccccca cgatgcccgt gaggtccagg cgctcctcgg ccttgatggt cagcgagatg
     3361 ccctcgaaga cgggcttttc gaaggggttc aggcagatgc cctggagcat ggcgcccaca
     3421 tactgggcca tgcgggaggc gttcaggtcc gcgatgacgt tctcgatctg gatggcgggg
     3481 tggccggcca gcttgatgtt gccctgcatg gagaggctct ggaggccaag gccgcgcaca
     3541 tgggcgtcca gggtctgggc cac
//
LOCUS       DATGWW010000061         2831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_230775, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000061 DATGWW010000000
VERSION     DATGWW010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2831
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230775"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            128..1339
                     /locus_tag="VK150_00825"
     CDS             128..1339
                     /locus_tag="VK150_00825"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HLP29870.1"
                     /translation="MSFNTLYNTPDRQRFWAPTRLHAGLGSRELACDLLAPDRPTVLV
                     VDAHFAEHPFVEALTRHVGAWTLQVVNQGEPYTTAAEEAVHGLEGRAWNQLLALGGGS
                     TLDLAKALLAHRTFGAFRQVGYGALRDLPDLWPVETGCPFVAIPTTAGTGSETSRYYL
                     LSDPASGKKLVSRSWTLCPSAALLDPFFLQEMPERLVVQGAFDAFTHLWETHFCAQEG
                     SAQVRALAQEGMAAILGSMLDLERTGTLDDRARAGLQLASAWGGMALSNVRTGFLHTA
                     GEALAAQVSLPHPLTLWAFFRTNMRMFQNVYDIQGRTLFHLLAPVLACRPEETLTSLQ
                     GVWERAFRRTGAEGHLRGAFRRNPPLLAPILDIVCADRVLLTKEAPRPLLEAEVRSAI
                     EEVMADWSAPA"
     gene            complement(1311..2624)
                     /gene="rfbH"
                     /locus_tag="VK150_00830"
     CDS             complement(1311..2624)
                     /gene="rfbH"
                     /locus_tag="VK150_00830"
                     /inference="COORDINATES: protein motif:HMM:NF011936.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein RfbH"
                     /protein_id="HLP29871.1"
                     /translation="MSAEALKAQILDLVAEYYRAHWPERPFTPGESPVPVSGKVFDAR
                     DLQHVVEAGLDFWLTTGRFANAFEARFAAFMEQEHCLLVNSGSSANLLALTALTAPEL
                     GDRRLRPGDEVITCATGFPTTVNPILQNQLVPVFLDVHVPTYNMDVSRLEEAVGPRTK
                     AIMVAHTLGNPFDLDAVMTVARKHGLWVVEDCCDAVGARYKGRMVGTFGDLATTSFYP
                     AHHITMGEGGAVLTSSPKLKKLVESYRDWGRDCWCEPGRDNTCGKRFDWQLGGLPHGY
                     DHKYTYSRLGYNLKATDLQAAVGLSQLDKLPGFLASRKANHQHLLDRLKPLEGWLQLP
                     EATSESEPSWFGFPITVRDASPVRRNALVQSLNEARIGTRLLFGGNLLRQPAYAGIPH
                     RKVGDLHQADRVMNDTFWVGVFPGLTGPMLDHVVEVLRQALTSRP"
BASE COUNT          413 a          958 c          992 g          468 t
ORIGIN      
        1 gccccttcga cctgtgggac cttcccctcc tggtgcatcg ctggcagccg ggataccggt
       61 tccacctgcg aacccacgac gaggaggggc tggagatcgt cgcctacgcc acgacagggg
      121 tttgagcatg tccttcaaca ccctctacaa caccccggac cgccagcgtt tctgggcccc
      181 cacgcggctc cacgcggggc tcggatcgcg ggagctcgcc tgcgacctgc tggccccgga
      241 ccgtcccacc gtcctggtgg tggacgccca cttcgccgag catcccttcg tggaggccct
      301 gacccggcat gtcggcgcct ggaccctcca ggtggtgaac cagggggagc cctatacgac
      361 cgccgcggag gaggccgtcc atgggcttga ggggcgggcg tggaaccagc tcctggccct
      421 gggcggcggc agcaccctgg acctggccaa ggccctgctc gcgcatcgga ccttcggtgc
      481 gttcagacag gtcggctacg gcgccctgcg cgacctgccg gacctctggc ccgtggaaac
      541 ggggtgcccc ttcgtggcga ttcccaccac cgccggaacg ggctcggaaa cgagccggta
      601 ctacctgctc tcggatcccg cctcgggcaa gaagctggtg tcccggtcct ggaccttgtg
      661 cccttcggca gccctgctgg atccgttctt cttgcaggag atgcccgaac ggctcgtggt
      721 tcaaggcgcc tttgacgcct tcacgcacct ctgggagacc cacttctgcg cccaggaggg
      781 atcggcgcag gtgcgggccc tggctcagga ggggatggcc gcgatcctgg gcagcatgct
      841 ggatctggag cggacgggaa ccctggatga ccgcgcacgc gccggcctgc agctggcctc
      901 ggcctgggga ggcatggccc tctcgaatgt ccgcacgggc ttcctgcaca ccgccggaga
      961 ggccctcgcg gcgcaggtga gcctgcctca tcccctcacg ctgtgggcct tcttccggac
     1021 gaacatgcgg atgttccaga acgtctacga catccaggga aggaccctct tccatttgct
     1081 ggcgccggtg ctggcctgcc gacccgagga gacgctcaca tctcttcaag gcgtgtggga
     1141 gcgggccttc cgtcgcacgg gcgcagaagg gcacctgcgg ggggccttcc ggcggaaccc
     1201 gcccctcctc gcgccgatcc tcgacatcgt gtgcgcggac cgggtgctgc tcaccaagga
     1261 ggcgcccagg ccgctcctgg aggccgaggt gcgttcggcc atcgaggagg tcatggccga
     1321 ctggtcagcg cctgcctgag gacttcgacg acgtgatcga gcatggggcc cgtcagcccc
     1381 gggaacacgc ccacccagaa ggtatcgttc atgactcggt ccgcctggtg gaggtcgccg
     1441 accttccggt gggggatgcc cgcgtaggcg ggctggcgca gcaggttccc cccgaacagg
     1501 aggcgggtgc cgatgcgggc ctcgttcagc gactggacca gcgcgttgcg gcgtacgggt
     1561 gacgcatcac gcacggtgat cggaaacccg aaccagctcg gttcggattc cgacgtggct
     1621 tccggaagct gaagccagcc ctccagcggc ttaaggcggt ccaggaggtg ctggtggttg
     1681 gcttttcggg atgccaggaa cccgggcagc ttgtccagct gcgacaggcc cacggcggcc
     1741 tgcaggtccg tggccttgag gttgtacccg aggcggctgt aggtgtactt gtggtcgtag
     1801 ccgtggggca gcccccccag ctgccagtcg aaccgcttgc cgcaggtgtt gtcgcggcca
     1861 ggttcgcacc agcagtcccg gccccagtcc cggtagctct ccaccagctt cttcagtttc
     1921 ggggagctgg tgagcacggc gccgccctcg cccatggtga tgtggtgggc ggggtagaag
     1981 ctggtcgtgg cgaggtcgcc gaaggtgccc accatccggc ctttgtaccg ggcgcccacg
     2041 gcgtcgcagc agtcctccac cacccacagg ccgtgcttgc gggccacggt catcacggcg
     2101 tcgaggtcga aggggttgcc cagggtgtgg gccaccatga tggccttggt gcgtgggccg
     2161 accgcctcct ccaggcggct cacgtccatg ttgtaggtgg ggacatggac atcgaggaag
     2221 accggcacca gctggttctg gaggatgggg ttgaccgtgg tggggaatcc cgtggcgcag
     2281 gtgatgacct cgtcgccggg ccgcaggcgc cggtcgccga gctcgggggc ggtgagcgcg
     2341 gtcagggcca gcaggttggc gctggagccg gagttcacca ggaggcaatg ctcctgttcc
     2401 atgaaggccg cgaagcgcgc ttcgaaggcg ttcgcgaagc ggccggtggt gagccagaaa
     2461 tccaggcccg cctccaccac gtgctggagg tcgcgggcat cgaagacctt cccgctcacg
     2521 ggcacggggc tctctcccgg ggtgaaggga cgctccggcc agtgggcccg gtagtactcc
     2581 gccaccaggt cgaggatctg cgccttcagg gcctctgcgc tcatcgcccc gtccccagtg
     2641 cgtgccgggc catgacgccg ttcatggtgc acctccgcgg atggtcggga aagtatcgca
     2701 cggggtcgcc gcagcccacg ccgccccccc gattcagatt cagccggatc cggccgatga
     2761 gaggagagga gtctgacgat gagctcgccc caacacccgc tcgaaggctg tcgtggtcag
     2821 ggctgcggcc c
//
LOCUS       DATGWW010000062         1765 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_138152, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000062 DATGWW010000000
VERSION     DATGWW010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138152"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            337..930
                     /locus_tag="VK150_00835"
     CDS             337..930
                     /locus_tag="VK150_00835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29872.1"
                     /translation="MAEVHARAAEELRAEALRREQVERELLALRMEVEAMRSSEAERS
                     EARRDRSTPRPSDTEATSTMATIAEFVRVVQGASEVVRGASEVARDASEVAKGATEAR
                     VASGEPGTSREVRGYSGALWSKLAARAELTKLGRQKRPSFMTFLDWRRRVERWARMAG
                     GGEMTMDSLTPRDIADAAWHILDPALLEELRARRRLE"
BASE COUNT          277 a          564 c          646 g          278 t
ORIGIN      
        1 tgttgcggcg cgagttggac gatgttcacg cccggatggc cgaggtccgc gccagggctg
       61 caggggagct gcgagctgag gcattgcgcc aggagcaggt ggagcgcgag ctcccctggt
      121 gctatacaac ctcccgctac cgcaccctcc cccactgcac ctgcatcccc ccctgatgca
      181 cccccgcctc gccatgggtc ccctgccgga aggcggggcc catccactga gaccccgccg
      241 acatcccaca cccctccgcc ggctgcccct gcatccttgt ctggtgcgga tgacgtccgc
      301 atgttgcggc gcgagttgga cgatgttgac gctcggatgg ccgaggtcca cgccagggct
      361 gcagaggagc tgcgagctga ggccttgcgc cgggagcagg tggagcgcga gctccttgct
      421 ctccgtatgg aggttgaggc catgaggtcc agcgaggcag agaggagtga ggcgcggcgg
      481 gaccggtcta caccgcggcc gagtgacacc gaggcgactt ccaccatggc gaccattgcg
      541 gagtttgtgc gtgtggtgca gggggcctcg gaggtagtca ggggggcatc agaggtggcc
      601 agggacgcct ctgaggtggc caagggggct actgaggccc gggttgcgtc tggtgagcct
      661 gggacatcgc gggaggtgcg aggctacagc ggagcgctgt ggtccaaatt ggcggcgcgc
      721 gcggagctca ccaagctcgg gcgccagaag cggccatcct ttatgacctt tttggactgg
      781 cggcgccgcg ttgagaggtg ggcccggatg gcaggtggcg gggagatgac catggacagt
      841 ttgaccccgc gggacatagc ggacgccgcg tggcacatcc tggaccctgc tctgctggag
      901 gagcttaggg ccaggaggag gttggagtag ccctgggagc ggctgctcct gtacatccgt
      961 gaggcgctgg gccttactag ggcggacctg aaggctgccc tacatgagga ggggcaggcc
     1021 agcggggagg aggttgagga ctacgccgcc cggtttgagg ccgtcagagt ggaggtgggc
     1081 atgatgcagg aggaggcaaa ggacatcctg atccgcgggt tgtctgatgc cggcctcgca
     1141 gccctcaacc ggcgggtgga cagcaccaag acccgcgtcc caggtgacag gacgccggcc
     1201 cccgtggacg aggtcaccgc caggattaat tattacgaga tcttggatct gctgagtata
     1261 ggggaggcct tccggcgacc ccagaggcgg cagcacccgg cggttcacct cctggcgccc
     1321 gcagaccggc ccctgcccac catcaccgag gagccgtccc cctggggtgt gctgggcagc
     1381 tccactaccc atggggccta ttacgtgtcc cccgctgtcc ccagcatcgc gaccgcggac
     1441 cccgagcctg ccgcggctgc ttccgtcgct cgcttggagc gcagcctccc tgccgctgtc
     1501 cgggcggagg gagtgtgggc gtctcagcac gggggggagc acccagtctt ccaggacccc
     1561 atagctgcct tgggggcata tggagtcctc ctgggagcag cccgccaggc ggcccccggc
     1621 gaccgcgagc ggatcgcggc gattgacgcc attgagcagg atttggtgga ccgcgtcatc
     1681 gccctggcgg aggagcaccc ccaggtccgc cagctggcct tggacctggt cccctggcag
     1741 tccaggcgcc gcggggacag ccagc
//
LOCUS       DATGWW010000063         2433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_5321, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000063 DATGWW010000000
VERSION     DATGWW010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2433
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5321"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..782
                     /gene="ccsA"
                     /locus_tag="VK150_00840"
     CDS             <1..782
                     /gene="ccsA"
                     /locus_tag="VK150_00840"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HLP29873.1"
                     /translation="AILYLAAGALLSWRLAQGLNASPATRTLALALWFAALAIHLPSL
                     YGDIVTPLGLNLAFFNVLSLVTDVIALILLFTSLVRPVANLGVLILPLAAVAAVLRAV
                     LPVTTNHVAYADPGLQAHILLSILAYSLFSIAAVQAVLLAIQNHHLRHRHPGGFIRAL
                     PPLETMEQLLFQMIAIGYGFLTLSLVTGALNLQNVFAQHLVHKTVLSLFAWVLFSVLL
                     WGRHHFGWRGRTAIRWTMGGFVLLMLAYFGSKFVLELILKR"
     gene            856..2112
                     /locus_tag="VK150_00845"
     CDS             856..2112
                     /locus_tag="VK150_00845"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HLP29874.1"
                     /translation="MLFILLAAFFAGSETGLFSLNRYRLKHLARHHAGAQRAQELLAR
                     PDRLIGILLLGNTFVNIAASSLATVIALRLWGDAGVAIAAGVLTLLLLIFGEVTPKTI
                     AALYPERVAFAVSHLLWVLLRVLAPLVRAINGITNGLLRLFGISPDKVAHHALSGEEL
                     RTVVHEAGAVISAPHQRMLLSILDLEKATVEEIMVPRNEVVGIDLDEPWAQVLDQLTA
                     TQHTWLPVYQGDIDHVLGFVHMRHFLALQHYGIPGKEEFRGIIREAYFIPEGTPLHTQ
                     LLNFQQQRRRIGLVVDEYGEILGLVTLEDILEEIVGEFTTDPAQNVREVHPQPDGTLL
                     VDCTITIRELNRAMGWQLPTEGPRTLNGMITEYLETLPQPGTSFLLGGHPIEVIQTGA
                     NAVKTVRIDPARRVEPSARRQRAGGM"
     gene            2211..>2433
                     /locus_tag="VK150_00850"
     CDS             2211..>2433
                     /locus_tag="VK150_00850"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HLP29875.1"
                     /translation="MSTLTLSFKGMNLKTLTLAEGEMVIGSDPGCAIHIDSLAVQPRH
                     AAVVTKGSASTLRDLGSPDGTFVNNEKLTG"
BASE COUNT          386 a          892 c          726 g          429 t
ORIGIN      
        1 ccgcgatcct ctatctcgcc gccggagccc tgctctcctg gcgcctggcc cagggcctga
       61 acgcgagtcc cgccacccga acgctggctc tcgccctctg gttcgcggcg ctggcaatcc
      121 atctgcccag cctctacggc gacatcgtca cgccgctggg tctcaacctg gccttcttca
      181 acgtcttgtc cctggtgacg gacgtgatcg ccctgatcct gctcttcacc tccctggtcc
      241 ggccggtggc gaacctgggc gtgctgatcc tgccgctggc ggcggtcgcc gccgtcctgc
      301 gcgccgtgct cccggtcacg accaaccacg tcgcctacgc ggacccggga ctgcaggccc
      361 acatcctgct ctccatcctg gcctacagcc tgttcagcat cgcagcggtg caggcggtgt
      421 tgctggccat ccagaaccac catctgcgcc accgccaccc ggggggattc atccgcgccc
      481 ttcctccctt ggagaccatg gaacagctct tgttccagat gattgccatc ggctacgggt
      541 ttctgaccct ctccctcgtc accggcgcac tcaacctgca gaacgtcttc gcccagcatc
      601 tggtgcacaa gacggtactc tccctcttcg cctgggtcct cttctcggtg ctgctgtggg
      661 gccgccacca cttcggctgg cgcggtcgca ccgccatccg ctggaccatg ggcggtttcg
      721 tgctgctgat gctcgcctac ttcggcagca agttcgtgct ggaactgatc ctcaagcgct
      781 gaaccgcgac gcccacggaa aggtcggtcc cccttgtttg aagatatccc gctgagcgcc
      841 ctgattgggg ccctggtgct gttcatcctg ctggccgctt tctttgccgg cagcgagacg
      901 ggccttttca gcctcaaccg ctaccggctg aagcacctcg cccgccacca cgcgggcgcc
      961 cagcgcgcgc aggaactgct ggcccgcccc gaccggctca tcggcatcct gctgctcggc
     1021 aacaccttcg tgaacatcgc ggcctcctcc ctggccaccg tcatcgccct gcgcctgtgg
     1081 ggcgacgcag gcgtggccat tgcggcgggc gtgctgacgc tgttgctgct catcttcggc
     1141 gaggtgaccc ccaagaccat cgcggcgctc tatccggagc gggtcgcctt cgcggtcagc
     1201 cacctgctct gggtgctgct gcgggtgctc gccccgctgg ttcgcgccat caacgggatc
     1261 accaacggac tgctcaggct gttcggcatc tcgccggaca aggtggcgca ccacgccctc
     1321 agcggcgagg aactgcggac cgtggtgcac gaggcgggcg ccgtcatctc ggccccccac
     1381 cagcgcatgc tgctctccat cctcgacctg gagaaggcga cggtggagga gatcatggtc
     1441 ccccgcaacg aggtggtggg catcgatctg gacgagccct gggcgcaggt cctggaccag
     1501 ctcacggcga cccagcacac ctggctgccc gtctaccagg gggacatcga ccacgtcctc
     1561 ggcttcgtcc acatgcgcca cttcctcgcc ctgcagcact acggcatccc cggcaaggag
     1621 gagttccgcg gcatcattcg cgaggcctac ttcatccccg aggggacgcc gctccacacc
     1681 cagctgctca atttccagca gcaacggcgc cgcatcgggc tggtggtgga tgagtacggg
     1741 gagatcctcg ggctggtgac gctggaggac atactcgagg agattgtcgg cgagttcacc
     1801 accgatcccg cgcagaacgt gcgggaagtg cacccccagc cggacggcac cctgctggtg
     1861 gactgcacca tcaccatccg tgaactgaac cgcgccatgg gctggcaact gcccacggag
     1921 ggaccccgga ccctgaacgg aatgatcacc gaatatctgg agacccttcc ccagcccggg
     1981 accagtttcc tgctgggcgg ccatcccatc gaggtgatcc agaccggggc caacgcggtg
     2041 aagaccgtcc gcatcgaccc cgcccgtcgg gtggaaccga gcgcccgtcg ccaacgtgcg
     2101 ggcggaatgt gatcgggacc ccacggcccg cctcccggtg ctgtacatcg gatgccgggc
     2161 aaggcatata atctcttgtc aaatcactaa aaaagcgcag agaggaccgg ttgtcgacgc
     2221 tgacgctctc cttcaagggg atgaacctga agaccttgac cctcgccgag ggcgaaatgg
     2281 tcatcgggag tgatcccggc tgcgccatcc acatcgacag cctcgcggtc cagccgcgcc
     2341 atgccgcggt ggtgaccaaa ggcagcgcca gcaccctgcg cgacctgggc tcccctgacg
     2401 gcaccttcgt caacaacgag aagctcaccg gcg
//
LOCUS       DATGWW010000064         3145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_138340, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000064 DATGWW010000000
VERSION     DATGWW010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3145
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138340"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..1314)
                     /locus_tag="VK150_00855"
     CDS             complement(199..1314)
                     /locus_tag="VK150_00855"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HLP29876.1"
                     /translation="MRQLWIGIGLLILLACGGGGSASAPAPAPDPWAATTTAIQAAQA
                     QFPGGLCVEIATPAGVVYSRSFGGFTNQDAVLVASASKWVTSTVILRLVDAGAFPHGL
                     DTQAKDLLVDSNGLPWSGNMGDITLRQLLSFTSGISGDNDASENVLITLDVAVKRIYA
                     DAAATASAPGSTFYYGSTHMRIAARMAERATQKTWAQLFAEQFRDPFGWSATSIFSGG
                     GPNPNPAGGLKCTGQEYMRFLMMQLRGGQDGSGTFLSPAMVAAQHADGYGPATTLVYS
                     PYVAMTGKPYHYALGHWLETAGGGGPTAADPVIRYSSTGTFGWAPWITGDGAYGGIIM
                     TLQAQGNTLPSENLKAQLDPLVRAALAQHPPVIRAVP"
     gene            complement(1369..2697)
                     /locus_tag="VK150_00860"
     CDS             complement(1369..2697)
                     /locus_tag="VK150_00860"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:TIGR01358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HLP29877.1"
                     /translation="MTPWNPHSWQRFPAQQQPAYDDPSELEGVLARLRRLPPLVVPEE
                     VTRLRQLLAEAAAGRRFLLQGGDCAEQFKDCTPEAIEGKLRVLLQMSVALTHGGRKPV
                     VRVGRIAGQFAKPRSKPTEQVRGRDLPSYRGDLVNGLEATEASRRPDPGRMADAYFHA
                     SATLNHLRALTAGGFADLHHPERWELPGGTGDVPAYRRTLDQVRESLDFLEALGGVQR
                     DVLERIDFFTSHEALLLPYEEALTRWIAEDASYYNLGAHTLWVGERTRQLDGAHIEYL
                     RGIRNPLGVKVGPSATPDHLAALLDRLDPGREPGRITLISRFGAAKIQDALPPLLKAV
                     QATDHPVLWSCDPMHGNGTESASGLKTRAFSAILSELRQAFEIHRAHGSHLGGVHIEL
                     TGEAVTECTGGTEGLSEADLAKAYETGCDPRLNGTQSLEMAFLIAEMMRG"
     gene            complement(2736..>3145)
                     /locus_tag="VK150_00865"
     CDS             complement(2736..>3145)
                     /locus_tag="VK150_00865"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLP29878.1"
                     /translation="DDYLVKPFSVLELMARVKAILRRTRPVDRPALLRSGPFRFDLPR
                     LEARREGRLLELTPREFRLLEILITHPGRTHSRKELLQLAWEPDARPSARTVDVHIAN
                     LRRKLGEEWTAPWIATVGGEGYRWVTPVETETA"
BASE COUNT          416 a         1022 c         1234 g          473 t
ORIGIN      
        1 tgggagggcc tggccctgcc ggccctgcac cctggcgagg tactgctgct gcctccgccc
       61 cggctcaggc ccctgccggg gctgggcggg gacgcggagg ttcggcttgg cgcggatttc
      121 gaccagctgg tcctgcgcct cggcccggag gaggttcatc ctaccgtgca gtgaggcatg
      181 tcctgagggc gcggaaggtc aaggcacggc gcggatcacc ggcgggtgct gggccagcgc
      241 ggcgcggacg aggggatcga gctgcgcctt gaggttttcg gagggcaggg tgttgccctg
      301 ggcctgcagc gtcatgatga ttccaccgta ggcgccgtcg cccgtgatcc acggggccca
      361 gccgaaggtg cccgtgctgg agtaccggat caccgggtcc gccgccgtgg gaccgccgcc
      421 gccggcggtc tcgagccagt ggcccagggc gtagtggtag ggcttcccgg tcatggccac
      481 gtacgggctg tagaccaggg tggtggcggg gccgtagccg tccgcgtgct gtgcggcgac
      541 catcgcgggg gagaggaagg tcccggatcc gtcctggccg ccccgcagct gcatcatcag
      601 gaaccgcatg tactcctgcc cggtgcactt cagcccgccg gcggggttgg ggttggggcc
      661 gccgccgctg aagatgctgg tggcggacca gccgaagggg tcgcggaact gctcggcgaa
      721 gagctgggcc caggtcttct gagtggcccg ctccgccatg cgggccgcga tgcgcatgtg
      781 ggtgctgccg tagtagaagg tgctgcccgg ggccgaggcc gtggccgccg cgtcggcgta
      841 gatccgcttc acggccacgt cgagggtgat gagcacgttc tcggaggcat cgttgtcgcc
      901 gctgatgccg gaggtgaagc tgagcagctg gcggagggtg atgtcgccca tgttgccgga
      961 ccaggggagg ccattcgaat ccaccagcag gtccttcgcc tgggtgtcca ggccgtgggg
     1021 gaaagccccc gcatccacca ggcggaggat gaccgtgctc gtgacccact tcgaggccga
     1081 cgccaccagc actgcgtcct ggttggtgaa gcctccgaag ctgcgggagt acacgacgcc
     1141 cgccggggtg gcgatctcca cgcagagccc gcccgggaac tgggcctggg ccgcctggat
     1201 ggcggtggtg gtggccgccc agggatcggg ggcgggcgcc ggagcggagg cgctgccccc
     1261 tccgccgcag gccaggagga tcagcagtcc gattccaatc cacagctgtc gcacgtgacc
     1321 tccgaatgaa ccaccgaccc ggggagaggc ccggcggttg aggccggatc agccccgcat
     1381 catctcggcg atgaggaagg ccatctccag gctctgggtg ccgttgaggc ggggatcgca
     1441 gccggtttcg taggctttcg ccagatccgc ctcggacagc ccctcggtgc cgccggtgca
     1501 ctcggtgacg gcttcgcccg tgagctcgat gtggacgccg cccaggtggg aaccgtgggc
     1561 gcggtggatc tcgaaggcct ggcgcagctc cgagaggatg gcgctgaagg cccgggtttt
     1621 caggccggac gcgctttccg tgccgttgcc gtgcatggga tcgcagctcc agagcacggg
     1681 atggtccgtg gcctggaccg ccttcagcag cgggggcagc gcgtcctgga tcttcgcggc
     1741 gccgaaccgg gagatgaggg tgatgcggcc gggctcgcgc ccgggatcca ggcggtccag
     1801 cagggccgcg aggtggtcgg gcgtggcgct ggggcccacc ttcacgccga gggggttgcg
     1861 gatgccgcgg aggtactcga tgtgggcgcc gtccagctgc cgggtgcgct cgcccaccca
     1921 gagggtgtgg gcgcccaggt tgtagtagct ggcgtcctcg gcgatccagc gggtgagggc
     1981 ctcttcgtag ggcaggagca gggcctcgtg gctggtgaag aaatcaatgc gctcgagcac
     2041 gtcccgctgc acgccgccca gggcttccag gaaatccagc gattcgcgca cctggtcgag
     2101 ggtgcggcgg taggcgggca cgtcgccggt gccgccgggc agctcccagc gctcggggtg
     2161 gtgcaggtcc gcgaagccgc cggccgtgag ggcccgcagg tggttcaggg ttgcggaggc
     2221 gtggaagtag gcgtcggcca tgcgccccgg atcggggcgg cggctggcct cggtggcctc
     2281 cagcccgttg acgagatcgc cccggtagct gggcaggtcg cggccgcgga cctgctcggt
     2341 gggcttgctg cgcggcttgg cgaactggcc ggcgatgcgg cccacgcgca ccacgggctt
     2401 gcggcccccg tgagtgaggg ccacggacat ctggagcagc acgcggagct tgccctcgat
     2461 ggcctcgggc gtgcagtcct tgaactgctc ggcgcagtcg ccaccctgca gcaggaagcg
     2521 ccggccggcc gcggcttccg ccagcagctg ccggagccgc gtgacctcct cgggaaccac
     2581 cagcggcggc aggcggcgga ggcgcgccag gacgccctcc agctccgagg gatcgtcgta
     2641 cgccggctgc tgttgggccg gaaagcgctg ccagctgtgg ggattccagg gcgtcatgtc
     2701 ccattctggc ccggaacggc cttctgagat acgccctagg cggtctcggt ctccacgggc
     2761 gtgacccagc ggtagccctc gccgcccacc gtggcgatcc agggggcggt ccactcctcg
     2821 cccagcttgc ggcgcaggtt ggcgatgtgg acatccaccg tgcgggcgct gggccgggcg
     2881 tcgggctccc aggccagctg cagcagctct ttgcggctgt gggtgcgccc cggatgggtg
     2941 atgaggatct ccagcaggcg gaactcgcgg ggcgtcagct ccagcaggcg gccttcgcgg
     3001 cgggcctcca gccgggggag gtcgaagcgg aaggggccgg agcgcagcag ggccgggcgg
     3061 tccacggggc gcgtgcggcg caggatggcc ttcacccggg ccatgagctc cagcaccgag
     3121 aagggcttca ccaggtagtc gtcgg
//
LOCUS       DATGWW010000065         2447 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_231039, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000065 DATGWW010000000
VERSION     DATGWW010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2447
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231039"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..289)
                     /locus_tag="VK150_00870"
     CDS             complement(<1..289)
                     /locus_tag="VK150_00870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29879.1"
                     /translation="MATSALRRTLLPLAFLALAGWAAPLRAQGPAPAAKAPAAPPSFT
                     PEEVGINEKLGATIPLDLELKGEDGKPVTLRQLIDKPTILTLNYFRCAGICT"
     gene            complement(298..999)
                     /locus_tag="VK150_00875"
     CDS             complement(298..999)
                     /locus_tag="VK150_00875"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HLP29880.1"
                     /translation="MKINDYLSPEELKRLTSALLVVLGFISIAAFFGFTVVPGLRYQA
                     HTTPDAPIKAVQGETGWLDPTDYPAMAREVIPPIDPKTVMTPNPALMARGKALYAQTC
                     ATCHGADGKGDGPGGTGLTPKPRNFTEKATWKNGTRLEDIYRTLEEGVKGSSMVSYNY
                     LSKKDRMALAHVVQSLGTFDHGASDPKAIASLEKLFASAGEVVPNRIPVARAVDALCR
                     EYAEAHAPAPASTLR"
     gene            complement(996..2159)
                     /locus_tag="VK150_00880"
     CDS             complement(996..2159)
                     /locus_tag="VK150_00880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29881.1"
                     /translation="MSRTPMSQNKKTSNLLWGAVALGALGVLGTYAAAGPARFWANWV
                     LWFILLFTVGLGSLFIVALEHLVNAKWSVPVRRIPERLATLLLPAIPVGLIALGALPV
                     LYPGTRPEAAHHPILAGKAFWLSIPFFSVRTLVAFALCGLGLLVLVGGSLKQDATKDP
                     AFNIRARKFAPAFMAIFALVITLIAFDWISGLTPEWYSDIFGVYIFAGAFLGGLAATA
                     LSVLYLQGQDRLEGVRGDHLYNLGGFLFAFTVFWSYIGFAQYMLMWYANMPDEVIYYK
                     VRLAGSWRAITIALAALHFVLPFFALVTRDSKKDPKRLRRVAYLMLGAHVLDIYWLIF
                     PVLGAKPHFSWPELSFALFFLGGILLWVRGAMEKGEDMPVGDPFLREGLEFRL"
     gene            complement(2156..>2447)
                     /locus_tag="VK150_00885"
     CDS             complement(2156..>2447)
                     /locus_tag="VK150_00885"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HLP29882.1"
                     /translation="GRKAYINRCEVCHGALGNGMGSLTAAYGGKPANLQAQQFRDYPD
                     GKIYWAIVNGKNAMPSHAADLSESQRWAVVHYVRALQRAQNAKDEDLKVATP"
BASE COUNT          394 a          707 c          978 g          368 t
ORIGIN      
        1 gggtgcagat gccggcgcag cggaagtagt tcagggtgag gatggtgggc ttgtcgatga
       61 gctggcggag ggtgacgggc ttgccgtcct cgcccttgag ctcgaggtcc agggggatgg
      121 tggcgcccag cttttcgttg atgcccactt cctcaggcgt gaaggagggc ggggcggccg
      181 gggccttggc cgccggggct ggaccctggg cgcgcaaggg cgccgcccac ccggccaggg
      241 ccaggaaggc gaggggaagg agggtgcgcc ggagcgcgga cgtggccatg ggttgcctca
      301 gcggagcgtg gaggcggggg ccggggcgtg ggcctcggcg tactcgcggc agagcgcatc
      361 cacggcccgg gccacgggga tgcggttggg aacgacctcg cccgcgctgg cgaagagctt
      421 ctccaggctg gcgatggcct tggggtcgct ggcgccatga tcgaaggtgc cgagagactg
      481 gaccacgtgg gccagggcca tgcggtcctt cttggagagg tagttgtagg acaccatcga
      541 gctgcccttc acgccctcct ccagggtgcg gtagatgtct tcgagtcggg tgccattctt
      601 ccaggtcgcc ttctccgtga agttgcgggg cttgggggtc agaccggtgc cgccggggcc
      661 gtcgcccttt ccgtctgcgc cgtggcaggt ggcgcaggtc tgggcgtaga gggccttgcc
      721 gcgggccatg agggccgggt tgggcgtcat gaccgtcttg ggatcgatgg gcgggatgac
      781 ctcccgggcc atggcggggt agtccgtggg atccagccag ccggtctcgc cctggacggc
      841 cttgatgggc gcgtccggcg tggtgtgcgc ctggtagcgc agcccgggca ccacggtgaa
      901 gccgaagaag gccgcgatgc tgatgaagcc gagcaccacc agcagggcgg aggtcaggcg
      961 cttcagctct tccggggaga ggtagtcgtt gatcttcata gccggaactc cagaccctcg
     1021 cggaggaagg gatcgccgac gggcatgtcc tcgccctttt ccatcgcgcc gcggacccag
     1081 aggaggatcc cgccgaggaa gaagagggcg aagctgagct cgggccagga gaagtggggc
     1141 ttggcgccga gcacggggaa gatgagccag tagatgtcca gcacatgcgc gccgagcatc
     1201 aggtaggcca cgcggcggag gcgcttcgga tccttcttcg aatcccgggt gaccagggcg
     1261 aagaagggca ggacgaagtg cagggccgcc agcgcgatgg tgatggcgcg ccaggagccg
     1321 gccaggcgca ccttgtagta gatgacctcg tccggcatgt tggcgtacca catgagcatg
     1381 tactgggcga agccgatgta ggaccagaac accgtgaagg cgaacaggaa gccgcccagg
     1441 ttgtagaggt ggtcgccgcg caccccttcg aggcggtcct gcccctggag gtagagcacg
     1501 gagagcgccg tggcggcgag gccgccgagg aaggcgccgg cgaagatgta gacgccgaag
     1561 atgtcgctgt accactcggg cgtgagcccc gagatccagt cgaaggcgat gagggtgatc
     1621 accagcgcga agatcgccat gaaggccggg gcgaacttgc gggcgcggat gttgaaggcg
     1681 ggatctttgg tcgcgtcctg cttcagggaa ccgcccacca gcaccaggag gccgaggccg
     1741 cagagggcga aggcgaccag ggtgcgcacg gagaagaagg ggatgctcag ccagaaggcc
     1801 ttgcccgcca ggatggggtg gtgcgcggcc tcgggccggg tgccgggata gagcacgggc
     1861 agggcgccga gggcgatgag gccgacgggg atcgccggca ggagcagggt ggcgaggcgc
     1921 tcggggatgc gccggacggg cacgctccat ttggcgttga ccaggtgctc gagggccaca
     1981 atgaagaggg agccgaggcc gacggtgaag aggaggatga accacagcac ccagttggcc
     2041 cagaaccgcg cggggcccgc ggcggcgtag gtgccgagga cgcccagggc gcccagggcc
     2101 acggcgcccc agaggaggtt ggaggtcttc ttgttctggc tcatgggagt tcggctcatg
     2161 gggtggccac cttcaggtcc tcgtccttgg cgttctgggc gcgctgcagg gcacgcacgt
     2221 agtggaccac cgcccagcgc tgcgactcgc tgaggtcggc ggcgtgcgaa ggcatggcgt
     2281 tcttgccgtt cacgatggcc cagtagatct tgccgtccgg gtagtcccgg aactgctggg
     2341 cctggaggtt ggcgggcttg ccgccgtacg ccgccgtgag gctgcccatg ccgttgccca
     2401 gggcgccgtg gcagacttcg cagcggttga tgtaggcctt gcggccc
//
LOCUS       DATGWW010000066         2336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_50953, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000066 DATGWW010000000
VERSION     DATGWW010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2336
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50953"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..181
                     /locus_tag="VK150_00890"
     CDS             <1..181
                     /locus_tag="VK150_00890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29883.1"
                     /translation="VGQEACPLPVILAGTEEDEAKKRHHSVTAGAVDYVAVEPFKILA
                     ILRRLDETLQLFEGA"
     gene            complement(188..1309)
                     /locus_tag="VK150_00895"
     CDS             complement(188..1309)
                     /locus_tag="VK150_00895"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HLP29884.1"
                     /translation="MPWIDLAAWIAAALLLAGLILLRRHWTRLPALETDPPIWPDASV
                     CLCIPVRDEAGELPAALDSWLAQDYPRLQILVVDDGSTDGSTELLREREARHGGRLRV
                     LRNDHLPPGWLGKNHALDLASRQPEAQADWLLFADGDVQASPDLLRRAMAFALSQPTD
                     ILALIPAVDVASPGERVVLPLAASAFLVLVPPHQVPNPRHVAFCGVGAFTLVRRRAYD
                     AVGGHGAAPLEAIDDMMLARRVKAAGFVNRVAQGGPDLHLRMYHGLGELVRAMRKNAA
                     ALPAWWLLPPALPCVLMVGLAPLWLPFAGQPLLALLLWLLVPALAGDVQQRLTGRPMD
                     LLWSLWPLVTLVFAAGTVWALWDRLRGVNHWRGRDVRLG"
     gene            1383..2012
                     /locus_tag="VK150_00900"
     CDS             1383..2012
                     /locus_tag="VK150_00900"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLP29885.1"
                     /translation="MDERVAEAPILRLRRPEDAAEIRDLMVRVYPPPHGPEAIWSTEN
                     LLRHLSHFPEGQLVVEAGRTLVGTATTHRVPLEAALAPHTWSEITGRGSLSTHDPGGD
                     ALYGVNIAVDRDWQGRGVGRLMYQARIDLARRLGCRAFVAGARIPGYHRVAEAMSPEA
                     YVEAVATGRIFDPTLSKQLHIGFQVRGVLRDYAPDVETLGHAALIVLTL"
     gene            2037..>2336
                     /locus_tag="VK150_00905"
     CDS             2037..>2336
                     /locus_tag="VK150_00905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29886.1"
                     /translation="MRFTAPTPFLSRPVRVCGIQYALRPVKDFSAFAEQVENYVDVGD
                     DYDSDVIVFPELLAVQLLSCVTRDFAPAEAMRCLAETFTEGFEDLFLRLSTKYDRI"
BASE COUNT          345 a          828 c          854 g          309 t
ORIGIN      
        1 cgtcgggcag gaagcctgtc ccctgccggt gatcctcgca ggcaccgagg aggacgaggc
       61 caagaagcgg caccattcgg tcaccgccgg agccgtggac tacgtggcgg tggagccctt
      121 caagatcctg gccatcctgc gtcgcctgga cgagaccctg cagctcttcg aaggcgcctg
      181 aggccggtca gcccagccgc acgtcccgcc cccgccagtg gttcacgccc cgcaggcggt
      241 cccacagggc ccagaccgtg cccgcggcga agaccagggt gacgaggggc cacagggacc
      301 acagcaggtc catgggcctt cctgtcaggc gctgctgcac atcgccggcc agcgcgggca
      361 ccagcagcca gagcagcagc gccaggagcg gctgccccgc gaagggcagc cacagcggcg
      421 ccaggcccac catgaggacg cagggcaggg ccgggggcag gagccaccag gccgggaggg
      481 cggccgcgtt cttccgcatg gcgcggacca gctcacccag gccgtggtac atccgcaggt
      541 gcaggtcggg gccgccctgg gccacgcggt tcacgaatcc ggcggccttc acccggcgcg
      601 ccagcatcat gtcgtcgatg gcctccagcg gcgccgcgcc gtggccgccc accgcgtcgt
      661 aggcccggcg gcgcacgagg gtgaaggcgc ccacgccgca gaaggccacg tggcgcgggt
      721 ttggcacctg gtggggcggc accaggacga ggaaggccga ggcggcgagg ggcaggacca
      781 cccgctcgcc ggggctcgcg acatccaccg ccgggatgag ggcgaggatg tcggtgggct
      841 gggacagggc gaaggccatc gctcgccgca gcaggtccgg cgaggcctgc acgtcgccat
      901 ccgcgaagag cagccagtcc gcctgggctt ccggctgtcg tgaggccagg tccagcgcgt
      961 ggttcttgcc gagccaaccc ggcggcaggt ggtcgttgcg cagcacccgg aggcggccgc
     1021 cgtgccgcgc ctcccgctcc cggagcagct ccgtgctgcc gtccgtggag ccgtcgtcca
     1081 ccacgaggat ctgcaggcgg gggtagtcct gggccagcca ggagtccagc gccgccggca
     1141 gttccccggc ctcgtcgcgc acggggatgc agaggcagac ggaggcgtct ggccagatcg
     1201 gcggatccgt ctccagggcg ggcaaccggg tccagtgccg gcgcaggagg atcagtcccg
     1261 cgagcagcag cgcggcggcg atccaggcgg cgaggtcgat ccaaggcatg ggttcagcct
     1321 agcccgaagg gtcgatctgg tggggtgggg tactctggac aggcacgcca ccgggggctc
     1381 ccatggatga gcgcgtcgca gaagctccga tcctgcgcct ccgccgaccg gaggatgcgg
     1441 cggagatccg cgatctgatg gtgagggtct acccgccgcc ccacggcccg gaggccatct
     1501 ggtccaccga gaacctcctg cgccacctga gccactttcc cgaaggtcag ctggtggtgg
     1561 aggccggcag gaccctggtg ggcacggcca cgacgcaccg ggttcctctc gaggcggcgc
     1621 tggcgccgca cacctggtcg gagatcaccg gccggggctc cctctccacc cacgaccccg
     1681 ggggcgatgc gctctacggt gtgaacatcg cggtggaccg ggactggcag gggcgcggcg
     1741 tggggcgcct catgtaccag gcgcgcatcg acctggcccg gcgcctgggc tgccgggcct
     1801 tcgtggccgg ggcgcggatc cccggctacc accgcgtggc ggaggccatg agccccgagg
     1861 cctacgtgga agcggtggcc acgggccgga tcttcgatcc caccctgtcc aagcagctcc
     1921 acatcggctt ccaggttcgc ggggtccttc gggactacgc gccggatgtg gagaccctgg
     1981 gccacgcggc cctcatcgtc ctgacgctct gacggcgcca ttcccaagga gtcgacatgc
     2041 gcttcacggc ccccacgccc ttcctgtcac gtcccgtgcg ggtttgcggc atccagtacg
     2101 ccctgcggcc ggtgaaggac ttctccgcct tcgccgagca ggtggagaac tacgtggacg
     2161 tgggggacga ctacgactcc gacgtcatcg tgttccccga gctgctggcc gtgcagctcc
     2221 tgagctgcgt gacgcgggat ttcgcccccg cggaggccat gcggtgcctg gcggagacct
     2281 tcaccgaggg gttcgaggac ctcttcctcc ggctgtcgac caagtacgac cggatc
//
LOCUS       DATGWW010000067         1680 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_276776, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000067 DATGWW010000000
VERSION     DATGWW010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276776"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..356)
                     /locus_tag="VK150_00910"
     CDS             complement(<1..356)
                     /locus_tag="VK150_00910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29887.1"
                     /translation="MDHLSADVSGPGLQDWSVTGKLSPYLGQLAAMVESRPRAKIKDF
                     YLVLKEQGYTGSYDLVKKKIHFFRRVLGRQAGLAFDSAEAPQAQVEIGKVFLKGGGRE
                     VRAFLFTMVLGHSGRA"
     gene            complement(579..1607)
                     /gene="tdh"
                     /locus_tag="VK150_00915"
     CDS             complement(579..1607)
                     /gene="tdh"
                     /locus_tag="VK150_00915"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF003808.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008743 - L-threonine 3-dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006567 - threonine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HLP29888.1"
                     /translation="MKALGKAKAEPGIWMLDWPEPEPGPNDVLIRVRQTAICGTDLHI
                     SHWDEWARGTIRVPMPVGHEFCGVVEAVGREVRGVEPGRRVSGEGHVTCGHCRNCRAG
                     RRHLCRNSEGLGVNRQGCFAELLSLPAANVFPLPDAVPDDIGCILDPLGNAVHTALSF
                     DLVGEDVLITGAGPIGVMAAAVCRHAGARNVVVTDVNPYRLSLAARMGANRAVDARGE
                     DLGKVMEALGMVEGFDVGLEMSGHEGAFRDLLSRMNHGGKLALLGILPGEASIDWRQV
                     IFKGLILKGIYGREMFETWYKMAAMLQSGLDISPVITHRFPVDRFQEAFDTAASGLAG
                     KVVLDWRI"
BASE COUNT          301 a          556 c          552 g          271 t
ORIGIN      
        1 taggcgcggc cgctgtggcc cagcaccatg gtgaacagga aggcgcggac ctcgcggcct
       61 ccgcccttga ggaagacctt ccctatctcc acctgggcct ggggcgcctc ggcggaatcg
      121 aaggccaggc ctgcctggcg accgagcacg cggcggaaga aatggatctt cttcttgacg
      181 agatcgtagc ttcccgtgta gccctgctcc ttaaggacga ggtagaagtc cttgatcttg
      241 gcccgcggcc ggctctccac catggcggcg agctgcccca ggtagggcga gagcttgccg
      301 gttacgctcc aatcttgaag cccagggccg gatacatccg cagagaggtg atccacctca
      361 tgtcctttct ctcctcccac gccgactgac cgtgacccct cgacgtagcc ggcgcggatc
      421 ccgctcatcg gcgagattcg ttccctaatt tagggagcat catggtggac cgaaggagga
      481 aagttgcacg gagtccgaag aaaaaccttc ggaagcaatg ctatgtgtat ttcctcaaaa
      541 agcaccagtg gatcgggaaa accggaaacg cttcccgatc agatccgcca atcgaggacc
      601 accttgccgg ccagcccgga ggcggcggtg tcgaaagcct cctggaagcg atcgacgggg
      661 aaccggtggg tgatgaccgg ggagatgtcg agtccgctct ggagcatggc ggccatttta
      721 taccaggtct cgaacatttc gcgaccgtag atccctttga gaatcagtcc cttgaagatg
      781 acctgacgcc aatcgatgga agcctcaccg gggaggatgc ccaggagggc cagcttgccg
      841 ccgtggttca tgcgggacag caaatcccgg aaggccccct cgtggccgga catctcgagg
      901 cccacgtcga agccctccac catgccgagg gcctccatca ccttgcccag atcctccccg
      961 cgcgcgtcga cggcgcgatt ggcgcccatg cgggcggcca gggacagccg gtaggggttg
     1021 acatctgtaa ccaccacgtt acgggctccc gcgtgccggc agacggcggc ggccatgacg
     1081 ccgatgggcc ccgcgccggt gatgagcacg tcctcgccca cgaggtcgaa ggaaagggcg
     1141 gtgtggacgg cgttccccag aggatccagg atgcagccga tatcgtcggg aacggcgtcg
     1201 ggcaggggga agacgttggc ggcgggcagg gacaggagct cggcgaagca gccctgacgg
     1261 ttgaccccga ggccctcgga gttgcggcag aggtggcggc ggccggcgcg acagttgcgg
     1321 cagtgtccgc aggtcacgtg gccctcgccg gagacgcgcc ggccgggctc gacgccgcga
     1381 acttcccggc ccacggcctc caccaccccg caaaactcgt gtcccaccgg catgggcacg
     1441 cggatggtgc cccgcgccca ttcgtcccag tggctgatat ggaggtcggt cccgcagatg
     1501 gcggtctgcc gcacgcggat gaggacgtcg ttggggcccg gctcgggctc cggccagtcg
     1561 agcatccaga ttcccggttc ggccttcgcc ttgcccaacg ccttcattgt ttacctcctc
     1621 atccgccggc cttcagccgg ccaggacacc ggcggcccgg cccgccttgc ggaaggccac
//
LOCUS       DATGWW010000068         1640 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_231398, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000068 DATGWW010000000
VERSION     DATGWW010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1640
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231398"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..886)
                     /gene="map"
                     /locus_tag="VK150_00920"
     CDS             complement(89..886)
                     /gene="map"
                     /locus_tag="VK150_00920"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR00500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HLP29889.1"
                     /translation="MVLIREQIRYKSRKEVDKLREAGRVAANALRLAARAARPGVSLL
                     ELDKLAETYIRQNGATPSFKGYHGFPGTLCTSVNDKVVHGIPTKYILQEGDIIAIDCG
                     AKLDGYHGDTCLTVGVGKISEDARRLIQTAQLAMFVGIEHCRPGFRLGDMATAVQTFA
                     EERGYSVVREYIGHGLGRDLHEDPQVVFAEQKPGTGFRMEPGMTITIEPILNTGSHKC
                     LVEADGWTVRTKDGGLSAQFEHDIAITKGAPEILSMPDPEFELEDGL"
     gene            953..1267
                     /locus_tag="VK150_00925"
     CDS             953..1267
                     /locus_tag="VK150_00925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29890.1"
                     /translation="MTFILAGLLGGCRGVPSRPAGVPPEAAWSGEGSRGVFLKVDGHQ
                     GTLWRLAVWDRQGRLLGSGAFRLRGFAKAKIMPEEVLAWENGALHLKDGTWLVPEVQA
                     AP"
     gene            1267..>1640
                     /locus_tag="VK150_00930"
     CDS             1267..>1640
                     /locus_tag="VK150_00930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29891.1"
                     /translation="MPYTREEKDWLEREWAFRAWGRAGLLSTDDYRQVLAWEAEAVPM
                     DLVVSALNAFFDRREKREKPRTFVALKHLDRDVAKAVKLREALHRAGPDLDAGRGWAQ
                     VKAPLQDDPAAKAAFEAWQRLRA"
BASE COUNT          230 a          551 c          593 g          266 t
ORIGIN      
        1 gaggtgctcc gccagatggg gtacgaggga ccggcgccag cgctgccgga cgcggtgcgc
       61 cggtgggctg aagcctagag ccaaaaacct agagcccgtc ctcgagctcg aactcgggat
      121 cgggcatgga gaggatctcc ggggcgccct tggtgatggc gatgtcgtgc tcgaactggg
      181 ccgagagccc gccatccttg gtgcgtacgg tccagccgtc ggcttccacc aggcacttgt
      241 ggctgccggt gttcaggatg ggctcgatgg tgatggtcat gcccggctcc atgcggaagc
      301 cggtgccggg cttctgctcg gcgaagacca cctggggatc ctcgtgcagg tcgcggccca
      361 ggccgtggcc gatgtactcg cgcaccacgg agtagccccg ctcctcggcg aaggtctgca
      421 ccgccgtggc catgtccccc aggcgaaatc ccggccggca gtgctcgatg cccacgaaca
      481 tggccagctg ggcggtctgg atgagccgcc gcgcatcctc gctgatcttg cccacgccca
      541 cggtgaggca ggtgtccccg tggtagccgt ccagcttggc cccgcagtcg atggcgatga
      601 tgtcgccctc ctggaggatg tacttcgtcg ggatgccgtg caccaccttg tcgttcacag
      661 aggtgcagag ggtgcccgga aagccgtggt agcccttgaa gctcggggtc gcgccgttct
      721 ggcggatgta ggtctcggcg agcttgtcca gctccagcag gctcacgccg ggccgggcgg
      781 cccgggcggc gaggcgcagg gcgttggcgg ccacgcggcc cgcctcgcgg agcttgtcca
      841 cttccttgcg gctcttgtat cggatctgtt cgcggatcag gaccatgccc ccctcgtccc
      901 tcagtctaac gggtagaatg tcggcatggc gcgaccttcg acaatcctgg tgatgacatt
      961 catcctggcg ggactcctgg gggggtgccg gggcgtcccg tcccgccccg ctggcgttcc
     1021 gccggaagcc gcctggagcg gcgagggctc ccggggcgtt ttcctcaagg tggacggcca
     1081 ccagggcacc ctgtggcgcc tggccgtgtg ggaccgccag ggccgactgt tgggctccgg
     1141 tgcgttccgg ctccggggct ttgccaaggc caagatcatg cccgaggagg tgctggcctg
     1201 ggagaacggc gccctccacc tcaaggacgg aacgtggctg gtgcccgaag tacaggccgc
     1261 gccctgatgc cctacacccg cgaggagaag gactggctgg agcgcgagtg ggcgtttcgg
     1321 gcctggggtc gcgccggcct gctgagcacc gacgactacc ggcaggtgct ggcctgggag
     1381 gcggaagccg tgcccatgga cctggtcgtg tccgccctca acgccttctt cgaccgccgg
     1441 gagaaacgcg agaagccccg caccttcgtg gccctcaagc acctggaccg ggacgtggcc
     1501 aaggccgtga agctccggga ggccctgcac cgggccgggc cggaccttga tgccggccgc
     1561 ggctgggcgc aggtgaaggc gcccctccaa gacgacccgg ccgccaaggc cgccttcgag
     1621 gcctggcagc gcctccgggc
//
LOCUS       DATGWW010000069         1510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_95259, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000069 DATGWW010000000
VERSION     DATGWW010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95259"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..501)
                     /locus_tag="VK150_00935"
     CDS             complement(<1..501)
                     /locus_tag="VK150_00935"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLP29892.1"
                     /translation="MPTSWGPTTTAIHAGKHHNPTRAVTTPIFQTSVFELMENREGAT
                     FAASIEPPTFYTRWGNPNASEVEAVLARLEGAERALVTASGMAAFALVFEAFLKPGDH
                     LVAPAAIYLGTEQLIRRWEAERGLEVTWVQNTLDLAEWEGALRPETRMIWVETPSNPT
                     LALTDLA"
     gene            complement(529..816)
                     /locus_tag="VK150_00940"
     CDS             complement(529..816)
                     /locus_tag="VK150_00940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29893.1"
                     /translation="MSHEIPAALEACVPGVVHVCVTCGTSVVDAVVTPGEPFRCVDCR
                     GLVPPPADELTRMALEDRGPFDVPDDRPTVWRLVVVLLFAVTALGIVFWKR"
     gene            complement(832..>1510)
                     /locus_tag="VK150_00945"
     CDS             complement(832..>1510)
                     /locus_tag="VK150_00945"
                     /inference="COORDINATES: protein motif:HMM:NF014674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29894.1"
                     /translation="ETRGQRTKEAAMDYRYFPEPDLPPLRVTPAEVEAVRAALPELPE
                     HRIRRWREAYGLGADEAHTLAQSPAFTAYFEALAERCGSGRAAAAWMLGEVSRTLNDR
                     SLAIEAFPVSPDVLAGLVRLVEARTLSLGAAKEQVFPALLAGEGDAEAIVARKGLAQV
                     SDRAAIEDLVAQVLAANPGPVAQIRQGKESLKGFLVGQVLKAGQGRLDAKIVTEVLAE
                     ALAKGGN"
BASE COUNT          209 a          555 c          526 g          220 t
ORIGIN      
        1 cgccaggtcc gtcagggcca gggtggggtt cgagggcgtc tccacccaga tcatgcgggt
       61 ctcaggccga agggcgccct cccactcggc gaggtcgagg gtgttctgca cccaggtgac
      121 ctccaacccg cgctcggcct cccagcggcg gatgagctgc tcggtgccca ggtagatggc
      181 cgccggggcc accaggtggt ccccgggttt caggaaggct tcaaatacca gcgcgaaggc
      241 cgccatgccc gaggccgtca ccagggcccg ttccgcgcct tccagccgcg ccagcaccgc
      301 ctccacctcg ctggcgttgg ggttgcccca gcgggtgtag aaggtcggcg gctcgatgct
      361 ggccgcgaac gtcgcgcctt cgcggttctc catcaattcg aagaccgagg tctggaagat
      421 cggcgtcgtc accgcccgcg tcgggttgtg gtgctttccg gcgtggatgg cagtggtcgt
      481 gggtccccag gatgtgggca tcggtggctc cggaccccca ggataagctc agcgcttcca
      541 gaacacgatg cccagggccg tcacggcgaa cagcagcacc accaccaggc gccacaccgt
      601 ggggcggtcg tccggcacgt cgaagggccc gcggtcctcg agggccatgc gggtcagttc
      661 gtccgccggg ggcggcacca ggccccggca gtccacgcac cggaacggct ccccgggcgt
      721 caccacggcg tcgaccaccg aggtgccgca ggtgacgcag acatgcacca cgccggggac
      781 gcaggcttca agggcggcgg gaatctcgtg gctcatggtc ccagcatcgg gtcaattgcc
      841 gcccttggcc agcgcctcag ccagcacctc ggtcacgatc ttggcgtcca ggcgtccttg
      901 gcccgccttg aggacctgtc ccaccaggaa gcccttgagg ctttccttgc cctggcggat
      961 ctgcgccacg gggccggggt tcgccgccag cacctgcgcc accaggtcct cgatggccgc
     1021 ccggtcgctg acctgggcca agcccttccg ggccacgatg gcctcggcgt cgccctcgcc
     1081 cgccagcagg gccgggaaca cctgctcctt ggcggcgccc agggagagcg ttcgggcctc
     1141 caccagccgc accagacccg ccagaacgtc ggggctcacc gggaaggcct cgatggccag
     1201 gctgcggtca ttcagggtcc ggctcacctc cccgagcatc caggccgccg cggcccggcc
     1261 ggagccacag cgctccgcca gggcttcgaa gtacgcggtg aaagccgggc tctgggccag
     1321 ggtgtgcgcc tcgtccgcac ccaggccgta cgcctcgcgc cagcgacgga tccggtgctc
     1381 cggcagctcc ggcagggcgg cccggaccgc ctcgacctcg gcgggcgtca ccctcagggg
     1441 cggcaggtcc ggctcgggga agtagcggta gtccatggcg gcttccttgg tgcgctggcc
     1501 ccgggtttcg
//
LOCUS       DATGWW010000070         1720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_277063, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000070 DATGWW010000000
VERSION     DATGWW010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277063"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1293)
                     /locus_tag="VK150_00950"
     CDS             complement(<1..1293)
                     /locus_tag="VK150_00950"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HLP29895.1"
                     /translation="MSLKVLKFGGSSVGSAEALRRAASIVKEELPGGGLVVVSALKGT
                     TDRILDACVAAGRGDLAAAQSHLAALREHHRDVAAELNLFAAVERPWAQLFERLDQLL
                     TGMAMLGEATPRARDSALAVGETLSANLAAFCFGGTFREVREVLQTDARHGKARPLLD
                     AIRAAAAPWREALAPDPLTGPLWVTQGFLGVSPEGLTTTLGRGGSDTSATLLGEALGA
                     AEVQIWTDVDGVLTADPSLVREAQPIPQMSLGEAEALSTFGAKVLHADSLAPGGRAGF
                     RLVVANTLRPGASRTEILPLAPERPAGAVTSVAYKEGISLLRFPASAGLEPPLEAARS
                     LEEAGALRFGLIASPAGTLLAVRPETPAATAALATLAASGLACESGWAVVALVGEGLR
                     ADPVAALRHLAALGHEPIGGLLTGSSTVSIAFLVPESRL"
     gene            complement(1290..>1720)
                     /locus_tag="VK150_00955"
     CDS             complement(1290..>1720)
                     /locus_tag="VK150_00955"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: protein motif:HMM:NF016120.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HLP29896.1"
                     /translation="HRLAAASARITQGFDDVFFAPHSRHTETRREDILAAPGLELLAE
                     SPEAGVYLIQSADRRQVFVTGHAEYDARTLGDEYARDLAKGVPIELPRNYFPEDDPAG
                     PPLVRWRSHANLLFANWLNHTVYQETPYDLGRLPQEGSRP"
BASE COUNT          229 a          585 c          678 g          228 t
ORIGIN      
        1 caggcgcgac tcgggcacga ggaaggcgat ggagacggtg ctgctgccgg tgagcaggcc
       61 gccgatgggc tcgtggccca gggcggcgag gtggcgcagg gccgccaccg ggtcggccct
      121 caagccttcc cccaccaggg ccaccacggc ccagccggat tcgcaggcca gtccagaggc
      181 cgccagggtg gccagcgccg ccgtggcggc gggggtctcg gggcgcacag cgagcagggt
      241 gcccgccgga ctcgcgatca ggccgaagcg cagcgccccg gcctcctcca ggctgcgggc
      301 ggcctccagg ggcggttcca ggcccgccga ggccgggaag cgcaggaggc tgatgccttc
      361 cttgtaggcc acggaggtga ccgcgccggc ggggcgttcg ggggccaggg gcaggatttc
      421 cgtgcgggag gcgccgggtc gcagggtgtt ggcgaccacc aaccggaacc cggcgcggcc
      481 gcccggagca agagaatccg cgtggagcac cttggccccg aaggtgctca gggcctccgc
      541 ctcgcccagg ctcatctggg ggatgggctg ggcctctcgc accaggcttg ggtccgcggt
      601 gagcacgcca tccacgtcgg tccagatctg gacttccgcg gcgccgaggg cttcacccag
      661 cagggtggcg ctggtgtccg atccgccccg gcccagggtg gtggtcaggc cctcgggtga
      721 gacgccgaga aagccctggg tcacccagag cgggcctgtg agcgggtcag gggccagggc
      781 ctcgcgccag ggcgccgcgg cggcgcggat ggcgtccagc aggggccgcg ccttgccgtg
      841 gcgggcatcg gtctgcagca cctctcgcac ctcgcggaag gttccgccga aacagaaggc
      901 cgccaggttc gccgagaggg tttcgcccac ggccagggcc gaatcccggg cccggggcgt
      961 ggcctcgccg agcatggcca tgccggtgag cagctggtcc agccgctcga agagctgggc
     1021 ccaggggcgc tccaccgccg cgaagaggtt cagctccgcc gccacgtccc ggtgatgctc
     1081 ccgcaatgcc gcgaggtggg actgggcggc ggcgaggtcg cctcggcctg ccgccacgca
     1141 ggcgtcgaga atgcggtctg tggtgccctt cagggcggat accaccacga gtccgccgcc
     1201 cggcagctcc tccttcacga tgctggcggc ccggcgcagc gcttcggcgc tgcccacgga
     1261 gctgccgccg aatttgagga ccttcaggct catgggcggc tcccttcctg cgggagccgg
     1321 cccaggtcgt agggcgtctc ctggtagacg gtgtggttca gccagttggc gaagaggagg
     1381 ttggcgtggc tccgccagcg gacgaggggc ggacctgccg gatcgtcttc cgggaagtag
     1441 ttccggggga gctcgatggg cacgcccttg gcgaggtccc gcgcgtactc gtcgcccaaa
     1501 gttcgggcgt cgtactcggc gtggccggtc acgaagacct ggcggcggtc ggcggactgg
     1561 atcaggtaga ccccggcctc cggggactcg gcgaggagct ccagacccgg cgcggcgagg
     1621 atgtcctccc ggcgcgtttc cgtgtggcgc gagtggggcg cgaagaacac atcgtcgaag
     1681 ccctgggtga tccgggcgct cgcggcggcc aggcggtggg
//
LOCUS       DATGWW010000071         2251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_277230, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000071 DATGWW010000000
VERSION     DATGWW010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2251
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277230"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VK150_00960"
     CDS             complement(<1..312)
                     /locus_tag="VK150_00960"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLP29897.1"
                     /translation="MRLISLELHGFKSFADAQKLSFPGGMTAVVGPNGCGKSNISDSL
                     AWVLGEQRVSMLRGSEMADVIFAGTAQRRATGMAEVKLVLEMPDPALPGATREVVISR
                     RL"
     gene            570..1301
                     /locus_tag="VK150_00965"
     CDS             570..1301
                     /locus_tag="VK150_00965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29898.1"
                     /translation="MKLPNLATPDTSLLWLEAHRVIAGPHRRAMGGAPTEDQLAQALA
                     SLPPGPTRWVVDDLWTPSFILRDLTELPKGAEAQEAFFRWRFSQALALEDPHFVQALE
                     VESGLWLASGIREDLRETFLQLGLRLERNVHALVPRWLHLYNQLAPSLSLPGMLLSLS
                     PVEPGRFAGTLVAWGRTLCLLRQWSEPLDPAGWLEERIAPSAAFLQRESRTPQHLYVW
                     GAPAWPESSLPTTILDERSVLGEVR"
     gene            1301..2239
                     /locus_tag="VK150_00970"
     CDS             1301..2239
                     /locus_tag="VK150_00970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29899.1"
                     /translation="MAVPVLQLNLAPRPSLWRQRHGLLGWVALGIGTVFLAGTIGFTW
                     RAYHQASKAGREAVSFTEEARRAARREKELQASLQDMDATREQSRWKLAERILQERSL
                     PWSRLTAELEQCMVPDMRLKGFQRVRSNAQQVVLKLKGEARTREAEAAFVEALRGAPV
                     FEQVVLEREAERMGGGWDFELSLPAAAVPPPFHLKVMKPAAAQAVAAPVAVAMPAGKA
                     TGPRPATSRPPVPSARPLAPAANPVAPSGKAPGAGTPNLAPPLTRPGGALIPPPGAAS
                     PNRPAPAAEEEEDGRRPRPRLRDRPVGPGAEPKRLP"
BASE COUNT          311 a          874 c          760 g          306 t
ORIGIN      
        1 gaggcgccgc gagatcacca cctcgcgcgt ggccccgggc agggccgggt cgggcatctc
       61 gagcaccagc ttgacctcgg ccatgcccgt ggcgcggcgc tgggccgtgc cggcgaagat
      121 cacgtccgcc atctcggagc cccgcagcat ggagacccgc tgctcgccca gcacccaggc
      181 caggctgtct gagatgttcg acttgccgca gccattgggg ccgaccacgg cggtcatgcc
      241 gcccgggaag ctcagcttct gggcgtcggc gaaggacttg aatccatgaa gttcgaggga
      301 gatcaggcgc acgcggtcag cgctccagga aaggcgaaag ggaacatctc cccccatcat
      361 tccacatcag gctgaagatc cggccctccg aacggcgccg ggccccttgg gaaatggccg
      421 gaagccagct agactcggat ctttccctag gcaagtcagg agctacctgt gacgcctctc
      481 ccagccctcg cgcacgaccc tcggtctgag ccgggcgagg ccggcttctt ctcaggtcgg
      541 ccgaggcact gcgcgaaagg gcgacggtcg tgaagcttcc caaccttgcc acgccggaca
      601 cctccctgct ctggctggag gcccaccggg tcatcgcagg cccccatcgc cgcgccatgg
      661 gcggcgcacc caccgaggat cagctcgccc aggccctggc ctctctgccg cccggcccca
      721 cccgctgggt ggtggacgac ctgtggaccc cttccttcat cctccgggac ctgaccgagc
      781 tgcccaaggg cgcggaggcg caagaagcct tcttccgctg gcggttcagt caggccctgg
      841 cgctggaaga cccccacttc gtccaggcgc tggaagtgga atccggcctc tggctcgcct
      901 cgggcatccg cgaggacctg cgcgagacct tccttcagct gggcctgcgc ctggagcgca
      961 acgtgcacgc cctggtcccc cgctggctgc acctctacaa ccagttggca ccttccctga
     1021 gcctgccggg catgctgctg tcgctcagcc ccgtggagcc cgggcgcttc gccggcacgt
     1081 tggtggcctg gggccgtacg ctctgcctgc tccggcagtg gtccgagccg cttgatcccg
     1141 cgggctggct ggaggagcgc atcgccccga gcgccgcctt ccttcagcgc gaatcgcgca
     1201 cgccccagca cctctacgtg tggggcgccc cggcctggcc tgagagcagc ctgcccacca
     1261 cgatcctgga cgagcggtcc gttctgggcg aggtgcgctg atggccgtgc ctgtcctcca
     1321 gctcaacctg gcgccccggc ccagcctctg gcgccagcgc cacggcctgc tcggttgggt
     1381 ggcgctgggc atcggcacgg tcttcctggc cggcaccatc ggcttcacct ggcgcgccta
     1441 ccaccaggcc agcaaggcgg gccgcgaggc ggtgagcttc accgaggagg ctcgccgcgc
     1501 cgcgcgccgg gagaaggagc tccaggcctc gctccaggac atggacgcca cccgcgagca
     1561 gtcccggtgg aagctggccg agcgcatcct ccaggagcgg agcctgccct ggtcgcgcct
     1621 cacggcggaa ctcgagcagt gcatggtgcc cgacatgcgc ctcaagggct tccagcgggt
     1681 gcgcagcaac gcccagcagg tggtcctgaa gctcaagggc gaggcccgca cccgcgaggc
     1741 cgaagccgcc ttcgtggagg ccctgcgcgg ggccccggta ttcgagcagg tggtgcttga
     1801 gcgggaggcc gagcgcatgg gcggcggctg ggacttcgag ctgagcctgc ccgcggccgc
     1861 ggtgccgccc cccttccacc tgaaagtcat gaagcccgcg gccgcccagg ccgtggccgc
     1921 cccggtggcg gtcgccatgc ccgccggcaa ggccacaggt ccccggcccg ccacgtcccg
     1981 gcccccggtg cccagcgccc ggcccctggc gccggccgcg aatccggtgg cacccagcgg
     2041 gaaggcgccg ggcgccggaa ccccgaacct ggctccgccc ctcacccggc ccggcggcgc
     2101 cctgatcccg ccccccgggg ctgcctcgcc caaccggccc gcgccggccg ccgaggagga
     2161 agaggacggc cgccggccgc gtccccgcct gcgtgaccgc ccggtcggcc cgggtgccga
     2221 acccaagagg ctcccgtgaa cagccccctc c
//
LOCUS       DATGWW010000072         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_6201, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000072 DATGWW010000000
VERSION     DATGWW010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6201"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..815)
                     /locus_tag="VK150_00975"
     CDS             complement(<1..815)
                     /locus_tag="VK150_00975"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HLP29900.1"
                     /translation="MNRCVLAATQGEGPRRALLLAGGGMRVAWQVGALLALEAAGLRF
                     HHFDGASGGTMNLAMLLSGLSPGAMAARWRDLDLRAFISLLPLADYLKGDWPALGDAD
                     GVRGGVFPALGIDLARVRACEGLSATFNVCNFTRKTLEAVPHTDLDEDLLVAAVSLPA
                     FMPAVRRGGMTYTDAVWIKDTNLWEAVTRGAEELWLLWCIGNTPTYRDGAFPQYVHMI
                     EMSANGALFLELDRIRELNGRIARGDSPYGQRQPVRLHVVRPEQALPLDPDFYL"
     gene            complement(812..1198)
                     /locus_tag="VK150_00980"
     CDS             complement(812..1198)
                     /locus_tag="VK150_00980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29901.1"
                     /translation="MKVSLRRLLLAIAGLTALTGAIQLLAPALVLRLVGGPGGAEPRF
                     LFAILGMFMVLFGGLALQALRAPAAFQPLPIRWAALQKLGAAGAVGLGVAKGIFGPVA
                     SLVAAFDLLTGILFFVYLRRLARGRR"
     gene            complement(1195..>1618)
                     /locus_tag="VK150_00985"
     CDS             complement(1195..>1618)
                     /locus_tag="VK150_00985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29902.1"
                     /translation="WALHYFWFPSWHHLTVATYYEQFIPQTQAATHFFTYWVPITGVC
                     LCIMAWSERKTRLRWVPWAGLLLLGISTYVGQGHIIPINKYLAAHVTDQAVLTEHLER
                     WIRLNNIRWVTETLAWAVMVYYFLAKGRLPQRIVEDLA"
BASE COUNT          284 a          542 c          590 g          202 t
ORIGIN      
        1 aggtagaagt ccgggtccag cggcagcgcc tgttccggcc ggaccacgtg caggcgcacc
       61 ggctggcgct ggccgtaggg cgaatctccc cgggcgatgc gcccgttcag ctcgcggatg
      121 cggtccagtt cgaggaagag cgcgccgttg gcgctcatct cgatcatgtg gacgtactgg
      181 gggaaggcgc cgtcgcggta cgtcggcgtg ttgccgatgc accagagcag ccagagttcc
      241 tccgcgccgc gcgtcaccgc ctcccacagg ttcgtgtcct tgatccacac agcgtcggtg
      301 taggtcatgc ctccgcggcg cacggcgggc atgaaggcgg gcagcgacac ggcggcgacc
      361 aggagatcct cgtccaggtc cgtgtgggga acggcttcaa gggtcttccg ggtgaagttg
      421 cacacattga aggtggcgct cagcccctcg caggcccgca cccgagccag gtcgatgccc
      481 agggccggga acacgccgcc gcgcaccccg tcggcgtcgc cgagggcggg ccaatcgccc
      541 ttgaggtagt ccgccagagg caggagggag atgaaggcgc ggaggtccag gtcccgccac
      601 cgggccgcca tggcgccagg cgagaggccg gagagcagca tcgccaggtt cattgtgccg
      661 ccggacgcgc cgtcgaaatg gtggaagcgc aggcccgccg cctccagggc caggagcgcg
      721 ccgacctgcc aggccacgcg catgccgccc cccgccaaga ggagggcgcg gcgagggcct
      781 tcaccctggg tggcggcgag gacacaacgg ttcatcgccg gcctcgagca aggcgccgca
      841 ggtagacgaa gaacaggatg cccgtcagca ggtcgaaggc cgccaccaga ctggccacgg
      901 gcccgaagat gcccttcgcc acgccgagcc ccacggcccc ggcggcgccc agcttctgga
      961 gcgccgccca gcggatgggc agaggctgga atgccgccgg cgcgcgcagg gcctgcaggg
     1021 ccagcccccc gaacagcacc atgaacatgc cgaggatggc gaagaggaac cgtggctcgg
     1081 cgccgccggg gccacccacc aggcgcagca ccagggctgg cgcgagcaac tggatggccc
     1141 cggtcagggc cgtgagcccg gcgatggcca ggagcaggcg ccgcagcgag accttcatgc
     1201 gaggtcctcc acgatgcgct gaggcaaccg gcccttggcc aggaagtagt agaccatcac
     1261 ggcccaggcc agggtctcgg tcacccagcg gatgttgttc aggcggatcc agcgctcaag
     1321 gtgctcggtg agcaccgcct gatccgtgac gtgggccgcc aggtacttgt tgatgggaat
     1381 gatgtggccc tgccccacgt aggtggagat gcccaggagc aggagcccag cccagggcac
     1441 ccagcgcagg cgggtcttcc gctcggacca ggccatgatg cagaggcaca cccccgtgat
     1501 cggcacccag taggtgaaga agtgcgtcgc ggcctgggtc tgggggatga actgctcgta
     1561 gtacgtcgcc acggtcaggt gatgccagga ggggaaccag aagtagtgca gggcccac
//
LOCUS       DATGWW010000073         1624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_412758, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000073 DATGWW010000000
VERSION     DATGWW010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412758"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..422
                     /locus_tag="VK150_00990"
     CDS             <1..422
                     /locus_tag="VK150_00990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29903.1"
                     /translation="AGPFLGLNLEVARTNRSFSDLRWETELRVLAGVQAQDWMLAVNP
                     VFTWPLSDGQGRGTPDFSTAWKATYTRWKTAAPGLELYLDHGMLNQVDLTREQSQRLF
                     ATLDVDHGPLVFNVGLGRGLNAASERWTLKFIFEFAF"
     gene            complement(378..>1624)
                     /locus_tag="VK150_00995"
     CDS             complement(378..>1624)
                     /locus_tag="VK150_00995"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HLP29904.1"
                     /translation="VAIHPQDGSGLAGDCAALVVSTAVEEEVPDVAAARRLGVPVLHR
                     SELLAHLVAQHRTVAITGTSGKSTTVAMAFEILRGAGREPSVITGGELVALQREGRWG
                     NAWAGASDLLVIEADESDGSVVRYHAAVGVILNLQRDHKEMDAVAELFRAFRAQVREA
                     AVVGAADNLREFARGARVFGLAATADLHPDDLCLGPDGSSFTVRGVPFRLPVPGEHNV
                     ENALAAIAACEALGVPLAAMAGSLAAFQGVARRFQMLGADRGVAVVDDFGHNPAKVAA
                     SIRAAHLRVAGRGRVLAVFQPHGFGPLKFLRTDFVAAFSHELAPGDRLWFLDVFYAGG
                     TAARDISSTDVVADLVARGVAAEHAPSRDWLAARLAAEARPGDLILVMGARDPSLTDL
                     ARQILRQLSERELEDELEGPAL"
BASE COUNT          247 a          618 c          558 g          201 t
ORIGIN      
        1 ccgcgggccc cttcctcggc ctgaacctcg aggtggcccg caccaaccgc agcttctccg
       61 acctgcgctg ggagacggag ctccgcgtgc tggccggcgt acaggcccag gactggatgc
      121 tggccgtgaa ccccgtgttc acctggcccc tttccgatgg ccagggccgg ggaactccgg
      181 atttcagcac agcgtggaaa gccacctaca cgcgctggaa gaccgcggcg ccgggcctgg
      241 agctgtacct cgaccacggg atgctcaacc aggtggacct cacccgggag cagagccagc
      301 gcctcttcgc gacactggat gtggaccacg gccccctggt cttcaacgtc ggcctgggtc
      361 gcgggctcaa cgcggcctca gagcgctgga ccctcaagtt catcttcgag ttcgcgttct
      421 gaaagctgcc gcaggatctg acgcgccagg tcggtcaggg aggggtcccg ggcccccatc
      481 accaggatga ggtcgccggg ccgcgcctcc gcggcgaggc gcgccgccag ccagtcccgg
      541 gagggggcgt gctcggcggc cacgccccgg gccacgaggt cggccaccac gtcggtggag
      601 ctgatgtccc gggcggcggt gcccccggcg tagaacacat ccaggaacca cagccggtcc
      661 ccgggcgcca gctcgtggga gaaggcggcc acgaaatccg tccggagaaa tttcaggggg
      721 ccgaagccgt ggggctggaa gaccgccagc acccgccccc ggccggccac ccgcaggtgg
      781 gccgcccgga tggaggccgc caccttggcc gggttgtggc cgaagtcgtc caccaccgcg
      841 acaccgcgat ctgcgcccaa catctggaag cgccgggcca cgccctggaa ggccgccagg
      901 gagccagcca tggccgccag cggcaccccc agcgcctcgc aggcggcgat ggcggccaag
      961 gcgttctcga cgttgtgctc cccgggcacg ggcagccgga agggcacgcc ccgcaccgtg
     1021 aagctggatc catcaggccc caggcacagg tcgtccggat ggaggtcggc agtcgcggcc
     1081 aggccgaaca cccgggcgcc ccgcgcgaat tcgcgcaggt tgtccgccgc ccccaccacg
     1141 gcggcctccc gcacctgggc ccggaacgcg cggaacagct ccgccacggc gtccatctcc
     1201 ttgtggtccc gctgcaggtt gaggatcacc cccacggcgg cgtggtagcg caccacggaa
     1261 ccatcgctct cgtccgcctc gatcaccagc aggtcggagg caccggccca ggcgttgccc
     1321 cagcggccct cccgctgcag ggccaccagc tcgcctccgg tgatgacgga gggttcccgg
     1381 ccggcccccc gcaggatctc gaaggccatg gccacggtgg tcgatttgcc gctggtgccc
     1441 gtgatcgcca cggtgcggtg ctgcgccacc aggtgggcca gcagctccga gcggtgcagc
     1501 acaggcacac ccaggcggcg tgcggcggcg acgtcgggca cctcctcctc caccgcggtg
     1561 gacaccacca gggccgcaca gtcgcccgcc aggcccgacc catcctgggg gtggatcgcc
     1621 acac
//
LOCUS       DATGWW010000074         2052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_412844, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000074 DATGWW010000000
VERSION     DATGWW010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412844"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..592)
                     /locus_tag="VK150_01000"
     CDS             complement(<1..592)
                     /locus_tag="VK150_01000"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29905.1"
                     /translation="MVLKTCRPDLSARLISAPDFFLKAGVATEVEHDNLVACLDVQEE
                     MGRVFTARAHVEGMDFEAWARGNRREGNYYTRGLELLWQTCQGLSALHERSRHLNIHP
                     GNLLVTPLMAKLTDWDPRFLGSMEMTPEPFPFRPEYAGYRAPEMQVRGSFLSYPSTDL
                     YAVAGLLYRLVLGEHPGRDPSGNLSAIKGLDEELARF"
     gene            895..1497
                     /locus_tag="VK150_01005"
     CDS             895..1497
                     /locus_tag="VK150_01005"
                     /inference="COORDINATES: protein motif:HMM:NF024969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HLP29906.1"
                     /translation="MSAQDLSHSIKTSLQEGRRALDAFLDDASQARSIEDAARMLAAC
                     FAAGGKVISCGNGGSACDAIHFAEEFTGRFIKDRKPLPAIPLTDPGHLTCVGNDYGYD
                     EVFARGVVAYGKPGDVLVGISTSGNSRNVIRAVEEARKLGMKVVLLLGKGGGALKGKA
                     DAEIWVRHEATERIQEVHMLALHVVIESVERILFPENYRG"
     gene            1624..>2052
                     /locus_tag="VK150_01010"
     CDS             1624..>2052
                     /locus_tag="VK150_01010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29907.1"
                     /translation="MTEFPNGLRTGSNGRFPIRACLAFLVLLLAVPPASAKAGRGEIT
                     EDSLQTLVAQQPENPSHWIQLGTLAVKGGQVDLAKGYFDEAIKLSGRDGSTILQVGSI
                     WLTHGWVKASLTYLMPNLAHLDSAKLDKLQGGLEMEKMLSV"
BASE COUNT          346 a          652 c          684 g          370 t
ORIGIN      
        1 ggaaacgcgc cagttcctcg tccaggcctt tgattgccga aagatttccg gacgggtccc
       61 gtccgggatg ctcgcccagg acgaggcggt agagcaggcc ggccacggcg tagaggtcgg
      121 tgctgggata gctgaggaag cttccccgga cttgcatttc cggcgcccgg tacccggcgt
      181 attcgggccg gaacgggaac ggttcggggg tcatttccat gctgcccagg aagcggggat
      241 cccaatcggt cagcttggcc attagggggg tcaccagcag gtttcccggg tggatgttga
      301 ggtggcggct gcgctcatgc agggcggaaa ggccctggca ggtctgccag agtagctcga
      361 gcccgcgggt gtagtagttg ccctcgcgcc ggttgccgcg ggcccatgcc tcgaagtcca
      421 tgccttccac gtgggcgcgg gccgtgaata cccggcccat ctcctcctgg acgtcgaggc
      481 aggccacgag gttgtcgtgt tccacttcgg tggccacgcc ggctttaagg aagaagtcgg
      541 gggcggagat cagcctggcc gagaggtcgg ggcggcaggt tttgaggacc aacctggtca
      601 tccccgacgt ggccaagtag gagcggccgg atggggattc ccccagcaat ccctccacca
      661 cgtatttgtt cgcgacgact tcgccgcttg cgtattccgt ttgcggtccc atgggagacc
      721 aaattaacat tttaaccgga ggccggtctc cggacactcc ggtcgcgcgg cccccggatg
      781 tgatcccgcc cacagccgcg gattgcgggg caggggcgga actttgtatc attatcgggc
      841 acatttccca acgaatccgg gcggccggtg cttccgcgtc cccgaggaga ccccatgagc
      901 gcccaggacc tgagccactc tataaagacc tctctccagg aggggcgcag ggctttggac
      961 gccttcctgg acgacgcttc ccaggcccgg tccatcgagg acgccgcccg catgttggcc
     1021 gcgtgcttcg ccgcgggcgg caaggtcatc agctgcggca atggaggctc cgcctgcgat
     1081 gccatccact tcgccgagga gttcaccggc cggttcatca aggatcgcaa gcctctgccg
     1141 gccattcccc tcaccgatcc cggacacctc acctgcgtgg gtaacgacta cggctacgac
     1201 gaggtcttcg cccgcggcgt ggtggcctac ggcaagcccg gcgacgtgct cgtgggcatc
     1261 agcaccagcg gcaattcgcg gaacgtgatc cgcgcggtgg aggaggcccg caagctcggg
     1321 atgaaggtcg ttctcctgct gggcaagggt gggggagcct tgaaaggcaa ggctgacgcc
     1381 gagatttggg tgcggcacga ggcgaccgaa cgcatccagg aggttcatat gctggccctg
     1441 cacgttgtca tcgagagcgt ggagcgcatc ctgttcccgg agaactaccg cggctgacgc
     1501 ggttaagcga cggaaggccg ggcgggctta ttagtgtatt tttccacgga tcaggcgatg
     1561 gttccggaag ctctcgggac gggctcccgg ggctcttccg gggaacgagg aagacgggtg
     1621 gtgatgaccg aattccctaa cgggctccgg accggttcca atggccggtt cccgatccgc
     1681 gcttgccttg ccttcctggt cctcctcctc gcggtccctc cggcttccgc caaagctggg
     1741 cgcggcgaga tcaccgagga ttccctgcag accttggtcg cgcagcagcc ggagaatccc
     1801 tcccactgga tccagctcgg aaccctcgcc gtcaagggcg ggcaggtgga tctcgccaag
     1861 gggtatttcg acgaggccat caagctctcc ggccgcgacg gaagcaccat cctccaggtg
     1921 ggcagcatct ggctgaccca cggctgggtc aaggccagcc tcacctacct catgcccaac
     1981 ctggcccatc tcgactccgc caagttggac aagctccagg ggggcctcga gatggagaag
     2041 atgctctccg tt
//
LOCUS       DATGWW010000075         2361 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_6267, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000075 DATGWW010000000
VERSION     DATGWW010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6267"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..570)
                     /locus_tag="VK150_01015"
     CDS             complement(<1..570)
                     /locus_tag="VK150_01015"
                     /inference="COORDINATES: protein motif:HMM:NF014195.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009427 - bacterial-type flagellum basal
                     body, distal rod, L ring [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HLP29908.1"
                     /translation="MHRIVIPVLAAGLLVSAGAQLPRNFSLYTDKKAMKVEDVITVLI
                     LEDAKAANDAKTTTDKSQDASVDLNPLTATWGGNPTEYTPKVGFGGGVKQKYDGQGKT
                     SRKGEVKATVSARIVAVYDNGNLLIEGNKEVEINSEKEIIRVSGIVRPEDISPDNTIL
                     SEKIADARIQYTGQGDVHQAARPGILARIV"
     gene            complement(581..1540)
                     /gene="flgA"
                     /locus_tag="VK150_01020"
     CDS             complement(581..1540)
                     /gene="flgA"
                     /locus_tag="VK150_01020"
                     /inference="COORDINATES: protein motif:HMM:TIGR03170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation chaperone
                     FlgA"
                     /protein_id="HLP29909.1"
                     /translation="MTALLLLLVLAAAPSGADGGSTVSIRFREHAEVDGPSIRLGEIA
                     RIVADEDREVARLESLVVAKAAAFGLTRVLDTESLLARHQALLGPGYILDADRKSIKV
                     TTRSVLLPADSLARRIDEFLAAQERGEGEKRTWEMIRAPAELRVPAAPHSLEVGFSGI
                     RRKGKVELGVAIRAQGRIVRTLPVTVNVRVEEPVLVALRTVPLGEVLDASNSKVEIRE
                     TTQMNDLAMAEPARLQGRVAKVTIAPGRIVTPLMVAMPPVVRRGQEAKLIYRQGDVKI
                     TTGVVCRQDGIPGQIITATSLVNRRLLRVRVTDAGHLEPVPGG"
     gene            complement(1540..2328)
                     /gene="flgG"
                     /locus_tag="VK150_01025"
     CDS             complement(1540..2328)
                     /gene="flgG"
                     /locus_tag="VK150_01025"
                     /inference="COORDINATES: protein motif:HMM:TIGR02488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009426 - bacterial-type flagellum basal
                     body, distal rod [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HLP29910.1"
                     /translation="MIRSLYTAATGMKANQLYIDNISNNLSNVNTTGYKKSKLEFQEL
                     LYQTMQDPGAGNSDGSRSPAGLQVGLGVRSAATQKIFAQGNLTETKNPMDLAISGEGF
                     LQVQLPSGEVAYTRDGSLKVAADGTLVTSSGFPLEPQINIPQGARDLTVDPNGRVAVT
                     LNETGAQEEIGQIEIVKFLNEGGLKNLGGNLYQATSASGEPEAVMPGTSGTGTLAQGF
                     LESSNVELVEEMVAMIVAQRAYEISAKAIQTSDSMLQMANQLRS"
BASE COUNT          373 a          729 c          805 g          454 t
ORIGIN      
        1 cacgattctc gccaaaatcc ccggccgcgc cgcctggtga acatcgccct ggcccgtata
       61 ctggatgcgg gcatcggcga ttttttcgga aagaatggtg ttgtcgggcg agatgtcctc
      121 gggacggaca atgccggaga ctcggatgat ctccttttcg ctattgatct ccacttcctt
      181 gttgccctcg ataaggaggt tgccgttgtc gtagacggcc acgatgcggg ccgacacggt
      241 ggctttcact tctcccttgc gggaggtctt gccctggcca tcgtatttct gtttcacgcc
      301 cccgccgaat cccaccttgg gggtgtactc ggtgggattt ccgccccagg tcgccgtgag
      361 cggattgaga tccaccgagg cgtcctggga cttgtccgtg gtggtcttgg cgtcgttggc
      421 ggccttggca tcctcgagaa tgagaacggt gatcacatcc tccaccttca tggccttctt
      481 gtcggtatag agggagaagt tgcgcggaag ctgggcgccg gcggagacca gcaggccggc
      541 ggcgaggacg gggatgacga tacgatgcat ggactcctcc tcaaccgccc ggcacgggct
      601 ccaggtggcc ggcgtcggtc acgcgcaccc tgaggagacg ccggttcacg aggctggtgg
      661 cggttatgat ctggccggga atcccgtcct ggcggcagac caccccggtg gtgattttca
      721 cgtcgccctg acggtagatg agcttggcct cctgtccgcg gcgcaccacg ggaggcatgg
      781 ccaccatgag gggcgtgacg atgcgcccgg gagcgatggt caccttggcc acccggccct
      841 ggaggcgggc gggttcggcc atggcgaggt cgttcatctg ggtggtctcg cggatctcca
      901 ccttggaatt ggaggcgtcg agaacttctc ctagcggcac ggtacggaga gccacgagta
      961 ccggctcctc cacccggaca ttcacggtca ccggcagggt gcgcacgatg cgaccctggg
     1021 cgcgaatggc cacgcccagc tccaccttgc ccttgcggcg aataccggaa aagcccacct
     1081 cgagggaatg aggcgcggca ggcacgcgca gttccgcggg ggcgcggatc atctcccagg
     1141 ttcgcttctc gccctcgccg cgctcctggg ctgccaggaa ctcgtcgatg cggcgcgcca
     1201 gggaatcggc ggggagcagg accgagcggg tagtcacctt gatggacttg cgatcggcgt
     1261 cgaggatgta gccgggtcca agcagggcct gatggcgcgc cagcagggac tccgtatcca
     1321 gaacgcgggt gagcccgaag gccgcggcct tggccaccac caaggactcc aggcgggcga
     1381 cctcgcggtc ctcgtcggct acgatgcggg cgatttcccc gagacggata gacgggccgt
     1441 ccacttcggc gtgctcgcgg aaacggatgg acaccgtgga tcccccgtcg gctccggaag
     1501 gcgccgccgc caggaccagg aggaggagga gcgccgtcat catgacctca gctggttcgc
     1561 catctgcagc atggagtcgg aagtctggat ggccttggcc gaaatctcat aggcgcgttg
     1621 ggcgacgatc atggcgacca tctcctccac gagctccacg ttcgaggatt cgaggaagcc
     1681 ctgcgccagg gtacccgtgc cgctggtgcc gggcatcacg gcctcgggtt cgccgctggc
     1741 ggaagtggcc tggtagaggt ttccgcccag gttcttgagg ccgccttcgt tcaggaactt
     1801 cacgatttcg atctgcccaa tctcctcctg ggccccggtc tcgttcaggg tcacggccac
     1861 acggccgttg gggtccacgg taagatcgcg ggcgccttgg ggaatgttga tctggggctc
     1921 gaggggaaag ccggaggagg tgaccagggt tccgtcggcg gcgaccttga gagaaccgtc
     1981 gcgagtgtat gccacttcgc cgctcgggag ctgcacctgc aggaacccct cgccggagat
     2041 ggccaggtcc atggggttct tggtctcggt aaggttgccc tgggcgaaga tcttctgggt
     2101 ggccgcgctg cgcacgccga ggcccacctg caggccggcc gggctcctgg agccatcgga
     2161 attgccggcc ccgggatcct gcatggtctg gtagaggagc tcctggaact ccagcttgga
     2221 cttcttatag cccgtggtgt tcacgttgga gaggttgttc gagatgttgt cgatatacag
     2281 ctggttcgcc ttcatcccgg tggcggctgt gtagaggctg cgaatcatgt ccttctccta
     2341 caatcagttc ccggcgcgcc c
//
LOCUS       DATGWW010000076         4712 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_95761, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000076 DATGWW010000000
VERSION     DATGWW010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4712
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95761"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VK150_01030"
     CDS             <1..244
                     /locus_tag="VK150_01030"
                     /inference="COORDINATES: protein motif:HMM:NF012626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29911.1"
                     /translation="PWPQKLINVKARDRKPVEACRDLLAAMASIEARWGDGVRQVVRW
                     SGTEPKLRLMVEAREEAWVEAALVELEAASRRDLAL"
     gene            246..1361
                     /gene="ftsW"
                     /locus_tag="VK150_01035"
     CDS             246..1361
                     /gene="ftsW"
                     /locus_tag="VK150_01035"
                     /inference="COORDINATES: protein motif:HMM:TIGR02614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HLP29912.1"
                     /translation="MAADVRRPVDRWLVLFALALVAMGMVWIYSASAIKASQNHAAAT
                     AFLTRQLVGGGIGIAFMLVLSQVDLATLQDHPRPLIAAYFVAVSLLVAVLLFGPKVNG
                     AHRWIRLGPMSLQPSELFKPLSVLIAASWMVRNREAWVSRRDALPKLLGLSGVLLVPL
                     ALILREPDFGTTFLIVFVTLMVVFLGGAPKWIFAVAIPLLGALGTAFVVFSPYRLARV
                     TSFLNPEADPLGKGHQALQSLVAVGNGGFMGVGLGGGKQKLFFLPEAHTDFIYAVIGE
                     ESGLIGTVAILALFVGILWRGYRIARRVGDSYLKLCAMGFVLLLVAQALMNMSVVLSL
                     APNKGIPLPFISFGPNSLITSLICLGLLLSISKDAST"
     gene            complement(1367..2536)
                     /locus_tag="VK150_01040"
     CDS             complement(1367..2536)
                     /locus_tag="VK150_01040"
                     /inference="COORDINATES: protein motif:HMM:NF021610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2344 domain-containing protein"
                     /protein_id="HLP29913.1"
                     /translation="MNRPGFASRMATDHYPEDVNDRALPPVIPAEALARRARLKAVLE
                     AMERGAPSLEAPCLQAFRTMLRNGAAVDADSVVEAVAAANLAEDAGEILRSSRREVSD
                     PAWFAGLSARLAPFIQVALQKRSALWHLDTRRTLVRFQFSKQGASLGFDEGDLQAILL
                     QAFRLEGFRVALDLGKRPHPLLTVGLPLPAQAGGEAEFADVVLRQEPAGAPGELTARL
                     NRRLPEGLQVQRWESLPVYAAPVADLARLSHWRWEVPSAHRARVEAAVARFNASATWP
                     WDRAGARAEAPLDLRSILGDLAWSGGALTFSSRMGEYLALNPLKALGAVTGLEAGQVA
                     GLVRAGVELKPDPRLAQAERFEPKLKNMYEDAVVLGAGSNIVLVDEDDDEPLRLG"
     gene            2786..3496
                     /locus_tag="VK150_01045"
     CDS             2786..3496
                     /locus_tag="VK150_01045"
                     /inference="COORDINATES: protein motif:HMM:NF018047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide kinase InaA family protein"
                     /protein_id="HLP29914.1"
                     /translation="MIHDPYIVPPLPDTWPFEPGRALHPLGCRVNLELPGFGGGWRVC
                     TPGGLVPSGEPVPLAGVFGRGGILRIGDMVLRPYRRGGLLRHINERTYRTHLRFAAEH
                     AVHRGLWEAGFPTVEPLGYAWRPSGFGVEGILITRMADGEPWPRRWDLSADRADEIRL
                     AIRSLCQWGLWSPDLNATNILLGSERGVFLLDWDRARFEPTGTDLWPRYRARLERSLR
                     KLGAPPEAFAVIGSASLP"
     gene            complement(3471..4049)
                     /locus_tag="VK150_01050"
     CDS             complement(3471..4049)
                     /locus_tag="VK150_01050"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HLP29915.1"
                     /translation="MRPLIAVLLSFAALGLGAAPKPKVKLTTSMGVIVMELEPEAAPK
                     TVENFLKYVKKGQYNGTIFHRVIADFMIQGGGYVDYLGKKRTDAAIPNEADRALAAGL
                     KNRRGTVAMARTPDPHSAAAEFFINVVNNPALDFKGKANDKTWGYCVFGKVVQGMDVV
                     DRIKAVKTSNKRSDFLNLPVKPVIITEATQIQ"
     gene            complement(4101..>4712)
                     /locus_tag="VK150_01055"
     CDS             complement(4101..>4712)
                     /locus_tag="VK150_01055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29916.1"
                     /translation="GQGLLDLLPRLLPEAPAKERPALRKAALAKVQPEAQPRAILQLL
                     PAKGGTPDDLLLRARAEAALEHWGPLRAALGGARPGAERIKALLRLLQRPINPPETEA
                     QRQAEAEGWLARAPEKGEIREPLAILVGDLRMQRGDVKGALAMYPAKAAVAEQRGWVA
                     LMRAQALLKVGQRDQAKDTLLLARYEQGFRAQRDALARTLGAY"
BASE COUNT          662 a         1688 c         1573 g          789 t
ORIGIN      
        1 cccctggccc cagaagctca tcaacgtgaa agcccgggac cgcaagccgg tcgaggcatg
       61 ccgggatctc ctggcggcca tggcctccat cgaggcccgc tggggcgacg gcgtgcgcca
      121 ggtggtgcgc tggtccggca ccgagcccaa gctgcggctc atggtggagg cccgggaaga
      181 agcctgggtg gaggcggcgc tggtcgagct ggaagcggcc tcccgccgcg acctggccct
      241 ctgacatggc cgcggatgtc cgccgccccg tggaccgctg gctggtgctc ttcgccctgg
      301 ccctggtggc catgggcatg gtgtggatct actcggcctc ggccatcaag gcctcgcaga
      361 accacgccgc ggccacggcc ttcctcaccc gccagctggt cggcggcggc atcggcatcg
      421 cattcatgct cgtcctctcc caggtggacc tggccaccct gcaggaccat ccccgcccgc
      481 tgatcgccgc ctacttcgtc gccgtctccc tgctcgtggc ggtgctcctc ttcggaccga
      541 aggtgaatgg cgcccaccgc tggatccgcc tcggccccat gagcctgcag ccctccgagc
      601 tgttcaagcc gctctcagtg ctgatcgcgg cctcctggat ggtgcggaac cgcgaggcct
      661 gggtgagccg gcgggacgcg cttccgaagc tgctgggcct ctccggggtg ctgctggtgc
      721 ccctggcgct catcctgcgc gaaccggatt tcggcaccac cttcctcatc gtgttcgtca
      781 ccctcatggt ggtatttctc gggggcgcgc cgaagtggat cttcgcggtg gcgatcccgc
      841 tgctgggcgc gctgggcacg gccttcgtgg tgttctcgcc ctaccgcctg gcccgcgtga
      901 cgagcttcct caaccccgag gcggatcccc tcggcaaggg ccaccaggcc ctgcagagcc
      961 tcgtggcggt gggcaacggc gggttcatgg gtgtgggatt ggggggcggc aagcagaagc
     1021 tcttcttcct gccggaggcc cacaccgatt tcatctacgc ggtcatcggg gaggagtccg
     1081 gcctcatcgg cacggtggcc attctcgcgc tgttcgtcgg catcctctgg cgcggctacc
     1141 gcatcgctcg gcgcgtgggc gacagctacc tgaagctctg cgccatgggc ttcgtgctgc
     1201 tgctggtcgc ccaggccctc atgaacatga gcgtggtgct ctccctggcg cccaacaagg
     1261 ggatccccct gcccttcatc tccttcggac ccaacagcct catcaccagc ctcatctgcc
     1321 tgggtctgct gctgtcgatc agcaaggacg cctcgacctg agcccctcaa cccaggcgca
     1381 gtggttcatc gtcatcctcg tcaacgagca cgatgttcga gcccgcgccc agcaccacgg
     1441 cgtcctcgta catgttcttg agcttgggct cgaaccgctc ggcctgggcc agacggggat
     1501 cgggcttaag ctccacccca gcccgcacca accctgcgac ctgacccgct tccaggcctg
     1561 tcaccgcgcc caaggccttc aggggattga gcgccaggta ctcgcccatg cggctggaga
     1621 aggtcagcgc gccgccggac caggccaggt cgccgagaat gctccggagg tccagggggg
     1681 cctccgccct ggcgccagcg cggtcccagg gccaggtcgc ggaggcattg aacctggcca
     1741 ccgccgcctc gacccgcgcc cggtgcgctg agggcacctc ccagcgccaa tgcgacaggc
     1801 gcgccaggtc ggccaccggc gcggcataca cgggcaggga ctcccagcgt tggacctgca
     1861 gcccctcggg cagtcgccgg ttcagccgtg cggtgagctc cccgggcgcg ccagcaggtt
     1921 cctgcctcag caccacatcc gcgaattcag cctcgccgcc ggcctgggcc ggcaaaggca
     1981 ggcccaccgt cagcagcggg tggggccgct tgccgagatc cagcgccacc cggaatccct
     2041 ccaggcggaa ggcctggagg aggatcgcct gcaggtcgcc ctcatcaaag ccgagcgacg
     2101 cgccctgttt ggagaactgg aagcggacca gtgtgcggcg ggtatcgagg tgccacaggg
     2161 ccgaacgctt ctgcagcgcc acctggatga agggcgccaa ccgggcggag aggcccgcga
     2221 accaggcggg gtccgacacc tccctgcgcg agctgcggag gatctcgccc gcgtcttcgg
     2281 cgagattcgc cgcggccacc gcttcgacca cggaatccgc gtccaccgcg gcgccgttcc
     2341 tcagcattgt ccggaaggcc tggagacacg gcgcttccag gcttggcgcg ccgcgttcca
     2401 tggcctcgag caccgccttc agccgcgccc gccgcgccag ggcttcggcg ggaatcactg
     2461 gagggagcgc gcgatcgttc acgtcttcag gatagtggtc cgtggccatc cgggaggcga
     2521 aaccgggcct gttcatccga aaaatcggaa aaaattggaa ggaaacattc ctgcccagtg
     2581 gcgatttcca catccactgt gggaagccga atcccagatt cagagaatgc ctttcatcac
     2641 aagccacttg ggtgcgtgcc cacttttcga ggcaggtgga catccgacgc gtgcggggca
     2701 ggaagtgttg acaggcgtcc ctgggttcgt tccgcctccg ccctttcctt cccggcccgg
     2761 acacgccaag ctgggaatca ccgccatgat ccacgatccc tacatcgtcc ccccgcttcc
     2821 cgacacctgg cccttcgagc ccggccgggc cctacatccg cttggttgcc gggtgaacct
     2881 ggagctgccc gggttcggcg gcggatggcg cgtgtgcacg ccgggcggac tggttccatc
     2941 cggcgagccc gttccgctcg ccggcgtctt cggccgcggc ggcatcctcc gcatcggcga
     3001 catggtcctc aggccctacc gtcggggcgg actgctccgc cacatcaacg agcgcaccta
     3061 tcggacccac ctgcgcttcg ccgctgagca tgcggttcac cgcggcctct gggaggcggg
     3121 attccccacg gtcgagcccc tggggtacgc ctggcgtccg agcgggtttg gggtggaagg
     3181 catcctcatc acccggatgg ccgacggcga gccctggccc cggcgctggg acctcagcgc
     3241 tgatcgcgcc gacgagatcc gcctggcgat ccgctcgctg tgccagtggg ggctctggtc
     3301 gcccgacctg aatgccacca acatcctgct cggctctgag cgcggcgtgt tcctgctgga
     3361 ctgggaccgg gcccggttcg agcccacggg cacggacctc tggccccgct accgcgcgcg
     3421 gctggagcgc agcctgcgca agctcggggc gccgccggaa gccttcgccg ttattggatc
     3481 tgcgtcgctt ccgtgatgat cacgggcttc acaggcaggt tcaggaagtc gctgcgcttg
     3541 ttgctcgtct tcacggcctt gatgcggtcc accacatcca tgccctgcac gaccttgccg
     3601 aagacgcagt agccccaggt cttgtcgttg gccttcccct tgaagtcgag ggcggggttg
     3661 ttcacgacgt tgatgaagaa ctcggcagcc gcgctgtggg gatccggcgt gcgcgccatg
     3721 gccacggtgc cacgccggtt cttcaacccc gccgccaggg cgcggtcggc ttcgttgggg
     3781 atggcggcat cggtgcgctt cttccccagg tagtccacgt acccgccgcc ctggatcatg
     3841 aaatccgcga tgacccgatg gaagatcgtg ccgttgtact ggcccttctt cacgtacttc
     3901 aggaagttct caacagtctt cggggcggcc tccggctcga gctccatcac gatcaccccc
     3961 atggaggtgg tcagcttcac cttcggtttg ggagcggctc cgaggccgag cgcggcgaag
     4021 gacagaagga cggcgatcag ggggcgcatc aggatctccg gggatgccca cagcataccc
     4081 ggacaacccc gcgggcctcc ctagtacgcc cccagggtcc gggccagggc gtcgcgctgg
     4141 gcccggaaac cctgctcgta gcgggccaag aggagggtgt ccttcgcctg gtcgcgctgg
     4201 cccaccttca ggagcgcctg cgcccgcatg agggccaccc agccacgctg ctccgccacg
     4261 gcggccttcg ccggatacat tgccagggcg cccttgacgt cgccgcgctg catccgcaaa
     4321 tcccccacca ggatggccag tggttcgcgg atctccccct tctccggtgc gcgggccagc
     4381 cagccctcgg cctcggcctg tcgctgggcc tcggtctccg gtgggttgat gggccgttgc
     4441 aggaggcgca gcagggcctt gatgcgctcg gcgcctggcc gtgctccgcc cagggcggcg
     4501 cggagggggc cccagtgttc cagggccgcc tcggcccgcg cgcggagaag cagatcgtcc
     4561 ggcgtgccgc ccttggcggg cagcagttgg aggatggccc ggggctgggc ttcgggctgc
     4621 accttggcca gagcggcctt gcggagggcg ggccgctcct tggccggggc ttcgggcagc
     4681 aggcgaggca ggaggtccag caggccctgg cc
//
LOCUS       DATGWW010000077         1694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_277389, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000077 DATGWW010000000
VERSION     DATGWW010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277389"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1160)
                     /locus_tag="VK150_01060"
     CDS             complement(<1..1160)
                     /locus_tag="VK150_01060"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29917.1"
                     /translation="MTLPRSTTLRLLAPGALAFLLACGGGGGASTPAKPAVTGPALTI
                     PPKAQAGYVGDQVTFRVAADGTGNAYQWFRNGVAISGATSDSYVLGVQAADDQARYSV
                     RVTGTAGGTTTSAEVLLDVLYADPAVAAGHDHALAITTKGKVYAWGVGGNGQLGLGDY
                     QARNVPTAVTLPGPAVKVAAGWGHSLALLADGRVFAWGNNASGQLGDGTTNMRNTPAA
                     VPGLTGVIYITCGYNHNLAVKSDQSMWVWGYNSHGQLGLGDKANRLAPTQSPISAQAL
                     ADATLGELHTLLVGLSGDLYGAGDNGYGQLGFPYSPTTEYLTFTQILGSGVKGARAFS
                     LQSVVLGTDGLPYGTGENVYGQLGDGSFTTRYGFVPMGTAGLTAGSTLDAVIP"
     gene            complement(1183..>1694)
                     /locus_tag="VK150_01065"
     CDS             complement(1183..>1694)
                     /locus_tag="VK150_01065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29918.1"
                     /translation="TCLVVASGKAQDLSRVRFLPLDGSAPTDVDAWAPGGTSETQAWI
                     VGDRLAHVAFDGTTYRLVSVDARGLGSRTHLEGAAMIFGQNPNGTGIRAGRMCFSRGA
                     ELHLLDPAGPAATLLRGGATPTYFAGWSRTRVLFSFQEGATYPLWSVRLDGTDLRRIS
                     PDASLVDVP"
BASE COUNT          234 a          566 c          663 g          231 t
ORIGIN      
        1 gggatgaccg catccagcgt gctgcccgcc gtgaggccgg cggtgcccat gggcacgaag
       61 ccgtagcggg tggtgaagct gccatcgccc agctgcccgt agacgttctc gccggtgccg
      121 taggggaggc cgtccgtgcc gaggaccacg gattgcaggg agaaggcccg cgcgcccttc
      181 acgccgctgc cgaggatctg ggtgaaggtc aggtactcgg tggtggggga gtaggggaag
      241 cccagctgac cgtagccgtt gtccccggca ccgtagaggt cgccgctcag gcccaccagc
      301 agggtgtgca gctcgcccag ggtggcgtcc gccagggcct gggcggagat ggggctctgg
      361 gtcggggcca gccggttggc cttgtcgccc aggcccagct ggccgtggga gttgtagccc
      421 cacacccaca tggattgatc ggatttcacc gccaggttgt ggttgtagcc gcaggtgatg
      481 tagatcacgc ccgtgaggcc gggcaccgcc gccggcgtgt tccgcatgtt ggtggtgccg
      541 tcgcccagct ggcccgaggc gttgttgccc caggcgaaga cccggccgtc ggccagcagc
      601 gccagggagt ggccccagcc cgccgccacc ttcaccgccg ggcccggcag ggtcacggcc
      661 gtgggcacgt tgcgggcctg gtagtcgccc agcccgagct gcccattacc gcccacgccc
      721 caggcgtaga ccttcccctt ggtggtgatg gcgagggcgt ggtcgtgccc cgccgccacg
      781 gcgggatcgg cgtacagcac gtccaggagg acctcggcgc tggtggtggt gccccccgcg
      841 gtgccggtca cccgcacgct gtagcgggcc tggtcgtccg cggcctgcac ccccagcacg
      901 tacgagtcgc tggtggcgcc gctgatggcc acgccgttcc gaaaccactg gtaggcgttg
      961 cccgtgccgt ccgccgccac ccggaaggtg acctggtcgc cgacgtagcc cgcctgcgcc
     1021 ttcgggggga tggtgagggc cgggccggtg accgcgggtt tggccggggt gctggcgccg
     1081 ccaccgccgc cgcaggccag gaggaaggcc agggcgccgg gggcgaggag gcggagggtg
     1141 gtggaacggg ggagggtcat gaaagctcct ggggaaaaag ggtcagggga catcgacgag
     1201 ggacgcgtcg gggctgatgc ggcggagatc cgtgccatcc aggcggacac tccagagggg
     1261 ataggtggcg ccttcctgga agctgaagag cacgcgggtg cgactccagc cggcgaagta
     1321 ggtcggagtg gcgccgccgc ggagcagggt cgcggccggg cccgcgggat ccagcaggtg
     1381 gagctccgcg ccgcgggaga agcacatccg ccccgcgcgg atcccggtgc cgttggggtt
     1441 ctggccgaag atcatggcgg ccccctccag gtgcgtcctg gagccgaggc cccgggcgtc
     1501 cacggacacg aggcggtacg tggtgccgtc gaaggccacg tgggccagcc ggtcgcccac
     1561 gatccaggcc tgggtctcgg acgttccgcc cggcgcccag gcgtccacat cggtgggagc
     1621 cgagccgtcc aggggcagga accgcacccg cgacaggtcc tgggccttgc ccgaggccac
     1681 caccaggcag gtcg
//
LOCUS       DATGWW010000078         1932 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_277395, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000078 DATGWW010000000
VERSION     DATGWW010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277395"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..1289
                     /gene="iadA"
                     /locus_tag="VK150_01070"
     CDS             123..1289
                     /gene="iadA"
                     /locus_tag="VK150_01070"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008798 - beta-aspartyl-peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HLP29919.1"
                     /translation="MLLLIKHANIFDPDAKGSCDILVGGGKILLMEPDIRVPRKHCEV
                     LEARNLNAVPGFIDGHVHIMGGGGEGGFATRTPDLPLTDAIYGGVTTVVGCLGTDGYT
                     RTMAGLLDKAKGLDEEGISTFVYSGSYGLPLRTLMPSLEEDLLFIEKVIGAGEVALSD
                     HRSSQPTFEAFAQVVAMARRGGMLSGKAGVVNVHLGDGARGLEFLRRILAETELSAAQ
                     MLPTHINRNPRLFEEGIAYAKGGGNVDFTTSTLPSYLEDGEIPCAKALRRMLDAGVDP
                     GRITFTSDGQGSLPDWDRHGRLQEISVGRVTSLFPAVRQAVQEEGIPLETALRVITSN
                     PARILKLKAKGRLAPGMDADLVLLDPKDLEVRTVIAKGRMLMKAGRLLAKGMFQ"
     gene            1286..>1932
                     /locus_tag="VK150_01075"
     CDS             1286..>1932
                     /locus_tag="VK150_01075"
                     /inference="COORDINATES: protein motif:HMM:NF015563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29920.1"
                     /translation="MKTAAPAPKAPGLKMPHTLVIVGALIVLVLILSWLVPSGEFQRI
                     EKVLPDGSRLKVPVDGTFQRLPKTYLGLQTLFLAPIKGFLDGAGLISFLLIIGGSFAI
                     FQETGAVEQGIKRLMVHVRRHPMLELLFIPVLMTVFSLAGAVFGMAEELIPFIVIFIA
                     LSRALGYDSIVGTSIPFLGAAAGFACAFFNPFTVGVAQGIAGVPIYSGLAYRMGA"
BASE COUNT          281 a          711 c          620 g          320 t
ORIGIN      
        1 gcctgctgta cgggctctac ggctatccgg gcttccgcga gctggccaag cccggtgccc
       61 tgctgcccgt ctcccgcgtc ttctgaacca gctcccggac ctgcggtccg gccggagttc
      121 ccatgctgct cctcatcaag cacgccaaca ttttcgaccc ggacgccaag ggttcctgcg
      181 acatcctcgt cggcggcggg aagatcctgc tcatggagcc cgacatccgc gtgcccagga
      241 agcactgcga ggtgctggaa gcccgcaacc tgaacgccgt gcccggcttc atcgacggcc
      301 atgtgcacat catgggcggc gggggcgagg ggggcttcgc cacccgtacg ccggacctgc
      361 ccctcacgga cgccatttac ggcggcgtga ccaccgtggt gggctgcctg ggcaccgacg
      421 gctacacccg gaccatggcc gggctgctgg acaaggccaa ggggttggac gaggagggga
      481 tcagcacctt cgtctactcg ggctcgtacg gcctgcccct gcgcaccctc atgcccagcc
      541 tcgaagagga cctgctcttc atcgagaagg tgatcggcgc gggcgaggtg gccctctccg
      601 accaccgctc aagccagccc accttcgagg ccttcgccca ggtggtggcc atggcgcgcc
      661 ggggcggcat gctgtcgggc aaggcgggcg tcgttaatgt ccacctgggg gacggggcgc
      721 ggggcctcga gttcctccgg cgcatcctgg cggagacgga gctctccgcc gcccagatgc
      781 tgcccaccca catcaaccgg aacccgcgcc tcttcgagga gggcatcgcc tacgccaagg
      841 gcggcggcaa cgtggacttc accacctcca ccctgccctc gtacctggag gacggcgaga
      901 tcccctgcgc caaggccttg cgccgcatgc tggatgccgg agtggatcca gggcgcatca
      961 ccttcacctc cgacgggcag ggcagcctgc ccgactggga tcgccacggc cgcctgcagg
     1021 agatctccgt gggccgggtc acctcgctct tccctgcggt ccgccaggcc gtgcaggagg
     1081 agggcatccc cctggagacg gcgctgcggg tgatcacctc gaaccccgcc cgcatcctga
     1141 agctgaaggc caagggccgc ctggcaccag gcatggacgc cgacctggtg ctgctggacc
     1201 ccaaggacct cgaggtccgc acggtcatcg ccaaggggcg catgctcatg aaggccggac
     1261 ggctgctcgc caaggggatg ttccagtgaa gaccgccgca cccgcgccga aggcgcccgg
     1321 cctgaagatg ccccacaccc tcgtcatcgt gggggcgctc atcgtgctgg tgctgatcct
     1381 ctcctggctc gtgccctcgg gcgagttcca gcgcatcgag aaggtgctgc ccgacggcag
     1441 ccggctcaag gtgcccgtgg acggcacctt ccagcgcctc cccaagacct acctgggcct
     1501 gcagaccctc ttcctggcgc ccatcaaggg cttccttgac ggcgcgggcc tcatctcctt
     1561 cctgctcatc atcgggggca gcttcgccat cttccaggag accggcgccg tggagcaggg
     1621 catcaagcgg ctcatggtgc atgtgcggcg ccaccccatg ctggagctgc tcttcatccc
     1681 ggtgctgatg acggtgttct ccctggccgg cgccgtcttc ggcatggccg aagaactgat
     1741 ccccttcatc gtcatcttca tcgccctgtc ccgggcgctc ggctacgact ccatcgtggg
     1801 caccagcatc cccttcctgg gcgccgccgc gggctttgcc tgcgccttct tcaacccctt
     1861 caccgtgggc gtggcccagg gcatcgcggg cgtgcccatc tactcgggcc tggcgtaccg
     1921 catgggcgcc tg
//
LOCUS       DATGWW010000079         1769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_232120, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000079 DATGWW010000000
VERSION     DATGWW010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_232120"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            274..633
                     /locus_tag="VK150_01080"
     CDS             274..633
                     /locus_tag="VK150_01080"
                     /inference="COORDINATES: protein motif:HMM:TIGR00377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HLP29921.1"
                     /translation="MADLSIAVRQAGDVAVLLPAGFINAHTVREFEEALEGLVQDGRY
                     TILLNCKELNYISSAGLGAIMGLIETVREHGGDILLSNLQDNVFAIFDTLGFTQLYRV
                     FPDEDRALAAAAPGQKG"
     gene            648..1073
                     /locus_tag="VK150_01085"
     CDS             648..1073
                     /locus_tag="VK150_01085"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP29922.1"
                     /translation="MDHAQFRLVIPSQTRYLNLVTGLAKRASLVAGLDDATAAKVSIA
                     VDEAVTNVILHAYHGEGEHSVELELRFTEVALEIHIWHSGQGIRGDQLVLPDPKEYIK
                     HPRKGGLGLLLMSRFMDEVQFKADETSGRNECCLIKKIS"
     gene            1093..>1769
                     /locus_tag="VK150_01090"
     CDS             1093..>1769
                     /locus_tag="VK150_01090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29923.1"
                     /translation="MAINPFDRLRQLALKIPEGAQELLPLIDFLETFPEQGDEEDLVH
                     LVGITAMGIAKARQGGLWSGSKWLFLRGSAPAFPTHPGEGWQVLPWQYGDELYGHLVL
                     KAVDLPAAVPLLLSISAPLLAWRRAEAVRSSQNQALALQLSRLNTVFELTRNLGEVET
                     RHDLVRLMANTLMGEFRIMRLLVVDAQGQVLHAKGLGTLPESLEGERLHEVVQARGLV
                     HAVELVD"
BASE COUNT          289 a          588 c          600 g          292 t
ORIGIN      
        1 tggccgagga gggcctcgtc ggggcggaag tgccccaggg cgtgctgcca ggtggccatg
       61 acctcctcga ggagggtctg gttcttctgg ttgagccagg cctccaggcg ggccttgagg
      121 gcatcgtctt ggggcggatc cgcaggtcgg gggtcgctca tcgggggctc ggcaaggttg
      181 gagtcaaggg tatcccattc ccgccctttc cccgcgcgct ggcaaatgtt ccggggaacc
      241 gataggatgg cccaggttcc ttggagtcgg cgaatggcag atctttccat tgcggtaagg
      301 caggccggtg acgtggcggt gctgttgccc gccgggttca tcaatgccca taccgtccgg
      361 gaattcgagg aagccctgga gggactggtc caggacgggc gctacaccat cctgctcaac
      421 tgcaaggagc tgaactacat cagctctgca ggactcgggg ccatcatggg cctcatcgag
      481 accgtccggg agcacggagg cgacatcctc ctgtccaacc tgcaggacaa cgtgttcgcc
      541 atcttcgaca cccttggctt cacccagctc taccgggtgt tcccggacga ggaccgggca
      601 ttggcggcgg ccgcgccggg gcagaagggc tgagggtggc ggcgaaaatg gaccacgccc
      661 agttccggct cgtcatcccg agccagaccc ggtatctgaa cctcgtcacg ggtctggcca
      721 agcgcgcctc cctggtggcg gggctcgacg acgccacagc ggccaaggtg agcatcgccg
      781 tggacgaggc ggtgaccaac gtcatcctcc acgcctatca cggtgagggc gagcacagcg
      841 tcgagctgga gctgcgcttc accgaggtgg ccctcgagat ccacatctgg cactccgggc
      901 agggcattcg cggcgaccag ctggtgctcc ccgatcccaa ggaatacatc aagcaccccc
      961 ggaaaggcgg cctgggcctc ctgctcatga gccggttcat ggatgaagtc cagttcaagg
     1021 cggacgagac ctccggccgc aacgagtgct gcctgatcaa gaagatcagc tgaaccgtcc
     1081 agttcgacgc ccatggccat caacccgttc gaccgtcttc gccagctggc gctgaagatc
     1141 cctgaagggg cgcaggagct gctgcccctc atcgacttcc tggagacctt cccggagcag
     1201 ggcgacgagg aggacctggt ccacctcgtg ggcatcacgg ccatgggcat cgccaaggcg
     1261 cgtcagggcg gcctctggag cggctcgaag tggctcttcc tgcgcggctc ggcgcccgcc
     1321 ttccccaccc atcccggcga gggctggcag gtgctgccct ggcagtacgg ggacgagctg
     1381 tacggccatc tggtgctcaa ggcggtggat ctgcccgccg ccgtgcccct gctgctctcc
     1441 atcagtgccc cgctgctggc ctggcgccgg gcggaagcgg tccgcagctc ccagaaccag
     1501 gccctggccc tgcagctttc ccggctcaac accgtgttcg agctcacccg caacctgggc
     1561 gaagtcgaga cgcggcacga cctcgtgcgc ctcatggcga acaccctcat gggcgagttc
     1621 cgcatcatgc gcctgctggt ggtggacgcc cagggccagg tcctccacgc caagggcctg
     1681 gggacgctac ccgagtcgct ggagggggag cgcctgcacg aggtggtcca ggcccggggg
     1741 ctcgtccacg cggtggagct ggtggacca
//
LOCUS       DATGWW010000080         1641 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_365141, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000080 DATGWW010000000
VERSION     DATGWW010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_365141"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1641)
                     /locus_tag="VK150_01095"
                     /pseudo
     CDS             complement(1..1641)
                     /locus_tag="VK150_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014427354.1"
                     /note="internal stop; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
BASE COUNT          219 a          510 c          595 g          317 t
ORIGIN      
        1 gggtcaacgt gttgacgaga tagccgggct tggccacgcc gacaaagccc cagtggttgg
       61 gcaggcccac ggtgtgcacg cgcttgccgt cgacgtccag cgaggcgatg cgcttggtga
      121 cgacggccac ggccttgatg aagccgcggt tgctcgtcac cttgacccag tcgccgttgg
      181 ccacgccctt ctccttggcc agctcctcgc cgatctcgac gaactgctgc ggctgcacga
      241 tggccgaggt gcgcacgttc ttggtccagt agtggaagtg ctcggtcagc cggtagctgg
      301 tggccacgta ggggaagtcc ttgggcttgc cgaaggcctc catgtcgctc ttgaagacgc
      361 gcgcggccgg gttggacttg gccttggcgt tgttcgggtg catggggttg gccggcagcg
      421 gcgactcgaa gggctcgtag tgctcgggca gcgggccgtc caccatgccg ctcggcgcga
      481 agaggcgggc cacgccttcc gaggtcatga tgaagggccg cacggcatcg gcgtccgtcg
      541 ggttggcatc gggccggatg tcgggcacgt cggagccgcc ccacttctcg ccgttccagg
      601 ccaccagccg gcgcttggcg ttccagggct tgccagtggg gtcgcaggag gccgcgttgt
      661 agagcacgcg ccggttcgcc ggccaggccc aggcccagtt cagcgtctgg ccgatgccgt
      721 aggggtcggc gttgtcgcgg cgggccatct ggttgccggc ctgggtccag gcgccggagt
      781 agatccagca gccgcaggac gtggagccgt cgtcgcgcaa ctggccgaag ccggcgagct
      841 gctcgccggc cttgaccagc accttggtcg ggtccttggg gtcggtgacg tcggccaggg
      901 ccttgccgtt gtactccttg gccagctcct cggccgaggg gttggtgggc tgcaggtagg
      961 gccaggtgag gttgaggatg ggatcgggga aggcgccgcc ttccttggcg taggcggccc
     1021 gcatgcgggt gaacagctgg gcgatgatct ccgggtcgcc cttggcctcg cccgggggct
     1081 cggcgccctt ccagtgccac tgcagccagc ggccggagtt ggtgagctag ccgtcctcct
     1141 cggcgaagca ggtgctcggg aagcggatga ccgtcgtctg gatctcctcg ctcttcacgt
     1201 catggtgctc gccgtggttc ttccagaact cggcagtctc ggtgttgagc gggtcgatga
     1261 cgacgaggaa cttcagtttg gacagcccgt cgacgacctt cttcttgttc gggaagctgc
     1321 ccaccgggtt gaagccctgg cagatgtagc cgttgagctt gccctggttc atcagctcga
     1381 aggtctgcag gacgtcgtag cccttgtccc acttgggcag gtagtggaag gcccactcgt
     1441 tctcggccgt cgcggccttg ccccaccagg ccttctgctg gctcacgaag aacttggggt
     1501 agttctgcca gaagctcatc tgccccggcc gcaggggctt gagggcgcgg gtcttgtagt
     1561 aggtgtcgag gtcctgctcg ccgtcgcggg ccaggctcat ataacccgtc agcgacgtgg
     1621 acagcaggcc caggtcggtc a
//
LOCUS       DATGWW010000081         1928 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_319562, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000081 DATGWW010000000
VERSION     DATGWW010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1928
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319562"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1037
                     /locus_tag="VK150_01100"
     CDS             <1..1037
                     /locus_tag="VK150_01100"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HLP29924.1"
                     /translation="VWKRDEEHAPWSKAQLEGWISQDTIWACTSCGYCEWACPLQITF
                     VDKLVGMRRYLTLEESNFPAEAQTAFKGMERQGNPWNLPQADRAKWADGLHVPTIAEN
                     PDAEYLFWVGCAGSYDAAGQKVSQALVKLLKAANVSFAILGTEESCTCESARRLGNEY
                     LFQTATETNVELLKGHGVKKVITNCPHCMNTLRNEYPAFGGDFEVVHGTELVAKLISE
                     GKLKLEQTVDVDLTYHDPCYLSRINGQVEAPRAILDAIPGVKLTEMEKHGEATMCCGA
                     GGGRFWLEEHLGKRVNHERFEQALETKATTIAVGCPFCNVMLSNAAGETGHEGVATTD
                     VLELAAKALK"
     gene            1100..1267
                     /locus_tag="VK150_01105"
     CDS             1100..1267
                     /locus_tag="VK150_01105"
                     /inference="COORDINATES: protein motif:HMM:NF015899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HLP29925.1"
                     /translation="MPLDPRLLEILCCPACHGDVVERADGLHCQACGLLYPIEDGIPV
                     MLVDAARQVGK"
     gene            1264..>1928
                     /locus_tag="VK150_01110"
     CDS             1264..>1928
                     /locus_tag="VK150_01110"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HLP29926.1"
                     /translation="MRLDRAQAESLLRRMEGRKVAVLGDVMLDEYLFGEVNRISPEAP
                     VPIVRVLRERAVLGGAANVAANLKALGAEPMLIGTLQKDSAGDRLLGLLGGLGVSISG
                     LVLDTSRPTTIKTRVIGQQQQMLRIDREESGTPDAAVLMGLKDRLERALGEASALIVS
                     DYAKGTVNEPVMDAVRSLCAARNLPWIVDPKPAHKALYRGATLMTPNIKETSELTGRT
                     ARS"
BASE COUNT          338 a          678 c          636 g          276 t
ORIGIN      
        1 ccgtgtggaa gcgcgacgag gagcacgccc cctggagcaa ggcgcagctg gagggctgga
       61 tcagccagga caccatctgg gcctgtacca gctgcggcta ctgcgagtgg gcctgccccc
      121 tgcagatcac cttcgtggac aagctcgtgg gcatgcgccg ctacctcacg ctggaggaga
      181 gcaacttccc ggcggaggcg cagaccgcct tcaagggcat ggagcggcag ggcaacccct
      241 ggaacctccc ccaggccgac cgcgccaagt gggccgatgg cctgcacgtg cccaccatcg
      301 ccgagaaccc cgatgccgag tacctgttct gggtgggctg cgcgggttcc tacgatgccg
      361 cgggccagaa ggtctcccag gccctggtga agctgctgaa ggccgccaat gtgtctttcg
      421 ccatcctcgg cacggaggag agctgcacct gcgaatcagc ccgacgcctg ggcaacgagt
      481 acctcttcca gaccgccacg gaaacgaacg tggagctgct caagggccac ggcgtgaaga
      541 aggtcatcac caactgcccc cactgcatga acacgctgag gaacgagtac ccggccttcg
      601 gcggcgactt tgaggtggtg cacggcaccg agctggtggc gaagctcatc agcgaaggca
      661 agctgaagct ggaacagacc gtggacgtgg acctcaccta ccacgatccc tgctacctca
      721 gccgcatcaa cggccaggtg gaagcacccc gcgccatcct cgacgccatc cccggcgtga
      781 agctcacgga gatggaaaag cacggcgagg ccaccatgtg ctgcggcgcc ggcggcggcc
      841 gcttctggct ggaggaacac ctgggcaagc gcgtgaacca cgagcgcttc gaacaggccc
      901 tggaaaccaa ggccaccacc atcgccgtgg gctgcccctt ctgcaacgtc atgctgagca
      961 acgccgccgg tgagaccggc catgagggcg tggccaccac tgacgtgctg gagctggcgg
     1021 cgaaggcgct caagtagcgg cagggcctcc ggggtgtttt ccccgagcat cccgggccca
     1081 cagctgctag cttttcccca tgccgctcga tccccgcctc cttgagatcc tctgttgtcc
     1141 cgcctgccac ggagacgtgg tggagcgggc cgacggcctg cactgccagg cctgcgggct
     1201 gctctacccc atcgaggacg gcatccccgt gatgctggtg gatgccgccc ggcaggtggg
     1261 gaaatgaggc tcgaccgggc ccaggccgag tcgctgctgc gccgcatgga gggccggaag
     1321 gtcgccgtgc tgggtgacgt gatgctggac gagtacctct tcggcgaagt gaaccgcatc
     1381 tctcccgagg cgcccgtgcc catcgtccgg gtgctgcggg agcgggcggt gctgggcggc
     1441 gcggccaacg tggcggccaa cctcaaggcc ctcggcgccg agcccatgct catcggcacc
     1501 ctgcagaagg attccgccgg ggaccgcctg ctgggcctgc tgggaggcct cggcgtctcc
     1561 atctccggcc tggtgctcga tacctcccgc cccaccacca tcaagacccg ggtcatcggc
     1621 cagcagcagc agatgctccg catcgaccgc gaagagtcgg gcacgccgga cgccgccgtg
     1681 ctgatgggcc tgaaggaccg cctcgagcgg gccctgggcg aggcctctgc cctcatcgtc
     1741 tctgactacg cgaaaggcac cgttaacgag cccgtgatgg acgcggtgcg cagcctctgc
     1801 gccgcccgga acctgccctg gatcgtggat cccaagccgg cccacaaggc gctctaccgc
     1861 ggcgccaccc tgatgacgcc caacatcaag gagacctcgg aactcaccgg ccgcacggcg
     1921 cgctccga
//
LOCUS       DATGWW010000082         4723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_52098, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000082 DATGWW010000000
VERSION     DATGWW010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4723
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52098"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..633)
                     /locus_tag="VK150_01115"
     CDS             complement(<1..633)
                     /locus_tag="VK150_01115"
                     /inference="COORDINATES: protein motif:HMM:NF021364.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding domain-containing protein"
                     /protein_id="HLP29927.1"
                     /translation="MPDSRTLRLQRAMAAFVLDADDAAFEVDPGRPARRQDLSGDDQR
                     AFREQGPALMTYRELARTSLVEPLEDMFPILKALLEKTGAWEACIQAFLDARVVRSPH
                     YRDIAPSFLGWLAETRWGQDRWPFLLELAHAEILEVLVARYPDEESPAGLHAEPGPGD
                     LVVLAGPTQVVSYGHAVHRSRVDTPVPEARPTHLLAFRDPEGDARLMDLTP"
     gene            complement(626..1477)
                     /locus_tag="VK150_01120"
     CDS             complement(626..1477)
                     /locus_tag="VK150_01120"
                     /inference="COORDINATES: protein motif:HMM:NF003818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HLP29928.1"
                     /translation="MTQDRFTGVGLGLRRPHLDEVARRAEHGVPFWETCPENVVGDGG
                     RQHRLACAILDRDPVLTHGLAMSVGGFDPWDDEYLHGLGAFLLRTGTPWHSEHLCFTS
                     VDASHLHELLPLPFTREAARHTIARARDLQARLPVPLLLENITYYAELGAAEMDEADF
                     ITAVLEGADVGWLLDVNNVYVNALNFGFDPKAWLDRMPLDRVAQIHIAGHKRFGDLTV
                     DTHGAEVIDPVIELMQWTLQRLGRPVPVLLERDNHIPDLDRLLAERMRLQEAYDAALA
                     PSGVRHA"
     gene            complement(1499..1831)
                     /locus_tag="VK150_01125"
     CDS             complement(1499..1831)
                     /locus_tag="VK150_01125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29929.1"
                     /translation="MITKLIGAATLFTAGSLMAGPATLGAAPVEAFGAEAAFTQAGEC
                     GAKDAKEEGKAPAKDAKAKHAKAKDGSCGKGSCGSKDMKKDKKDGSCGKDKKEGSCGK
                     GKKEAEKK"
     gene            complement(1987..2370)
                     /locus_tag="VK150_01130"
     CDS             complement(1987..2370)
                     /locus_tag="VK150_01130"
                     /inference="COORDINATES: protein motif:HMM:NF016056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DCC1-like thiol-disulfide oxidoreductase family
                     protein"
                     /protein_id="HLP29930.1"
                     /translation="MTRLFYDGACGFCRGWVRFVARRDAGGRIRFAPLGGETFARLVQ
                     ADRAVELQDTLVVLTPEGRLLVRSEAVLHLLEVLGGRWRRAGRLLARVPRPLRDGIYR
                     LVARLRPRTAACPAAPRGGDGRFEP"
     gene            complement(2367..2636)
                     /locus_tag="VK150_01135"
     CDS             complement(2367..2636)
                     /locus_tag="VK150_01135"
                     /inference="COORDINATES: protein motif:HMM:NF013346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM165/GDT1 family protein"
                     /protein_id="HLP29931.1"
                     /translation="MNRSLFWTTFATVFLAEVGDKTQLAAMTATVRSGQIWTVFLAAS
                     AALVCATAIGVMVGGVLFKYIPEAAIKWTAGCAFIAVGLWVLIKG"
     gene            2704..3651
                     /locus_tag="VK150_01140"
     CDS             2704..3651
                     /locus_tag="VK150_01140"
                     /inference="COORDINATES: protein motif:HMM:NF013755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29932.1"
                     /translation="MALDHFDLPTTFVDTPEKLQEALPLWHAAGVLSVDIECSLTGMH
                     HCVLALIQVATHDQAWLVDPLALGDLTKPALQAMAQVPWIVHDFSGDGIVFKRIYDVV
                     PDSIFDTMLLSRALGYPQPGLKTMAKLKLGIDIPKEEQDSNWMLRPLRDAQISYASRD
                     AALLLPLLRTLADEADTRRDHPEIGPRLAALPKEMRHLLKRVRAYVPPKHDPVVDKVR
                     HLGDLAVERALKLTALRWAWGNEGDVAAVMELGNRWLTARLTHPPATKEALERTIPNP
                     RFRRKRLDALWAVFAEGAHETQENGDASDGLIWNNPGRP"
     gene            3648..4067
                     /locus_tag="VK150_01145"
     CDS             3648..4067
                     /locus_tag="VK150_01145"
                     /inference="COORDINATES: protein motif:HMM:NF014660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HLP29933.1"
                     /translation="MTHDPNPAPADDGVLLTFPKGLVGFPQHKTFRLFEPNDGYPLKF
                     LQSVDAQDVSFTCIDPVSIKQDYEVPLGAEDSEALRLESPEDAMVLTLVVIPDDARQM
                     TTNLAGPLVINAKTKIGYQIVLNTETYPLRFPILTKD"
     gene            4089..4340
                     /gene="csrA"
                     /locus_tag="VK150_01150"
     CDS             4089..4340
                     /gene="csrA"
                     /locus_tag="VK150_01150"
                     /inference="COORDINATES: protein motif:HMM:TIGR00202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006109 - regulation of carbohydrate
                     metabolic process [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HLP29934.1"
                     /translation="MLVITRKPEQSIVIGGEVEVVVLGISKDGVRLGIKAPRSVQVHR
                     REVFDAIAAENKAATATRVPLQDAAALLRAAQGNPKKDR"
     gene            4358..4531
                     /locus_tag="VK150_01155"
     CDS             4358..4531
                     /locus_tag="VK150_01155"
                     /inference="COORDINATES: protein motif:HMM:NF025436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfB family protein"
                     /protein_id="HLP29935.1"
                     /translation="MDVSPASVVAMQQRNTQMQYATSVLRKAIDIQAEQGAALAKLVA
                     EQAGVGQRVDQYA"
BASE COUNT          748 a         1682 c         1574 g          719 t
ORIGIN      
        1 gggggtgaga tccatcaacc tggcgtcacc ttcgggatcg cggaacgcca gcagatgggt
       61 gggtcgcgct tcgggcaccg gtgtgtcgac gcgggatcgg tggaccgcgt ggccgtacga
      121 cacgacctgg gtggggcccg ccaggacgac gaggtcgccc ggtcccggct cggcgtgcag
      181 cccggcggga gattcctcat ccgggtaccg cgccacaagc acttccagga tctcggcatg
      241 ggccagctcg aggaggaagg gccagcggtc ctgcccccag cgggtctccg ccagccagcc
      301 caggaaggac ggggcgatgt cccggtagtg cgggctgcgc accacccggg cgtcgaggaa
      361 ggcctggatg caggcctccc aggcgcctgt cttttccagc agggccttca ggatcgggaa
      421 catgtcctcc agcggctcca ccaggctcgt gcgggccagc tcgcggtagg tcatgagggc
      481 ggggccctgc tcgcggaagg ccctctggtc gtcgccggag aggtcctggc ggcgggcggg
      541 ccggccggga tcgacctcga aggcggcgtc gtccgcgtcg agcacgaagg cggccatcgc
      601 acgctggaga cggagggtcc gcgaatcagg catggcgcac cccgctgggg gcgagcgccg
      661 cgtcataggc ttcctggagg cgcatgcgct cggccagcag ccggtccagg tcgggaatgt
      721 ggttgtcccg ctccagcagg accggcacgg gccgccccag gcgctggagg gtccactgca
      781 tcagctcgat gaccgggtcg atgacctcgg cgccatgggt atccaccgtg aggtcgccga
      841 accgcttgtg ccccgcgatg tggatctggg ccacgcggtc caggggcatc cggtccagcc
      901 aggctttggg gtcgaacccg aagttgaggg cgttcacgta cacgttgttc acatccagca
      961 gccagcccac atccgcgcct tcgagcaccg ccgtgatgaa gtccgcctcg tccatctcgg
     1021 cggcgcccag ctcggcgtag tacgtgatgt tctccagcag gaggggcacg ggcaggcggg
     1081 cctggaggtc ccgggcccgg gcgatggtgt gccgcgccgc ctcccgggtg aaggggaggg
     1141 gcagcagctc gtggaggtgg ctggcatcca cgctcgtgaa gcagaggtgc tcggagtgcc
     1201 agggcgtgcc ggtgcggagg aggaacgcac ccaggccgtg gaggtactcg tcgtcccagg
     1261 ggtcgaaccc acccacggac atggccagcc cgtgggtgag caccggatcc cggtcgagga
     1321 tggcacaagc gagccggtgc tgccggccgc catccccgac cacgttctca ggacacgtct
     1381 cccagaaggg gacgccgtgc tccgcccgcc gcgccacctc gtcgaggtgc ggcctgcgga
     1441 ggcccagccc cacgccggtg aacctgtcct gagtcatggt catcctccgc ccccgggcct
     1501 acttcttctc ggcttccttc ttgcctttgc cgcaggagcc ttccttcttg tccttgccgc
     1561 aggaaccgtc cttcttgtcc ttcttcatgt ccttgctgcc gcaggagccc ttgccgcagg
     1621 agccgtcctt ggccttggcg tgcttggcct tcgcatcctt ggcgggggcc ttgccctctt
     1681 ccttcgcgtc cttggcgcca cactcgcccg cctgggtgaa ggcggcttcg gcaccgaacg
     1741 cttcgacggg ggcggcgccc agggtggcgg ggccggccat gagggaacca gccgtgaaga
     1801 gggtggcggc gccgatgagc ttcgtgatca tggtttctcc gagcggcaga gccgcgctgg
     1861 gggccgcgcg gcggccccgg ggttggaaca ggacaggaac ctgccgggct ttgcctggca
     1921 ggaccgcggt gctgttgtta accctttcgg tgcggaggca tccggctttg tgacattttt
     1981 ttgcgtctat ggctcaaagc gcccgtcccc tccccgcggg gccgcggggc aggccgctgt
     2041 cctcggccgc aggcgcgcca ccagccggta gatgccgtcg cgcaggggtc tcggcacccg
     2101 ggccagcagg cggcccgccc ggcgccacct tcctcccaga acctcaagca gatgcaggac
     2161 cgcctcggag cgcaccagga gccggccctc cggcgtgagc accaccagcg tgtcctggag
     2221 ctccaccgcc cgatcggcct gcaccagtcg ggcgaaggtc tcgccgccca agggtgcgaa
     2281 gcggatccgg cccccggcat cccgccgggc gacgaaccgc acccagccgc gacagaagcc
     2341 gcaggctccg tcgtagaaga gccgggtcac cccttgatca gcacccacag acccaccgcg
     2401 atgaacgcgc atcccgcggt ccacttgatg gccgcctcgg ggatgtactt gaacagcacg
     2461 ccgcccacca tcacgccgat ggccgtggcg cacaccaggg ccgcgctggc ggccaggaag
     2521 acggtccaga tctggccgct gcgcacggtg gcggtcatcg ccgccagctg cgtcttgtcg
     2581 cccacttcgg cgaggaagac ggtggcgaag gtggtccaga agagcgagcg gttcatggga
     2641 ttccccggaa ggccttggtg actcttaagc ctaatggagg atcatctgcg gcacactggt
     2701 tggatggcgc tcgatcactt cgaccttccc acgaccttcg tggatacccc cgagaagctg
     2761 caggaggcgt tgcccctgtg gcacgcggcg ggcgtgctgt ccgtcgacat cgaatgcagc
     2821 ctcaccggca tgcaccactg cgtgctcgcc ctgatccagg tggccaccca cgaccaggcc
     2881 tggctggtgg atccgctggc cctgggcgac ctcacgaagc ccgccctgca ggccatggcg
     2941 caggtgccct ggatcgtcca cgacttctcc ggcgacggca tcgtcttcaa gcgcatctac
     3001 gacgtggtgc ccgacagcat cttcgacacc atgctgctct cccgcgccct gggctacccc
     3061 cagccgggcc tcaagacgat ggccaagctc aagctgggca tcgacatccc caaagaggag
     3121 caggactcca actggatgct ccgtcccctg cgcgacgccc agatcagcta cgccagccgc
     3181 gacgcggccc tgctgctgcc cctgctccgc accctggccg acgaggccga cacccggcgg
     3241 gatcaccccg agatcggtcc gcgcctggcg gccctcccca aggagatgcg ccacctcctc
     3301 aagcgggtcc gcgcctatgt gccccccaag cacgacccgg tggtggacaa ggtccggcac
     3361 ctgggcgacc tggcggtgga gcgggccctg aagctcacgg cgctgcgctg ggcctggggc
     3421 aacgaaggcg acgtggccgc ggtgatggaa ctgggcaacc gctggctcac ggcccgcctg
     3481 acccacccgc ccgccaccaa ggaggccctg gagcggacca tccccaatcc ccgcttccgg
     3541 cgcaagcggc tggacgccct gtgggccgtc ttcgcggaag gcgcccatga aactcaggaa
     3601 aacggggatg cgtccgatgg gttgatctgg aacaaccctg gacgcccatg acccacgatc
     3661 cgaaccccgc ccccgccgat gatggcgtcc tcctgacctt tcccaagggc ctggtgggct
     3721 tcccccagca caagaccttc cgcctcttcg agcccaacga cggctacccg ctgaaattcc
     3781 tccagtcggt ggacgcccag gacgtttcct tcacctgcat cgatccggtc agcatcaagc
     3841 aggactacga agtgccgctg ggcgctgagg actccgaggc cctccgcctg gagtcccctg
     3901 aggacgccat ggtgctcacc ctggtggtga ttcccgacga cgcgcggcag atgaccacga
     3961 acctcgccgg gcccctggtg atcaacgcca agaccaagat cggctaccag atcgtcctga
     4021 ataccgagac ctaccctctg cgattcccga tcctcaccaa ggactgatct gtctggtagc
     4081 ctgcgaacat gcttgtcatc accagaaagc cggagcagtc catcgtcatc gggggcgagg
     4141 tcgaggtcgt cgtcctcggc atcagcaagg atggcgtgcg gctgggcatc aaggccccgc
     4201 ggagcgtcca agtccaccgc cgcgaagtgt tcgatgccat cgccgccgag aacaaggctg
     4261 ccacggccac ccgggtgccc ctccaggacg ccgccgccct gctccgggcc gctcaaggga
     4321 atcccaagaa ggaccgatag gccctgaaga ggtaccgatg gacgtctccc ccgccagcgt
     4381 cgtggccatg cagcagcgca acacccagat gcagtacgcg accagcgtgc tgcgcaaggc
     4441 catcgacatc caggctgagc aaggcgccgc gctcgccaag ctcgtggccg agcaagccgg
     4501 cgtgggccag cgggtcgatc agtacgcctg agcattctgc ctcgcaggtc cagcggcgcc
     4561 tcgcaaggaa ccacggcggt gcgcctgggg cgaatcctga cgtgcccggg ggcgtacgat
     4621 tggagttcac ctcacgcccc gggatagtct gaggatcgcg tccccccacc gcctggagcc
     4681 caccccatgc tgtcccgcct cctgacgccg ctcgtggcgg cgg
//
LOCUS       DATGWW010000083         2591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_96351, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000083 DATGWW010000000
VERSION     DATGWW010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96351"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VK150_01160"
     CDS             <1..190
                     /locus_tag="VK150_01160"
                     /inference="COORDINATES: protein motif:HMM:NF013440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GreA/GreB family elongation factor"
                     /protein_id="HLP29936.1"
                     /translation="TYTIVGEDEADPALGKLSWASPLAEALLHAEPGDEVVWRRPAGT
                     KRLEILAIRPGQGEGAGA"
     gene            complement(187..675)
                     /locus_tag="VK150_01165"
     CDS             complement(187..675)
                     /locus_tag="VK150_01165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29937.1"
                     /translation="MIHHISIPARDPRHVAQVLAELLQGYAGPFIGPIPGAWVVYAED
                     VSGTGIEVYPEATVLVPGVGDGMGEAALREAPPAVAFHALISVPVDRAVIESIGAREG
                     WRTRHFWRGPNPQVRLFELYEFWVENRVMLELVTEDMVPAYQRLANGAAQRELLARRE
                     AR"
     gene            822..1247
                     /locus_tag="VK150_01170"
     CDS             822..1247
                     /locus_tag="VK150_01170"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HLP29938.1"
                     /translation="MSQELARWLGESDHADLQPAHCAAIQALWVHPGGARLTDLARTA
                     RMTKQSMGALVDHLERTGYVQRMADPGDRRAARVDLTGRGIAFTEAVRAFVREVEADW
                     ARRVGDRRMRDLQETLARLVVESAPRRPASRDRQPTHPR"
     gene            complement(1226..2140)
                     /locus_tag="VK150_01175"
     CDS             complement(1226..2140)
                     /locus_tag="VK150_01175"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HLP29939.1"
                     /translation="MPFLDLPPWMLALLLAPFGLVVGSFGNVLIHRLPQEDPAERNVI
                     TKASHCPGCKANIKPWHNVPLFGWLWLRGKCAACGWPIPVRYPLVELLTGLLFAASPW
                     LWPFGTLIWFKGLVCGYALIVLFFTDFTEMMLPDAIQFPLMALGVALTLPQLLRPEAI
                     SRIWSDTGSVIQALTFHNGLQPAPMYRGFEAAVTWQQSLVGLAVGYGVPALMNQLYKW
                     IRKTDGLGMGDFKMLAWLGAFWGWAPMLGILFLGAGLGAAVGVPLMLLRRSSGQTMLP
                     FGCFLALATPIVVFFGRALWLGYLGWVG"
     gene            2262..>2591
                     /locus_tag="VK150_01180"
     CDS             2262..>2591
                     /locus_tag="VK150_01180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29940.1"
                     /translation="MRPFILMAVLCGVLAGQTATIALRRPDKEPETLAQLARKLKRDR
                     TASWVLLEGARSEWVPGFRKALATDDELSTVGLPILSLGSKSPLASELRIQQGWGTEA
                     RWVLVASD"
BASE COUNT          446 a          867 c          931 g          347 t
ORIGIN      
        1 cacctacacc atcgtcggcg aggacgaggc cgaccccgcg ttggggaagc tcagctgggc
       61 ctcacccctg gcggaagcgc tcctgcacgc cgaacccggc gacgaggtgg tctggcgccg
      121 gcccgccggc acgaagcggc tggagatcct cgcgatccga cccggccaag gcgaaggggc
      181 tggcgcttaa cgcgcctccc gccgggccaa cagctcccgc tgggcggcgc cgttcgcgag
      241 gcgctggtag gccgggacca tgtcctcggt gacaagttca agcatgacgc ggttctccac
      301 ccagaattcg tacagctcga agaggcgcac ctggggattg gggccgcgcc agaaatggcg
      361 ggtccgccag ccttcgcggg cgccgatgga ctcgatgacg gcccggtcca ccgggaccga
      421 aatcagcgca tggaaggcga cggccggcgg tgcctcccgc agcgcggcct cccccatccc
      481 gtcgccgacc cccggcacca ggacggtggc ttcggggtag acctcgatgc cggtaccgga
      541 gacgtcctct gcatagacca cccacgcgcc cgggatcggg ccgatgaagg ggcctgcata
      601 gccctggagc agttcggcga gcacctgggc gacatggcga ggatcgcggg cggggatgga
      661 gatgtggtgg atcaagaggg ctccaatggt cagttgagct gacgaatata gtcaggtaag
      721 ctgatcgtat gtcaagccct gattccgacc gttcctctcg cgaacaggag cgcctcggcc
      781 ctccccttct cggcgcgctc ctccgcctcg cccaccaggc catgagtcag gaactggcgc
      841 gatggctagg tgaatccgac cacgcagacc tgcagcctgc gcactgtgcg gcgatccagg
      901 cgctctgggt ccatccaggc ggggcccggt tgaccgacct ggcccggacc gcgcgcatga
      961 cgaagcagtc catgggggcc ctggtggatc acctggagcg gacgggctac gttcagcgca
     1021 tggcggatcc cggggatcgc cgcgcggcgc gagtggacct cactgggcgg gggatcgcgt
     1081 tcaccgaggc cgtccgcgcc ttcgtccgag aggtcgaggc ggattgggcc cgccgggtgg
     1141 gggaccgtcg gatgcgggac cttcaggaga ccttggccag gctcgtggtg gaatcggccc
     1201 cgcgccgacc ggcttcccgg gatcgtcagc ccacccaccc caggtagccc agccacagcg
     1261 cccggccgaa aaacacgacg atgggcgtgg ccagggcgag gaagcagccg aagggcagca
     1321 tggtctggcc gctcgagcgg cgcaggagca tcagcggcac gcccacggcg gcgcccaggc
     1381 cggcgcccag gaagaggatc cccagcatcg gcgcccagcc ccagaaggcg cccagccagg
     1441 cgagcatctt gaagtcgccc atgcccaggc cgtccgtctt gcggatccac ttgtagagct
     1501 ggttcatgag ggcgggcacg ccgtagccca ccgcgaggcc gacgaggctc tgctgccagg
     1561 tgacggcggc ctcgaaaccg cggtacatcg gcgcgggctg gaggccgttg tggaaggtca
     1621 aggcctggat gacgctgccg gtgtccgacc agatgcgcga gatggcctcg ggccgcagca
     1681 gctggggcag ggtgagggcc acgcccaggg ccatgagggg gaactggatc gcgtcgggca
     1741 gcatcatctc ggtgaaatcg gtgaagaaca gcacgatcag cgcgtagccg cagacgaggc
     1801 ccttgaacca gatcagcgtg ccgaagggcc agagccacgg cgaggccgcg aagagcaggc
     1861 ccgtcagcag ctccaccagc ggatagcgca cagggatggg ccacccgcag gcggcgcact
     1921 tcccccgcag ccacagccaa ccaaacaggg gcacgttgtg ccagggcttg atattcgcct
     1981 tgcaccccgg gcagtggctg gccttggtga tgacgttgcg ctcggcggga tcctcctggg
     2041 gcaggcggtg gatcagcaca ttgccgaaag atcccaccac gagcccgaag ggggccagca
     2101 ggagggcgag catccagggg ggcagatcga ggaagggcat gcaccacgat accccagggc
     2161 aggccgcggt tccggcggtg gggacttccc ggcttttcgc ggcagaatga agtgtccaac
     2221 cgtgctgctc gccccgtgtc gcccgtccag gtggagtgcc catgcgtcca ttcatcctga
     2281 tggcagtgct gtgcggtgtc ctcgccggcc agaccgcgac catcgccctg cggaggccgg
     2341 acaaggaacc cgaaaccctc gcgcagctcg cccgcaagct gaaacgggac cgcaccgcca
     2401 gctgggtgct gctggagggc gcccgctccg agtgggtgcc gggattccgg aaggccctgg
     2461 ccaccgacga cgagctgagc acagtcgggc tgcccatcct cagcctggga tcgaagtcgc
     2521 cgctcgcttc ggagttgcgg atccagcagg gctggggcac ggaggcgcgc tgggtgctgg
     2581 tggcgtccga c
//
LOCUS       DATGWW010000084         1542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_96435, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000084 DATGWW010000000
VERSION     DATGWW010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96435"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..582)
                     /locus_tag="VK150_01185"
     CDS             complement(<1..582)
                     /locus_tag="VK150_01185"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLP29941.1"
                     /translation="MIGWCLAALSLAAQPISVALEKPVLSLNPLLLAREVESQVVDLV
                     FDRLVALDERGAFVPQLLEGWEISKDGRDILLKLRPGQTWQDGSPIEAEDLVATWRML
                     SLPQVRKVYDLVGVRTLDSLVAEGPLRVRVRLKQARASLLSDLYNFQPVPRKRYDLSG
                     EPLKHRLNFAPIGSGPYRVLPGAHSREIQLELWK"
     gene            complement(597..>1542)
                     /locus_tag="VK150_01190"
     CDS             complement(597..>1542)
                     /locus_tag="VK150_01190"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLP29942.1"
                     /translation="GLADAFELWDATDSKALLDEFKAERLHFSTAPPLRYYLVRKGAQ
                     GAGLVQALSVPLASFGAYFLNCDERRSLLGDLRLRQALAELVPWQHLARARRFFPSRL
                     ATGFWPPESWPFDTRSRPLPQPERAEALLEAAGWKRGPDGIRQDGKGRRLALVGYQPA
                     PANHQSVLNLLAAQAAKVGIQVEVRTLPFHVVSEKAARHEGDLWAFGWTLALDPDVDS
                     PLFTKEGYLTHANVSSYLNPEVDRLFEEGRHTLDPEPRRKIYLQIAEIIHRDRPIIPI
                     NYQQTRVLVHRRLHGVGFNRLGQSFAFWPGRRGWKLEN"
BASE COUNT          257 a          521 c          541 g          223 t
ORIGIN      
        1 cttccacagc tccagctgga tctcccgcga atgggccccg ggcagcaccc ggtaaggccc
       61 ggaaccgatg ggcgcgaaat tgagccggtg cttcaagggc tcgcccgaca ggtcgtacct
      121 tttccgggga accggctgga agttatacag gtcggagagc agggaggccc gcgcctgctt
      181 caggcggacc cgcacccgga ggggcccctc ggccaccagg ctgtccagag tgcggacgcc
      241 caccaggtca tagaccttcc gcacctgggg cagcgacagc atccgccagg tggccaccag
      301 gtcctcggcc tcgatgggcg agccgtcctg ccaggtctgc ccgggccgca gcttcaggag
      361 gatatcccgg ccatccttcg agatctccca gccctccagg agctggggca cgaaggcgcc
      421 gcgctcgtcc agggccacga ggcggtcgaa caccaggtcc accacctgcg actcgacctc
      481 ccgggccagc aggaggggat tcaggctcag caccggcttt tccagcgcca ccgaaatggg
      541 ctgcgccgcc agggacaacg ccgccagaca ccaaccgatc atccaccgca tcagaatcag
      601 ttctccaact tccagccgcg ccgcccaggc cagaaggcga agctctggcc caaccggttg
      661 aagcctaccc cgtggaggcg ccgatgcacc agcacccggg tctgctggta gttgatgggg
      721 atgatcgggc ggtcccggtg gatgatctcc gcgatctgca ggtagatctt cctgcggggt
      781 tctggatcta gggtgtggcg tccttcctcg aagaggcggt ccacttccgg attgaggtag
      841 gagctcacgt ttgcgtgggt aaggtagccc tccttcgtga acagggggct gtccacgtcc
      901 gggtcgaggg ccagggtcca gccgaaggcc cagagatccc cttcgtggcg ggcggccttc
      961 tcggagacca cgtggaacgg cagggtgcgg acctcgacct ggatccccac cttggcggcc
     1021 tgggcggcca ggaggttcag gacgctctga tggttggcgg gcgccggctg gtagcccacc
     1081 agggcgaggc gccggccctt tccatcctgc cggatgccgt cagggccgcg tttccagccg
     1141 gcggcctcca gaagggcctc ggcccgctcc ggctgaggca ggggacgcga ccgggtgtcg
     1201 aagggccagc tttcgggggg ccagaagccg gtggcgaggc ggctcggaaa gaacctgcgg
     1261 gcccgggcca ggtgctgcca gggcaccagt tccgcgagcg cctgacggag gcgcaggtcg
     1321 ccgagcaggc tgcgccgctc gtcgcagttc aggaaatacg caccgaagga ggccaggggg
     1381 accgacaggg cctgcaccag ccccgcaccc tgggccccct tgcggacgag gtagtagcgg
     1441 aggggcggcg cggtggagaa gtgcagccgc tccgccttga actcgtcgag cagagccttc
     1501 gagtcggtgg cgtcccagag ctcgaacgca tccgccagcc cg
//
LOCUS       DATGWW010000085         1699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_319766, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000085 DATGWW010000000
VERSION     DATGWW010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319766"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..384)
                     /locus_tag="VK150_01195"
     CDS             complement(<1..384)
                     /locus_tag="VK150_01195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29943.1"
                     /translation="MKKYRNAASGILVPLAALAFWQMLSAKGWVNATILPSPMQVLVK
                     WWAYLRPLEAFDPAQGSYLAWCFSGELIHDALGSLYRVLLGFAIGGGLALPLGLAMGY
                     SRLVYGLFNPLIQVLRPIPPIAYIPL"
     gene            complement(387..1349)
                     /locus_tag="VK150_01200"
     CDS             complement(387..1349)
                     /locus_tag="VK150_01200"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLP29944.1"
                     /translation="MRVKPYLSLLFLSALALAAQDVVRLGNLKFAHYGAVSYMKEIAP
                     KYRLKIEERMFAKGIDINPAIVAGEIDASAAALDAAIAGRAAGVPIVVVAGFAKGGAR
                     IVVGETTGIKSLRDLKGKKVGVARGGAQELLLLAELAQAGLTWADKPGKDVLVMYLPF
                     ADLNQALMAKHIDAMCQSEPYSSQAINRKFGVELLKPYDTPLGEPVRALVITEKLYKE
                     RRDVAQRFLMCFVEATKKFIDEPKTAEKFVREVMFKNQITSDDYQDAIGNSPFSYDIT
                     LAHVQVTTDLMAKYGVGRMANPPKAGDWVKLDLLAEAKKQLKVK"
     gene            complement(1439..>1699)
                     /locus_tag="VK150_01205"
     CDS             complement(1439..>1699)
                     /locus_tag="VK150_01205"
                     /inference="COORDINATES: protein motif:HMM:NF017534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29945.1"
                     /translation="TCFVAMDPARRPAYVDACAQHLRPGGLWMAALFHDVNGRPGPPH
                     AIPMADMRALAETRFDVLHLGAATGSHPRRAGREFLMVARKR"
BASE COUNT          271 a          534 c          613 g          281 t
ORIGIN      
        1 cagcgggatg taggcgatgg gcgggatggg ccgcaacacc tggatgagcg ggttgaagag
       61 gccgtagacc aggcggctgt agcccatggc caggcccagc ggcagggcca ggccgccgcc
      121 gatggcgaag cccagcagca cgcggtagag gctccctagg gcgtcgtgga tgagctcgcc
      181 cgaaaagcac caggcgaggt acgagccctg ggcggggtcg aaggcctcca ggggccgcag
      241 gtaggcccac cacttcacga gcacctgcat gggggagggg aggatcgtgg cgttcaccca
      301 gcccttggcg gacagcatct gccagaaggc cagggccgcc aacgggacga gaatgccgga
      361 ggcggcgttc ctgtactttt tcatgcctac ttcaccttca gctgcttctt ggcctcggcg
      421 agcaggtcga gcttcaccca gtccccggcc ttcggggggt tggccatgcg gcccacgccg
      481 tacttggcca tgaggtccgt ggtgacctgc acgtgggcca gggtgatgtc gtaactgaac
      541 ggcgaattgc cgatggcgtc ctggtagtcg tcggaggtga tctggttctt gaacatcacc
      601 tcgcggacga atttctccgc ggtcttgggc tcgtcgatga acttcttggt ggcttccacg
      661 aaacacatca ggaagcgctg ggccacgtcg cgacgctcct tgtagagctt ctcggtgatg
      721 accagggcgc ggacgggctc gcccagcggt gtgtcgtagg gcttcagcag ctccacgccg
      781 aacttccggt tgatggcctg agagctgtag ggctcgctct ggcacatggc gtcaatgtgc
      841 ttggccatga gggcctggtt caggtcggcg aagggcaggt acatgaccag cacatccttg
      901 ccgggtttgt cggcccaagt gaggccggct tgggccagct ctgcgagcag aagcagttcc
      961 tgggcgccac cgcgggccac gcccaccttc ttgcccttga ggtccctcag cgacttgatg
     1021 ccagtggtct cgcccaccac gatgcgtgcg ccgcccttgg cgaagccggc caccaccacg
     1081 atgggcacac ccgcggcgcg cccggcgatg gccgcgtcca gggccgcggc gctggcgtcg
     1141 atctcgcccg ccacgatggc cgggttgatg tcgatgccct tggcgaacat ccgctcctcg
     1201 atcttcaggc ggtacttggg cgcgatctcc ttcatgtagg acacggcccc gtagtgcgcg
     1261 aacttcaggt tgccgaggcg gaccacatcc tgggcggcga gggccagggc cgagaggaag
     1321 agcagcgaga ggtacggctt cacgcgcatg ggtcgctccg gattgggggt gatgaggtca
     1381 ttctagggca agaccccggg cacggcgccc ggcaatcagc gccctgtgac gcggaagctc
     1441 accgcttgcg cgccaccatg aggaattccc ggcccgcccg ccgcgggtgg cttccggtgg
     1501 ccgcgcccag gtgcagcacg tcgaagcggg tctcggcgag ggcgcgcatg tcggccatgg
     1561 gaatggcgtg gggcggtccg ggccggccgt tcacgtcgtg gaagagcgcg gccatccaca
     1621 ggcctccggg ccgaaggtgc tgggcgcagg cgtccacgta ggcggggcgg cgggccggat
     1681 ccatggccac gaagcaggt
//
LOCUS       DATGWW010000086         2461 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_139176, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000086 DATGWW010000000
VERSION     DATGWW010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139176"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="VK150_01210"
     CDS             complement(<1..202)
                     /locus_tag="VK150_01210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29946.1"
                     /translation="MRHWFWILFTALCLHAQEARIQILGTTDVHGHILAEDTFSLRPA
                     NHGWAKVATLIRRQKALNPNTLL"
     gene            302..766
                     /locus_tag="VK150_01215"
     CDS             302..766
                     /locus_tag="VK150_01215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29947.1"
                     /translation="MQEVQIKAPKHEFTLLCDDIRQEMGGKTSLMGLYDHHIVVPQVP
                     FTLPKVCFYTRFSRMDGQFKFGFSIVSPTGDRKDVIRDSDVQIPDGAKEGTFNVIASP
                     FEVSGEGVYEVIIALTKGADRFEYVYKFAISDASRLQAEYEKAMAESGQAGN"
     gene            941..1945
                     /locus_tag="VK150_01220"
     CDS             941..1945
                     /locus_tag="VK150_01220"
                     /inference="COORDINATES: protein motif:HMM:NF013094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HLP29948.1"
                     /translation="MIVDRYSKQRIFLGREADEGLRSKKVAILGLGALGSVIAPWLAR
                     AGVGHLTLIDRDLVEASNLQRQLLYGEADLGRPKAEVAAERLAEANSHIELNPVVADL
                     TSGNARQLLSGFDLICDGTDNFEARFLINDVAILSGTPWIYAGAIGGEGVVWPLHPPH
                     TPCLRCLIEEPPAGGDVDTCDSAGVLGPAVGIIASWAALEALKVLTGREPHADLVRFD
                     FWNDERQFLKAPKSRCRYCTEKITEFLDARWSLKASALCGLEGVQIRVNPPGRLDLPA
                     LKERLESRTHSPWKQAGLMLKGRDGADEITLFADGRALVHGPMTPERARSWYTEVVGC
                     "
     gene            2064..>2461
                     /locus_tag="VK150_01225"
     CDS             2064..>2461
                     /locus_tag="VK150_01225"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009146 - purine nucleoside triphosphate
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HLP29949.1"
                     /translation="MLNVLLASRNAGKLREFSVLLPDLRLVLWPAEAPELPETGAFFQ
                     DNALQKAEGALAWWREHGTEPVDAVLADDSGLCVDALWGGPGVLSARFAPDLPDYRDK
                     NRRLLAMLPEGADRGARFVCVLAFAPMKGHP"
BASE COUNT          422 a          872 c          755 g          412 t
ORIGIN      
        1 ccaggagggt gttcggattc agggccttct gccgacggat gagcgtggcg accttcgccc
       61 agccgtggtt tgcgggacgc aggctgaagg tgtcctcggc caagatgtga ccgtgcacat
      121 ccgtggtgcc aagaatctga atccgggcct cttgcgcatg caggcacagc gcggtgaaca
      181 ggatccagaa ccaatgccgc atgcagcctc cgggtgtccc caccaaccca gggttggatg
      241 ggaccgactt caagggtaaa ctttcccttc acccaaggat gccccctctt tcggagccct
      301 catgcaagaa gtccagatca aggcccccaa gcacgaattc acgctgcttt gcgacgacat
      361 ccgccaggag atgggcggca agacttcgct catgggcctc tacgaccacc acatcgtggt
      421 gccccaggtc cccttcaccc tgcccaaggt gtgcttctac acccgcttct cccgcatgga
      481 cggccagttc aagttcggtt tctccatcgt gagccccacc ggcgaccgca aggacgtgat
      541 ccgcgacagc gacgtgcaga tccccgacgg cgccaaggaa ggcaccttca acgtcatcgc
      601 cagccccttc gaggtgagcg gcgagggcgt ctatgaagtg atcatcgccc tcaccaaggg
      661 cgccgaccgc ttcgagtacg tctacaagtt cgccatctcc gacgccagcc gcctccaggc
      721 cgagtacgag aaggccatgg ccgagtccgg ccaggccggc aactaagcgt ctcaccggtt
      781 ctctcgcaac ggcgcccaca cgggcgccgt tgcttttaga ctggacgaag gagacggccg
      841 tgtccgaccg ctacgccaag caacgaatct tctcggtatc gcctccggcg atacgcgaga
      901 cctcccgctt tcaaccctgc ggtcatccta ggtgaggggc atgatcgtgg atcgctattc
      961 aaagcaacgc atcttcctcg gccgcgaggc cgacgagggt ctgcgttcga agaaggtggc
     1021 catcctcggc ctcggggccc ttggctcggt catcgccccc tggctggccc gggcgggcgt
     1081 ggggcacctc accctcatcg accgcgacct ggtggaagcc tcgaacctcc agcgccagct
     1141 gctctacggc gaagccgact tggggcgccc caaggccgag gtggccgccg agcgcctggc
     1201 cgaagccaac agccacatcg agctgaatcc cgtcgtggcc gacctcacca gcggcaacgc
     1261 tcgccagctg ctctcgggct ttgatctcat ctgcgacggc accgacaatt tcgaagcccg
     1321 cttcctcatc aacgacgtcg ccatcctctc gggcaccccc tggatctatg ccggagccat
     1381 cggtggcgag ggcgtggtct ggccgctgca cccgccccac accccttgcc tgcgctgcct
     1441 catcgaggaa ccccccgccg gcggcgatgt ggacacctgc gacagcgccg gcgtcctggg
     1501 ccccgcggtg ggcatcatcg ccagctgggc ggccctggag gccctcaagg tgcttacggg
     1561 ccgggaaccc catgcggacc tggtgcgctt cgatttctgg aatgacgagc gccagtttct
     1621 gaaggcgccg aagtcgcgtt gccgctactg caccgaaaaa atcaccgagt tcctggacgc
     1681 ccgttggagc ctgaaggcca gcgccctctg cgggctggaa ggcgtgcaga tccgggtgaa
     1741 tccacccgga aggctcgacc tgccagccct gaaggaacgc ctggaaagcc ggacccacag
     1801 cccctggaag caggccggcc tgatgctgaa aggccgcgac ggtgccgacg agatcaccct
     1861 cttcgccgac ggccgcgccc tggtgcacgg ccccatgacc cccgaacggg cccggagctg
     1921 gtacacggaa gtcgtcgggt gctgagacag aaagttgaac cgcagaaggc gcagatgggt
     1981 gtcacccggc ttttccgctt ctcctctgcg tccatctgcg tcatctgcgg tttcatattc
     2041 agtttcacga aggtgatcgc cccatgctga acgtcctcct cgcctcccgc aacgccggca
     2101 agctccgtga attctccgtc ctgcttcccg acctgcggct cgtgctgtgg cccgcggaag
     2161 cgccggagct gcccgagacc ggtgccttct tccaggacaa cgccctgcag aaggccgagg
     2221 gggccctggc ctggtggcgg gagcacggca ccgaacccgt ggacgccgtg ctggccgatg
     2281 attcgggcct ctgcgtggac gcgctctggg gcgggcccgg cgtgctgagc gcgcgcttcg
     2341 cgccggacct tcccgactac cgcgacaaga accgccgtct cctcgccatg ctgccggaag
     2401 gcgcggaccg cggcgcccgg ttcgtctgcg tgctggcctt cgcgcccatg aagggccacc
     2461 c
//
LOCUS       DATGWW010000087         1877 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_52463, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000087 DATGWW010000000
VERSION     DATGWW010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1877
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52463"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..646)
                     /locus_tag="VK150_01230"
     CDS             complement(<1..646)
                     /locus_tag="VK150_01230"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HLP29950.1"
                     /translation="MSATCEYQAKDYKSDLKPIWCPGCGDYSVVQGIYRALAAIGRPP
                     HEIAFVSGIGCSSRIPGYTTAYGFNSVHGRSLPIAQGIKMANPDLLVLAAGGDGDGFS
                     IGGGHIAHLIRRNMDITYIVMDNQIYGLTKGQLSPTSQKGRVTCTSRYGSMENPVNPL
                     LYTLAYGAGFVAQASPTDLAGMSAIIEEAIRYPGFAFVNIQSPCVTYGEEAQQIK"
     gene            complement(655..>1877)
                     /locus_tag="VK150_01235"
     CDS             complement(655..>1877)
                     /locus_tag="VK150_01235"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29951.1"
                     /translation="KTSMNVVASETKGQVKLITDGNDMCAAAAIFAGCEFFGGYPITP
                     STEIMQFFTDHVWKYGGAVLQAEDEIAGIGAAVGASFAGKKAMTATSGPGLSLKSEMM
                     GLASIAELPLVIVDVQRGGPSTGLPTKTEQADLFAAAFSAHGDVIRPVLAPTSVADTF
                     RTTIEAFNIAEYYQTPVIILSDQEIASRKETLDPIDTAQFKLVERLRPSGADLQDYKR
                     FKQTDNHISPISHPGMLGGTYLASGIEHVESGAPTNSGSVHQRMNDKRTKKFDPLKDR
                     KDLFEVLGNPDAPIAMVAWGSVAGVCREALAMAQAEGLNVKLLVPYLLYPVAEGVYTD
                     FFASVQKGLVIEQSHLAQTFKLLRMHLDLPKGLTSLARSGANPFLPGEIVAALHRLLS
                     ELQRSHEGKLQPQE"
BASE COUNT          285 a          560 c          702 g          330 t
ORIGIN      
        1 ccttgatctg ctgggcctcc tcgccgtagg tgacgcaggg ggactggatg ttcacgaagg
       61 cgaagccggg gtagcggatg gcctcctcga tgatggccga catccccgcg aggtccgtgg
      121 gggaggcctg ggccacgaag cccgcgccgt aggccagcgt gtagagcagc gggttgaccg
      181 ggttctccat gctgccgtac cgcgaggtgc acgtgacgcg gcccttctgc gaggtgggcg
      241 agagctggcc cttggtgagg ccgtagatct ggttgtccat cacgatgtag gtgatgtcca
      301 tgttgcggcg gatcaggtgg gcgatgtgcc cgccgccgat ggagaagccg tcgccgtcgc
      361 cgccggcggc cagcaccagc aggtcggggt tggccatctt gatgccctgg gcaatgggca
      421 gggaccggcc gtggacgctg ttgaagccgt aggccgtggt gtagccggga atgcggctgg
      481 agcagccgat acccgagacg aaggcgatct catggggcgg gcgtccgatg gcggccagag
      541 cgcggtagat gccctgcacc accgagtagt cgccgcaccc ggggcaccag atgggcttga
      601 gatcgctctt gtagtccttg gcctggtatt cgcaggtagc gctcatggtc gacctcactc
      661 ctggggctga agcttgccct cgtggctgcg ctgcagctcc gagaggagac ggtggagggc
      721 cgcgacgatc tcgccgggca ggaaggggtt cgcgccgctg cgggccaggg aggtcaggcc
      781 cttgggcagg tcgaggtgca tgcggagcag cttgaaggtc tgggccaagt gggactgctc
      841 gatgacgagg cccttctgca ccgacgcgaa gaagtcggtg tagacgccct cggccaccgg
      901 gtacagcagg tagggcacca gcagcttcac gttcagcccc tcggcctggg ccatggccag
      961 cgcctcgcgg cacacgcccg cgacgctgcc ccaggccacc atggcgatgg gcgcatctgg
     1021 gttgcccagc acctcgaaca ggtccttgcg gtccttgagc gggtcgaact tcttcgtccg
     1081 cttgtcgttc atgcgctggt ggacggaacc gctgttggtg ggtgcgccgg attcgacgtg
     1141 ctcgatgccg gaggccaggt aggtgccgcc cagcatgccg gggtggctga tggggctgat
     1201 gtggttgtcg gtctgcttga accgcttgta gtcctgcaga tccgcgccgg aggggcggag
     1261 gcgctcgacg agcttgaact gcgcggtgtc gatgggatcc agcgtctcct tgcgggaggc
     1321 gatctcctgg tcggagagga tgatcaccgg cgtctggtag tactcggcaa tgttgaaggc
     1381 ctcgatggtg gtgcggaagg tatcggccac cgacgtgggc gccagcaccg ggcggatcac
     1441 gtcgccgtgg gcggagaagg ccgccgcgaa gagatcagcc tgctcggtct tggtgggcag
     1501 gcccgtggag gggccgccgc gctgcacgtc cacgatcacg aggggcagct cggcgatgct
     1561 ggcgaggccc atcatctcgg acttcaggga gaggccggga ccgctggtgg cagtcatggc
     1621 cttcttgccc gcgaaggagg cgcccacggc ggcgccgatg cccgcgatct catcctcggc
     1681 ctgcagcacc gccccgccgt acttccagac gtggtcggtg aagaactgca tgatctcggt
     1741 ggaaggcgtg atggggtacc cgccgaagaa ttcgcagccc gcaaagatcg ccgcggcggc
     1801 gcacatgtcg ttgccgtcgg tgatgagctt cacctggccc ttggtctcgg aggccaccac
     1861 gttcatgctg gtcttga
//
LOCUS       DATGWW010000088         1881 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_7424, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000088 DATGWW010000000
VERSION     DATGWW010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7424"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..594
                     /locus_tag="VK150_01240"
     CDS             <1..594
                     /locus_tag="VK150_01240"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HLP29952.1"
                     /translation="LLPSRRLNQVHRCGVVEASEAVVDGDGLWTCTPGVRIGVRVADC
                     VPILLAGPLPGGDPWVAALHAGWRGATGHGDPTPGGGILRRGVARYRSLGGTPGNLVW
                     ALGPAIQACHFEVGEEVVEAARLDPAWRETLRSTGPSGRSHLDLHGFLRAQAFDLGMD
                     AGREGSVALCTVCRPDLLYSYRRGETTGRQWGWIEIG"
     gene            646..1005
                     /locus_tag="VK150_01245"
     CDS             646..1005
                     /locus_tag="VK150_01245"
                     /inference="COORDINATES: protein motif:HMM:NF015959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoVG family protein"
                     /protein_id="HLP29953.1"
                     /translation="MLNITDVRITKVDGDDKLKAFAALVIEDCFLVGDLRVVEAEDGY
                     FVAMPSRRKRDGSFKDIAYPLNNTLREQIEERVLLAYEAATGHRALSRIERGEAAQVR
                     PDLLSVEEFGFTPKSNP"
     gene            1063..1137
                     /locus_tag="VK150_01250"
     tRNA            1063..1137
                     /locus_tag="VK150_01250"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1095..1097,aa:Gln,seq:ttg)
     gene            complement(1337..>1881)
                     /locus_tag="VK150_01255"
     CDS             complement(1337..>1881)
                     /locus_tag="VK150_01255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29954.1"
                     /translation="HRLTLTRERLGYAADFGLGEVPGGRVFELKEATTAETRQEPALD
                     PNAPGSLKLAGGFSVRVKVDGKDHGELSPGSKLPVPPGSHKLELSSARHFYKDGRTVS
                     VAAGQTVPLTVPGLATLGVETFPGTGKVFVDGQDTGIESDGSTIQVALGRHTVTVRGA
                     KGSKTETVDLTGNKNLRFPL"
BASE COUNT          254 a          640 c          684 g          303 t
ORIGIN      
        1 ctgctgccct cccggcggtt gaaccaggtg caccgctgcg gggtggtgga ggcctccgag
       61 gccgtggtcg acggcgacgg cctctggact tgcacacccg gcgtccgcat cggcgtgcgg
      121 gtggcggact gcgtccccat cctgctggcg ggccctctgc ccggagggga cccctgggtt
      181 gccgccctgc atgcgggctg gcgcggggcg acgggccacg gcgatcccac gccgggcggg
      241 ggcatcctgc gccgcggcgt ggcgcggtac cggtcgctgg ggggcacccc cgggaacctg
      301 gtctgggcct tgggcccggc catccaggcc tgccatttcg aggtgggcga ggaggtcgtc
      361 gaggcggcgc ggctggatcc cgcctggcgg gagacgctgc gcagcaccgg cccgtccggc
      421 cggtcccacc tggacctcca tggatttctc cgggcccagg ccttcgacct gggcatggac
      481 gccgggcgag agggcagcgt cgcgctctgc acggtgtgcc gcccggacct gctctactcc
      541 taccgccgcg gggaaaccac gggtcgccag tggggctgga tcgagatcgg ctaacctgga
      601 caggccccac gacggacggc cggggctgga agcccgagga tcgccatgct caacatcacg
      661 gacgttcgca tcaccaaggt ggatggagac gacaagctca aggccttcgc ggccctggtc
      721 atcgaggact gcttcctggt cggcgacctc cgggtggtgg aggcggagga cggctacttc
      781 gtggccatgc ccagccggcg caagcgcgac ggaagcttca aggacatcgc ctacccgctg
      841 aacaacacgc tgcgcgagca gatcgaggag cgggtgctcc tggcctacga ggcggccacg
      901 ggccatcgcg ccctcagccg catcgagcgg ggtgaggcgg cccaggtgcg ccctgacctg
      961 ctgagcgttg aggaattcgg gttcacgccg aagagcaatc cctaggtcgg gaaccggagg
     1021 cttgggcagg acgcgaaccc gcgctatgct tgcctttgcg cctggggagt agccaagtgg
     1081 taaggcagca ggttttgatc ctgcgtaccg agggttcgaa tccttcctcc ccaaccaaat
     1141 gctgtcaggg ggttccgcgc tgcgcgcaca ccccctggcc cccgcgctcg gcccggcgga
     1201 gccgtgcctc tctggatgct gtcaggggac tccgcgctgc gcgcacaccc cctggccccc
     1261 gcgcaaagtc ccggcggagc cgggattttg cttgctgcgc ccacccttgc ggagaccccc
     1321 tatgggtggg gtgtggctac aacgggaagc gcaggttctt gttgccggtg aggtcgacgg
     1381 tttcggtctt gctgcctttg gcgcccctga cggtgacggt gtggcggccc agggcgacct
     1441 ggatggtgct gccgtcgctt tcgatgcccg tgtcctggcc atccacgaac accttgccgg
     1501 ttcccgggaa ggtctcgacg cccagggtgg cgagaccggg cacggtcagc ggcacggtct
     1561 gaccggcggc cacggaaacg gtccggccat ccttgtagaa gtggcgcgcg ctgctgagtt
     1621 ccagcttgtg cgagccgggc gggaccggga gcttcgaccc gggactcagc tcgccgtggt
     1681 ccttcccgtc caccttgacg cggacgctga agcccccggc cagcttgagg ctccccggcg
     1741 cgttgggatc cagggccggc tcctggcggg tctccgccgt tgtggcttcc ttgagttcga
     1801 acacccggcc gcccggaact tcgcccaggc cgaaatccgc ggcatagccg agcctttccc
     1861 gggtgagggt caggcggtgg g
//
LOCUS       DATGWW010000089         4668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_365570, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000089 DATGWW010000000
VERSION     DATGWW010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4668
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_365570"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..403)
                     /locus_tag="VK150_01260"
     CDS             complement(<1..403)
                     /locus_tag="VK150_01260"
                     /inference="COORDINATES: protein motif:HMM:NF025057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HLP29955.1"
                     /translation="MAEQQPEVRIRILKKKGGHAAAHGGAWKVAYADLVTAMMAFFLL
                     MWLLNSADKNTKAGIAGMFQDANFFNSERGKEILANHGKGILPGGRGMAPGPDGDGGT
                     DSTVESPGAAEEELKAMEATAEAIEKAFQQDE"
     gene            complement(495..1361)
                     /gene="motA"
                     /locus_tag="VK150_01265"
     CDS             complement(495..1361)
                     /gene="motA"
                     /locus_tag="VK150_01265"
                     /inference="COORDINATES: protein motif:HMM:TIGR03818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HLP29956.1"
                     /translation="MFFIIGLVVVFGAVIGGYLMEGGSLATLVHPLPAEGLIIFGAGA
                     GAFLAANPLPLIKRVAADLAKAVKGSPYSKAVYMEVLMMQYEVYVNIKKGGLLALEQD
                     VNDPHNSAIFKKYPTFTHNHHALDFFCDSMKLLINGSAKMDEIDMVMDADLDVHHAEN
                     AAPGAALSNMADAFPAFGIVACVMGVVITMGFLDQPPNIIGSKVGAALVGTFLGILLA
                     YGVFQPLAKNIDAVNGLEAYYFNCIRSGLTSFGNGAAPITAVEFARRNIPSTERPGSG
                     ELEEVVRQIKPR"
     gene            1465..2457
                     /locus_tag="VK150_01270"
     CDS             1465..2457
                     /locus_tag="VK150_01270"
                     /inference="COORDINATES: protein motif:HMM:NF014027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HLP29957.1"
                     /translation="MTPSTPALGPVGSYVKHHFRHFNAAALVDAAEGYRAYLAKGGRM
                     MVTLAGAMSTAELGLSFAEMIRQDKVHLIVCTGANLEEDIFNLVAHDFYERVPHYRDL
                     TPQDEAGLLSRHMNRVTDTCIPEMEAMRRMEKAMLEVWMDADAKGERYFPHEFFQKVL
                     KSGKYKEHYQIDPKHSWMLAALEKGVPIVVPGWEDSTLGNMYAAAVIRGDVKNVHTVR
                     TGIEYMTWLAKHYQDVTKTSTLGMFQIGGGIAGDFPICVVPMLHQDMQMPEVPLWGYF
                     CQISDSTTSYGSYSGAVPNEKITWGKLGVDTPKFIVESDATIVAPLIFAYLLGW"
     gene            complement(2553..3302)
                     /locus_tag="VK150_01275"
     CDS             complement(2553..3302)
                     /locus_tag="VK150_01275"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLP29958.1"
                     /translation="MSLLRRLPPVLRALLAQTLAFAVLVALARLGLRLPGLVWLLLQA
                     VLAVFLSRWLDLGARWVFMQAALPFLVRASWGLPIPAWVYLVLFLGLALVFGGGLLSR
                     VPLYHASEDAWEKLEGLLPEQTNLRFVDLGCGFGGPVAHLARARPDSTFIGVEASPFT
                     WLVAWLRCLPRRNAHIRLGSLWRVDLERFDVAYAFLSPVPMPALWAKARRELKPGSRF
                     ISHSFDVPGETPHRVIPVKGREGARLLVFEL"
     gene            3501..4400
                     /gene="gluQRS"
                     /locus_tag="VK150_01280"
     CDS             3501..4400
                     /gene="gluQRS"
                     /locus_tag="VK150_01280"
                     /inference="COORDINATES: protein motif:HMM:NF004314.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HLP29959.1"
                     /translation="MILGRFAPSPTGILHLGNLRTALASWLSARKAGGGWIIRMEDVD
                     GPRCRRDFGEAQLRDLAALGLESDQPAIWQSERDAAYQEALADLHAAGRLYACSCTRK
                     DLQLLASAPHAEDSLRPYPGRCRARAWEGWDQALRLRLPEGTVAWEDRVLGPQVDDPA
                     RLTGDPLLFRRDGCFAYHLAVVVDDGAQGVTEVVRGADLRPVTATQIRLQEALGQPRP
                     AYAHLGLVVAPDGSRLGKRAGALGLEALAAKGVPVTEVLGWLGESLGCLDRPRACTAA
                     ELIGSFDWARVPTGEVRVPGAWT"
     gene            complement(4397..>4668)
                     /locus_tag="VK150_01285"
     CDS             complement(4397..>4668)
                     /locus_tag="VK150_01285"
                     /inference="COORDINATES: protein motif:HMM:NF036460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF5329 family protein"
                     /protein_id="HLP29960.1"
                     /translation="TLIQAVANLQGAVFLRNGTEHTPQQAADHLRLKWKNAGGRVKTA
                     PDFIRHCASGSSMSGRPYEIRLKDGRTVLARDWFWTELKRLETTR"
BASE COUNT          774 a         1537 c         1588 g          769 t
ORIGIN      
        1 gttcgtcctg ctggaaggcc ttctcgatgg cctccgccgt ggcctccatg gccttcagtt
       61 cttcttcggc ggctccgggg ctctccacgg tgctatctgt gccgccgtcc ccgtcggggc
      121 ccggggccat gccccggccg ccggggagga tgcccttgcc atggttggcg aggatctcct
      181 tgccgcgctc gctgttgaag aaattggcgt cctggaacat gccggcgatg cccgccttgg
      241 tgttcttgtc ggcgctgttg agcagccaca tcaggaggaa gaaggccatc atcgccgtca
      301 ccaggtcagc gtaggccacc ttccaggcgc cgccgtgggc tgcggcatgg ccgcccttct
      361 tcttgaggat ccggatcctg acttccggtt gctgctcagc catcggcgcg gcctaggcgg
      421 cccgtgcgcg caggctgtcg agccaggcgc ccgtcaggct gagccgcacg ctcatggggg
      481 tgagggtcat ggcatcacct cggcttgatc tgccggacca cttcctccag ctcgccggag
      541 cccggacgct cagtggaggg gatgttcctg cgcgcgaatt ccacggcggt gatcggggcg
      601 gcgccgttcc cgaagcttgt gagcccggag cggatgcagt tgaagtagta ggcctcgagg
      661 ccattgacgg catcaatgtt cttggccagg ggctggaaga cgccataggc cagcaggatg
      721 cccaggaagg tgcccacgag ggcggcgccg accttgctcc cgatgatgtt gggcggctgg
      781 tccaggaagc ccatggtgat gaccacgccc atgacgcagg ccacgatgcc gaacgcgggg
      841 aaggcgtcgg ccatgttgct gagggccgcg ccgggggcag cgttctccgc gtggtggacg
      901 tccaggtcgg catccatgac catgtcgatc tcatccatct tggcgctgcc gttgatgagc
      961 agcttcatgg agtcgcagaa gaagtcgagg gcgtggtggt tgtgggtgaa ggtggggtac
     1021 ttcttgaaga tcgcggagtt gtgcgggtcg ttcacatcct gttcgagcgc cagcaggccc
     1081 cccttcttga tgttcacgta gacctcgtac tgcatcatga ggacctccat gtacacggcc
     1141 ttgctgtacg ggctgccttt cacggccttg gccaggtcgg cggccacgcg cttgatgagg
     1201 ggcaggggat tggcggccag gaaggcgcct gcaccggcac cgaagatgat gagcccttcc
     1261 gcgggcagcg gatggaccag ggtggccagg ctcccgccct ccatcaggta gcccccgatg
     1321 accgcgccga ataccaccac caagccgatg atgaagaaca tgctgcagct cctgcccgtt
     1381 tcatcggccc ggtgggcccg gggctgaatt ctggtcggtc atccaggttc aacggctggc
     1441 acaatgaaag gattcggagg atttatgacc ccttccaccc ccgccctggg ccccgtcggc
     1501 agctacgtga agcaccactt ccggcatttc aacgccgccg ccctggtgga tgccgctgag
     1561 ggctaccggg cctacctggc caagggcggc aggatgatgg tgaccctggc gggggccatg
     1621 agcaccgccg agctgggtct gtcgttcgcg gagatgatcc gccaggacaa ggtgcacctc
     1681 atcgtctgca ccggcgccaa cctggaggag gacatcttca acctggtggc ccacgatttc
     1741 tatgagcggg tgccccacta ccgcgatctg accccccagg acgaggccgg cctcctgagc
     1801 cgccacatga accgggtgac cgacacctgc atccccgaga tggaggccat gcgccgcatg
     1861 gagaaggcca tgctcgaggt gtggatggac gccgacgcca agggcgagcg ctacttcccc
     1921 cacgaatttt tccagaaggt gctcaagagc ggtaagtaca aggaacacta tcaaatcgat
     1981 cccaagcact cctggatgct ggcggctctt gagaagggcg tgcccatcgt cgtccctggt
     2041 tgggaggaca gcaccctcgg caacatgtac gccgccgccg tcatccgcgg cgacgtgaag
     2101 aacgtccaca ccgtgcgcac gggcatcgag tacatgacct ggctggccaa gcactaccag
     2161 gacgtcacca agacttcgac actcggcatg ttccagatcg gcggcggcat cgccggcgac
     2221 ttcccgatat gcgtcgtgcc catgctgcac caggacatgc agatgcccga ggtgccgctg
     2281 tggggctact tctgccagat cagcgactcg accaccagct acggctcgta ctccggcgcc
     2341 gtgcccaacg agaagatcac ctggggcaag ctgggcgtgg acaccccgaa gttcatcgtg
     2401 gaaagcgacg ccaccatcgt ggccccgctg atcttcgcgt atctgctggg ctggtaaagg
     2461 aaatcaaagg ctcaccacca agacaccaag aaaactaaag cagtctcttt tgcagttctt
     2521 ggtgccctgg tgtcttggtg gtgaattctt ttctatagct cgaacaccag caacctcgcc
     2581 ccttcgcgcc ccttcacggg aatcacgcga tggggcgtct cgccgggcac gtcgaagctg
     2641 tggctgatga agcggctgcc gggcttcagc tcccggcgcg ccttggccca gagggcgggc
     2701 atgggcacgg gggagaggaa ggcgtaggcc acgtcgaatc tctccagatc gacacgccac
     2761 aggctgccca ggcggatgtg ggcgttgcgc cgcggcaggc agcgcagcca ggccaccagc
     2821 caggtgaagg gggaggcttc cacgccgatg aaggtcgaat ccggccgtgc cctggcgagg
     2881 tgggccaccg gcccgccgaa gccgcagccc aggtccacga agcgcaggtt cgtctgttcg
     2941 ggcagcaggc cctccagctt ctcccaggca tcctcactgg cgtggtagag gggcacgcgg
     3001 ctcagcaggc cgccgccgaa caccagcgcc aatccgagga acagcaccag gtagacccag
     3061 gcggggatgg gcaatcccca ggatgctcgc accaggaagg gcagggcggc ctgcatgaac
     3121 acccagcgcg cgcccaagtc cagccaccgg gacaggaaca ccgccagcac tgcctggagc
     3181 agcagccaca ccagccccgg aagccgcagc cccagccggg ccagcgccac cagcaccgcg
     3241 aaggccagcg tctgggccag gagggcgcgg agtacggggg gcaggcggcg gaggagggac
     3301 atgaaaccca ggggaagaaa tgaagccgca gatgacgcag atggctcaga tcaagggtgc
     3361 cagaggtccg gacttcccgc ggccgcttgt ccacatctcc tggaatctgt gtgaacctgt
     3421 ggatcagatc cgttcatctg cgtccatctg cgccatctgc ggtttcaagt cttttcatcg
     3481 tccccgggac tcacgccccc atgatcctcg gccgcttcgc cccttcgccc acgggcatcc
     3541 tgcacctggg caacctgcgc acggcgctgg cctcgtggct gtcggcgcga aaggcaggtg
     3601 ggggctggat catccgcatg gaggatgtgg acggtccccg ctgccgccgc gatttcggcg
     3661 aggcgcagct gcgggacctc gcggccctgg gcctcgaatc cgatcaaccc gcgatctggc
     3721 agtcggagcg cgacgccgct taccaggaag ccctcgcgga cctgcatgcg gccgggcgcc
     3781 tgtacgcgtg cagctgcacg cgcaaggacc tgcagctgct ggcttcggcg ccccacgcag
     3841 aggacagcct gcgcccctac ccgggccgat gccgagctcg cgcctgggag ggctgggacc
     3901 aggccctgcg cctgcggctg ccggaaggaa ccgtggcctg ggaggaccgg gtgctgggtc
     3961 cccaggtgga cgatccggcg cggctcaccg gggacccgct gctgttccgc cgcgatggct
     4021 gtttcgccta ccacctggcg gtggtggtgg atgacggcgc ccagggcgtg accgaggtgg
     4081 tgcggggcgc ggacctgcgg cctgtgaccg ccacccagat ccggctgcag gaggccctcg
     4141 gtcagccgcg cccggcctac gcccacctgg gcctggtggt ggcgcccgac gggagccgcc
     4201 tcggcaagcg ggccggggcc ctgggcttgg aagcactggc ggccaaaggg gtgccggtta
     4261 cggaggtgct gggctggctg ggtgagagcc tcggctgcct ggaccggccc cgggcctgca
     4321 ccgcggcgga gctcatcggg tccttcgact gggctcgggt acccacgggc gaggtgcggg
     4381 tgccgggggc ctggacctag cgggtggtct ccaggcgctt cagctccgtc cagaaccaat
     4441 cccgggccag caccgtacgg ccgtccttca gccggatctc gtaggggcgt ccgctcatgg
     4501 agctgccgct ggcgcaatgc cggatgaagt ccggggcggt cttcacgcgc ccgccggcat
     4561 tcttccactt cagacgcagg tgatccgccg cctgctgggg ggtgtgctcc gtcccgttgc
     4621 ggaggaagac ggccccctgg aggttcgcca cggcctggat cagggtct
//
LOCUS       DATGWW010000090         2595 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_414212, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000090 DATGWW010000000
VERSION     DATGWW010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2595
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_414212"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1355
                     /locus_tag="VK150_01290"
     CDS             <1..1355
                     /locus_tag="VK150_01290"
                     /inference="COORDINATES: protein motif:HMM:NF039580.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HLP29961.1"
                     /translation="AAAGLAALALLGRASRRGLRRWAWRRALHTRRELGFRLNPVTFT
                     RKQRLKADLLADSELRTRIQTMAAEGDRDEAALLADVSLYLDEIIPSFNLITTYRYGK
                     RIAGWLLRTCYRVRIGRSAEAALNRIPRDASVVYVMNHRSNADYLLVAFLLANRVSIS
                     YAVGEWARVWPLERLFRSFGSFFVRRRFRDPLYHAVLERYVQRAVAQGTTQGIFIEGG
                     LSRDGRLQPPKLGLLDYMLRAGAKELVFIPVGINYDRVVEDSNLVREAVGKPRRSPIA
                     LIRRTSLWLLGLVWRGATGRFHRFGYAVANFGTPIHARSALEGADLRSLDWEARRPLL
                     EAFADSLVRAVGAEVPITPVAAVAWAYLNLGEAAPGRAHLRDRLLEVLASAQDRGLPL
                     YLPRGSYQRTFDVGLRVLLLRRILLLEEGRLVLPPHKRPLLDYYCNGVSHLLERTRTH
                     "
     gene            1383..>2595
                     /locus_tag="VK150_01295"
     CDS             1383..>2595
                     /locus_tag="VK150_01295"
                     /inference="COORDINATES: protein motif:HMM:NF018938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HLP29962.1"
                     /translation="MSKLVRIANGQGFWGDSIDAPVRLVEAGGIDYLTLDYLAEVTLS
                     IMQKQRRKDPQLGYATDFVDLMKRVLPQLKAKGIRVVANAGGVNPEACRAAVLDVARK
                     LGVSGLKIATVTGDDVLARLPEFQSQGLTLTNMDTGEGLFDAPREILSANVYLQTQAM
                     VEALDTGADIVLTGRCTDPGLTLAPLIHEFKWAADDWNRLAAGTVAGHILECGAQSTG
                     GNFSRWWEVPELWNVGYPIAECAEDGTFVITKHAGTGGMVTVDTVSEQLVYEMGDPQN
                     YITPDVVADFTSIRLEPAGPDRVRVSGITGKPRTPFLKVSGAYLKGYKATGQLTLSGP
                     RALDKARLCADIVWKRLHAAGCDYDHTDAEFLGASTVHAGIAPAPVDPAEIVLRLSVK
                     DASRKKVERFGR"
BASE COUNT          394 a          937 c          864 g          400 t
ORIGIN      
        1 tcgcggcagc ggggctggca gcgctggcgc tgctgggccg ggcctcgcgc cggggattgc
       61 gccgctgggc ctggcgccgt gcgctgcaca cacggaggga gctgggtttc cgcctcaacc
      121 cggtgacctt cacccggaag cagcgcctga aggccgacct cctggccgat tccgagctgc
      181 ggacccgcat ccagaccatg gcggccgaag gtgatcggga tgaggcggcg ctcctcgcgg
      241 acgtgagcct ctacctcgac gagatcatcc ccagcttcaa cctcatcacc acgtaccgct
      301 acggcaagcg catcgcaggc tggctgctcc gtacctgcta ccgggtacgc atcggtcgca
      361 gcgccgaggc ggcgctcaat cgcatcccgc gggacgcctc cgtcgtctac gtgatgaacc
      421 accgcagcaa cgccgactac ctgctggtgg cgttcctgct ggccaaccgc gtctccattt
      481 cctacgccgt gggggaatgg gcgcgggtct ggcccctgga gcgcctcttc cgcagcttcg
      541 gctccttctt cgttcgccgc cgcttccgcg acccgctcta ccacgcggtg ctggagcgct
      601 acgtgcagcg ggccgtggcc cagggcacca cccagggcat cttcatcgag ggcggcctca
      661 gccgcgatgg ccgtctgcag ccgcccaagc tgggcctgct ggactacatg ctgcgggccg
      721 gggcgaagga gctggtgttc atccccgtgg gcatcaacta cgaccgcgtg gtggaagaca
      781 gcaacctggt gcgcgaggcc gtggggaagc cgcgccgcag tcccattgcg ctgatccgga
      841 ggacttccct ctggctgctc gggctcgtct ggcgcggcgc cacgggccgc ttccaccggt
      901 ttggctacgc cgtggccaat ttcggaaccc ccatccacgc ccgctccgcc ctggaggggg
      961 ccgatctgcg cagcctggat tgggaggccc gccgccccct gctcgaagcc ttcgccgatt
     1021 ccctggtgcg cgccgtcggc gcggaagtgc ccatcacccc cgtggctgcg gtggcctggg
     1081 cctacctgaa cctgggcgag gccgccccgg gccgggcgca tcttcgggac cgcctgcttg
     1141 aagtgctcgc ctcggcccag gaccggggac tccccctgta cctgccgcgg ggctcgtacc
     1201 agcgcacctt cgacgtgggg ctgcgggtcc tcctgctgcg gcgcatcctc ctgctggaag
     1261 agggccgcct ggtgctgccg ccccacaaac ggcccctgct cgactactac tgcaacggcg
     1321 tgtcccacct gctggaaagg acccggaccc actagactgg gagattcccc cccggagttc
     1381 tcatgtccaa gcttgtccgc atcgccaatg gccagggttt ctggggggac agcattgatg
     1441 cgccggtgcg cctggtcgaa gccggcggca tcgactacct gaccctggac tacctcgccg
     1501 aggtcacgct ctccatcatg caaaagcagc ggcgcaagga tccccagctg ggctacgcca
     1561 ccgacttcgt ggacctcatg aagcgcgtgc tgccccagct caaggccaag ggcatccgcg
     1621 tggtggccaa cgccggcggc gtgaaccccg aagcgtgccg ggcggccgtg ctggatgtcg
     1681 ccaggaaact gggcgtctcg ggcctgaaga tcgccacggt caccggggac gacgtgctcg
     1741 cgcgcctgcc ggaattccag agccagggcc tgaccttgac gaacatggac accggcgagg
     1801 gcctcttcga cgcgccccgg gaaatcctca gcgccaacgt ctacctgcag acccaggcca
     1861 tggtggaggc gctcgacacc ggcgccgaca tcgtactcac gggccgctgc acggacccgg
     1921 gcctcaccct ggcgcccctg atccatgaat tcaagtgggc cgccgacgat tggaaccgcc
     1981 tcgccgccgg cacggtggcg ggccacatcc tggagtgtgg cgcccagagc acgggcggca
     2041 acttctctcg gtggtgggag gtgcccgaac tctggaacgt gggctacccc attgccgagt
     2101 gcgccgagga cggtaccttc gtcatcacca agcatgcggg caccggcggc atggtcacgg
     2161 tggatacggt gagcgagcag ctggtctacg agatgggcga tccccagaac tacatcacgc
     2221 cggacgtggt ggccgacttc accagcatcc gcctggagcc ggccggccca gaccgggttc
     2281 gggtctcggg catcacgggc aagccccgca cgcccttcct gaaggtgagc ggcgcctatc
     2341 tgaagggcta caaggccacg gggcagctga ccctcagcgg cccgcgggcc ctggacaagg
     2401 cccgcctttg cgcagacatc gtgtggaagc gcctgcacgc cgccggctgc gactacgacc
     2461 acacggacgc cgaattcctg ggcgccagca cggtccatgc cggcatcgcc ccggcccctg
     2521 tcgacccggc ggagatcgtg ctgcgcctca gcgtgaagga cgccagccgc aagaaggtcg
     2581 agcggttcgg ccggg
//
LOCUS       DATGWW010000091         1765 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_52933, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000091 DATGWW010000000
VERSION     DATGWW010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52933"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="VK150_01300"
     CDS             complement(<1..225)
                     /locus_tag="VK150_01300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29963.1"
                     /translation="MSNLPATPRAWACACLAGGLLAGAPPLPAAPQEGTTQAPPPAVT
                     TSLPEELIGFFSGDWVGKGAFASGRPLEAKV"
     gene            complement(249..680)
                     /locus_tag="VK150_01305"
     CDS             complement(249..680)
                     /locus_tag="VK150_01305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29964.1"
                     /translation="MKPSLSFLVLAAFGNALYHIGQKSMPPTANPMVLLMVVYAIAFL
                     LTGLAAPFFPNTPSLAASISSALSWPILALAFGVALVEVGFLLAYRLGGSLQWYGAAV
                     NGLTVLLLVPVAILVFREAFSPLRLLGVATTLVGLVLMTRS"
     gene            complement(756..1310)
                     /locus_tag="VK150_01310"
     CDS             complement(756..1310)
                     /locus_tag="VK150_01310"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HLP29965.1"
                     /translation="MASDPALESAVTASVFVGISVDGFLARPDGDLDWLPEGGGEAHG
                     FDEFLAGVDALIMGRNTYEKVLTLGPWPYGTTRVVVLSHHPVDLSRAVGGVVAQMAGS
                     PAEVASRLAAEGAHHLYVDGGITIQAFLRAGLVRRLILTRVPVLLGEGIPLFGVLPRD
                     IRLRHVATRAFPSGLVQSEYHVIP"
     gene            complement(1501..>1765)
                     /locus_tag="VK150_01315"
     CDS             complement(1501..>1765)
                     /locus_tag="VK150_01315"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HLP29966.1"
                     /translation="YFRSDHYSFVQAGVPALSVGGGRDYLGADVAALKAMASAYGKRY
                     HQVTDEYDPGWNLGGMVQQAQFTLDLGQAVANAASRPTFKAAR"
BASE COUNT          297 a          559 c          693 g          216 t
ORIGIN      
        1 caccttggcc tcgagggggc ggccgctggc gaaggcgccc ttccccaccc agtcgccgga
       61 gaaaaacccg atgagctcct cgggcaggga ggtggtcacg gctggcgggg gcgcctgggt
      121 cgttccttcc tgcggtgccg cggggagcgg gggcgctccg gccaggagac cgccagccag
      181 gcaggcgcag gcccaggcgc ggggtgtggc cggaaggttc gacatggtgc cctccatcca
      241 ggagtggatc agctccgcgt catcagcacc aggcccacga gggtggtggc gacgcccagg
      301 aggcgcaggg gcgagaaggc ctcgcggaag acgagaatgg ccacaggcac caggaggagc
      361 acggtgaggc cgttcacggc agcgccgtac cactggaggg agccgcccag gcggtaggcc
      421 aggaggaagc ccacctccac cagcgccacg ccgaaggcga gggccaggat cggccagctg
      481 agggcggacg aaatagaggc ggcgaggctg ggcgtgttcg ggaagaaggg cgccgccagg
      541 ccggtcagga ggaaggcgat ggcgtagacc accatgagca ggaccatggg gttggccgtg
      601 ggcggcatgg atttctgccc gatgtggtag agcgcattgc cgaaggcggc gagcaccagg
      661 aaggacaggg acggcttcat cggatctcgg aatcgggtcg gaccgcaggg cccaaggagg
      721 atggatgttc cgcggcggcg ggtaccgggc cgggactagg ggatcacatg gtactcgctc
      781 tggacgaggc cgctggggaa ggcccgggtg gccacgtgcc gcaggcggat gtcccgcggc
      841 agcacgccga acaggggaat gccttcgccg agcagcacgg gcacccgggt gaggatgagg
      901 cgccgcacga gccccgcccg gaggaaggcc tggatggtga ttccgccatc gacatagagg
      961 tggtgggcgc cctccgcggc caggcgggag gcgacttcgg ccggagaacc cgccatctgc
     1021 gccaccacgc cgcccacggc ccgggagagg tccaccgggt ggtggctcag caccacgacg
     1081 cgcgtggttc cgtacggcca gggcccgagg gtgagcacct tctcgtaggt gttccggccc
     1141 atgatcaggg catccacgcc ggccaggaat tcgtcgaagc cgtgggcttc gccgccgccc
     1201 tccggcagcc agtcgaggtc gccatccggg cgcgcgagga agccgtccac actgatgccg
     1261 acgaacacgg aggcggtcac ggcggattcg agggccggat cagaggccat cgcaggcccc
     1321 cagcgcggcc tcttcggcct gtgtctcgaa ccagggacag gtgccgacgg tctgcatgcg
     1381 cgctcctgga ggattccgga tgggaggaga gccccgaccc gcggacggcg cggccgcacc
     1441 gagggtacgg ccagggttcc ggttccgcca cggagaacgg gattcggtcg cgggccgaac
     1501 ctaccgggcg gccttgaagg tgggcctgct ggccgcattg gcgacggcct ggccgaggtc
     1561 cagggtgaac tgggcctgct gcaccatgcc gcccaggttc cagccggggt cgtattcgtc
     1621 ggtcacctgg tggtagcgct tcccgtaagc ggaagccatg gccttcaggg ccgcgacgtc
     1681 ggcgccgagg tagtcgcggc cgcccccgac ggacagggcg ggcacgcccg cctgcacgaa
     1741 gctgtagtgg tcggagcgga agtag
//
LOCUS       DATGWW010000092         1927 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_414397, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000092 DATGWW010000000
VERSION     DATGWW010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_414397"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1346
                     /locus_tag="VK150_01320"
     CDS             <1..1346
                     /locus_tag="VK150_01320"
                     /inference="COORDINATES: protein motif:HMM:NF001964.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HLP29967.1"
                     /translation="YQGRAINLLDTPGHQDFSEDTYRALTAADAVVMLLDCAKGVEEQ
                     TKKLFRVARERRLPIFTFVNKLDRPGREPVELIDEVEELFGLHAVPMTWPIGSGTDFK
                     GVYVRATGQIQVFERAKAGRKARVAGQGGLDDPEIAALLTPAELQQLKDDVDLMDHVL
                     PAFDREAFLRGEQSPMFFGSAVNNFGVAEFLEEFLDLAPAPGARPLMNGGDISPEQPF
                     TAFVFKVQANMNKAHRDRVAFARIVSGRFERGMDALHVREKKSIKLNYPHMFFGRERQ
                     IVDEAYPGDILGLINPGLFRIGDVLSAQGAVEFHAVPRFSPEQFASVRLADPGARKGF
                     LKGLGQIAEEGVVQVFWPKGGAPLPILGAIGRLQFEVLQHRLKEEYACPVLLEPRGFQ
                     MARWIQGGWPEPSKFWGELVEDTEGNPAILFENDWQRRTTAEKCPGLTFLEHPPK"
     gene            complement(1391..>1927)
                     /locus_tag="VK150_01325"
     CDS             complement(1391..>1927)
                     /locus_tag="VK150_01325"
                     /inference="COORDINATES: protein motif:HMM:NF013916.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29968.1"
                     /translation="LGCAAIGYTIYPGSGARNEQYENLRELILEAKAVGLPTVVWSYP
                     RGAGLSKDGETAVDVAAYAAQIAAQLGAHIIKVKPPKKHLEVKEAAAAFEKNGIVIET
                     LADRVREVVRSAFNGRRIVIFSGGEAKGTEDVLKEVAELAAGGAFGSIMGRNAFQRPK
                     AEAIQLLRTVMDMFKNAK"
BASE COUNT          295 a          667 c          644 g          321 t
ORIGIN      
        1 agtaccaggg ccgggccatc aacctgctgg acaccccggg ccaccaggat ttcagcgagg
       61 acacctaccg ggccctcacg gccgccgacg ccgtggtgat gctgctggac tgcgcgaagg
      121 gcgtggagga gcagaccaag aagctcttcc gcgtggcccg ggagcgccgg ctgcccattt
      181 ttaccttcgt caacaagctg gatcgccccg gccgcgagcc cgtggagctc attgacgaag
      241 tggaagagct cttcggcctt cacgccgtgc ccatgacctg gcccatcggt tcgggcaccg
      301 acttcaaggg cgtctacgtg cgggccacgg gccagatcca ggtcttcgag cgggccaagg
      361 ccggccgcaa ggcccgggtg gccgggcagg gcgggctgga cgatcccgag atcgccgcgt
      421 tgctcacccc cgccgagctg cagcagctga aagacgacgt ggacctcatg gaccacgtgc
      481 tgcccgcctt cgaccgggaa gccttcctgc ggggcgagca gtcgcccatg ttcttcggct
      541 cggccgtgaa caacttcggc gtggccgagt tcctggagga attcctggat ctggctccgg
      601 ccccgggcgc gcgccccctc atgaacggcg gggacatctc gcccgagcag cccttcacgg
      661 ccttcgtgtt caaggtgcag gccaacatga acaaggccca ccgcgaccgc gtggccttcg
      721 cccgcatcgt ctccggccgc ttcgagcgcg gcatggacgc cctgcacgtg cgcgagaaga
      781 aatccatcaa gctcaactac ccccacatgt tcttcggccg cgagcggcag atcgtggacg
      841 aggcctatcc cggcgacatc ctgggcctca tcaacccggg cctcttccgc atcggcgacg
      901 tgctgagcgc ccagggggct gtggagttcc acgccgtgcc gcgtttctcc cccgagcagt
      961 tcgcctccgt gcgcctcgcc gaccccggcg cccgcaaggg cttcctgaag ggcctgggcc
     1021 agatcgccga agagggcgtg gtgcaggtgt tttggcccaa gggcggcgcg cccctgccca
     1081 tcctgggcgc catcggccgc ctgcagttcg aggtgctcca gcaccgcctc aaggaggaat
     1141 acgcctgccc ggtgctgctg gaaccccggg gcttccagat ggcccgctgg atccagggcg
     1201 gctggcccga gcccagcaag ttttggggcg agctggtgga agatacggag ggcaatcccg
     1261 ccatcctgtt cgagaacgac tggcagcggc gcacgacggc ggagaagtgc ccgggactga
     1321 ccttcctgga acatcccccc aaatgaaaaa cggcgcctcg gcgccgtttt tcatggaacc
     1381 gcagtcgaag ctacttcgcg ttcttgaaca tgtccatgac ggtgcggagc agctgaatgg
     1441 cttcggcctt ggggcgctgg aaggcgttgc ggcccatgat gctgccgaag gcgccgccgg
     1501 cggccagctc ggccacttcc ttgagcacgt cctcggtgcc cttggcttcg ccgccgctga
     1561 aaatcacgat gcggcgcccg ttgaaggcgc tgcgcaccac ttcccgcacg cggtcggcca
     1621 gcgtctcgat gacgatgccg ttcttctcga aggccgcggc ggcctccttc acttccaggt
     1681 gcttcttggg cggcttcacc ttgatgatgt gggcgcccag ctgggcggcg atctgggccg
     1741 cgtaggccgc cacgtccacg gcggtctcgc cgtccttgct gaggcccgcg cctcgggggt
     1801 aggaccacac gacggtgggc aggcccacgg ccttggcctc gaggatcagc tcgcgcaggt
     1861 tctcgtattg ctcgttgcgg gcgccgctgc cggggtagat ggtgtagccg atggcggcgc
     1921 agcccag
//
LOCUS       DATGWW010000093         2272 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_319975, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000093 DATGWW010000000
VERSION     DATGWW010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2272
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319975"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="VK150_01330"
     CDS             complement(<1..469)
                     /locus_tag="VK150_01330"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLP29969.1"
                     /translation="MIALEGVWRTYPMGEGVVHALRDITLTIDPGEHLALIGPSGSGK
                     STLLHILGCLDRPTRGRYRFEGREVGALPDGERSLLRRNRIGFVFQFFHLLPRLTALG
                     NVELPMLFGGISRDERRERASRALAAVGLLPRAAHRPDQLSGGERQRVAVARAL"
     gene            complement(466..1611)
                     /locus_tag="VK150_01335"
     CDS             complement(466..1611)
                     /locus_tag="VK150_01335"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HLP29970.1"
                     /translation="MRRVPRWAVVLLAVGVAAAALKLLVFREPGLVVKVARAEAGLVE
                     EIITNTRAGTVKAHRRAKLSPQLGGLVTALPHRKGGRVAAGDLLLQLEDSIQRAQLSL
                     AEEQVRSAEARTREACLAATLAEKELARGLALARDGVLSQQGLDALQSGRDRASATCQ
                     ALRATLDEAQAQVKLARAQLALTQIRAPFAGIVAECSGEVGEWITPSPPGIPIPAVLD
                     LLDPASLYISAPIDEVDSQRVKAGLPVRVAVDSRPGEKLAGRLDRVAPYVLDLQEQNR
                     TVEIEVVLEDPQAAQGFLPGTSSDVEVILARRDGVLRIPTSAIAEGAKVLVLEGGHLV
                     ERAVRTGLRNWQYTEVLSGLAAGDLVVTARDSTEVRPGARARGREGP"
     gene            complement(1697..>2272)
                     /locus_tag="VK150_01340"
     CDS             complement(1697..>2272)
                     /locus_tag="VK150_01340"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HLP29971.1"
                     /translation="LVGSVVEAHAPHPRNAAFVTAPDGSLLAAYRKLHPFSYGEENRH
                     YSGGTECPLFQVDGIPCGLQICYDLRFPEPFRALAARGAEVVFVPANWPLRRISAWST
                     LLAARAIENQMAVCGVNRVGRDAPFHDAHGLDYPGASALHDCFGDVIAKGDATEDLVV
                     GDLDLAQLRAWRERFPALKDRRPEVYARLGG"
BASE COUNT          322 a          814 c          851 g          285 t
ORIGIN      
        1 cgagcgcccg ggcgaccgcg acccgctgcc gctccccgcc cgagagctgg tctggccggt
       61 gggccgcgcg gggcaggagc cccacggcgg ccagggcccg cgaggcccgc tcgcggcgct
      121 cgtcccggga gatcccgccg aacagcatgg gcagctccac gttgccgagc gcggtaagcc
      181 tcgggagcag atggaagaac tggaagacga agccgatgcg gttccgccgc agcagggatc
      241 gctcgccgtc cgggagggcg cccacctccc ggccctcgaa gcggtagcgg ccccgggtgg
      301 ggcggtcgag gcagccgagg atgtgcagca gcgtggactt gcctgagccc gagggcccga
      361 tgagggcgag gtgctcgcct gggtcgatgg tcagggtgat gtcccgcagg gcgtgcacca
      421 ccccctctcc catggggtag gtgcgccaga cgccctcgag ggcgatcatg gcccttcccg
      481 gccccgggcc ctggcgcccg gacggacctc cgtggagtcc cgcgcggtga ccaccaggtc
      541 tccggccgcg aggcccgaga ggacctccgt gtactgccag ttgcgcaggc cggtccggac
      601 ggcgcgctcc accagatgcc cgccctccag cacgaggacc ttcgcgccct cggcgatggc
      661 ggaggtgggg atgcggagca ccccgtcgcg ccgggccagg atcacctcga cgtcactgga
      721 ggtcccgggc aggaacccct gcgccgcctg gggatcctcc agcaccacct cgatctccac
      781 cgtgcggttc tgctcctgga ggtccagcac gtacggcgcc acccggtcca ggcggcccgc
      841 cagcttctcg ccggggcgcg agtcgacggc gacgcgcacc ggcagcccag ccttcacccg
      901 ctgggaatcc acctcgtcga tgggcgcgct gatgtagagc gaagcgggat cgaggagatc
      961 cagcaccgcg gggatgggaa tgcccggagg cgagggcgtg atccattcgc ccacctcgcc
     1021 cgaacactcc gccacgatcc cggcgaacgg cgcccggatc tgcgtgagcg cgagctgggc
     1081 gcgggcgagc ttcacctggg cctgggcttc gtccagggtg gcgcgcaggg cctggcaggt
     1141 ggccgaggcg cgatcccgtc cgctctgaag ggcgtcgagc ccctgctggc tgaggacgcc
     1201 gtcccgggcg agggccaggc cccgcgccag ctccttctcc gcgagggtgg ccgcgagaca
     1261 ggcctcccgc gtgcgcgcct cggcggaccg gacctgctcc tccgcgaggc tgagctgggc
     1321 ccgctggatg gaatcctcga gctgcaggag caggtccccc gcggccacgc ggccgccctt
     1381 ccggtgaggc agggccgtca ccaggccccc gagctggggg gagagcttgg cccgtcgatg
     1441 ggccttcacc gtccccgccc gggtattggt gatgatttct tccaccagcc ccgcctcggc
     1501 ccgcgcgact ttcaccacca ggcccggctc ccggaacacc agcagcttga gggccgccgc
     1561 cgcgaccccg accgcgagga ggacgacggc ccagcgaggc accctgcgca tgcctacaat
     1621 ctaggtcccg tggccagcgc aggaaggggc gaaccgggat tccctccccg gatcccgagt
     1681 ccaggtatcg acaggttcat ccccccaggc gggcgtagac ctccggccgg cggtccttca
     1741 gtgccgggaa ccgttcccgc caggcgcgga gctgggcgag atcgagatcc ccgaccacca
     1801 ggtcctcggt ggcgtctccc ttcgcgatga cgtcgccgaa acagtcatgc agggcggagg
     1861 cgccggggta gtcgaggcca tgggcgtcgt ggaagggggc gtcgcggccc acgcggttca
     1921 cgccgcagac ggccatctgg ttctcgatgg cccgggcggc gaggagggtg gaccaggcgg
     1981 agatccgccg caggggccag ttggcgggca cgaagaccac ctcggcgccc cgcgcggcca
     2041 gggcgcggaa gggctcgggg aagcgcaggt cgtagcagat ctgcaggccg caggggatgc
     2101 cgtccacctg gaacaggggg cactcggtgc cgccgctgta gtggcggttc tcctcgccgt
     2161 acgagaaggg atggagcttg cggtaggcgg cgagcaggct gccgtccggg gcggtgacga
     2221 aggcggcgtt gcgcggatgg ggcgcgtggg cctccacgac ggagcccacg ag
//
LOCUS       DATGWW010000094         2208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_319990, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000094 DATGWW010000000
VERSION     DATGWW010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319990"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1166)
                     /locus_tag="VK150_01345"
     CDS             complement(<1..1166)
                     /locus_tag="VK150_01345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29972.1"
                     /translation="MQLLDWPFLDALQTGALAALFVSFGTDALSRRDRMMGWLALTCL
                     LVGTRHAVLAIGTHPSANPDLVDRAQSLLVLLGFLALCAALTRLFPKHVPARFPGWIA
                     LAMTPNFIRNLFLPHPSLAETWMHHLSNVVYLVGCGMIILWTLRAKQDGDPMGRRLFI
                     GFLGVTLPVVVEVAAFSLFNLKIRLSGFSLVILAMAIGTSWQWLVVNTMESRIRRAED
                     EAEVWRSLLPGNAFRTDRPSALMERLFGNAWTERIKASPDAPLVGTDGATYRIRTRPL
                     YQHHRMGWFERDDDTLPGGHGFLSGWTVGLGVDDAVENQRLLTLLRSWGADVELWGTV
                     PPREGPYPSVLLWAREPSILAVWREDDLLRRRPRWIQIGGPITEGPHGRLEPGAP"
     gene            1279..>2208
                     /locus_tag="VK150_01350"
     CDS             1279..>2208
                     /locus_tag="VK150_01350"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLP29973.1"
                     /translation="MIAFENLEVRYAATAAPALKGLTLSLERGIVGLLGPNGAGKSTL
                     LKTLLGLLKPSRGSGTVLEVALGAPEAARLRGRIGYMPEYDALIEDASAYEQVAFWGE
                     LSGLAPEAARDRAHEVLYFVGLDESRYRPVSGYSTGMRQRVKLAQALVHSPELIFLDE
                     PTNGLDPDGRRRMLDLVLRVHAELGTGVILASHLLGDVERVADQLVILDQGQIKAAGS
                     MAGLRRALAKRVELRFLDPLSPAQEAALADLGVVLEARNGLYDLELTEADPTGAFRWA
                     EAHGATLVQVTPRHDRLDEVLLRALHPDAVRGTD"
BASE COUNT          347 a          747 c          797 g          317 t
ORIGIN      
        1 ggagcgcccg gctccaggcg gccgtgggga ccttcggtga tgggtccgcc gatctgaatc
       61 caccggggcc gccgccggag caggtcgtcc tcgcgccaga cggccaggat gctcggctcc
      121 ctggcccaga gcagcacgct cgggtagggg ccctcccggg gcgggacggt gccccagagc
      181 tccacatcgg cgccccagga cctgaggagt gtgagcagcc gctggttctc gacggcatca
      241 tccacgccca ggcccacggt ccagccggag aggaagccat ggcccccggg cagggtgtcg
      301 tcgtcgcgtt caaaccaacc catgcggtgg tgttggtaca ggggacgggt ccggatccgg
      361 taggtcgcgc cgtccgtgcc gaccaagggc gcgtccggac tggccttgat ccgctccgtc
      421 caggcgttgc cgaacagccg ttccatcagg gccgagggcc ggtcggtgcg gaacgcattc
      481 cccggaagga ggctccgcca gacctcggcc tcgtcctcgg ccctgcggat gcgggattcc
      541 atggtgttca ccacgagcca ttgccaggag gtgccgatgg ccatggcgag gatcaccagg
      601 ctgaagccag aaagccggat cttcaggttg aacaggctga aggccgccac ctccaccacc
      661 accggcaggg tcacgcccag gaacccgatg aagagcctgc ggcccatggg gtcgccatcc
      721 tgtttggccc ggagggtcca gaggatgatc attccgcagc ccaccaggta gaccacgttg
      781 gagaggtggt gcatccaggt ctcggccagg ctcgggtggg gcagaaagag gttccggatg
      841 aaattcggcg tcatcgccag ggcgatccag cccgggaaac gggcgggcac gtgtttggga
      901 aacaggcggg tgagcgcggc gcagagggcg aggaagccga gcaggaccag gaggctctgg
      961 gcgcggtcca ccaggtcggg gttcgcgctg gggtgggtgc cgatggccag caccgcgtgg
     1021 cgggtgccca ccagcaggca ggtgagcgcg agccagccca tcatccggtc gcgacgggag
     1081 agggcgtccg tgccgaagct cacgaacagc gccgcgagtg cccccgtctg cagggcgtcg
     1141 aggaagggcc agtccaggag ctgcatgtgg aaccgtccag agcgtgggag gatgatgccg
     1201 tacagcctaa tccaacttgg atccggctcg tagccgcctc attccggaca ttgccgtgaa
     1261 cccgccctgg aggccccgtt gatcgccttc gagaacctgg aagtgcgcta cgccgcgacg
     1321 gccgcgccag ccctgaaggg cctgaccttg agcctggaac gcggcatcgt ggggctcctc
     1381 gggcccaacg gcgccggcaa atccacgctg ctgaaaaccc ttctggggct gctgaagccc
     1441 tctcgggggt cgggcacggt gctcgaggtg gccctcggag cgcccgaagc tgcccggctc
     1501 cgcggccgca tcggctacat gcccgagtat gacgccctca tcgaggacgc ttcggcctac
     1561 gagcaggtgg ccttctgggg cgagctgagc ggcctggccc ccgaagcggc ccgggaccgg
     1621 gcccacgagg tgctctattt cgtggggctg gacgaatcgc gctaccggcc cgtcagcggc
     1681 tactccacgg gcatgcggca gcgggtgaag ctggcccagg cgctggtgca cagccccgag
     1741 ctgatcttcc tggacgagcc caccaacggc ctcgatcccg acggccgccg ccgcatgctg
     1801 gacctggtgc tgcgcgtcca cgccgagctg ggcacgggcg tcatcctcgc gtcccacctg
     1861 ctgggcgatg tggagcgcgt ggccgaccag ctggtgatcc tcgaccaggg ccagatcaag
     1921 gcggcgggct ccatggcggg actccgccgg gcccttgcca agcgggtgga gctgcggttc
     1981 ctcgatcccc tgtccccggc ccaggaggcg gccctggccg acctgggcgt ggtgctggag
     2041 gcccggaacg gcttgtatga cctggaactc acggaggccg atcccaccgg cgcgttccgc
     2101 tgggccgagg cccacggcgc cacgctggtg caagtcacgc cgcgccacga ccgcctggac
     2161 gaggtgctcc tccgtgcgct gcatcctgat gctgtccggg ggaccgac
//
LOCUS       DATGWW010000095         1564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_139553, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000095 DATGWW010000000
VERSION     DATGWW010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139553"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..354)
                     /locus_tag="VK150_01355"
     CDS             complement(<1..354)
                     /locus_tag="VK150_01355"
                     /inference="COORDINATES: protein motif:HMM:NF013773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29974.1"
                     /translation="MTTPILIAFPKGRLGDELVPKLADTPLALDPVALKSRVLRIPTA
                     TPGVSALLLKGADLPRYVAAGVASLGIVGSDTLDEMDMDLLELADLGFGACRLSLCAL
                     AGVTLDALRARPHLRL"
     gene            complement(354..1319)
                     /locus_tag="VK150_01360"
     CDS             complement(354..1319)
                     /locus_tag="VK150_01360"
                     /inference="COORDINATES: protein motif:HMM:NF024785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HLP29975.1"
                     /translation="MPVRTPHFPDLLFGSAARLRRWEAALMGLLAEQGYRELHPSLVL
                     REAVPEGALRFFDGDDLVALRWDFTVALAGLLARSFPAPPPRVAYAGAVFRRPVQPWE
                     AVERFEVGCERIQQEGESSTEADVELARLLMAIPGVLGLKSAILHLGNAALVRRPLEV
                     EGIFGDLAEATVAALSRRSPHRVREALDGHPSAARLTAHAEALLAELDGPGTLAALDT
                     SPYADLLEDERHHMDRALKALLPILPPNLELRVDLADVAGLGFYTGPTLRLWAPGAQQ
                     ELAAGGRYDQLFPRLGRPWQAAGFCVRLSRLLDLADTRPDLFEAP"
     gene            complement(1319..>1564)
                     /gene="hisE"
                     /locus_tag="VK150_01365"
     CDS             complement(1319..>1564)
                     /gene="hisE"
                     /locus_tag="VK150_01365"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF015758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HLP29976.1"
                     /translation="DRIAKKVVEEAGEVILAAKNEDREAFLGEAADLLFHLDLLLIER
                     GASLLDVVGVLHDRHAERHDRQAERQDRHAERPGGPA"
BASE COUNT          227 a          535 c          613 g          189 t
ORIGIN      
        1 gaggcgcagg tgcggcctgg cgcgcagggc gtccagcgtg actcccgcaa gggcgcagag
       61 ggacaggcgg caggcgccga agccgaggtc ggccagctca aggaggtcca tgtccatctc
      121 gtccagcgta tcggagccga cgatgcccag cgaggccacg ccggccgcca cgtagcgggg
      181 caggtccgcg cccttgagca gcagcgccga gacgcccggc gtggccgtgg ggatgcggag
      241 cacccgcgac ttcagggcca cggggtccag cgccagcggc gtgtcggcga gcttcggcac
      301 gagctcgtca ccgagccggc ccttggggaa ggcgatgagg atcggcgtgg tcatcagggc
      361 gcctcgaaga ggtcgggccg ggtgtcggcc aggtcgagga ggcgcgagag gcgcacgcag
      421 aaacccgccg cctgccaggg acggcccagc ctcgggaaca gctggtcgta gcgacccccg
      481 gcggccagct cctgctgggc tccgggggcc cagaggcgca gggtgggtcc ggtgtagaag
      541 ccgagacccg ccacgtcggc gaggtccacc cgcagctcca ggttgggcgg gaggatgggc
      601 agcagcgcct tcagcgcgcg gtccatgtgg tggcgttcgt cttccagcag gtcggcgtag
      661 gggcttgtgt cgagggctgc gagggtgccg ggcccgtcca gttcggccag cagcgcctcg
      721 gcgtgggccg tcagccgcgc ggcggaagga tggccgtcga gggcctcccg cacccggtgg
      781 ggcgagcgcc gggagagggc cgccaccgtc gcctcggcca ggtcgccgaa gatgccttcc
      841 acctccaggg gacggcgcac cagggccgcg ttgccgaggt ggaggatggc gctcttgagg
      901 ccgaggacgc cggggatggc catgagcagc cgcgccagtt ccacgtcggc ctccgtggag
      961 gattccccct cctgttgaat gcgctcgcag ccgacctcga agcgctcgac cgcttcccag
     1021 ggctgcacgg ggcggcggaa caccgcgccg gcgtaggcca cccggggcgg cggggcgggg
     1081 aagctcctgg cgagcaggcc ggccagggcc accgtgaaat cccatcgcag ggccacgagg
     1141 tcatccccgt cgaaaaagcg cagggcgccc tcggggacgg cctcccgcag cacaagggag
     1201 gggtgcagct cgcggtaacc ctgctccgcc agcagcccca tgagagcggc ttcccagcgg
     1261 cgcagccggg cggcggagcc gaagaggagg tcggggaagt ggggggtgcg gaccggcatc
     1321 aggcgggccc tcccgggcgc tccgcgtggc ggtcctggcg ctccgcctgg cgatcatggc
     1381 gctctgcgtg gcggtcatga agcaccccca ccacgtccag caggctcgcg ccccgctcga
     1441 tgagcagcag gtccaggtgg aagagcaggt ccgcggcctc gccgaggaag gcctcgcggt
     1501 cctcgttctt ggcggcgagg atcacctccc cggcttcctc caccaccttc ttggcgatgc
     1561 ggtc
//
LOCUS       DATGWW010000096         1580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_414582, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000096 DATGWW010000000
VERSION     DATGWW010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_414582"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..543
                     /locus_tag="VK150_01370"
     CDS             <1..543
                     /locus_tag="VK150_01370"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HLP29977.1"
                     /translation="TRMSEGMEPLVLAGILNRTFEAMTDQIFSRGGTLDKYIGDAIMA
                     FFGAPNPDPDHARHAIEAAVAMQAALYSLNAARPEGYPELRMRIGINSGEAFAGDIGC
                     EKRMDYTVMGSTVNLASRLESSVAKPGQIVVGPRTADLAGDAELKPLAGFALKGIEQE
                     VHPFEVLWAHEAQTGVQISK"
     gene            646..933
                     /locus_tag="VK150_01375"
     CDS             646..933
                     /locus_tag="VK150_01375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29978.1"
                     /translation="MNDFQSAAPIKAHRGVMLLIFGILGIICCFIFAILAWVMGGNDL
                     KAMAAGQMDPSGEGLTKAAKILGIIGCVLAILSILWAVFFGGLAALGAMRS"
     gene            941..1351
                     /locus_tag="VK150_01380"
     CDS             941..1351
                     /locus_tag="VK150_01380"
                     /inference="COORDINATES: protein motif:HMM:NF022281.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2752 domain-containing protein"
                     /protein_id="HLP29979.1"
                     /translation="MKVRWERTTRVPRPPVWALILAGGWLLLVSLGVLLEQRGAATLE
                     TCLLHRLTGRPCPTCGSTRVVLGFARGAWLDALGMNPLVAAGLVLGAIWLGLRLVTGR
                     SLRWDLSAVERRIALTLGLALLLANWAWVLRTQA"
     gene            complement(1342..>1580)
                     /locus_tag="VK150_01385"
     CDS             complement(1342..>1580)
                     /locus_tag="VK150_01385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29980.1"
                     /translation="LFVHVTAGFGDIGFCGYWTLEISCIQPVRIYAGVAICQIFYHTV
                     SGEYDSYESGKYQRNSGIQPSMLWKDFVKSPDQA"
BASE COUNT          232 a          550 c          529 g          269 t
ORIGIN      
        1 acgcgcatga gcgagggcat ggagccgctg gtgctggcgg gcatcctgaa ccgcaccttc
       61 gaggccatga ccgaccagat cttcagccgc ggcggcaccc tggacaagta catcggcgac
      121 gccatcatgg ccttcttcgg cgcgccgaac cccgatcccg accacgcccg gcacgccatc
      181 gaggccgccg tggccatgca ggcggcgctc tattcgctga acgcggcccg ccccgagggt
      241 taccccgagc tgcgcatgcg catcggcatc aacagtggcg aggccttcgc cggcgacatc
      301 ggctgcgaga agcgcatgga ctacacggtc atgggcagca ccgtgaacct ggcctcccgt
      361 ctggaaagca gcgtggccaa gcccggccag atcgtcgtcg gaccccgcac ggcggacctg
      421 gctggcgacg cggagctgaa gcccctcgcc ggtttcgctc tgaagggcat cgagcaggag
      481 gtgcacccct tcgaggtgct gtgggcccac gaggcgcaga ccggggtgca gatctccaag
      541 taggtgtttc tgcccactat gcattgcgtg gcggcgcccc tacactgggc ccatccccca
      601 cctttccggg tcgaaacccg gccgagccgc tcccaggagc cacccatgaa cgacttccag
      661 tctgccgccc ccatcaaggc ccaccggggc gtgatgctcc tgatcttcgg catcctcggc
      721 atcatctgct gcttcatctt cgcgatcctc gcctgggtga tgggcggcaa cgacctgaag
      781 gccatggccg ccgggcagat ggatcccagt ggcgaggggc tcaccaaggc ggccaagatc
      841 ctcggcatca tcggctgtgt gctggccatt ctgtcgatcc tctgggcggt cttcttcggt
      901 ggcctcgccg ccctcggagc catgcgcagc taggttctgc gtgaaggtcc gctgggaacg
      961 caccacccgg gtgccccggc ccccggtgtg ggccctgatc ctagcgggcg gctggctgct
     1021 gctggtgtcg ctcggcgtcc tgcttgaaca gcggggcgcc gcgacccttg agacctgcct
     1081 gctccatcgc ctcacgggcc gcccctgccc cacctgcggc agcacgcggg tggtgctggg
     1141 gttcgcccgc ggcgcctggc tggacgccct ggggatgaat cccctcgtgg ctgcggggct
     1201 ggtgctgggc gcgatctggc tgggccttcg cctggtcacg ggccggtcgc tccgctggga
     1261 tctgagcgcc gtcgagcgcc gaatcgcgct gacgctgggc ctggccctcc tgctcgccaa
     1321 ctgggcctgg gtgctgcgca ctcaggcctg atcggggctc ttcacgaaat ccttccacaa
     1381 catcgacggc tggatgccgg agttgcgctg gtacttgccc gactcgtagc tgtcgtactc
     1441 accgctgacg gtgtggtaga agatctggca gatggccacg ccggcataga tgcgcacggg
     1501 ctggatgcag ctgatctcca gggtccagta gccgcagaag ccgatgtcgc cgaagccggc
     1561 ggtgacgtgg acgaagaggc
//
LOCUS       DATGWW010000097         2869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_320161, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000097 DATGWW010000000
VERSION     DATGWW010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320161"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..1457
                     /gene="murC"
                     /locus_tag="VK150_01390"
     CDS             90..1457
                     /gene="murC"
                     /locus_tag="VK150_01390"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR01082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HLP29981.1"
                     /translation="MFGKIQHIHFVGIGGIGMSGIAEVLANLGYQVSGSDLKESTVTQ
                     RLRGLGITVHLGHHGRAIEGAQVVVISSAVKGDNPEVVAAHAEKVPVIPRGEMLAELM
                     RMKYGIAVAGSHGKTTTTSMVAQVLSQGGIDPTIVIGGKLGTIGSNAKLGKGPFLVAE
                     ADESDGSFLMLNPTLATITNIDREHLDHYKDLEEIQDAFVAFANKVPFYGSVFLCMDD
                     PHAAAVRPRLKRQVRTYGTHPQVDIRARDIRQDGFRTFFKVTAHGEDLGAFSLGVPGH
                     HMVLNALAAIGIALELNVEHEVIRASLSSFTGADRRFHLKGEKGGVLVVDDYGHHPTE
                     ISATLAAARAGFPDRRIVAAFQPHRYSRTKALLEEFGTAFFEADSVVVTEIYPAGEQP
                     IQGVDGAAVAEALRSHGQKEVHLVGRVEDLPEALKRLTRSGDLLITFGAGSITQAGPA
                     FLDLA"
     gene            1460..>2869
                     /locus_tag="VK150_01395"
     CDS             1460..>2869
                     /locus_tag="VK150_01395"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HLP29982.1"
                     /translation="MVTRPLSALLCTLVSALPLAAGLPAGLLPVADHRPEVPQPDLGA
                     RYTPHHALVAYARSLAAAAPDRVRITTQNLTEEGREQVLLIISAPENLKRLDELKALN
                     AKLADPRRCSEEEARRIAETSPAFVWLGYSVHGLEASGSEAALAVAYHFASARSPEVR
                     QQLERVVLLLDLTQNPDGRALHLQAVAEAATPFNVHDPLDAQNTARWPGGRFNHRIFD
                     LNRDWAWQTQGETRAKARAFFEWNPQVAGDFHEMWAEASYYFPPTMQPIHEALPAAHA
                     GRWQTTFGQAVAKAFDASGWAYFSKDVFDLFYPGYGDTWPTFQGAVGMTFEVAGQGGL
                     AYKRLDGEVLTLEGRIRRHTAASLATVATAANGRQALLWDFQGARRERMALGDRAGAF
                     LLAEGDDPGRARALVDLLALNGIEVLRTTADLPLAGLEPIGLAASAGLPAGSYLVPLD
                     QPRGALAQALLEAEAHMGPK"
BASE COUNT          448 a         1105 c          917 g          399 t
ORIGIN      
        1 ccgtgccacc cgccagccta tgtccgccca tgtccgcccg cagaccgcca aggcggtatc
       61 ctggcggatt caagcatggg ggcgttcacg tgttcggcaa gatccagcac atccatttcg
      121 tgggcatcgg cggcatcggg atgtccggca ttgccgaagt gctcgccaac ctgggctacc
      181 aggtctccgg ctccgacctg aaggaaagca ccgtcaccca gcgcctccgc ggcctgggca
      241 tcaccgtgca cctcggccac cacggccgcg ccatcgaggg cgcccaggtg gtggtgatca
      301 gctccgccgt caagggcgac aatcccgaag tggtcgcggc ccatgccgag aaagtgccgg
      361 tcatcccccg gggcgagatg ctggccgaac tcatgcgcat gaagtacggc atcgccgtgg
      421 cggggtcgca cggcaagacc accaccacca gcatggtggc tcaggtcctc agccagggcg
      481 gcatcgaccc caccatcgtc atcggcggga agctcggcac catcggcagc aacgccaagc
      541 tgggcaaagg ccccttcctg gtagcggagg ccgacgagag cgacggcagc ttcctcatgc
      601 tgaacccgac gctggccacc atcaccaaca ttgatcgcga gcacctggac cactacaagg
      661 acctggagga gatccaggat gccttcgtgg ccttcgccaa caaggtgccg ttctacggat
      721 ccgtgttcct ttgcatggac gatccccacg ccgccgccgt acggccgcgg ctcaagcgcc
      781 aggtgcgcac gtacggcacc cacccccagg tggacatccg cgcacgggac atccgccagg
      841 atggcttccg caccttcttc aaggtgacgg cccacggcga agacctgggc gccttcagcc
      901 tgggcgtacc cgggcaccac atggtgctca atgccctcgc ggccatcggc atcgcccttg
      961 agctgaacgt cgagcacgag gtcatccgcg ccagcctctc cagcttcacc ggcgccgacc
     1021 ggcgcttcca cctgaagggc gagaagggcg gcgtgctggt ggtggacgac tacggccacc
     1081 atcccaccga aatatccgcc accctggccg cggcccgcgc ggggttcccc gaccgccgca
     1141 tcgtggcggc cttccagccc caccgctaca gccgcacgaa ggccctgctc gaggaattcg
     1201 ggaccgcctt cttcgaggcc gattccgtgg tggtgaccga gatctacccc gccggcgagc
     1261 agcccatcca gggcgtggac ggtgccgccg tggcagaagc gctgcgctcc cacggccaga
     1321 aggaggtcca cctcgtgggc cgggtggagg atctccccga ggccctgaag cgcctcaccc
     1381 gcagcggcga tctgctcatc accttcggcg cgggctccat cacccaggcc ggtccggcct
     1441 tcctggacct ggcctgacca tggtgactcg acccctcagc gccctgctct gcaccctggt
     1501 ctccgccctt ccgctggcag cgggccttcc ggcgggactg ctgcccgtgg cggaccaccg
     1561 gcccgaggtg ccccagcccg acctcggcgc ccgctatacg ccgcaccacg ccctggtggc
     1621 ctacgcgcga agcctcgccg ccgccgcgcc cgaccgggtc cgcatcacca cccagaacct
     1681 caccgaggag ggccgcgagc aggtgcttct gatcatcagc gctccggaga acctaaagcg
     1741 cctggatgag ctgaaggccc tgaacgccaa gctggccgac ccccggcgct gctccgagga
     1801 ggaagcccgg cggatcgcgg agaccagtcc cgccttcgtc tggctggggt actccgtgca
     1861 cggcttggaa gcctcgggct ccgaggccgc gctggccgtg gcctaccact tcgcctccgc
     1921 ccgcagcccg gaggtgcgcc agcaactgga gcgcgtggtg ctcctgctgg acctcaccca
     1981 gaatcccgat ggccgggcgc tccacctgca ggcggtggcc gaggccgcca cccccttcaa
     2041 cgtgcacgac ccgctggacg cgcagaacac cgcccgctgg cccggcggcc gcttcaacca
     2101 ccggatcttc gacctgaatc gcgactgggc ctggcagacc cagggggaga cccgggccaa
     2161 ggcccgcgcc ttcttcgagt ggaaccccca ggtggcggga gatttccacg agatgtgggc
     2221 cgaggccagc tactacttcc cccccaccat gcagcccatc cacgaggccc tgcccgccgc
     2281 ccacgcggga cgctggcaga ccaccttcgg ccaggccgtg gcgaaggcct tcgacgcctc
     2341 gggctgggcc tacttctcca aggacgtctt cgacctcttc taccccggct acggcgatac
     2401 ctggcccacc ttccagggcg ccgtgggcat gaccttcgaa gtcgcgggcc agggcggcct
     2461 cgcctacaag cgcctcgacg gcgaggtgct caccctggag ggccgcatcc ggcgccacac
     2521 cgccgccagc ctggccaccg tcgccaccgc cgcgaacggg cgccaggccc tgctctggga
     2581 tttccagggc gcgcggcgcg aacgcatggc cctgggcgac cgggccggcg ccttcctgct
     2641 ggccgagggg gacgaccccg ggcgggcccg ggccctggtg gacctgctgg cgctgaacgg
     2701 catcgaggtg ctgcggacca cggccgatct gcccctcgcc ggccttgagc ccatcggcct
     2761 cgccgcgtcg gccggcctgc ccgcgggaag ctacctggtg cccctggacc agccgcgggg
     2821 cgccctggcc caggccctgc tggaagctga ggcccacatg gggcccaag
//
LOCUS       DATGWW010000098         3441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_139651, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000098 DATGWW010000000
VERSION     DATGWW010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3441
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139651"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1322)
                     /locus_tag="VK150_01400"
     CDS             complement(<1..1322)
                     /locus_tag="VK150_01400"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HLP29983.1"
                     /translation="MSLPKKMKDHAVKHAEATEPHPEAARKQAAQGKLLARERITAIL
                     DQDSFHEYDLFVEHKCSDFGMEKKQLPGDGVITGTGTILGHPVAIFAQDFTVAGGSLG
                     LAHARKITKIMDHAIKMGIPLIGINDSGGARIQEGVNSLAGYGEIFYRNTLASGVIPQ
                     ISIILGPCAGGAVYSPALTDFVFVVDKISKMFITGPEVIKTVLGEEISMEDLGGARVQ
                     SELSGNAHFYAQSEAECFEQVKRLVTYIPWNNRKTADPFTARPPRVGTPLERIIPAES
                     NKPYDVRDVLRAVCDGSDFMEVQELWASNIVVGFARMDGRTVGMVANQPMVLAGVLDV
                     DSSDKAARFIRFCDAFNIPLVTFVDLPGYLPGVDQEHAGVIRHGAKLLYAYCEATVPR
                     IQVITRKAYGGAYVVMDSKSIGSDLSYAWPTAELAVMGPNGAVEIVYRR"
     gene            1530..1958
                     /locus_tag="VK150_01405"
     CDS             1530..1958
                     /locus_tag="VK150_01405"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HLP29984.1"
                     /translation="MRPLKQLIEGKRPAVTVGPEDTVFTALTLLAQYDIGALLVLERG
                     RLVGIFSERDYARKIILKGKTSKDTPVREIMSDKVSCVTLSQSVEECMALMTDKRIRH
                     LPVLGPGEQVIGILSIGDLVKETISDQKFTIDQLVHYIQT"
     gene            complement(2010..3149)
                     /locus_tag="VK150_01410"
     CDS             complement(2010..3149)
                     /locus_tag="VK150_01410"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLP29985.1"
                     /translation="MTVSRREFLQWSAAATALAATGLDLSAAPAKPSAKPSPKKILIL
                     GGTGFLGPATIEIAQARGHQVTMFNRGKTRPDLFPGVEKLHGDRDPKKGEGLKALETG
                     TWDAVIDNSGYYPRMVGASAALVAPRAKQYLYISSISAYKEPNPENGTEDAPLATMAD
                     PTQETMGKTYENYGALKALCEQAAEKAMPGRTTVIRPGYIVGPDDPTGRFTYWPVRFD
                     KGGELAVPGAPSDPVSIIDVRDLAAWLVHLVEQGTVGAFNACGPAKRLPWGELVAAFG
                     KAGNPNAKPVWIPADFLAKQEGIEFPIWAPFVGETKGFHTWRNDRAVKAGLTFRPALE
                     TVKDTLAWYKTQEKVEKGRTRLAGPSAEAEAKLIAAWREASKPKG"
     gene            3240..>3441
                     /locus_tag="VK150_01415"
     CDS             3240..>3441
                     /locus_tag="VK150_01415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP29986.1"
                     /translation="MTPDHPFRRLLRRLVLMEEGEAPALLWSTLYFFLLFFGFYLLRP
                     VREAIGIARGADKLPWLMTGTLL"
BASE COUNT          536 a         1090 c         1201 g          614 t
ORIGIN      
        1 cggcggtaca cgatctcgac cgcaccgttc ggacccatca ccgcgagctc ggccgtcggc
       61 caggcgtacg aaagatccga gccgatcgac ttcgagtcca tcaccacgta ggcgccgccg
      121 taggccttgc gggtgatgac ctggatgcgg ggcacggtgg cctcgcagta ggcgtagagc
      181 agcttggcgc cgtggcggat gacgccggcg tgctcctggt ccacgcccgg caggtagccc
      241 ggaaggtcca cgaaggtcac cagggggatg ttgaaggcgt cgcagaagcg gatgaaccgg
      301 gcggccttgt ccgagctgtc cacgtccagc acgcccgcca gcaccatggg ctggttggcc
      361 accatgccca cggtgcggcc gtccatgcgg gcgaagccca ccacgatgtt cgaggcccag
      421 agctcctgga cctccatgaa gtcggaaccg tcgcacacgg cccgcaggac atcccgtacg
      481 tcatagggtt tgttcgactc ggccgggatg atccgctcaa ggggcgttcc gacccggggc
      541 ggccttgccg tgaatggatc ggcggtcttc cggttgttcc aggggatgta ggtcaccagg
      601 cgcttcacct gctcgaagca ctccgcctcg ctctgggcgt agaagtgggc gttgcccgaa
      661 agctccgact gcacccgggc cccgccgagg tcctccatgg agatttcctc accgagcacg
      721 gtcttgatga cctcggggcc cgtgatgaac atcttcgaga tcttgtccac gacgaagacg
      781 aaatccgtga gggccggcga gtacaccgcg ccgccggcgc aggggccgag gatgatggaa
      841 atctgcggaa tgacgcccga ggccagggtg ttccggtaga agatctcgcc gtaacccgcc
      901 agggaattca cgccctcctg gatgcgggcg ccgccggaat cgttgatgcc gatgagcggg
      961 atgcccatct tgatggcgtg gtccatgatc ttggtgatct tgcgggcatg ggcgagcccc
     1021 agggatccgc ccgccaccgt gaagtcctgg gcgaagatgg ccacgggatg accaaggatg
     1081 gtgcccgtgc cggtgatgac gccgtccccg ggcagctgct ttttctccat gccgaaatcc
     1141 gagcacttgt gctcgacgaa gaggtcgtac tcgtggaagg aatcctggtc gaggatggcg
     1201 gtgatgcgct cgcgggccag cagcttgccc tgggccgcct gcttgcgggc cgcctcgggg
     1261 tggggctcgg tggcctcggc gtgcttgacc gcgtgatcct tcatcttctt gggcagggac
     1321 atcaggggcc tcgttggcgt accggtgcag ggatcggtag gaagatgact aatacatcgt
     1381 gaatgactat gccagggagt gattgaggca ttgatcacgg ttcaggtggt cggaccagtg
     1441 gattcacggg tttacagcag gcgggttcga cgtatagtca ggtccacgaa ccccacatcc
     1501 aggctggaac cgaaggcaga ggaggcacca tgcggccact gaagcagctg atcgaaggga
     1561 agcgtcccgc cgtgaccgtg gggccggagg acacggtgtt cacggccctg accctgctcg
     1621 cgcagtacga catcggcgcc ctgctggtgc tggagcgggg ccgtctcgtg ggcatcttct
     1681 ccgagcgcga ctacgcccgg aagatcatcc tcaagggcaa gacctccaag gacacccccg
     1741 tgcgggagat catgagcgac aaggtcagct gcgtgaccct cagccagtcg gttgaggagt
     1801 gcatggccct catgaccgac aagcgcatcc gccacctgcc cgtgctcggg cccggcgagc
     1861 aggtcatcgg catcctctcc atcggcgacc tggtcaagga gaccatctcc gaccagaagt
     1921 tcaccatcga ccagctggtg cactacatcc agacctagta cggaagaagc gccggggcgg
     1981 gccccggcgc ttcttcctgc cagcggccct cagcccttgg gcttggacgc ttcccgccag
     2041 gcggcgatga gcttggcttc ggcttcggcg ctggggccgg cgaggcgggt gcggcccttc
     2101 tcgaccttct cctgggtctt gtaccaggcc agggtgtcct tcacggtctc cagcgcggga
     2161 cggaaggtga ggccggcctt cacggcgcgg tcgttgcgcc aggtgtggaa gcccttggtc
     2221 tcgcccacga agggggccca gatggggaac tcgatgcctt cctgcttggc gaggaagtct
     2281 gcgggaatcc acacgggctt ggcgttcggg ttgccggcct ttccgaaggc ggcgaccagc
     2341 tcgccccagg gcaggcgctt ggcggggccg caggcgttga aggcgcccac ggtgccctgc
     2401 tccaccaggt gcaccagcca ggccgccagg tcgcgcacgt cgatgatcga caccgggtcg
     2461 ctgggcgcgc cgggcacggc gagctcgccg cccttgtcga agcgcacggg ccagtaggtg
     2521 aagcggccgg tgggatcatc ggggcccacg atgtagccgg ggcggatgac cgtggtgcgg
     2581 ccgggcatgg ccttttccgc ggcctgctcg cagagggctt tcagcgcgcc gtagttctca
     2641 taggtcttgc ccatggtctc ctgggtggga tcagccatgg tggccagggg cgcgtcctcg
     2701 gtgccgttct cggggttggg ctccttgtag gcgctgatgc tggagatgta gaggtactgc
     2761 ttggcccggg gcgccaccag cgccgccgaa gcccccacca tgcgcgggta gtagccgctg
     2821 ttgtcgatga ccgcgtccca ggtgccggtc tccagggcct tcaggccttc gcccttcttg
     2881 ggatcgcggt cgccgtgaag cttctccacg ccggggaaga gatcggggcg cgtcttcccg
     2941 cggttgaaca tggtcacctg gtgaccgcgg gcctgggcga tctcgatggt ggcggggccc
     3001 aggaagcccg tgccgccgag gatgaggatc ttcttgggcg aaggcttggc gctcggtttg
     3061 gcaggcgccg cggacaggtc gaggccggtg gcggccaggg ccgtggcggc ggcggaccac
     3121 tggaggaatt cacgtcggga cacggtcatg gtgacctccg gcaggggatg ggggttgatg
     3181 catcgtaaac cgatatatac tcgtttccgt ttcccttgca acccttttcc ggatggccca
     3241 tgacgcccga tcaccccttc cgccgcctgc tccgccgcct cgtgctgatg gaggagggcg
     3301 aggcgccggc cctgctgtgg tccaccctgt atttcttcct cctgttcttc ggcttctacc
     3361 tgctgcggcc cgtgcgcgag gccatcggca tcgcccgggg cgccgacaag ctgccctggc
     3421 tcatgacggg cacgctcctg g
//
LOCUS       DATGWW010000099         2209 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_139764, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000099 DATGWW010000000
VERSION     DATGWW010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2209
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139764"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..934)
                     /locus_tag="VK150_01420"
     CDS             complement(<1..934)
                     /locus_tag="VK150_01420"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HLP29987.1"
                     /translation="MATAFRFRVNQHGPAGSPVRESFTPEDPKPGWVRLELRAMALNR
                     LDLWTTEGLPGFPLPLPLTPGCDGAGVVEAVGQGTRLPPGVEAGGSVMIAPGLSCGVC
                     PACLRGDDMLCPTYGVLGHVCDGTAATHVLVPAANLLPIPGNWSFEQAAAFPLVFLTA
                     WEMLVHKAALRPGESVLIWGGGSGVGSAAIQLVKALGGMAVAVVGSEAKAMKCWELGA
                     EHVIVRGDLKALAAKVRDLVGKRGVDIVFEHTGAATWGTSLGICARGGRIVTCGATTG
                     RETTFDLRALFAKQIQIRGSYMGRREHLWTLLSLL"
     gene            complement(946..1947)
                     /locus_tag="VK150_01425"
     CDS             complement(946..1947)
                     /locus_tag="VK150_01425"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: protein motif:HMM:NF000942.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HLP29988.1"
                     /translation="MASRADIGVFGSGAWGTALAITWARAGANVALWGNFPDEMAQMA
                     ATRRHLRLKDVVFPEGLRTSDDPTEALAAPLWISAMPTQVTPEAWRGLRPRAPKAPES
                     LIHVSKGILQGTHQTLSQALTGVLDVPVGALSGPTFADEVSRGVPSAIVLALPAAYSD
                     AQAQALQAQLASEKLRIYLSRDVIGTELCGALKNVLAIAAGLVDGLGLGYNARAALIT
                     RGLAEMARLVEALGGQPATVMGLAGMGDLLLTATGPQSRNRTFGELVGKGHSVDAARD
                     ALGGQVIEGMFTTEAALDLGRVHGLELPITTEVQRLLRGESPQEAVRRLMTRSLKSE"
     gene            complement(1940..>2209)
                     /locus_tag="VK150_01430"
     CDS             complement(1940..>2209)
                     /locus_tag="VK150_01430"
                     /inference="COORDINATES: protein motif:HMM:NF014690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0043772 - acyl-phosphate
                     glycerol-3-phosphate acyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate acyltransferase"
                     /protein_id="HLP29989.1"
                     /translation="LMILPMATFIFVLWLTRHVSLGSILAAAMVPVPFLLLTGGFFGP
                     PKWLELVPWLLLVILVIWKHRENIKRLQEGTESKLWGAKKEVTHG"
BASE COUNT          330 a          769 c          806 g          304 t
ORIGIN      
        1 gcaggagcga gagcagcgtc cagaggtgct cccggcgccc catgtacgag ccgcggatct
       61 ggatctgctt ggcgaagagg gcacggaggt cgaaggtggt ctcccgtcct gtggtggcgc
      121 cgcaggtgac gatgcggccg ccccgggcgc agatgccgag gctcgtgccc caggtggcgg
      181 cgccggtgtg ctcgaagacg atgtccaccc cgcgcttgcc caccaggtcg cgcaccttgg
      241 ccgcgagggc cttgaggtcg cctcggacga ttacgtgctc cgcgcccagt tcccagcact
      301 tcatggcctt ggcctcgctg cccaccacgg cgacggccat gccgcccagg gccttcacca
      361 gctggatggc cgcgctgccc acgccgctgc cgccgcccca gatgagcacc gactcgccgg
      421 gccgcagggc cgccttgtgc acgagcatct cccaggccgt gaggaacacc agggggaagg
      481 cggcagcctg ctcgaagctc cagttgccgg gaatgggcag caggttcgcg gcgggcacca
      541 gcacatgggt ggccgcggtg ccgtcgcaga catggcccag cacgccgtag gtcgggcaga
      601 gcatgtcgtc cccgcgcagg caggcggggc atacgccgca gctgaggccc ggcgcgatca
      661 tgacgctgcc gccggcctcg actccggggg gaaggcgcgt gccctgcccc acggcctcca
      721 ccacgccggc gccatcgcag cccggcgtga gcggcagggg cagtggaaag ccgggcagcc
      781 cctcggtggt ccataggtcc aggcggttga gcgccatggc cctgagctca agcctcaccc
      841 aacccggttt cggatcttcc ggcgtgaagg actccctgac cggcgacccc gcgggtccgt
      901 gctggttcac gcggaatcgg aaggctgtgg ccacggggac ctccgctact cggacttgag
      961 ggatcgggtc atgagccgcc gcacggcttc ctggggcgat tcgccgcgga gcaggcgctg
     1021 cacctcggtg gtgatgggca gctccaggcc gtggacccgg cccaggtcca gggccgcctc
     1081 cgtggtgaac atgccctcga tcacctggcc acccagggcg tcccgcgccg cgtcgacgct
     1141 gtgccccttg cccacgagct cgccgaaggt tcggttgcgg ctctgggggc cggtggccgt
     1201 gagcagcaga tcgcccatgc ccgcgaggcc catcaccgtg gcgggctggc cgcccagggc
     1261 ctccacaagc cgggccatct cggcgagccc ccgggtgatg agggccgccc gggcgttgta
     1321 gccgagcccc agcccatcca cgagtcccgc ggcgatggcg aggacgttct tgagggcgcc
     1381 gcagagttcc gtgccgatga catcgcggct gaggtagatg cgcagcttct ccgaagccag
     1441 ctgagcctgg agggcctggg cctgggcgtc cgaataggcg gccggcaggg ccagcacgat
     1501 ggcggagggc accccgcgcg agacttcatc ggcgaaggtg gggccggaca gcgcgcccac
     1561 cggcacgtcc agcacgccgg tgagggcctg ggacagggtc tggtgggtgc cctggagaat
     1621 gcccttgctc acgtggatca gggattccgg agccttcggc gcccggggcc gaaggccgcg
     1681 ccaggcctcg ggggtgacct gggtgggcat ggcggatatc cagaggggcg cggccagggc
     1741 ctcggtcgga tcgtccgagg tgcgcagtcc ctcggggaag accacgtcct tcagccgcag
     1801 gtgccgccgc gtggcggcca tctgggccat ctcgtcgggg aagttgcccc agagggccac
     1861 gttcgccccg gcccgggccc aggtgatggc cagcgccgtg ccccaggcgc cggaaccgaa
     1921 gacgccgatg tccgcgcggc tagccatggg tcacctcctt cttggcgccc cagagcttgg
     1981 attcggtgcc ctcctgaagc cgcttgatgt tctcccggtg cttccagatc acgaggatca
     2041 ccaggagcag ccaagggacg agctccagcc atttcggagg cccgaagaac ccgcccgtga
     2101 ggaggaggaa cggcaccggc accatggccg ccgccaggat gctgccgagg ctcacatggc
     2161 gcgtcagcca cagcacgaag atgaaggtgg ccatggggag gatcatcag
//
LOCUS       DATGWW010000100         2021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_279236, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000100 DATGWW010000000
VERSION     DATGWW010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279236"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(77..1195)
                     /locus_tag="VK150_01435"
     CDS             complement(77..1195)
                     /locus_tag="VK150_01435"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLP29990.1"
                     /translation="MPKPLSHYRIVDLSCVLAGPFATQLLADLGAEVQKLEPPEGDPT
                     RGWGPPFEDGDHGESAYFRCANRGKKSQAVDLHTEEGKAVLFDLLKDADVLVENFRAD
                     STDRLGLGWKRLHAKFPKLIVASVRGFASDVTASRRAGYDFIIQAESGWMAITGEPEG
                     RPMKVGVALVDVLTGLYCANGIQAALLHRERTGEALHIEVPLMEAALAGLVNVAAGAL
                     MTGTPPKRWGNAHPQIVPYQSFRCSDGDVAIGVGSDRQFEVLAMWLGLDLEARPEWKQ
                     NRGRVRGREELVALIEARTQASTVDEVLAMCEANAIPASRVRSVDEVLFRKGGELHNL
                     LQPLFEADTNAVVPTLAAPILLNGERACAPLPPPRWNP"
     gene            complement(1222..>2021)
                     /locus_tag="VK150_01440"
     CDS             complement(1222..>2021)
                     /locus_tag="VK150_01440"
                     /inference="COORDINATES: protein motif:HMM:NF025714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4403 family protein"
                     /protein_id="HLP29991.1"
                     /translation="LARLVRESALARQKAQEAWLQFSQPIELRPDLYLLFQPRRVRLA
                     PLATQGRTLVLTPEIEIQPRLVLGAKPEATPAPLPDLELNASPKPGFHLRVEADLSYA
                     HASRQLAAEVVGRTFDTDKGRFEITSAQVRGDRGKAILDIGLKGRITGKVSLSGRPLS
                     DPATSSLRLSELDFTLDSQSWLARMGDWLYHSDLQKLLTEKAHFLMDQQFQGLREQVQ
                     ASLNRPLAPNLQLSGTLTSFRVAAVTTGPDGFKSQAYLDGEVRVDMK"
BASE COUNT          274 a          676 c          756 g          315 t
ORIGIN      
        1 caggcctggc gcagccgcgc ctccgccttc tggttgggca ggcgggcccc gatggggacc
       61 aggcgcgggg tccgcttcat gggttccagc gcggtggcgg cagcggggcg caggcccgct
      121 cgccgttgag gaggatgggg gcggccaggg tgggcaccac ggcgttggtg tcggcctcga
      181 agaggggctg caggaggttg tgcagctcgc cgcccttgcg gaagagcacc tcgtccacgc
      241 tgcgcacgcg gctggcggga atggcgttgg cctcgcacat cgccaggacc tcgtccacgg
      301 tgctggcctg ggtgcgggcc tcgatgaggg ccaccagctc ctcgcggccc cgcacgcgtc
      361 cgcggttctg cttccactcg gggcgggcct ccaggtccag tccgagccac atggccagca
      421 cctcgaactg gcggtcgctg cccacgccga tggccacgtc gccgtcgctg cagcggaacg
      481 actggtaggg gacgatctgg ggatgggcgt tgccccaccg cttgggcgga gtgccggtca
      541 tgagcgcgcc ggcggccacg ttcacgaggc ccgccagggc cgcttccatg aggggcactt
      601 cgatgtggag ggcctccccc gtgcgttcgc ggtgcaggag ggccgcctgg atgccgttgg
      661 cgcagtagag cccggtcagc acgtccacca gggccacgcc caccttcatg ggccgaccct
      721 cgggctcgcc ggtgatggcc atccagccgc tctcggcctg gatgatgaag tcgtacccgg
      781 cccgtcgcga ggcggtcacg tccgacgcga agcctcgcac ggaggccacg atgagcttcg
      841 ggaatttcgc gtggagccgt ttccagccca ggcccaggcg atccgtggag tccgcccgga
      901 agttctccac cagcacgtcc gcgtccttca gcaggtcgaa caggaccgcc ttcccctcct
      961 cggtgtgcag gtccacggcc tggctcttct tgccccggtt ggcgcagcgg aagtaggcgc
     1021 tctcgccatg gtcgccgtcc tcgaagggtg ggccccagcc gcgggtggga tccccttccg
     1081 gcggctcgag cttctgcacc tcggcgccga ggtccgccag cagctgcgtg gcgaaggggc
     1141 ccgcgagcac gcaggacagg tccacgatcc tgtagtggga caggggcttg ggcatcggga
     1201 acgaagtctc caggaatcag cctacttcat gtccacccgc acctcgccgt cgaggtaggc
     1261 ctgagacttg aagccgtccg gccccgtggt gacggccgcg acgcggaaag aggtgagggt
     1321 gccgctgagc tggaggttcg gggccagggg ccggttcagg ctggcctgca cctgctcccg
     1381 cagtccctgg aactgctggt ccatgaggaa gtgggccttc tcggtgagca gcttctgcag
     1441 atccgagtgg tagagccagt cgcccatgcg tgccagccag ctctggctgt ccagagtgaa
     1501 gtccagctcc gagaggcgca gggagctggt ggcgggatcc gacaggggcc tgcccgagag
     1561 cgagaccttg ccggtgatgc gtcccttcag gccgatgtcg aggatggcct tgccccggtc
     1621 gccccgcacc tgggcggagg tgatctcgaa gcgccccttg tcggtgtcga aggtgcggcc
     1681 caccacctcg gccgccagct gacggctggc gtgggcgtag gagagatccg cctccacccg
     1741 caggtggaag ccgggcttgg ggctggcgtt caattccagg tcgggcagcg gggcgggcgt
     1801 ggcttcgggc ttggcgccga gcaccaggcg gggctggatc tcgatttccg gcgtgaggac
     1861 gagcgtgcgc ccctgggtgg ccagcggcgc caggcgcacc cggcggggct ggaagagcag
     1921 gtagaggtcc ggccgcagct cgatgggctg gctgaactgc agccaggcct cctgggcctt
     1981 ctggcgggcc agggcgctct cccgcaccag ccgggccagg a
//
LOCUS       DATGWW010000101         3644 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_279266, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000101 DATGWW010000000
VERSION     DATGWW010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3644
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279266"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1505
                     /locus_tag="VK150_01445"
     CDS             <1..1505
                     /locus_tag="VK150_01445"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: protein motif:HMM:NF006690.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HLP29992.1"
                     /translation="LGLPTSTLFRLPQNPADSGKGYSLAQKMVGKACGVVGIRPGTYC
                     EPKMTTVGSQDTTGPMTRDELKDLACLQFSADMVMQSFCHTAPYPKPVDVKTHRELPP
                     FITNRGGVSLKPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAA
                     TGVMPLDMPESVLVRFKGDLQPGVTLRDLVNAIPYYAIQQGLLTVEKKGKKNIFSGRI
                     LEIEGLPKLKVEQAFELSDASAERSAAGCTVRLDKEPIIEYMTSNITLMKWMIANGYE
                     HLETLENRIRAMQAWIAKPELLAPDADADYAAVIEINLADVKEPLLACPNDPDDIKPL
                     SAVAGDAIDEVFIGSCMTNIGHFRAAGKLLDGKSDIPTRLWIAPPTKMDEYVLTQEGY
                     YGILGRTGARLEMPGCSLCMGNQAQIRKGSTAMSTSTRNFPNRLGLDTRVYLGSAELA
                     AVCALLGKIPTVAEYMAQIGVVDAKAKDIYRYMNFDQIADFREIADTVQV"
     gene            1640..2122
                     /gene="ribH"
                     /locus_tag="VK150_01450"
     CDS             1640..2122
                     /gene="ribH"
                     /locus_tag="VK150_01450"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: protein motif:HMM:NF013081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HLP29993.1"
                     /translation="MGIFEGHIRVHGGDRFALVASRWNDFIVERLIEGAKDCILRHGG
                     KEDQLDLIRVPGSFELPQAAKFAAQSGRYAGVIVLGSVIRGGTPHFDMIAAEVTKGAA
                     QVALDTGLPLAFGVLTTDSVEQAIDRAGAKMGNKGWEAAQSVLEMVDLAHTLGGKKGK
                     "
     gene            2123..2590
                     /gene="nusB"
                     /locus_tag="VK150_01455"
     CDS             2123..2590
                     /gene="nusB"
                     /locus_tag="VK150_01455"
                     /inference="COORDINATES: protein motif:HMM:TIGR01951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HLP29994.1"
                     /translation="MGVRRRGREYALQMLYAMDLTGYQPDQVFAGFYAIQDLNRDAFY
                     YARRLVDGVHGHLDDIDEALTKYAEHWKIHRMAAVDRNLLRLGLYELMFVREVPFPIV
                     INEALEIVKEFSDQEGTQFLNGILDAARKEFRPEETGPRLRKKAPAAEPAEDS"
     gene            2678..3289
                     /gene="accB"
                     /locus_tag="VK150_01460"
     CDS             2678..3289
                     /gene="accB"
                     /locus_tag="VK150_01460"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HLP29995.1"
                     /translation="MSTSRKKPAAPKKSPAPRPAKTAAPEPKAAAAAKQVAKTPAKAA
                     VQAIGLEEIKALIALVGREPFQEFEFEAGDMRFRIRKDGPAPAIHAPSAAPMMVAASA
                     APMVHHLPSVPAAPAAPVDEPGIHYVTSPIVGTFYRASNPTATPYVSPGDYVKPGQTL
                     CIIEAMKLMNEIECDVAGEVVKVLVENGTPVEYGERLFAVRIG"
     gene            3292..>3644
                     /locus_tag="VK150_01465"
     CDS             3292..>3644
                     /locus_tag="VK150_01465"
                     /inference="COORDINATES: protein motif:HMM:NF012510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HLP29996.1"
                     /translation="MGAAIKRKASAATTAPIDAPPFKKVLIANRGEIALRVILACKEM
                     GIQTVAVYSEADRNALHVRFADEEVCIGPPPSSKSYLNIPQVIAAAEVTGAEAIHPGY
                     GFLSENAHFVEVCQA"
BASE COUNT          666 a         1335 c         1089 g          554 t
ORIGIN      
        1 ttctcggcct gccgaccagc acgctgttcc gcctgccgca gaacccggcc gactccggca
       61 agggctactc gctcgcccag aagatggtcg gcaaagcctg cggcgtcgtc ggcatccgcc
      121 ccggcaccta ctgcgagccc aagatgacga ccgtcggctc ccaggacacc accggcccga
      181 tgacccgcga cgagctgaag gacctggcct gcctgcagtt ctccgccgac atggtgatgc
      241 agtccttctg ccacacggcg ccctatccca agcccgtgga cgtgaagacc caccgcgagc
      301 tgcccccctt catcaccaac cgcggcggcg tctcgctgaa gcccggcgac ggcgtcatcc
      361 acagctggct gaaccggctg ctcctgcccg acaccgtggg caccggcggc gactcccaca
      421 cccgcttccc catcggcatc tccttcccgg ccggctccgg cctggtggcc ttcgccgccg
      481 ccacgggcgt catgcccctc gacatgcccg aatccgtgct agtgcgcttc aagggcgacc
      541 tccagcccgg cgtcaccctg cgcgacctgg tgaacgccat cccctactac gccatccagc
      601 agggcctgct caccgtcgag aagaagggca agaagaacat cttcagcggc cgcatcctcg
      661 agatcgaggg cctgccgaag ctgaaggtgg agcaggcctt cgagctctcc gacgcctccg
      721 ccgaacggtc cgccgcgggc tgcaccgtgc gcttggacaa ggaaccgatc atcgagtaca
      781 tgacgtccaa catcacgctc atgaagtgga tgatcgccaa cggctacgag cacctggaaa
      841 ccctggagaa ccgcatccgg gccatgcagg cctggatcgc caagcccgag ctgctggctc
      901 ccgatgccga tgcggactac gccgccgtca tcgagatcaa cctggcggac gtgaaggaac
      961 ccctgctggc ctgccccaac gatcccgacg acatcaagcc cctgtcggcg gtggccgggg
     1021 acgccatcga cgaggtcttc atcggctcct gcatgaccaa catcggccac ttccgcgccg
     1081 ccgggaagct cctggacggg aagagcgaca tccccacccg gctctggatc gcgcctccca
     1141 ccaagatgga cgagtacgtc ctcacccagg agggctacta cggcatcctc ggccgcaccg
     1201 gcgcgcgcct ggagatgccc ggatgctcgc tgtgcatggg caaccaggcg cagatccgca
     1261 agggctccac ggccatgtcc acctcgacgc gcaacttccc caaccgcctg ggcctcgaca
     1321 cccgcgtcta cctgggctcg gcggagctcg ccgccgtctg cgccctgctc gggaagattc
     1381 ccaccgtggc ggaatacatg gcccagatcg gggtggtgga cgccaaggcg aaggacatct
     1441 accgctacat gaacttcgac cagatcgcgg atttccgcga gatcgccgac accgtccagg
     1501 tctagcgaat gcgccgcaga tgaacccgga tgaacactga tgcgccggaa tcaatccgcg
     1561 ttcatctgtg ttcatccgtg gcaatacata tcttttgtga tagtctcatc agttcttaac
     1621 cacctttcgg ggggttccca tggggatctt tgagggccac atccgcgtgc acgggggcga
     1681 ccgcttcgcc ctggtggcct cgcgctggaa cgacttcatc gtcgaacgcc tcatcgaggg
     1741 cgcgaaggac tgcatcctcc gccacggcgg gaaggaagac cagctggacc tcatccgcgt
     1801 cccgggcagc ttcgagctgc cccaggcggc caagttcgcc gcccagagcg gccggtacgc
     1861 cggcgtcatc gtgctcggct ccgtgatccg cggcggcacg ccccatttcg acatgatcgc
     1921 cgccgaagtc accaagggcg ccgcccaggt ggccctggac accggcctgc ccctggcctt
     1981 cggcgtcctg accaccgaca gcgtggagca ggccatcgac cgcgccggcg ccaagatggg
     2041 caacaagggc tgggaggccg cccagagcgt cctcgaaatg gtggacctgg cccacaccct
     2101 cggcgggaag aagggaaaat agatgggagt tcgtcgtcgg gggcgcgagt atgccctcca
     2161 gatgctgtac gccatggacc tgacgggcta ccagcccgat caggtgtttg ccggcttcta
     2221 tgcgatccag gacctcaacc gggacgcctt ctactacgcc cgccgcctgg tggacggggt
     2281 gcacggccac ctggacgaca tcgacgaagc gctgaccaag tatgccgagc actggaagat
     2341 ccaccgcatg gccgcggtgg accgcaacct gctgcgcctg ggcctctacg agctgatgtt
     2401 cgtgcgggaa gtgcccttcc ccatcgtgat caacgaggcc ctggagatcg tgaaggaatt
     2461 cagcgaccag gaaggcacac aattcctgaa tggcattctg gatgccgcgc gcaaagagtt
     2521 tcgaccggaa gaaaccggcc cacgcctgag aaagaaggcc cctgctgcgg agcctgcgga
     2581 agattcgtga ccgaacctgg acccgctggt ttgctatgct cgttcccttc cccagcctga
     2641 ccggattgcc agcctgacct gaccgttgga gcacttgatg agcacctcgc gcaagaagcc
     2701 cgctgccccg aagaaatctc ccgctccccg tcccgccaag accgccgccc ctgagcccaa
     2761 agccgccgcc gcggccaagc aggtcgccaa gaccccggcc aaggcggccg tccaggccat
     2821 cggcctcgag gagatcaagg ccctcatcgc cctggtgggc cgcgaaccct tccaggaatt
     2881 cgagttcgag gccggcgaca tgcgcttccg catccgcaag gacggcccgg cccccgccat
     2941 ccacgccccg tcggccgccc cgatgatggt ggccgcctcg gccgcgccca tggtccacca
     3001 cttgcccagc gttccggcag cgccagcggc gccggtggac gaacccggca tccactacgt
     3061 caccagcccc atcgtcggca ccttctaccg ggcctccaac cccacggcca ccccctacgt
     3121 gtcgcccggc gactacgtga agccgggcca gaccctctgc atcatcgagg ccatgaagct
     3181 catgaacgag atcgagtgcg acgtggccgg cgaagtcgtg aaggtgctcg tggagaacgg
     3241 cacccccgtc gaatacggcg agcggctctt cgcggtccgg atcggctagc catgggcgct
     3301 gccatcaaac gcaaggcatc ggccgccacc acggctccca tcgacgcgcc gcccttcaag
     3361 aaggtgctca tcgcgaaccg cggcgagatc gcgctccgcg tgatcctcgc ttgcaaagag
     3421 atgggcatcc agaccgtggc ggtctattcc gaggccgacc gcaacgccct gcacgtgcgg
     3481 ttcgccgatg aggaagtctg catcggcccg ccgccctcct cgaagtccta cctgaacatc
     3541 ccgcaggtga tcgccgccgc ggaggtgacc ggcgccgagg ccatccatcc cggctacggc
     3601 ttcctcagcg aaaacgcgca cttcgtggaa gtctgccagg cctg
//
LOCUS       DATGWW010000102         1947 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_53374, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000102 DATGWW010000000
VERSION     DATGWW010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53374"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..377
                     /locus_tag="VK150_01470"
     CDS             <1..377
                     /locus_tag="VK150_01470"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HLP29997.1"
                     /translation="GSVLERPLARPPSLHFEAAVTRPLSVVFRRGEVWEGHDYTVEVV
                     TTREGLDAFDVVVDFRDLEAALDRHLAPLQGKLLSDLGLAGPLALAQRLLTDLAPFVP
                     APARLKEVALTDGQGRRMAVGA"
     gene            374..805
                     /gene="lepB"
                     /locus_tag="VK150_01475"
     CDS             374..805
                     /gene="lepB"
                     /locus_tag="VK150_01475"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:NF021981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HLP29998.1"
                     /translation="MKAWIPLAALALALSPLTVVHPARVAGQSMEPALASGDLRWVIR
                     AWASHPPRRGEVWLVEGPTGSSVKRILGLPGDQVRWRGPDLWINGVRMDEPWVVHPDR
                     TGEGAWACGAGYLVLGDNRPASLDGRAWGPLPPGALRGRVL"
     gene            846..>1947
                     /gene="murA"
                     /locus_tag="VK150_01480"
     CDS             846..>1947
                     /gene="murA"
                     /locus_tag="VK150_01480"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HLP29999.1"
                     /translation="MDRLVIQGGHPLRGRIRVSGAKNAALPCLAAALLTDETVVLSNL
                     PAVADIRTMVKVLQALGTEAALEAHPDGFELTATLACKGSEDPKAPYDLVKTMRASIL
                     VLGPLLARFGRATVSLPGGCAIGARPVNLHLEALERMGAQIEISHGYIHATVKGRLKA
                     IDHAFEKVSVGATENILMAAALAEGTTVLRNAALEPEIGDLARLLVAMGAQIEGIGTG
                     TLTITGVARLRGCEHAVIADRIEAGTYLCAVAAACGDVVLDRCEPEHLRSLLDLLERS
                     GCVITEREGQDGRQLRIQREPGQKLRSKDVTTLPFPGFPTDLQAQVMAVMTQACGISV
                     INEGIFENRFQHAMELERLGANLRTDGHTAIVA"
BASE COUNT          263 a          736 c          679 g          269 t
ORIGIN      
        1 tggggtcagt cctggagcgc cccttggcac gtcccccctc cctccacttc gaagccgccg
       61 tcacccgccc cctgtcggtg gtattccgcc ggggcgaggt gtgggaaggc cacgactaca
      121 ccgtggaggt ggtgaccacc cgcgagggcc tggatgcctt cgacgtggtg gtggacttcc
      181 gcgacctgga ggcggccctg gaccgccatc tcgcgccgct gcaggggaag ctcctgtcgg
      241 acctgggact ggcgggcccc ctggccctcg cccagcgcct gctcaccgac ctcgcgccct
      301 tcgtccccgc cccggcccgc ctcaaggaag tggccctcac cgacggccag gggcggcgga
      361 tggcggtggg ggcgtgaagg cctggatccc cctcgccgcc ctggccctcg ccctctcgcc
      421 cctgaccgtg gtgcaccccg cgcgggtcgc cggccagagc atggagcccg ccctggccag
      481 cggcgacctc cgctgggtga tccgcgcctg ggccagccac ccgccccggc ggggcgaggt
      541 ctggctggtg gagggcccca ccgggtcctc cgtgaagcgg atcctggggc tgccgggcga
      601 ccaggtgcgc tggcgcggcc cggacctgtg gatcaacggc gtccggatgg acgaaccctg
      661 ggtcgtccac ccggatcgga ccggcgaggg cgcgtgggcc tgcggcgccg gctacctcgt
      721 gctgggcgac aaccggcccg ccagcctgga tggccgcgcc tggggccccc tgccccccgg
      781 cgccctgcgc ggacgggtcc tctaagccgt cgacggttgg gctacgctgg aggattggag
      841 ctgcgatgga ccgactggtg atccaaggtg gacatcccct gcgggggcgc atccgggtgt
      901 cgggtgccaa gaacgcggcg ctgccctgcc tggccgcggc gctgctgacg gacgagacgg
      961 tcgtgctctc caacctcccg gccgtggccg acatccgcac catggtgaag gtgctgcagg
     1021 ccctcggcac cgaggcggcg ctggaagccc atcccgacgg cttcgagctc accgccaccc
     1081 tggcctgcaa gggcagcgag gatcccaaag cgccctacga cctcgtgaag accatgcgcg
     1141 cctccatcct ggtgctgggt ccccttctcg cccgcttcgg ccgggccacg gtgagcctgc
     1201 ccggcggctg cgccatcggg gcgcgccccg tgaacctcca cctggaggcc ctggagcgca
     1261 tgggcgccca gatcgagatc agccacggct acatccacgc caccgtgaag ggccggctca
     1321 aggccatcga ccatgccttc gagaaggtga gcgtcggcgc gacggagaac atcctcatgg
     1381 ccgcggccct ggccgaaggc accacggtgc tgcgcaacgc ggccctcgag cccgagatcg
     1441 gcgacctggc ccgcctcctg gtggcgatgg gcgcccagat cgagggcatc ggcaccggca
     1501 cgctcaccat caccggggtg gcgcgtctcc gcggctgcga gcacgccgtc atcgctgacc
     1561 gcatcgaggc cggcacctac ctctgtgccg tggcggcagc ctgcggcgac gtggtgctgg
     1621 accgctgcga accggagcac ctgcgctccc tgctggacct gctcgagcgc tcgggctgcg
     1681 tcatcacgga gcgcgaaggc caggacggcc gccagctgcg catccagcgc gagcctggcc
     1741 agaagctgcg ctcgaaggac gtgaccaccc tgcccttccc cgggttcccc accgacctgc
     1801 aggcccaggt gatggccgtg atgacccagg cctgcggcat cagcgtcatc aatgaaggca
     1861 tcttcgagaa ccgcttccag cacgccatgg agctggagcg cctcggcgcg aacctgcgca
     1921 cggacggcca cacggccatc gttgctg
//
LOCUS       DATGWW010000103         6702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_366228, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000103 DATGWW010000000
VERSION     DATGWW010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6702
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366228"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1339
                     /locus_tag="VK150_01485"
     CDS             <1..1339
                     /locus_tag="VK150_01485"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HLP30000.1"
                     /translation="IFGNFFLPILIGAKDVSFPRLNLASWYFFIAGAILAVLSLFTGG
                     GAPDTGWTFYAPFSLKTGTNVSLAVFAAFVLGFSSMLTGINFITTIHRLRAPGMKWFR
                     MPLMCWALYSTAWIQLLATPIVAITLVLVILERFFGIGIFDPAKGGDPLLYQHLFWIY
                     SHPAVYIMILPAMGAISEILPTFTKRPIFGYKAIAFSSMSIAAVGSLVWAHHMFTSGM
                     SATANMVFSLLTMVVAVPSAIKVFNWVSTLYKGSIDFQPPLLFTLTFIFLFCIGGLTG
                     VMQGALALNIHIHDTYFIVGHFHYVMFGGTGMALFAALLYWFPKMWGKMYSKKAIYAS
                     WFPMFIGFNMLYFGMMILGMMGMPRRYYVHLPQFHTMHVVATVGSWLLILGLIMFFGT
                     LLYAIFKGEKAEDNPWGGVTLEWTIPSPPPLENFEEIPTVTHGPYHFEQQEAK"
     gene            1336..1938
                     /locus_tag="VK150_01490"
     CDS             1336..1938
                     /locus_tag="VK150_01490"
                     /inference="COORDINATES: protein motif:HMM:NF012720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3 family protein"
                     /protein_id="HLP30001.1"
                     /translation="MTGHVHRDDFGSRLGMWLFLVTEMVLFGGLFIGYSYMRYRYPAE
                     FHHGGAELNATLGIINTLVLLTSSLTVVLAIVAVQRAEKKRAMAFLGTTLVLGVVFLV
                     IKSFEWGAKFHHGLYPNSAHLATLPPGEQVFFGLYFTMTGLHGLHVIAGLSVLGVMLW
                     WVATDRIRADRYIHLENGGLYWHLVDVIWIFLLPLFYLAA"
     gene            2030..2353
                     /locus_tag="VK150_01495"
     CDS             2030..2353
                     /locus_tag="VK150_01495"
                     /inference="COORDINATES: protein motif:HMM:TIGR02229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HLP30002.1"
                     /translation="MTEHTAHTADHGADHGEAHADHPGYGTFIKVWVALLILTGCLVG
                     VSHLGQTAAVWGLLTLTPLKAALVFYYFMHLKYEGPLFKIVVLVTLGTLLIFFALLFS
                     DVAFR"
     gene            2371..3315
                     /gene="coxB"
                     /locus_tag="VK150_01500"
     CDS             2371..3315
                     /gene="coxB"
                     /locus_tag="VK150_01500"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HLP30003.1"
                     /translation="MNQAAISAQKSDAVFFYVFGLSVAFLIFITVLMIYFVVRYSKKR
                     HPKAEQIEGHVGLEIVWTTVPLVLFLSIFYYGWTNYEYMRQAPRDAMAIKVTARQWSW
                     SFEYPNGKQSKVLFAPIGKPMKVEVRSADVVHGFFVPSFRLKIDAVPARANTTWFQAT
                     KLGSYDIQCTVICGVDHSLMLSKVIVVPEDEFKAWYFGGEDAPEPGKALRAAEAHPDL
                     KDLPPGLAVLTAKGCLACHSVDGKPKVGPTLKALYGREQQILIAGDYKTITVDDAYLC
                     RSITNPMDQVVRGYPPAMPQTALSEQELNEVVRYIKGL"
     gene            3491..4378
                     /locus_tag="VK150_01505"
     CDS             3491..4378
                     /locus_tag="VK150_01505"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HLP30004.1"
                     /translation="MAALPAPKAHPVSTFLELTKLRISGASTFTAAAGYVAFLRGADM
                     GLVTTLLGILLLAMGSSALNEVQEHRYDALMPRTAGRPIPHGDISPARAAVVAIVLAV
                     TGFLILLLAHNLTSALLGALALGWYNGFYTPLKRVSAFAVVPGSLIGALPPAIGWAAA
                     GGSAADPSVLALAFVFFIWQVPHFWLLVGLHAEGYEEAGYPTLVGLFGRPRLSRLTFT
                     WTCGTAAACGLLPIFRVLVSRPAEIMLGLGALWLILGSLPLLRPGQDAPLYRRVFMNI
                     NLFALVLTAAVILDPFFAR"
     regulatory      4500..4585
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01057"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="S-adenosyl-L-homocysteine riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="S-adenosyl-L-homocysteine"
                     /db_xref="RFAM:RF01057"
     gene            4606..5532
                     /locus_tag="VK150_01510"
     CDS             4606..5532
                     /locus_tag="VK150_01510"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HLP30005.1"
                     /translation="MNGQHMSLLAVGSVAFDDLVTPFGSRENILGGSASYFSLSASHF
                     RPVEVVAVVGEDFGPEHFQVFEGRPINLEGLVQVPGKSFRWKGSYGRELAEAQTLETH
                     LNVFAGFRPVLPERSRTAPYLFLGNIDPVLQLAVVRQMSRRPRWIALDTMNFWIEGSR
                     PALLDVLKEVDILLVNETEARSLSGQHNLLKAYQRIRELGPRVLVVKRGEHGVSLFAP
                     EGCFMASAFPLEEVHDPTGAGDTFAGGFLGYLAAAESLDLQSLKKATLMGTVMASFTV
                     ESFGTTRLQATTPDHIQERMRLFSDMLFVTGN"
     gene            5557..6696
                     /gene="metK"
                     /locus_tag="VK150_01515"
     CDS             5557..6696
                     /gene="metK"
                     /locus_tag="VK150_01515"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR01034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HLP30006.1"
                     /translation="MKTGFNLFTSESVTEGHPDKMADQISDAVLDAALKDDPRSRVAC
                     ETLLTTGLVLVAGEITTETYIPVASLVRSVVQDIGYDHHIKGFDYNTCAVMVTIDQQS
                     PDIAMGVDTGGAGDQGLMFGYACSDTPELMPAPIHFSHLLTRKLSEVRKSGQLPWLRP
                     DGKSQVTVEFDGDKVKRIHTVVISTQHDEHVTQNTIRDSILKDVIQAALPGDLLDAQT
                     IYHVNPTGRFVVGGPMGDTGLTGRKIIVDTYGGSGHHGGGAFSGKDPSKVDRSAAYMG
                     RYIAKNIVAAGLASRCEIQLAYAIGVAEPVSIAVDTFGTGQVSDEAIVKAVREVFSCT
                     PKAMIEALDLRKPIYRATAAYGHFGRPEFSWEKTDKVDALRKAAK"
BASE COUNT         1073 a         2435 c         1968 g         1226 t
ORIGIN      
        1 catcttcggg aacttcttcc tgcccatcct gatcggggcc aaggacgtgt ccttcccgag
       61 gctgaacctg gcgtcctggt acttcttcat cgccggtgcc atcctcgccg tcctgtcgct
      121 cttcaccggc ggcggcgccc ccgacaccgg ctggaccttc tacgccccct tcagcctgaa
      181 gaccggcacc aacgtgagcc tcgcggtctt cgcggccttc gtgctgggct tctcctcgat
      241 gctgaccggc atcaatttca tcaccacgat ccaccgcctg cgggcgccgg gcatgaagtg
      301 gttccgcatg cccctgatgt gctgggccct ctactccacg gcttggatcc agctgctggc
      361 cacccccatc gtggccatca ccctggtgct ggtgatcctg gagcgcttct tcggcatcgg
      421 catcttcgat ccggccaagg gcggcgatcc cctgctctac cagcacctct tctggatcta
      481 ctcccacccg gcggtctaca tcatgatcct gccggccatg ggcgccatct cggagatcct
      541 gcccaccttc accaagcggc ccatcttcgg ctacaaggcc atcgccttca gctccatgtc
      601 catcgccgcg gtgggcagcc tggtctgggc ccaccacatg ttcacctcgg gcatgagcgc
      661 caccgccaac atggtgttct ccctgctgac catggtcgtg gccgtgccca gcgccatcaa
      721 ggtcttcaac tgggtgagca ccctctacaa gggcagcatc gacttccagc cgcccctgct
      781 cttcacgctg accttcatct tcctcttctg catcggcggc ctcaccggcg tgatgcaggg
      841 cgccctggcc ctgaacatcc acatccacga cacctacttc atcgtgggtc acttccatta
      901 cgtgatgttt ggcggcaccg gcatggccct cttcgcggcc ctgctctact ggttccccaa
      961 gatgtggggg aagatgtact ccaagaaggc catctacgcc tcctggttcc ccatgttcat
     1021 cggcttcaac atgctctact tcggcatgat gatcctcggc atgatgggca tgccccgccg
     1081 ctactacgtg cacctgcccc agttccacac catgcacgtg gtggccaccg tgggcagctg
     1141 gctgctgatc ctcggcctga tcatgttctt cggcaccctg ctctacgcga tcttcaaggg
     1201 tgagaaggcc gaggacaatc cctggggcgg tgtcacgctc gaatggacca tccccagccc
     1261 gcccccgctg gagaacttcg aggagatccc caccgtcacc cacggcccct accacttcga
     1321 gcagcaggag gcgaaatgac tgggcacgtt caccgcgacg acttcgggtc gcgcctgggc
     1381 atgtggctgt tcctcgtcac cgagatggtc ctcttcggcg gtctcttcat cggctactcc
     1441 tacatgcgct accgctaccc cgccgagttc caccacggcg gcgccgagct gaacgcgacg
     1501 ctgggcatca tcaacaccct ggtgctgctc accagcagcc tcacggtggt gctcgccatc
     1561 gtggccgtcc agcgggccga gaagaaacgg gccatggcct tcctgggcac caccctggtg
     1621 ctcggcgtgg tcttcctcgt catcaagtcc ttcgaatggg gcgccaagtt ccaccacggg
     1681 ctctacccga actccgcgca cctcgccacg ctgcctccgg gggaacaggt cttcttcggc
     1741 ctctacttca cgatgaccgg tctccacgga ttgcatgtca tcgccgggct gtcggtgctg
     1801 ggcgtcatgc tctggtgggt ggccacggac cgcatccggg ccgaccgcta catccacctg
     1861 gagaacggcg gcctctattg gcacctcgtg gacgtgatct ggattttcct tctcccgctg
     1921 ttctacctgg ccgcctgatg cttcccgggg gttccgcgct gcgcgcacac ccccggaacc
     1981 ccacctcgct tccagccaag ctggatgctc ggtccgagga acccaaccca tgactgaaca
     2041 caccgcacat accgccgacc acggcgccga ccatggcgag gcccacgccg atcacccggg
     2101 ctacggcacc ttcatcaagg tctgggtcgc tctgctgatc ctcaccggct gcctggtggg
     2161 cgtcagccac ctgggccaga ctgccgcggt gtggggcctg ctgacgctga ctcccctcaa
     2221 ggccgccctg gtcttctact acttcatgca cctcaaatac gaggggccgc tcttcaagat
     2281 cgtggtgctc gtgaccctgg gcaccctgct gatcttcttc gccctgctct tctccgacgt
     2341 cgctttccgc tgaggcttcc catggattgg atgaaccaag ccgccatttc ggcccagaaa
     2401 tccgacgcgg tcttcttcta cgtgttcggg ctctccgtcg cgttcctgat cttcatcacg
     2461 gtgctgatga tctacttcgt ggtgcgctac agcaagaagc gccacccgaa ggccgagcag
     2521 atcgaaggcc acgtgggcct cgagattgtc tggaccacgg tgcccctcgt gctgttcctg
     2581 tccatcttct actacggctg gaccaactac gagtacatgc gccaggcgcc ccgcgatgcc
     2641 atggccatca aggtcaccgc ccgccagtgg agctggtcgt tcgaataccc caacggcaag
     2701 cagagcaagg tcctcttcgc ccccatcggc aagcccatga aggtcgaggt ccgcagcgcg
     2761 gacgtggtgc acggcttctt tgtgccctct ttccgcctca agatcgacgc cgtgcccgcc
     2821 cgcgccaaca ccacctggtt ccaggccacc aagctggggt cgtacgacat ccagtgcacc
     2881 gtgatctgcg gagtggacca cagcctcatg ctgagcaagg tcatcgtcgt gcccgaggat
     2941 gagttcaaag cctggtactt cggcggcgag gatgcgccgg aacccgggaa ggccctccgg
     3001 gccgcagagg cccaccctga cctgaaggac ctgccgccgg gcctggccgt gctgaccgcg
     3061 aagggctgcc tcgcctgcca ctcggtggac ggcaagccca aggtcggccc caccctcaag
     3121 gccctctacg gccgcgagca gcagatcctc atcgccgggg actacaagac catcacggtg
     3181 gatgacgcct acctgtgccg gtccatcacc aaccccatgg accaggtggt gcgcgggtat
     3241 ccgcccgcca tgccccagac cgcgctcagc gagcaggagc tgaacgaggt cgtccgctac
     3301 atcaaagggc tatgattttc cgggggcccg ggctgcgtcc tacacccccg cacccccgcg
     3361 ccctcgccca gccaagctgg gcttcggctt gaacatgacc tccccgggga actggacctt
     3421 cgccctgcac ccccgatatc cccgcccagc caagctgggc tccggctaga actggagcga
     3481 tgatttgagc gtggccgccc ttcccgcccc gaaagcccac ccggtctcga ccttcctgga
     3541 gctgaccaag ctccggatct cgggcgcctc caccttcacc gcggcggcgg gctatgtggc
     3601 cttcctccgc ggcgcggaca tgggcctggt cacgaccctg ctcggcatcc tcctcctggc
     3661 catgggcagc agcgccctga acgaagtgca ggagcaccgc tacgacgcct tgatgccccg
     3721 caccgcgggc cggccgatcc cccacggcga catctctccc gcccgggctg cagtcgtagc
     3781 catcgtcctc gccgtgaccg gattcctgat tctgctgctg gcccacaacc tgacctcggc
     3841 cctgctcgga gccctggctc tgggctggta caacggcttc tacacccccc tgaagcgcgt
     3901 cagcgccttc gcggtggtgc ccggctccct catcggggcg ctcccccccg ccatcggctg
     3961 ggccgccgcc ggcggcagtg ccgccgaccc ctccgtgctc gccctcgcct tcgtgttctt
     4021 catctggcag gtgccgcatt tctggctgct ggtgggcctc cacgccgaag gctacgagga
     4081 ggcgggctat cccaccctgg tggggctctt cggccggccc cgcctctccc gcctcacctt
     4141 cacctggacc tgcggcaccg ccgctgcctg cggccttctg ccgatcttcc gcgtgctggt
     4201 ctcgcgcccc gccgagatca tgctgggcct cggcgccctg tggctcatcc tcggctccct
     4261 gcccctcctg aggcccggcc aggacgcccc cctctaccgc cgcgtcttca tgaacatcaa
     4321 cctcttcgcc ctggtgctca ccgccgccgt gatcctggac cccttcttcg cgcggtaggg
     4381 ctccggatct ccgcaggacc cgcctgtgca accccgcctt ttccatggcc ataggctcac
     4441 gctgtgcgcg tgtgaaccgc gcatggggct gcctggccca tccgtctgct agaatctccg
     4501 ggtccgagga gcgttgcgag gcacaccgtc gccccaggct tggatccggc cctgtgtccg
     4561 ggagtttcaa cggcgctcac tccacaaacc agatgggttt gaagggtgaa cggacagcac
     4621 atgagtctac ttgccgtcgg aagcgtcgca ttcgatgacc tcgtcacgcc gtttggcagc
     4681 cgggagaaca tcctgggcgg ctcggccagc tacttttccc tgagcgccag ccattttcgt
     4741 cctgttgagg tggtggcggt ggtgggcgag gacttcggac ccgagcattt ccaggtgttc
     4801 gaggggcgcc ccatcaacct ggagggactg gtccaggtgc cggggaagag cttccgctgg
     4861 aaggggagct atggccggga gctcgccgaa gcccagaccc tggaaaccca cctgaatgtc
     4921 ttcgcggggt tccgccccgt cctgccggag cgcagccgca cggcacccta cctgttcctg
     4981 gggaacatcg acccggtgct tcaactcgcg gtggtgaggc agatgtcccg gcgcccacga
     5041 tggatcgccc tcgacaccat gaacttctgg atcgaaggct cccggccagc cctcctggac
     5101 gtactgaagg aggtggacat cctcctggtg aacgagaccg aggcccgcag cctcagcggc
     5161 cagcacaacc tgttgaaggc ctatcagcgg atccgggagc tcggccctcg cgtgttggtg
     5221 gtcaagcggg gcgaacatgg cgtttccctc ttcgccccag aaggctgttt catggcctcc
     5281 gccttccccc tggaggaagt ccacgatccc accggggcgg gcgatacctt cgccggcggc
     5341 ttcctgggct acctggcggc agcggagagc ctcgatctcc agagcctcaa gaaggcgacg
     5401 ctcatgggca ccgtcatggc cagcttcacg gtggaatcct tcggtaccac ccgactgcag
     5461 gccaccacgc ctgaccacat ccaggaacgc atgcgcctct tttcggacat gctcttcgtg
     5521 actggcaact aaccacgatt cttcggagca cctcctatga aaaccggctt caaccttttc
     5581 acatccgaaa gcgtcaccga gggacatccc gacaagatgg cggatcagat ctccgacgcg
     5641 gtgcttgatg cggcgctgaa ggacgatccc cgcagccggg tggcctgcga gacgctgctg
     5701 accacgggcc tggtgctggt ggcgggcgag atcaccacgg agacctacat cccggtggcc
     5761 tccctggtgc gcagcgtggt gcaggacatc ggctacgacc accacatcaa gggcttcgac
     5821 tacaacacct gcgcggtgat ggtgaccatc gaccagcaga gccccgacat cgccatgggc
     5881 gtggacaccg gcggcgccgg cgaccagggc ctgatgttcg gctacgcctg ctctgatacg
     5941 cctgagctga tgccggcgcc catccacttc agccacctgc tgacgcggaa gctctccgag
     6001 gtccgcaaga gcggccagct gccctggctg cggcccgacg gcaagtcgca ggtcaccgtg
     6061 gagttcgacg gcgacaaggt caagcgcatc cacacggtgg tgatctccac gcagcacgac
     6121 gagcacgtca cgcagaacac catccgggac agcatcctga aggacgtgat ccaggcggcg
     6181 ctgcccggcg acctgctgga cgcgcagacg atctaccacg tgaaccccac ggggcggttc
     6241 gtggtgggcg ggcccatggg cgacacgggg ctcaccggcc ggaagatcat cgtggacacc
     6301 tacggcggga gcgggcacca cggcggcggg gccttctcgg ggaaggatcc gagcaaggtg
     6361 gaccgcagcg cggcctacat gggccggtac atcgcgaaga acatcgtggc cgcgggcctg
     6421 gcgtcgcgct gcgagatcca gctggcctac gccatcggcg tggccgagcc ggtgtcgatc
     6481 gcggtggaca cctttggcac cggccaggtg tcggacgagg ccatcgtgaa ggcggtgcgc
     6541 gaagtcttca gctgcacacc caaggccatg atcgaggccc tggacctgcg caagcccatc
     6601 taccgcgcca ccgcggccta cggccacttc gggcgccccg agttcagctg ggagaagacc
     6661 gacaaggtcg acgcccttcg caaggccgcc aagtagcccc gc
//
LOCUS       DATGWW010000104         2130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_8231, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000104 DATGWW010000000
VERSION     DATGWW010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8231"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /locus_tag="VK150_01520"
     CDS             complement(<1..244)
                     /locus_tag="VK150_01520"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30007.1"
                     /translation="MPLSPNPYAALKEASQYVRLFRGKTFVVKVGGEVIAEPKIRKAL
                     CEQIALLWSFSIKVVVVHGGGAELDAVCEAMQIPVEK"
     gene            complement(281..1267)
                     /locus_tag="VK150_01525"
     CDS             complement(281..1267)
                     /locus_tag="VK150_01525"
                     /EC_number="2.1.3.9"
                     /inference="COORDINATES: protein motif:HMM:NF003384.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_function: GO:0043857 - N-acetylornithine
                     carbamoyltransferase activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylornithine carbamoyltransferase"
                     /protein_id="HLP30008.1"
                     /translation="MKHFTRISDLGPDGIKQILARAAAWKQTKPGAIFADRILGMVFF
                     NPSLRTRASFEAAMLRHGGHAIVLEVGAGTWKLEDRDGAVMNADRAEHVREGVPVLGR
                     YADLLAVRTFSGGEGDATDELDPVINAFRRFSTVPVLSMESAREHPHQGLADLLTIQE
                     AHGTTKVPVTLTWAPHIKPLPKAVPNSFLLTAAACGADIRVAHPKGYELAPEVRAEAE
                     AYAAATGGKITYTNDQDAALEGSAAVYAKAWGPSTSSGLEAAPMADLAAWMPAAAHMQ
                     KAAKEAIFTHCLPVRRNLEVHDSVLDGPWSRVVDEAENRFHVQRATIHHLLS"
     gene            complement(1264..>2130)
                     /locus_tag="VK150_01530"
     CDS             complement(1264..>2130)
                     /locus_tag="VK150_01530"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLP30009.1"
                     /translation="VFFCNSGAEANENALKLALLLTGRKQLAAFQGGWHGRTLLALSV
                     TDDPKITEPFADQLVPALRLPFGDLAALESADFSDVAGVILEPIQSMAGIKTASREWF
                     QALRAKCDATGALLIFDEIQTGMGRLGTPFAAQFYGVRPDLMTSAKGLASGVPMGALL
                     MTAAVASKLKGGDLGSTFGGGPLACAALLATVEVIQSEGLMANATAASSRLRQELVGS
                     VVTEVLGEGLLLGLRTAHAVALKKHLLARNILVGGSGDPTVLRLMPPLNVSGGALIAL
                     LTAIHAFQPEQP"
BASE COUNT          304 a          675 c          826 g          325 t
ORIGIN      
        1 ccttttccac ggggatctgc atggcctcgc acacggcgtc caactcggcg ccgccgccgt
       61 gcaccaccac caccttgatg gagaaggacc acagcagggc gatctgctcg cagagggcct
      121 tgcggatctt gggttcggcg atcacctcgc cgccgacctt gaccacgaag gtcttgccgc
      181 ggaacaggcg gacgtactgg gaggcttcct tgagggcggc atagggattg ggggagaggg
      241 gcatcggaac ctcgagcgcg aaaggacggg atgggcgggg ctaggacagc aggtggtgga
      301 tcgtggcgcg ctggacatgg aagcggttct ccgcctcgtc caccacgcgg ctccaggggc
      361 cgtcgaggac gctgtcgtgc acctcgaggt tgcggcgcac gggcaggcag tgggtgaaga
      421 tggcttcctt ggcggccttc tgcatgtgcg cggcggcggg catccaggcg gcgaggtcgg
      481 ccatgggcgc ggcttcgagg ccggagctgg tggaagggcc ccaggccttg gcgtagacgg
      541 cggcgctgcc ttccagggcg gcatcctggt cgttcgtgta ggtgatcttc ccgccggtgg
      601 cggcggcgta ggcctcggcc tcggcccgca cttccggggc cagctcgtag cccttcgggt
      661 gggccacgcg gatatctgcc ccgcaggccg cggccgtgag caggaaggag ttgggcacgg
      721 ccttcggcag gggcttgatg tggggcgccc aggtgagggt cacgggcacc ttcgtggtgc
      781 cgtgggcctc ctggatggtg agcaggtccg cgaggccctg gtgcgggtgc tcccgggcgc
      841 tctccatgct cagcacaggc acggtggaga agcgccggaa ggcgttgatg acgggatcga
      901 gctcatccgt ggcatcgccc tcgccgccgc tgaaggtccg caccgccagc aggtccgcgt
      961 agcggcccag caccggcacg ccctcgcgga catgctcggc ccggtcggcg ttcatgacgg
     1021 cgccgtcgcg gtcttccagc ttccaggtgc ccgcgccgac ttccagcacg atggcgtggc
     1081 cgccgtggcg cagcatggcc gcttcgaagc tggcccgggt ccgcaggctg gggttgaaga
     1141 agaccatgcc caggatgcgg tcggcgaaga tggcgccggg cttcgtctgc ttccaggccg
     1201 cggcgcgggc gaggatctgc ttgatgccgt ccgggcccag gtcagagatg cgggtgaagt
     1261 gcttcatggc tgctccggct ggaaggcgtg gatggcggtg aggagggcga tgagggcgcc
     1321 gccgctgacg ttgagcggcg gcatgaggcg cagcacggtg ggatcgcccg acccgcccac
     1381 gaggatgttc cgcgccagca ggtgcttctt gagcgccacg gcgtgggcgg tgcggagccc
     1441 gagcagcagg ccctcgccga gcacctcggt caccacggaa cccaccagtt cctgccgcag
     1501 gcggctggag gccgccgtcg cgttcgccat gagcccctcg gactggatga cctccaccgt
     1561 ggccagcagg gccgcgcagg ccaggggtcc gccgccgaag gtgctgccga ggtcgccccc
     1621 cttgagcttt gaggccacgg cggccgtcat gagcagggcg cccatgggca cgccggaggc
     1681 gaggcccttg gcggaggtca tgaggtcggg ccgcacgccg tagaactggg cggcgaaggg
     1741 cgtccccagg cggcccatgc cggtttggat ctcgtcgaag atcagcaggg cgccggtggc
     1801 gtcgcacttg gcgcgcaggg cctggaacca ttcgcgcgag gcggtcttga tgccggccat
     1861 gctctggatg ggctcgagga tgacgccggc cacgtcggag aaatcggcgg attcgagggc
     1921 cgccaggtcg ccgaagggca gacggagcgc gggcaccagc tggtcggcga agggctcggt
     1981 gatcttcggg tcgtcggtca cagaaagggc cagcagggtg cgtccatgcc agccgccctg
     2041 gaaggccgcc agctgcttcc ggcccgtgag gagcagggcc agcttcagcg cgttctcgtt
     2101 ggcttcggcg ccgctgttgc agaagaagac
//
LOCUS       DATGWW010000105         2885 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_366293, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000105 DATGWW010000000
VERSION     DATGWW010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2885
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366293"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1039)
                     /locus_tag="VK150_01535"
     CDS             complement(<1..1039)
                     /locus_tag="VK150_01535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30010.1"
                     /translation="MHTSHHGAPSRLRGLWAGLACLLACTLSAQAPPTWEELEARQVP
                     IAGITFRIHEIFDPNHPHENHWIGRLANLLHIETREQVVRRELLFRPGEVVNARLIHE
                     TERNLRAFRFLKDAWIVPEVDETGAVRAVVHTRDAWTLKGSAGFSQVGGQRNFGFSVH
                     EANFLGFGKDLLLAHEKTPERSTDTVIYRDHQFLASPWTLGARYQSLTDGQTRFLEVA
                     RPFRSLETPWSLTFSAESSDTVQSIYNLGLTAYTFRSRWETALAEGAWAWSVAGDRAI
                     RLGGGIDLKRTEFGPIQALDAGLLPAPPLRGRRLTGLHLTWALFEGRFRTYRDLAGVV
                     HPEDYNLGWDAT"
     gene            1296..>2885
                     /locus_tag="VK150_01540"
     CDS             1296..>2885
                     /locus_tag="VK150_01540"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HLP30011.1"
                     /translation="MDLTWLSANPGLTFLALLGTAFALVLLSKWIRYIPNNRVGIVEK
                     LISGKGSVKTGLIALGGEAGFQPQLLRGGWHLLTPFQYRIHKMPLVTIPQGKIGYIFA
                     RDGKDLPPTQTLASNTRGADFQDVVAFLQNGGQKGPQRQILREGIYAINLAQFVVLTE
                     DQLYYLPLDKSELETFQKMSAIIAERAGWRPVIIRGADDAVGIVTVHDGPSLPSGEII
                     ASTVGEDPRQAATYHNNFQDADKFLVAGGQRGRQYQVLVEGTYYINRLFATIEMIPKT
                     VVEVGTVGVVVSYTGAIGTDISGQEYRHGELVANGTRGVWSDPLLPGKYAFNTYAGKV
                     LMVPTTNFILKWTKGEVGSHKFDENLTEVSLITKDAFEPSLPLSVVVHIDYRKAPLVI
                     QRFGDIKKLVEQTLDPMVSAYFKNIGQTRTLIQLIQDRSAIQEQSGVQMKEKFSQYNL
                     ELQEVLIGTPTSGAPGGQIEQILVQLRSRQIADEQVETYGRQQSAATKERELREAEAT
                     AKQQTALTESAISIQVQSNQGK"
BASE COUNT          529 a         1000 c          933 g          423 t
ORIGIN      
        1 gggtggcgtc ccaacccagg ttgtagtcct cgggatggac caccccggcc aaatcccggt
       61 aagtccggaa ccgcccctcg aacagggccc aggtcaggtg gagccctgtg aggcggcggc
      121 ccctcaacgg gggcgccggc aggaggcccg cgtcgagggc ttggatgggc ccgaattccg
      181 tccgcttcag atcgatgccg ccgcccagcc gaatcgcccg gtcccctgcc accgaccaag
      241 cccaggcgcc ctcggcgagg gccgtctccc accgggagcg gaaggtgtag gcggtgaggc
      301 ccaggttgta gattgactgg accgtatccg acgactccgc gctgaaggtg agcgaccagg
      361 gcgtctcgag gctgcggaaa ggccgggcca cctcgaggaa cctggtctgg ccgtccgtga
      421 gcgactggta gcgggcgccc agtgtccagg ggctggcgag gaactggtgg tcgcggtaga
      481 tcaccgtgtc ggtggaccgc tccggcgtct tctcgtgggc cagcaggagg tccttgccga
      541 agcccagaaa gttcgcctcg tggacagaga atccgaaatt ccgctgcccg cccacctggg
      601 agaagccagc gctgcccttg agggtccagg cgtcccgggt gtggaccacc gcgcggacgg
      661 cgcccgtctc atcgacctcc ggcacgatcc acgcgtcctt caggaagcgg aaggcccgca
      721 ggttccgctc ggtctcatga atcagccgcg cgttcaccac ctctcccggg cggaagagga
      781 gttcccggcg caccacctgc tcccgcgttt cgatgtgcag gaggttcgcg aggcgaccaa
      841 tccagtgatt ctcatgggga tggttgggat cgaagatttc gtggatccgg aaggtgatgc
      901 cggcgatggg cacctgccgg gcctcgagct cctcccaggt gggtggagcc tgggcggaca
      961 gagtgcaggc cagcaggcag gccagtcccg cccacaagcc gcgaaggcgg ctcggcgccc
     1021 cgtgatggga ggtatgcatg tcccaaagca tagggtgcga tcgccccgga cggcgcccgg
     1081 gaccgaccgg cccccgggga aattggtgat ggccgtcacg gcagccaggg tggattcgcc
     1141 tatcctcttc gccttcgtat ggttctttcc ccgttggatc ccagccgccc gttcccccag
     1201 gaaccggggc gccggaccac ggacgaaccc cggaacccag gcgggacggc gcctggggcc
     1261 ggtatccttc ctgaaacccg tcccccggag tcctcatgga cctcacctgg ctttccgcca
     1321 accccggcct gacctttctg gccctcctcg gcaccgcctt cgcgctggtg ctgctcagca
     1381 agtggatccg ctacatcccc aacaaccgcg tgggcattgt ggaaaagctc atcagcggca
     1441 agggctcggt caagaccggc ctcatcgccc tgggcggcga ggcgggcttc cagccccagc
     1501 tgctccgcgg cggctggcac ctgctcacgc ccttccagta ccgcatccac aagatgcctc
     1561 tggtgaccat cccccagggc aagatcggct acatcttcgc ccgtgacggc aaggacctgc
     1621 cgcccacgca gaccctggcc agcaacaccc ggggcgcgga cttccaggac gtggtggcct
     1681 tcctgcagaa cggcggccag aagggccccc agcgccagat cctccgtgaa ggcatctacg
     1741 ccatcaacct cgcgcagttc gtggtgctca cggaagacca gctctactac ctgcccctcg
     1801 acaagagcga gctggagacc ttccagaaga tgagcgccat catcgccgag cgcgccggct
     1861 ggcggcccgt gatcatccgc ggcgccgatg acgcggtggg catcgtcacc gtgcacgacg
     1921 gcccgagcct gcccagcggc gagatcatcg cctccaccgt gggcgaggat ccccgccagg
     1981 ccgcgaccta ccacaacaac ttccaggatg ccgacaagtt cctggtggcc ggcggccagc
     2041 gcggacgcca gtaccaggtg ctggtggaag gcacctacta catcaaccgc cttttcgcga
     2101 ccatcgagat gatccccaag accgtggtcg aggtgggcac cgtgggtgtg gtggtgagct
     2161 acaccggcgc catcgggacg gacatcagcg gccaggagta ccgccacggc gagctggtgg
     2221 ccaacggcac ccggggcgtg tggagcgatc cgctgctgcc gggcaagtac gccttcaaca
     2281 cctacgccgg caaggtgctc atggtgccga ccaccaactt cattttgaag tggaccaagg
     2341 gcgaggtggg cagccacaag ttcgacgaga acctcaccga ggtgagcctc atcaccaagg
     2401 atgccttcga gcccagcctg ccgctttccg tggtggtgca catcgactac cgcaaggcgc
     2461 ccctggtcat ccagcgcttc ggcgacatca agaagctggt ggagcagacg ctggacccca
     2521 tggtcagcgc ctacttcaag aacatcggcc agacccgcac gctcattcag ctcatccagg
     2581 accgcagcgc catccaggag cagagcggcg tccagatgaa ggagaagttc agccagtaca
     2641 acctggaact ccaggaagtg ctgatcggca cgcccaccag cggcgccccc ggcgggcaga
     2701 tcgagcagat cctcgtgcag ctccgcagcc gccagatcgc cgatgagcag gtggagacct
     2761 acggccgcca gcagagcgcc gcgaccaagg agcgggaact tcgcgaggcc gaagccaccg
     2821 ccaagcagca gaccgccctc acggaatcgg ccatcagcat ccaggtgcag agcaaccagg
     2881 gcaag
//
LOCUS       DATGWW010000106         1697 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_415563, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000106 DATGWW010000000
VERSION     DATGWW010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415563"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(87..1088)
                     /gene="rpoS"
                     /locus_tag="VK150_01545"
     CDS             complement(87..1088)
                     /gene="rpoS"
                     /locus_tag="VK150_01545"
                     /inference="COORDINATES: protein motif:HMM:NF004207.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoS"
                     /protein_id="HLP30012.1"
                     /translation="MSKSLNADSFEEFMEPEVADAADLDEEEEEESEELLAEGDAEEG
                     EPAEPTYAPGHVPENQMDATRLYLSEIGFSPLLSAQEEVYFARLALKGDEAARKRMIE
                     SNLRLVVKISRRYLNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTI
                     ERAIMNQTRTIRLPIHVVKEINVYLRAGRQLAQRLDHEPTPEDIAQVLGKPVEDVKRM
                     LSLNERVTSVDVPLGRDADKSLLDAIPDENNTDPSDLLQDDDMRGNIESWLGQLTDKQ
                     REVVERRFGLHGHDVSTLEEVGNQIGVTRERVRQIQIEALKRLREIMESQGFTQEAL"
     gene            complement(1107..>1697)
                     /locus_tag="VK150_01550"
     CDS             complement(1107..>1697)
                     /locus_tag="VK150_01550"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HLP30013.1"
                     /translation="LWNHILPPYIIHAGDDLVILDHPADDTDETESAPPEPVAAARPG
                     PKSPPPKSGKPATSPRPPVNATPARTASTVRWSWPTQGKVAARFSAGAGRKGVDLAGK
                     LGQPVKAAADGDVVYSGSGLIGYGNLVIIKHDEVFLSAYAHNRKLLVKEGDKVKAGQP
                     IGEMGQNAKAGSILHFEIRRHGKPVDPLLYLPNQPS"
BASE COUNT          251 a          528 c          574 g          344 t
ORIGIN      
        1 gtgtcccccg tggtcaaagg cttttctcct ccccaaaaaa aaaccccggc cagtgccggg
       61 gtcttttcgt aggtgtgacc gcggggctag agcgcttcct gcgtgaaccc ctggctctcc
      121 atgatctcgc gcaggcgctt caaggcctca atctggatct ggcggacacg ctcgcgggtg
      181 acgccgatct ggttgccaac ctcttccaac gtgctgacat cgtggccgtg caggccgaac
      241 cggcgctcca ccacctcgcg ctgcttgtcg gtgagctggc cgagccagga ctcgatgttg
      301 ccgcgcatgt cgtcgtcctg aagcaggtcc gacggatcgg tgttgttctc gtccgggatg
      361 gcgtcgagca gggacttgtc ggcgtcgcgc ccgaggggca cgtccacgga ggtgacgcgc
      421 tcgttgaggc tcagcatccg cttcacgtcc tccaccggtt tgccgagcac ctgggcgatg
      481 tcctcggggg tcggctcgtg gtcgaggcgc tgggccagtt ggcggccggc gcgcaggtag
      541 acgttgatct ccttcaccac gtggatggga aggcggatgg tgcgggtctg gttcatgatg
      601 gcccgctcga tggtctggcg gatccaccag gtggcgtagg tggagaagcg gaagccgcgc
      661 tcgggatcga acttctcgac ggcgcggatg aggcccaggt tgccctcttc aatcaggtcc
      721 agcagggcca ggccgcggtt gagataacgg cgactgatct tcaccaccag gcgcagattg
      781 ctctcgatca tgcgcttgcg ggccgcctcg tcgcccttca gggccaggcg ggcgaagtag
      841 acctcttcct gggcggagag cagcggggag aaaccaatct cgctcagata gagccgggtg
      901 gcgtccatct ggttctcggg cacgtggccc ggggcatagg tgggctcggc cggctcgccc
      961 tcctcagcat caccctcggc caggagctct tcggactcct cttcctcttc ctcgtccagg
     1021 tccgccgcgt ccgctacctc gggttccatg aactcttcga aagagtcggc gttcaggctc
     1081 ttggacataa ggcgatcctt ctgggtctat gagggctgat taggcaagta aagcaggggg
     1141 tcgacaggtt ttccatgccg tctgatttca aaatgcagta tagaccccgc tttggcgttc
     1201 tgccccatct ctccgatggg ctgtcccgcc ttcaccttgt ccccctcctt caccaaaagt
     1261 ttacggttgt gggcgtaggc gctgagaaac acctcgtcgt gtttgatgat gacgagattg
     1321 ccatagccga tgaggccgct gccgctgtag accacgtcgc cgtcggccgc cgccttgacc
     1381 ggctggccca gctttccggc caggtcgacg cccttgcgtc ccgcacccgc ggagaagcgt
     1441 gccgccacct tgccctgggt gggccacgac catcgcacgg tggaagcggt ccgggcggga
     1501 gtggcgttaa cgggaggcct gggtgaggtt gcgggcttgc ccgatttggg cgggggactc
     1561 ttgggaccgg gccgcgccgc ggccaccggc tcggggggcg cggactccgt ttcatcggtg
     1621 tcgtcggcgg ggtggtccag gatcaccagg tcgtcgcccg catggatgat gtagggcggc
     1681 aggatgtggt tccagag
//
LOCUS       DATGWW010000107         1855 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_415615, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000107 DATGWW010000000
VERSION     DATGWW010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1855
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415615"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1476)
                     /locus_tag="VK150_01555"
     CDS             complement(<1..1476)
                     /locus_tag="VK150_01555"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30014.1"
                     /translation="MGQRLLLVDSDRMFLKEHQVSLESAFDLDVLSTTEGVLPRLESG
                     AYAAVLICVEVADNKGYALCSTLRKHANLDGVKVALISAKASEEEYRRHQSLKGKADL
                     YLHKPIAPSALVAALAPLVPGRTLDPDNPLGDLVDSELGDDWLDGLKSALDGPAAPPP
                     VPAPAPTPVFGVRHDAPAHTTNLDAKATAPPDTSRLRLLEEQVAALHEELRAKDQKLQ
                     AAEAEAQQIQRQLNSVTLNLDELERSNREAETLKARLSETEAALRALETARGQEGESS
                     ESMKAQLKEALTERTELIHQVETLNQQVGEKAQRAIELLKERDRLLHENLDLEPFRAK
                     AQELEAALATSQQELKAAKDAQEQLNATIEGLVAQHTTLEGVHQAALLEVAGHKEKAH
                     MLQLEVAGLEATLRGQGRDLAELGDQLRAREAELEVAQARVLERDQQLQGRDEAIQGH
                     QEEIGHLTIRMAALRQEFDEAIIQHEGERLELMNGLDQKEAE"
     gene            complement(1583..>1855)
                     /locus_tag="VK150_01560"
     CDS             complement(1583..>1855)
                     /locus_tag="VK150_01560"
                     /inference="COORDINATES: protein motif:HMM:NF012803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HLP30015.1"
                     /translation="NLEKSYGFAVESLDVKNRLKGVVVTSVDQRSPAAERGLSTGMVI
                     TEVGRQPVNNLAEFNAQVKKAGGRTLLLFIQSPNGSQKVTLAIPPR"
BASE COUNT          231 a          622 c          643 g          359 t
ORIGIN      
        1 ctcggcctcc ttctggtcga ggccgttcat cagctccagc cgctcgcctt catgctggat
       61 gatggcctcg tcgaactcct ggcggagggc cgccatccgg atcgtgaggt ggccgatctc
      121 ctcttggtgc ccctggatgg cctcgtcgcg gccctgaagc tgctggtccc gttcgagcac
      181 ccgcgcctgg gcgacctcca gctccgcttc ccgggcccgc agttgatcgc ccaactcggc
      241 caggtcccgg ccctggcccc gcagggtggc ttcgagtccg gccacctcca gctgcagcat
      301 gtgggccttc tccttgtggc ccgccacctc cagcagggcc gcctggtgga cgccctccag
      361 ggtggtgtgc tgggccacga gcccttcgat ggtggcgttc agctgctcct gggcgtcctt
      421 ggcagccttc agctcctgct ggctcgtcgc cagggcggcc tccagctcct gggccttggc
      481 gcggaagggc tccagatcca ggttctcgtg gagcaggcgg tcccgctcct tgagcagctc
      541 gatggcccgc tgggccttct cgcccacctg ctggttgagg gtctccacct ggtggatgag
      601 ttccgtgcgc tccgtgagcg cttccttgag ctgggccttc atcgattcgg aggactcgcc
      661 ctcctggccc cgcgcggtct cgagggcccg cagggcggct tcggtctcgc tgagccgggc
      721 cttgagcgtc tcggcctccc ggttgctgcg ctccagttcg tcgaggttca gggtcaccga
      781 gttcagctgc cgctggatct gctgggcctc ggcctcggcg gcttggagct tctggtcctt
      841 cgcccgcagc tcctcgtgga gggcggcgac ctgctcttcc agcaggcgca ggcggctggt
      901 gtcagggggg gccgtggcct tggcgtcgag gttcgtggtg tgggccggtg catcgtggcg
      961 cacaccgaac acgggggtgg gggccggggc cggaacaggc ggtggcgcgg cgggaccgtc
     1021 cagggcgctc ttgaggccat ccagccagtc gtcgcccagt tccgaatcca ccagatcgcc
     1081 cagggggttg tccggatcga gggtccggcc cggcacaagg ggcgcgagcg cggccaccag
     1141 agcgctgggg gcgatgggct tgtgcaggta gagatccgcc ttccccttca ggctctggtg
     1201 ccggcggtac tcctcctcgc tggctttcgc actgatcagg gccactttca ccccatccag
     1261 gttggcgtgc ttgcggaggg tggagcagag ggcgtagccc ttgttgtcgg ccacttccac
     1321 acagatgagc accgccgcgt aggcgccgct ctccaggcgc ggaagcacac cctccgtggt
     1381 agaaagcaca tcgaggtcga atgccgattc aaggctgacc tggtgttcct tgaggaacat
     1441 gcggtcgctg tccacaagga gaaggcgctg gcccatggtt gatccttagc cctggttgaa
     1501 cctttgagtt tagcggaagg acggaagccc cggtcatccc ggggcttccg tgcgcaaaac
     1561 caggcttccg ggaccccggc cctcagcggg gcgggatggc cagggtgact ttctggctgc
     1621 cgttgggcga ctggatgaag agcagcaggg tgcggccccc ggccttcttc acctgggcgt
     1681 tgaactccgc caggttgttc acgggctggc ggcccacctc ggtgatgacc atgccggtgg
     1741 agagcccccg ctcggccgcg ggcgaacgct ggtccaccga ggtgacgacc acgcccttga
     1801 ggcggttctt gacgtcgagg gattccaccg cgaacccgta ggatttctcc agatt
//
LOCUS       DATGWW010000108         1954 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_234910, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000108 DATGWW010000000
VERSION     DATGWW010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1954
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234910"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..450)
                     /locus_tag="VK150_01565"
     CDS             complement(<1..450)
                     /locus_tag="VK150_01565"
                     /inference="COORDINATES: protein motif:HMM:NF016764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0031267 - small GTPase binding [Evidence
                     IEA];
                     GO_process: GO:0006888 - endoplasmic reticulum to Golgi
                     vesicle-mediated transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Yip1 family protein"
                     /protein_id="HLP30016.1"
                     /translation="MSDQSSSLYGDQPEPPKAKAPSLMEQIIGVFTSPVELFQRLNRT
                     PSWGWALGLIIAGALVITVIWGLKVDVDEMLRPILERNPNVQSSQIDMIIEMQKKFIL
                     PFSILGALFGTAAAMALVALFYWLIGKAMPEAEAPSYPQALSAAVVPS"
     gene            667..1881
                     /gene="rocD"
                     /locus_tag="VK150_01570"
     CDS             667..1881
                     /gene="rocD"
                     /locus_tag="VK150_01570"
                     /EC_number="2.6.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR01885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004587 - ornithine aminotransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HLP30017.1"
                     /translation="MATLAAKSEALIAQENQFGAHNYHPLDVVCTKGEGVFLTDVDGK
                     QYMDFLAAYSAVNQGHNHPKIGEAMIAQIKTLALTSRAFRNDQFPPLLEKLCKLTGFD
                     KALLMNSGAEAVETALKAMRKWGYDKKGIEYGKAEIIVADGNFHGRTTTIVGFSTDPD
                     STSKFGPFTPGFVIVPYGDLDAVKKAINKNTCAIFMEPIQGEGGVVIPPMGFLKGLRD
                     LADANHCLLVLDEIQSGLGRTGKLFAFEHEGIRPDGITIGKALSGGYYPVSAFLANDE
                     VMDVFTPGIHGSTYGGNPLACAVASAALDVLVDEKLVEKTADLGAYFKQRLQNLKTDK
                     VKEIRCIGLWAGVQLKPEAGGARKYCYALKDLGMLCKDTHVDTIRLAPPLVITKAQID
                     WAVDQLEAVLQG"
BASE COUNT          375 a          647 c          622 g          310 t
ORIGIN      
        1 gctcggcacc acggcggcgc tcagggcctg gggatagctg ggcgcctcgg cctcaggcat
       61 ggccttcccg atgagccagt agaagagcgc caccagcgcc atggctgcgg cggtgccgaa
      121 cagcgcgccg aggatgctga aggggaggat gaacttcttc tgcatctcga tgatcatgtc
      181 gatctgggag gactggacgt tgggattgcg ctcgaggatg gggcgcaaca tttcgtccac
      241 atccaccttc aggccccaga tcacagtgat gaccagggcg ccggcgatga tgaggcccag
      301 agcccaaccc cagctggggg tgcggttcag gcgctggaag agttcgacgg gactggtgaa
      361 cacgccgatg atctgctcca tcaggcttgg ggccttggcc ttcgggggtt ccggctggtc
      421 gccgtagagg gaggaggact ggtcgctcat gggtgtctcc gatgaataca cgataggctg
      481 ggcggcattc attgtcgcag gccgccggcc aacgggcgaa atccgccgcc gaccgggagc
      541 cgggggctgg ggggcgggct atgacaattt gtcaaggaat ccttgataaa tctgacaatc
      601 atggtcgccg ggattagact atcgcctgct cgtctgaccc aggtccgaac ccattccgga
      661 ggtcccatgg ccaccctcgc cgccaagtct gaagccctca tcgcgcagga gaaccagttc
      721 ggcgcgcaca actaccatcc cctcgacgtg gtctgcacga agggcgaagg cgtgttcctc
      781 acggatgtgg acggcaagca gtacatggat ttcctcgcgg cctactcggc cgtgaaccag
      841 ggccataacc acccgaagat cggcgaggcc atgatcgccc agatcaagac cctggcgctc
      901 accagccgcg ccttccgcaa cgaccagttc cccccgctgc tcgagaagct ctgcaagctc
      961 accggcttcg acaaggccct gctcatgaac agcggcgccg aggccgtcga gaccgcgctg
     1021 aaggccatgc ggaagtgggg ctacgacaag aagggcattg agtacggcaa ggccgagatc
     1081 atcgtggccg acggcaactt ccacggccgc accaccacca tcgtgggctt cagcaccgat
     1141 cccgacagca ccagcaagtt cggccccttc acgcccgggt tcgtgatcgt gccctacggc
     1201 gacctcgacg ccgtgaagaa ggccatcaac aaaaatacct gcgccatctt catggagccc
     1261 atccagggcg agggcggcgt ggtcattccg cccatgggct tcctgaaggg cctgcgcgac
     1321 ctggccgatg ccaaccactg cctgctggtg cttgacgaga tccagtcggg cctgggccgc
     1381 accggcaagc tcttcgcctt cgagcacgag ggcatccgcc ccgatggcat caccatcggc
     1441 aaggccctga gcggcggcta ctaccccgtg agcgccttcc tggccaacga cgaggtcatg
     1501 gacgtcttca ccccgggcat ccacggcagc acctacggcg gcaacccact ggcctgcgcc
     1561 gtcgccagcg cagccctgga cgtgctggtg gacgagaagc tcgtggagaa gaccgccgac
     1621 ctgggcgcct acttcaagca gcgcctgcag aacctcaaga ccgacaaggt gaaggagatc
     1681 cgctgcatcg gcctctgggc cggcgtgcag ctgaagcccg aggctggcgg cgcccgcaag
     1741 tactgctacg ccctcaaaga cctcggcatg ctctgcaagg acacccacgt ggacaccatc
     1801 cgcctggcgc cccccctcgt catcaccaag gcgcagatcg actgggcggt ggaccagctc
     1861 gaggcggtcc tgcagggctg attcccacag acgttaccca ttcgtgaccc cattcccctg
     1921 gggccggatg ggaccatggt gggcaggggc gggt
//
LOCUS       DATGWW010000109         2841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_140097, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000109 DATGWW010000000
VERSION     DATGWW010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2841
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140097"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..446)
                     /locus_tag="VK150_01575"
     CDS             complement(<1..446)
                     /locus_tag="VK150_01575"
                     /inference="COORDINATES: protein motif:HMM:NF025587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HLP30018.1"
                     /translation="MASPAFQVETVHLSQFREGSPRDRAEFIRVLGDSFRHTGFVKVD
                     GHQVRPVDVDGAYRAAREFFALPEDIKRRYQVPGTGGARGFTPFGSEHAKDNPVGDLK
                     EFWHVGQELPAGHPLKATYGDNLWPDAEVPGFKAHTLALYRALEDCA"
     gene            complement(592..1650)
                     /gene="recA"
                     /locus_tag="VK150_01580"
     CDS             complement(592..1650)
                     /gene="recA"
                     /locus_tag="VK150_01580"
                     /inference="COORDINATES: protein motif:HMM:TIGR02012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HLP30019.1"
                     /translation="MAAAEQDDRLKALTRTVADIERAFGKGSIMKLGDRMSGAEGIEV
                     ISTGSISLDSALGVGGVPKGRVVEVYGPEASGKTTLALHMVAQAQKKGGLAAYIDAEH
                     ALDPEYAQKLGVDVANLFISQPDSGEQALEICDQLVRSGALDIIVVDSVAALVPKAEI
                     DGEMGDSHVGLQARLMSQALRKMTGTISKTHTCVVFINQIRMKIGVMFGNPETTTGGN
                     ALKFYASVRLDVRSIQSIKGNTGDPLVAAKDEDSSVIGKKTKVKVVKNKVAPPLKVAT
                     FDIMYGEGISRTSELVELGTQLEIIQKSGSWYSYKDSRLGQGAENVKKLFTDNPELAD
                     EVEGLIRERLGMKATVEV"
     gene            1752..>2841
                     /locus_tag="VK150_01585"
     CDS             1752..>2841
                     /locus_tag="VK150_01585"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLP30020.1"
                     /translation="MPTDPHPPLHAPQGASLEAQLAATRAEADRYRAMVEDLKEVIFQ
                     VDRQGHWAFLNRAWEELTGHPVEDCLGRPFLSFLHPADNPRFLNMLTYAVDTGQTVFD
                     GEFRIPTRAGDVKWVEAHQRIAYDASGVVLGVSGTWSKITERKHTEIVLRMATSRLRA
                     LIENMQAGILVETEGRKIALLNETFCQMFQVPVPAHMLVESDTRDLLEECLRLLVDRD
                     GFLARTDAVAGGRVPVQGEELALVDGRILSRDFVPILVGEEYLGHLWQYHDITERRRA
                     ELKLEEAARELEGKNWELAEARDRALEMSGLKSEFLANMSHEIRTPMNGIIGMTGLLL
                     DTPLGAEQRQYAETVRSCGEALLTLINDI"
BASE COUNT          440 a          952 c          972 g          477 t
ORIGIN      
        1 gcgcagtcct ccagggcccg gtagagggcc agggtgtggg ccttgaagcc cggcacctcg
       61 gcgtcgggcc agaggttgtc gccataggtg gccttgaggg ggtggcccgc cggcagttcc
      121 tggcccacat gccagaactc cttgaggtcg cccacggggt tgtccttggc gtgctcgctg
      181 ccgaagggcg tgaagccccg ggccccgccg gtgccgggca cctggtagcg gcgcttgatg
      241 tcttcaggca gggcgaagaa ttcccgggcg gcccggtagg ccccgtccac atcgacgggc
      301 cggacctggt ggccgtccac cttcacgaac ccggtgtgcc ggaagctgtc gcccagcacc
      361 cggatgaact ccgcgcgatc ccgggggctg ccctcgcgga actgggagag gtggacggtt
      421 tcgacctgga aggcggggct ggccatgggc acctcggagg gaccggccat gatagctgac
      481 gcgacaggaa tcggcggacc gccctgccgc gccgggcctc aaaaaaacgg cgacggccgg
      541 aggccgccgc cgtctgccga ccccttccaa gggcgcgcag ggggatgggt tctagacttc
      601 gaccgtggcc ttcatgccga ggcgctcgcg gatgaggccc tcgacctcgt cggccagctc
      661 ggggttgtcg gtgaagagct tcttcacgtt ctcggcgccc tggcccaggc ggctgtcctt
      721 gtagctgtac caggagccgc tcttctggat gatctccagc tgggtgccca gctccaccag
      781 ctcgctggtg cggctgatgc cctcgccata catgatgtcg aaggtggcca ccttcagcgg
      841 gggcgcgacc ttgttcttga ccaccttcac cttggtcttc ttgccgatga cggaggaatc
      901 ctcgtccttg gcggccacga ggggatcgcc ggtgttgccc ttgatgctct ggatgctgcg
      961 gacatccagg cgcacggagg cgtagaactt cagcgcgttg ccgcccgtgg tggtctcggg
     1021 gttgccgaac atcacgccga tcttcatgcg gatctggttg atgaagacca cgcaggtgtg
     1081 ggtcttgctg atggtgccgg tcatcttgcg gagggcctgg ctcatgaggc gggcctgcag
     1141 gcccacgtgg ctgtcgccca tctcgccgtc gatttcggcc ttgggcacca gggcggccac
     1201 cgagtccacc acgatgatgt ccagggcgcc gctgcgcacc agctggtcgc agatctcgag
     1261 ggcctgctcg ccgctgtcgg gctggctgat gaagaggttg gccacgtcca cgcccagctt
     1321 ctgggcgtat tcgggatcca gggcgtgctc ggcgtcgatg taggcggcca ggccgccctt
     1381 cttctgggcc tgggccacca tgtggagggc cagggtggtc ttgccgctgg cttccggtcc
     1441 atagacctcg accacgcggc ccttgggcac gccgcccacg cccagggcgg aatccaggga
     1501 gatggagccg gtgctgatga cctcgatgcc ctcggccccg ctcatccggt cgcccagctt
     1561 catgatcgag cccttgccga aggcccgttc gatgtcggcc acggtgcggg tgagggcttt
     1621 aaggcgatcg tcttgctcgg ccgcggccat tgggtcctcc agagggatgc ttcccaggat
     1681 gaggcaaaaa gcgaaaaaaa caagaaatct tttttcaggg ttctccccag gcccgccgaa
     1741 gaggggaggg catgccgact gatccccacc cccccctcca cgctccccag ggcgcttccc
     1801 tcgaggccca gctcgccgcg acccgggccg aggccgaccg ctaccgggcc atggtcgaag
     1861 acttgaaaga agtcatcttc caggtcgacc ggcagggcca ctgggccttc ctgaaccggg
     1921 cctgggagga actcaccggc caccccgtgg aggattgcct gggccggccc ttcctgagct
     1981 tcctgcatcc ggcggacaac ccccgcttcc tgaacatgct cacctatgcg gtggacacgg
     2041 gccagaccgt gttcgacggc gagttccgca tcccgacccg ggccggagac gtgaagtggg
     2101 tggaggccca ccagcggatt gcctacgacg cctccggcgt ggtcctcggc gtctcgggca
     2161 cctggagcaa gatcactgag cgcaagcaca ccgagatcgt gctccgcatg gccacgagcc
     2221 gcctccgggc cctcatcgag aacatgcagg ccggcatcct ggtggagacc gaaggccgga
     2281 agatcgcgct gctcaacgag accttctgcc agatgttcca ggtgcccgtg ccggcccaca
     2341 tgctggtgga gagcgacacc cgcgacctgc tggaagagtg tctgcgtctc ctggtggacc
     2401 gggacgggtt cctggcccgc accgatgccg tggccggggg ccgggtcccc gtccagggcg
     2461 aggaactcgc cctggtggac gggcgcatcc tgtcgcggga tttcgtcccc atcctggtgg
     2521 gcgaggaata cctgggccac ctctggcagt accacgacat cacggagcgc cgccgcgccg
     2581 agctgaagct ggaggaggcg gcccgggagc tcgaggggaa gaactgggag ctggccgagg
     2641 cccgcgaccg ggccctggag atgtccggcc tcaaaagcga gttcctggcc aacatgagcc
     2701 acgagatccg cacgcccatg aacggcatca tcggcatgac cggcctgctg ctcgacacgc
     2761 ccctcggggc cgagcagcgt cagtacgccg agacggtgcg ctcctgcggg gaggcgctgc
     2821 tcaccctcat caacgacatc c
//
LOCUS       DATGWW010000110         6919 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_140102, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000110 DATGWW010000000
VERSION     DATGWW010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6919
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140102"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            55..1818
                     /locus_tag="VK150_01590"
     CDS             55..1818
                     /locus_tag="VK150_01590"
                     /inference="COORDINATES: protein motif:HMM:NF040763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent [FeFe] hydrogenase, group A6"
                     /protein_id="HLP30021.1"
                     /translation="MSQMINLTIDGEPILVPAGTTVMDAAETLGIHIPRLCYHPELSL
                     EGNCRVCVVQVEGFDHCLASCATTAWEGMEVQTNSPVIREARRDIVELLLDNHPKDCQ
                     TCDRDGVCELQNLAYRMGVRERHFEGKRKQFPIDDAGASVVRNAEKCILCGRCIRVCG
                     EVQGVFNLSQHGRGFTTVVGPANLAPMDESACIQCGQCVSVCPTAAFLEQDHTERVWK
                     ALGYPRTEKHVVVTTAPAIRAALGEAFGLPMGTPVTGKMVTALRRMGFDAIFDVNFSA
                     DLTIMEEAHELLKRLEGGGPLPLLTSCSPGWVSFLEKFYPEMIPHMSSCKSPMQMQST
                     LIKTYYAKQKGMDPKDIYVVSVMPCVAKKFEAARPEHTLDGMPTTDAVITTRELAQMI
                     KSYGIDFTRLPDSDFDHPLGTSSGAGDIFGATGGVMEAALRTAAFKLTGKNLGNLELT
                     EVRGVTGEIREASISLAGKTLNVAVANGLQNAKVLLDAVKRGEKDYHLIEIMACPGGC
                     ICGGGQPYPPIGTYTMNHDLAQARAKALYRIDSGKTLRCSHDNPDIQKLYADYLGEPL
                     GPTAHELLHTHYTARTPRGIR"
     gene            1815..2369
                     /gene="nuoE"
                     /locus_tag="VK150_01595"
     CDS             1815..2369
                     /gene="nuoE"
                     /locus_tag="VK150_01595"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF005722.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HLP30022.1"
                     /translation="MSACCACTTDNWAELERGYRAMLPESILAFIDENRGRERNESML
                     IATLHMVQAHFGHLGPGHLEAVAQLMQIPLAKVTGVATFYHYFRLQPRGKYLINVCLG
                     TACYVKGAEKVAQKLSDELGIHFGETSKDGIFSLESTRCVGTCGLAPVVMIGDEVHGP
                     LTPGQVPALLESYLARAAEELVLP"
     gene            complement(2471..3637)
                     /locus_tag="VK150_01600"
     CDS             complement(2471..3637)
                     /locus_tag="VK150_01600"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLP30023.1"
                     /translation="MAVRDPLSRLQWLVFALVSAVFTTVYIPQPVLPVLRQQFGVGEG
                     AASLTVSAVVLGIALANLPFGALADRFPIRPILLAGGLMVTAAGLAAALAPTLPLLVA
                     ARFIQGLFIPSLTTCLAAYLARVMPDERLNVVMGAYVSATVVGGLSGRLLGGFLLPAA
                     HWRWAFFAAAALLLGATLAAYAGLPPEADHGHAAQEPARFRDVLFRHDLFRLYCVGGG
                     AFFVFSSVFNYLPFYLHGAPFHWSTRAVTLLYLSYVVGVVIGPLAGRLSNRVGNGTAM
                     VLGALVLGAGLAVTLIPEGWAVALALGLVCAGFFTLHASAAGALNRKLSAGRGRANAF
                     YVLFYYLGGAAGITLSGHAYHLAGWHGVVALGALALLVPLSTGALEMRAGRSAG"
     gene            3912..4838
                     /locus_tag="VK150_01605"
     CDS             3912..4838
                     /locus_tag="VK150_01605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30024.1"
                     /translation="MIRTTLEKRLPGDFERQVAIREYLERACEAFVASGWADPKFLTE
                     LSSREEQKFWASVSEALVYQLLLGKTFGARRNPGRGPDFLIQNGSQRIWIEVTCPEPT
                     GLPENWKKIAWGEASSVPHELVLLRWTSAIKTKANALIGNMTRKKTGYLQTGIVGAND
                     AYVIAVNACCLRHGPFPGILGISQFPYAAEATLPIGPYALQIDSKSLQVVDRGHQYRP
                     FLLNKNNAEVSTKLFFDPQYNGISAIWALDLNGSSAIGNHEPIALVHNPNALNPLPPG
                     FLPSQNEYVVTIGENEFGVSKQPGTLSPAANP"
     gene            complement(4972..5823)
                     /gene="rsmI"
                     /locus_tag="VK150_01610"
     CDS             complement(4972..5823)
                     /gene="rsmI"
                     /locus_tag="VK150_01610"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: protein motif:HMM:TIGR00096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HLP30025.1"
                     /translation="MTGHLILVPTPIGNLGDLTDRAREALAGADLVACEDTRRTGGLL
                     KHLGMDKPLLRFDDHAGDAAFERLGLELLSGRTVAYCSDAGMPGINDPGFEIARAARA
                     AGAKVTVLPGASAVLLAVVASGLPCHAFGFHGYLPNRSEPRRTMIKKLGAEEETVVVF
                     ETPHRIHETLSDLEELLPGREIALGRELTKLHETWYRGTPAQVSQQLGREDRGEMVLV
                     LAGASAKRTVTEVDAAFDGEALPEWARTFLLAAREGGMTQREAVKPLAKHLGVSASDL
                     YRMASEL"
     gene            5905..6315
                     /locus_tag="VK150_01615"
     CDS             5905..6315
                     /locus_tag="VK150_01615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30026.1"
                     /translation="MRRLLATLPLVALMACAVPSHTPTYTRGYPGLKGVMNHLPDGRW
                     QFVMELPNPEKRHTFRLESTEALDIRMDLAEPKSWATWVVDAARVEDGKPFQMKLWAD
                     GDDFPLLVQYPKGGRDYGREGVSALITLSILPRR"
     gene            complement(6331..>6919)
                     /locus_tag="VK150_01620"
     CDS             complement(6331..>6919)
                     /locus_tag="VK150_01620"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HLP30027.1"
                     /translation="GLPVLFRLRQVLQGVRGDEAAPADAILVLGRRLERDELTPVFVA
                     RLGHALDLWKRGLAPRIFVAGGATGASSRSEAEAGRDWLVAQGVPRAVVLLEDRSQHT
                     LENLFNVRSHMRAEGWHTLLLVSDPLHLTRARATARGLNLEVRCCPAQGCPPPLGTFP
                     AWRRACQEAFLLHWYHTGMAYSRLIRSERQLERVT"
BASE COUNT         1294 a         2395 c         2165 g         1065 t
ORIGIN      
        1 ggggagcccc ccgcgcagcc tcctacgcag cgcctcgcag ccttggagtc acccatgtcc
       61 cagatgatca acctcacgat cgacggcgaa cccatcctgg tgcccgcggg aaccacggtc
      121 atggacgccg ccgaaaccct cggcatccac atcccgcgcc tctgctacca ccccgagctc
      181 agcctcgagg gcaactgccg ggtctgcgtg gtgcaggtgg agggcttcga ccactgcctg
      241 gcgtcttgcg ccaccacggc ctgggagggc atggaggtgc agaccaacag ccccgtcatc
      301 cgggaggccc gccgcgacat tgtggagctg ctgctggaca accatcccaa ggattgccag
      361 acctgcgacc gcgacggcgt ctgcgagctg cagaacctgg cctaccgcat gggcgtccgc
      421 gagcggcact tcgagggcaa acgcaagcag ttccccattg acgacgccgg cgcctccgtg
      481 gtgcgcaacg ccgagaagtg catcctctgc ggccgctgca tccgcgtctg cggcgaggtg
      541 cagggcgtgt tcaacctcag ccagcacggc cgcgggttca ccaccgtggt gggcccggcc
      601 aacctggccc ccatggatga aagcgcctgc atccagtgcg gccagtgcgt gagcgtctgc
      661 cccaccgctg ccttcctgga gcaggatcac accgagcggg tgtggaaggc cctcgggtac
      721 ccgcggacgg agaagcacgt ggtcgtcacc accgctccgg ccatccgggc ggccctcggc
      781 gaagccttcg gcctgcccat gggcacgccg gtcactggga aaatggtcac ggccctgcgc
      841 cgcatgggct tcgacgccat cttcgacgtc aacttcagcg ccgacctcac catcatggaa
      901 gaggcccacg agctgctgaa gcgcctggag ggcggcggcc ccctgcccct cctcacctcc
      961 tgcagccccg gctgggtgag tttcctggag aagttctacc cggaaatgat cccccacatg
     1021 tcgagctgca agagcccgat gcagatgcaa tccaccctca tcaagaccta ctacgccaag
     1081 cagaagggga tggatcccaa agacatctac gtggtctccg tgatgccctg cgtcgccaag
     1141 aagttcgagg cggcgcggcc cgagcacacc ttggacggca tgcccaccac ggacgcggtc
     1201 atcaccaccc gcgagctggc tcagatgatc aagtcctatg gcatcgattt cacccgcctg
     1261 cccgacagcg actttgacca tccgttgggc acatcctcgg gcgcggggga tattttcggc
     1321 gccacgggcg gcgtcatgga ggcggccctg cgcacggcgg ccttcaagct cacgggcaag
     1381 aaccttggca acctggaact gaccgaggtc cggggcgtca cgggggagat ccgtgaggcc
     1441 agcatcagcc tggcgggcaa gaccctgaac gtggctgtgg ccaatggcct gcagaacgcc
     1501 aaggtgctgc tcgacgccgt gaagcgcggc gagaaggact accacctcat cgagatcatg
     1561 gcctgccccg gcggctgcat ctgcggcggc ggccagccct acccacccat cggcacctac
     1621 accatgaacc acgacctcgc ccaggcccgc gccaaggccc tctaccgcat cgattcgggc
     1681 aagaccctgc gctgcagcca tgacaacccc gacatccaga agctctacgc cgactacctg
     1741 ggcgagccct tgggccccac ggcccacgag ctgctccaca cccactacac cgcccgcaca
     1801 cctcggggga tccgatgagc gcctgctgcg cctgcaccac cgacaactgg gccgagctgg
     1861 agcgcggcta ccgcgccatg ctgcccgaat ccatcctcgc gttcatcgac gagaaccgcg
     1921 gccgggagcg gaacgagagc atgctcatcg ccacgctcca catggtgcag gcccacttcg
     1981 gccacctggg gccgggccac ctggaggccg tggcccagct catgcagatc cccctggcga
     2041 aggtcaccgg cgtcgccacc ttctaccact acttccgcct gcagccccgg gggaagtacc
     2101 tcatcaacgt ctgcctcggc accgcctgct acgtgaaggg cgccgaaaag gtggcgcaga
     2161 agctcagcga cgagctgggc atccacttcg gcgagaccag caaggacggc atcttcagcc
     2221 tggaaagcac ccgctgcgtg ggcacctgcg gcttggcgcc ggtggtcatg atcggcgacg
     2281 aagtccatgg ccccctcacc ccaggccagg tccccgccct gctggaaagc tacctcgccc
     2341 gcgccgccga agaactggtc ctgccataaa aaactcacca ccaagacacc aagacaccaa
     2401 gaagagatca aatgcctttc ttggtgtctt ggtgccttgg tggtgatcag ttgtttttcg
     2461 tcccttttct tcagcctgcg gaccgtcccg cccgcatctc cagcgctccg gtgctgaggg
     2521 gcaccagcag ggcgagggcg cccagggcca ccacgccgtg ccagccagcc aggtggtagg
     2581 cgtggccgct gagggtgatg cccgcggcgc cgcccaggta gtagaagagc acgtagaacg
     2641 cgttggcccg gccccggccg gcgctgagct tgcggttcag ggcgcccgcg gccgaggcgt
     2701 gcagggtgaa gaagccggcg cacaccagcc ccagcgccag cgccacggcc cagccttcag
     2761 gaatgagggt caccgccagc cccgcgccca gcacgagggc acccagcacc atggcggtcc
     2821 cgttgccgac gcggttgctc agccttcccg ccagggggcc gatcaccacg cccaccacgt
     2881 aggagaggta gagcagcgtc accgcccggg tggaccagtg gaagggcgcg ccgtggaggt
     2941 agaagggcag gtagttgaac accgacgaga acacgaagaa ggcgccgccg cccacgcagt
     3001 acaggcggaa caggtcgtgg cggaagagca cgtcccggaa ccgcgccggt tcctgggcgg
     3061 cgtggccgtg atcggcctcc ggaggcagcc ccgcgtaggc ggccagggtg gcgcccagca
     3121 gcagggccgc cgcggcgaag aaggcccagc gccagtgggc cgcgggcagc aggaaccctc
     3181 cgagcagacg cccggacagc ccgcccacca ccgtggccga gacataggcc cccatcacca
     3241 cgttcaggcg ctcgtccggc atcacccgcg ccaggtaggc cgccaggcag gtggtgagcg
     3301 aggggatgaa gagcccctgg atgaaccgcg ccgccaccag cagcggcagc gtgggcgcca
     3361 gcgccgccgc cagccccgcg gccgtcacca tcagtccgcc cgcgagcagg atgggccgga
     3421 tgggaaagcg gtccgccagg gcgccgaagg gcaggttcgc caaggcgatg cccagcacca
     3481 ccgccgacac cgtgagcgac gccgccccct cccccacccc gaactgctga cgcagcaccg
     3541 gcagcaccgg ctggggaatg tagaccgtgg tgaacaccgc gctcaccagg gcgaagacca
     3601 gccactggag acgggagagg ggatcgcgaa ccgccatgga accactgtcg aacaggtgcg
     3661 aggaacctgg aaataaaaag ctcaggaaac cacggatgaa cgcgaatgga cacggatggg
     3721 ggccaggcac ggggagcgtt gccgcctgtg cgttacgcct tcggcctcaa cagcgtgggt
     3781 atcatgtggg gagatcccca tcgcatacca gaatggcgtt gttgccggtt ttcatggcct
     3841 cagcctgcaa cgagcttaca tgaatggaag gggcctaggt tccggttcat ctcattaaga
     3901 gtaagccacc catgatccga acaacccttg agaagcgact ccctggtgat tttgaaagac
     3961 aagtcgccat tcgtgaatat ctggagcgtg cgtgcgaagc ttttgtagcc agcggttggg
     4021 ctgatccgaa atttctgact gagttatcat ctcgcgagga gcaaaaattt tgggctagcg
     4081 tttcagaagc gctcgtttat cagcttcttc tcggaaaaac atttggggct cgaaggaacc
     4141 ctgggcgtgg tcctgatttc ttaatccaga atggttctca gagaatttgg attgaggtca
     4201 cttgcccaga gccgacaggc ctccctgaaa actggaaaaa gattgcctgg ggtgaggcct
     4261 cttcagttcc acatgaactc gtattgctcc gctggacgag tgcaatcaag accaaagcca
     4321 atgctctaat tggcaacatg actcgcaaaa aaaccgggta tctgcaaaca ggcatcgttg
     4381 gggctaacga tgcctatgta atcgcagtca acgcgtgctg cctccgacat ggcccattcc
     4441 ctggcatctt aggtatcagc caattcccct acgctgctga agccacctta cctatcggcc
     4501 catatgcatt gcaaattgat agcaaatccc tacaagtagt tgatcgtggg caccaatacc
     4561 gtccgttttt actcaacaaa aacaacgctg aagtttctac caagctattt tttgatccgc
     4621 aatacaacgg gattagcgca atctgggccc tagatcttaa tggctcatca gcgattggca
     4681 atcacgaacc tattgcattg gtacacaacc cgaatgcttt aaacccgctg cctcctggat
     4741 ttcttccaag ccaaaatgag tacgtagtga ccataggtga gaatgaattt ggcgtatcaa
     4801 agcaaccagg cacgctttcg ccagcggcta atccctagct caacctggac tccccctgca
     4861 ttgccaccca cgtctcgaaa cacgtcccgt tccatcgtcc tcatggcctg aacacagccc
     4921 catctgagtt catccgtggc ttcatcccct attcatgaag ccatgcgagc ctcagagctc
     4981 cgacgccatc cggtagaggt cggacgcgga cacgcccaga tgcttggcga ggggtttcac
     5041 ggcttcgcgc tgggtcatgc cgccttcccg ggcggccagc aggaaggtgc gggcccattc
     5101 ggggagggct tcgccgtcga aggcggcgtc cacctcggtc acggtgcgct tggcgctggc
     5161 gccggcgagc accagcacca tctcgccgcg gtcctcacgg cccagctgct gcgagacctg
     5221 ggccggggtg ccgcggtacc aggtttcgtg cagcttggtc agctcccggc ccaaggcgat
     5281 ttcgcggccc ggcaacagct cttccagatc cgacagcgtt tcgtggatgc ggtggggcgt
     5341 ttcgaacacc accaccgtct cctcctcggc gcccagcttc ttgatcatgg tgcgccgcgg
     5401 ttcgctgcgg ttcggcaggt agccgtggaa gccgaaggcg tggcagggca ggcccgaggc
     5461 caccaccgcc agcagcacgg cggaggcgcc gggcagcacg gtgaccttcg ccccggcggc
     5521 ccgggcagcc cgggcgatct caaagcccgg atcgttgatg cccggcatgc ccgcatcgct
     5581 gcagtaggcc accgtgcggc ccgaaagcag ttccagcccc agccgctcga aggccgcgtc
     5641 gcccgcgtgg tcgtcgaagc gcagcagcgg cttgtccatg cccaggtgct tgagcaggcc
     5701 gccggtgcgg cgcgtgtcct cgcaggccac caggtcggcc ccggccaggg cctccctcgc
     5761 gcgatccgtg aggtcgccga ggtttccaat gggggtgggg acaaggatga ggtggccggt
     5821 catgatccat ccagtctggc agccctcgat cggacgcgaa gccgcccttc attcccaccc
     5881 agggtctcgc gtatgatgtc cgccatgcgc cgcctccttg ccaccctccc cctggtcgcc
     5941 ctgatggcct gcgccgtgcc cagccacacg ccgacctaca cccggggcta cccgggcctg
     6001 aagggcgtca tgaaccacct gccggacggc cgctggcagt tcgtgatgga gctgcccaac
     6061 cctgagaagc ggcacacgtt ccgcctggaa tccacggaag ccctggacat ccgcatggac
     6121 ctcgccgagc ccaagagctg ggccacctgg gtcgtggacg cggcgcgggt ggaggacggg
     6181 aagcccttcc agatgaagct ctgggcggac ggtgacgact tcccgctcct ggtccagtac
     6241 cccaagggcg gccgggacta cggtcgggag ggggtcagcg ccctcatcac cctgagcatc
     6301 ctgccccggc gctgagccct gaggcgggcc tcacgtcacc cgctcgagct gccgctcgct
     6361 gcggatcagg cggctgtagg ccatgcccgt gtgataccag tgcagcagga aggcctcctg
     6421 gcaggcgcgc cgccaggccg gaaaggtgcc gaggggcggt gggcaaccct gggccggaca
     6481 gcaccggacc tccaggttca ggccccgggc ggtggcccgg gcccgggtga ggtgcagggg
     6541 gtcggagacc agcaggaggg tgtgccagcc ttcagcccgc atgtgggacc tcacgttgaa
     6601 gaggttctcc agggtgtgct ggctgcggtc ctccaggagg accacggccc tgggcacgcc
     6661 ctgggccacc agccagtccc ggcccgcctc ggcttcgctg cggctggacg cccccgtggc
     6721 gccccccgcc acgaagatcc gcggcgccag gccgcgcttc cacaggtcca gcgcgtggcc
     6781 caaccgcgcc acgaagaccg gcgtcagctc atcgcgctcc agccgtcggc ccagcacgag
     6841 gatcgcgtcc gcgggggcgg cctcgtcccc tcgcacaccc tgcaggacct gccgcaagcg
     6901 gaagagcacc ggcagaccc
//
LOCUS       DATGWW010000111         4044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_320708, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000111 DATGWW010000000
VERSION     DATGWW010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4044
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320708"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..505)
                     /gene="cydB"
                     /locus_tag="VK150_01625"
     CDS             complement(<1..505)
                     /gene="cydB"
                     /locus_tag="VK150_01625"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016682 - oxidoreductase activity, acting
                     on diphenols and related substances as donors, oxygen as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HLP30028.1"
                     /translation="MHELWFWLVSVMVAIYVVMDGFDFGAGILHLVVAKTNEERREVL
                     GAIGPLWDGNEVWLLAGGGSLFLAFPKVLASGFSGFYLAMFLVLWTLLLRGISIEFRS
                     HLHDGMWRSFWDGTFAFASILLPVLFGAALGNVLRGVPMNQAGEFNIPLFTHFGTANP
                     VGILDWYT"
     gene            complement(515..1843)
                     /locus_tag="VK150_01630"
     CDS             complement(515..1843)
                     /locus_tag="VK150_01630"
                     /inference="COORDINATES: protein motif:HMM:NF013791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HLP30029.1"
                     /translation="MGDPLFWHRLQFGFTATYHYLFPQLTMGLAFLIVVLKALGLKTG
                     EARYNDAARFWIRIFGINFAVGVVTGIPLEFQFGTNWAKFSHISGGIIGQTLGMEGMF
                     AFFLESSFLGMLIWGEKKLSPKGHFGAALALWLGSWLSGYFIIATNAFMQHPVGYVMA
                     PDGTLQLTSFWAFLLNPWALGQYAHNMIAAVVTGSFVVAAIGAFWTLKGIHAEQARLN
                     LRVGTIAGLIFSVLVAFPTGDLQGKLVAKHQPITLAAMEGRFESGPRAGLTLIGQPNV
                     AKRKIENPIQVPAVLSFIAYGTFSSNVKGLLEFPEDQWPQNIELLYYSFHIMAGLGTL
                     MIALMGLAVLLLWKGRLDGNRPVLWALMLAFPFPYIATTAGWAVAEFGRQPWLIYGVF
                     RTAQGGSPTVHAGHTAFTTLGFAGIFVVLSMLFLYLIGREIAHGPASHKA"
     gene            complement(2027..2443)
                     /locus_tag="VK150_01635"
     CDS             complement(2027..2443)
                     /locus_tag="VK150_01635"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HLP30030.1"
                     /translation="MSFDASVTWDSGLAFQVRQDGHQYLIDASPEAGGADRGPRPKAL
                     LLSGLGGCTAIDVISILGKMRVPLDGLEVQVSAESREEHPRIFTGIHVRYVFRGKDLP
                     MDKLERAVKLSEETYCGVSAMLRPAVPITSEIVVKE"
     gene            complement(2476..2835)
                     /locus_tag="VK150_01640"
     CDS             complement(2476..2835)
                     /locus_tag="VK150_01640"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HLP30031.1"
                     /translation="MSFFLEHWIYLIPLAAVGFLWWSRRSASAADVQAMLSRGAQVVD
                     VRTPAEFRAGAHPKAVNIPLDQLEARAKELDPARPVLVCCETGSRSGFGVSVLKRAGF
                     SDVANLGSWRRIQSLLG"
     gene            complement(2892..3074)
                     /locus_tag="VK150_01645"
     CDS             complement(2892..3074)
                     /locus_tag="VK150_01645"
                     /inference="COORDINATES: protein motif:HMM:NF039355.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6132 family protein"
                     /protein_id="HLP30032.1"
                     /translation="MLAVKGTALRLALGLVVGGLLGYGWHRLVGCSTGACPLTATPLR
                     GIGYGAVMGLIWALAR"
     gene            complement(3062..3274)
                     /locus_tag="VK150_01650"
     CDS             complement(3062..3274)
                     /locus_tag="VK150_01650"
                     /inference="COORDINATES: protein motif:HMM:NF022577.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2892 domain-containing protein"
                     /protein_id="HLP30033.1"
                     /translation="MNVDRIVHIVAGTFILLSLALAKFHSPNWLWFTAFVGANLLQSG
                     LTNWCLMSTILRKLGVPEGPGVGCSR"
     gene            complement(3278..>4044)
                     /locus_tag="VK150_01655"
     CDS             complement(3278..>4044)
                     /locus_tag="VK150_01655"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLP30034.1"
                     /translation="EGVEEPAIHHKNLMPVTYVFSDLAGAIESPVYALAALNKKIDAM
                     KGTAGAEVPRLGLAHPENTESLSLKWDGEWHITLEVFRDLGMAFAAVLVLIFVLVVGW
                     FESFEIPWVILVPIPLSLIGIIPAHGLMRAFFTATSMIGFIAGAGIIVRNSIILVDFI
                     ELKLREGMSLESAVEEAGVVRFRPMLLTASAVLVGSAVMLADPIFQGLAISLMAGEVA
                     ATLLSRLAVPVLYYLVARRGHAANLQREAAMTAEQE"
BASE COUNT          762 a         1324 c         1367 g          591 t
ORIGIN      
        1 ccgtgtacca gtccaggatc cccacggggt tggcggtccc gaagtgggtg aagaggggaa
       61 tgttgaattc tcccgcctgg ttcatgggca ccccgcggag cacattgccc agcgccgcgc
      121 cgaacagcac cggaagcagg atgctggcga aggcgaaggt gccgtcccag aaggaacgcc
      181 acatcccgtc gtggagatga ctccggaact cgatggagat ccctcggagg agcagcgtcc
      241 acaggaccag gaacatcgcc aggtagaagc cggagaagcc ggaggccagc accttcggga
      301 aggccaggaa cagcgagccg ccgccggcca gcagccacac ctcgttgcca tcccacaggg
      361 gaccgatggc gcccagcacc tcgcggcgct cctcgttggt cttcgccacc accaggtgga
      421 ggatccccgc accgaaatcg aagccgtcca tcaccacgta gatggccacc atcactgaga
      481 ccagccagaa ccagagctca tgcatggcag cctcctaggc tttgtgcgac gcggggccgt
      541 gggcgatctc gcggccgatc aggtagagga acagcatgct aagcaccacg aagatgcccg
      601 caaagccgag tgtggtgaag gcggtgtggc ccgcgtgcac cgtgggcgag ccgccctgcg
      661 ccgtgcggaa cacgccatag atgagccagg gctggcggcc gaactcggcc accgcccagc
      721 cggcggtggt ggcgatgtag gggaagggga aggccagcat cagggcccag agcacggggc
      781 ggttgccgtc cagccgcccc ttccacagca gcaggacggc caggcccatc agcgcgatca
      841 tcagcgtgcc gagccccgcc atgatgtgga agctgtagta gagcagttcg atgttctggg
      901 gccactgatc ctcggggaac tcgagcaggc ccttcacgtt gctggagaag gtgccgtagg
      961 cgatgaagct cagcaccgcg ggcacctgga tggggttctc gatcttgcgc ttggcgacat
     1021 tgggctggcc gatgagcgtc aggcccgcgc gcggtccact ttcaaaccga ccctccatgg
     1081 ccgccagggt gatgggctgg tgcttcgcca cgagcttgcc ctgcaggtca ccggtgggga
     1141 aggccaccag cacgctgaag atcaatcccg cgatggtgcc gacccggagg ttcagcctcg
     1201 cctgctccgc gtggatgccc ttgagcgtcc agaaggcgcc gatggcggcc accacgaacg
     1261 atcccgtcac caccgcggcg atcatgttgt gggcgtactg acctagggcc cagggattga
     1321 gcaggaaggc ccagaagctc gtgagctgca gggtgccgtc cggcgccatc acgtagccca
     1381 ccggatgctg catgaaggcg ttggtggcga tgatgaagta ccccgagagc cagcttccga
     1441 gccacagcgc cagcgccgcg ccgaaatgcc ctttgggtga gagcttcttc tcgccccaga
     1501 tcagcatccc gaggaagctg ctctccagga agaaggcgaa catgccctcc atgcccagcg
     1561 tctggccgat gatgccgccc gatatgtggg agaacttcgc ccagttcgtg ccgaactgga
     1621 attccagcgg gatgcccgtc accacgccca ccgcgaagtt gatgccgaag atgcggatcc
     1681 agaaccgcgc cgcgtcgttg tagcgggcct cgccggtctt caggccgagg gccttgagca
     1741 ccacgatgag gaaggccagg cccatggtca gctgggggaa caggtagtga taggtggccg
     1801 tgaatccgaa ctgcagcctg tgccagaaca gtggatcgcc catagtgcct ccggccgcgt
     1861 cgtcccatag ctgacggcgg gcatccagta tttcacgcca aggcccgatc atgcctgcga
     1921 cttctcgccg caagccatga aacgagggag cctattcgcg gacccggagg tcgcgggaag
     1981 ggtcatcccc gcagtgcgct ggccggttca gacgcgatcc ggccgcctat tccttgacga
     2041 cgatctccga cgtgatcggc acggcgggtc gcagcatcgc ggagacgccg caataggtct
     2101 cttcggaaag cttcacggcc cgttccagct tgtccatggg cagatccttg ccccggaaga
     2161 cgtagcgcac atggatcccc gtgaagatcc gcgggtgctc ctcccgggac tcggcgctca
     2221 cctggacttc gagcccgtcg aggggcacgc gcatcttgcc gaggatgctg atcacgtcga
     2281 tggccgtgca gccgcccaga cccgagagca gcagggcctt gggccgcggc ccgcggtccg
     2341 cgccgcccgc ctcggggctg gcgtcaatca ggtactgatg cccatcctgc cggacctgga
     2401 aggccagacc ggaatcccag gtcaccgaag catcaaacga catcgaggaa ctcccaagga
     2461 aaggggggaa gacgctcagc cgagcaggct ctggatgcgc cgccaggagc ccaggttggc
     2521 cacgtcggaa aagcccgccc gcttcaggac ggacacgccg aagccgctgc ggctgcccgt
     2581 ctcgcagcac accagcaccg gccgggccgg atccagttcc ttggcgcggg cctccaactg
     2641 atccagggga atgttcacgg ccttggggtg ggcgccggcc cggaattcgg ccggggtgcg
     2701 cacatccacc acctgcgcgc cccgggagag catcgcctgc acatccgccg ccgaggcgga
     2761 ccggcggctc caccacagga agcccacggc agccagggga atcaggtaga tccagtgttc
     2821 caggaagaag gacatggcga ctccgacaag gtgtggcgga cacagaggat catgcctgat
     2881 ccggggtggt cctagcgggc cagggcccag atgaggccca tgacggcgcc gtagccgatg
     2941 ccgcgcaagg gcgtggcggt gagggggcag gcgcccgtgc tgcaccccac caggcggtgc
     3001 cagccgtagc ccagcaggcc cccgaccacg aggccgaggg ccaggcggag ggcggtgccc
     3061 ttcaccgcga gcatccgacc cccgggcctt cgggcacgcc cagcttgcgg aggatggtcg
     3121 acatcaggca ccagttggtg agcccgctct gcagcaggtt cgcgcccacg aaggcggtga
     3181 accagagcca gttggggctg tggaacttcg ccagggcgag gctcagcagg atgaaagtgc
     3241 ctgcgacgat gtgcacgatg cggtcgacgt tcatagctta ctcctgttca gcggtcatcg
     3301 ccgcttcgcg ttgcaggttg gccgcgtggc cccggcgggc cacgaggtag tagaggacgg
     3361 gaacggccag gcgggacagc agggtggcgg cgacttcacc ggccatgagg ctgatggcga
     3421 ggccctggaa gatgggatcg gccagcatca cggcgctgcc caccagcaca gccgaggccg
     3481 tgagcagcat gggccggaag cgcaccacgc ccgcctcctc caccgcggat tcgagggaca
     3541 tgccctcccg cagcttgagc tcgatgaagt ccaccaggat gatgctgttc cgaacgatga
     3601 tgccggcccc ggcgatgaag ccgatcatgc tggtggccgt gaagaaggcc ctcatcaggc
     3661 cgtgcgccgg gatgatgccg atgagcgaga gcggaatcgg caccaggatc acccagggga
     3721 tctcgaagct ttcgaaccag cccaccacca gcacgaagat cagcaccagc accgccgcga
     3781 aggccatgcc caggtcccgg aacacctcga gggtgatgtg ccactcgccg tcccacttga
     3841 gcgacagcga ttcggtgttc tcggggtggg ccaggcccag gcgcggcacc tcggcgccgg
     3901 ccgtcccctt catggcgtcg atcttcttgt tgagggccgc cagggcgtag accgggcttt
     3961 cgatggcccc ggcgagatcc gagaacacgt aggtcacggg catgaggttc ttgtggtgga
     4021 tggccggttc ctcgactccc tctt
//
LOCUS       DATGWW010000112         2388 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_235183, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000112 DATGWW010000000
VERSION     DATGWW010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235183"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VK150_01660"
     CDS             <1..299
                     /locus_tag="VK150_01660"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HLP30035.1"
                     /translation="EMGMGGVYLELVPHERIVATEVFDQPWYPGQAVDTTTLEEAGGV
                     TTLTTSVRYDSKEIRDAVLKSPMDQGMALGFDRLERVLAALPAEGGMAAAQDQG"
     gene            312..773
                     /locus_tag="VK150_01665"
     CDS             312..773
                     /locus_tag="VK150_01665"
                     /inference="COORDINATES: protein motif:HMM:NF018663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLP30036.1"
                     /translation="MGKVTPFLMFNDQLEAAIAFYTATFPDSHVKELSRAGQDGPVTA
                     AQFVVGGQTFMGYNGGPYFTFSQGFSLFVDCEDQAEVDRYWDKLVGAGATPSQCGWIT
                     DPFGVTWQIVPRRFMELIADKNPRKVQAVMAAMMEMVKLDVAALEKAYDDA"
     gene            complement(770..1645)
                     /locus_tag="VK150_01670"
     CDS             complement(770..1645)
                     /locus_tag="VK150_01670"
                     /inference="COORDINATES: protein motif:HMM:TIGR02757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HLP30037.1"
                     /translation="MKTSPAALKARLDGLCDRYDHAGALDLDPLSVPLTYPDPLDREL
                     TAFVAAHLAYGRVEPMIRAVKAALLPLGPRPAAWLRGRSPAEARKALLRALADWAWRF
                     HTGPDLAAWLLAWKRLDQESGRGLESHLLPQGDESPDAALSRLVQRLRRELPPSYGTR
                     FSLPDPLEGAACKRWRMFLRWMVRTGWPDLGLWERYPAGALIIPLDTHVARVSRFIGL
                     SRRATPDGKMALEITEALRGLDAADPLRYDFALSHLGILGDCPGVRKRSTCAACPLYS
                     VCQAGVKTSARIPGA"
     gene            1789..2199
                     /locus_tag="VK150_01675"
     CDS             1789..2199
                     /locus_tag="VK150_01675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30038.1"
                     /translation="MNLRGLGNLAKILEEAAKPDSVLREDREKPKPKVLKKGEKAGNI
                     RVMDPKRKVWYEKRLKEITAKATAPEAPASGPVSAPLSTPAVPAAPALAKSVASKLGG
                     SLMQTLAAAKDAKPKAEGQKRSEAWRRKPGESIF"
BASE COUNT          399 a          794 c          851 g          344 t
ORIGIN      
        1 ccgagatggg catgggcggc gtgtacctgg agcttgtccc ccatgaaagg atcgtcgcca
       61 cggaggtctt cgatcagccg tggtatccgg gccaggccgt ggataccacc acgctggagg
      121 aagcgggtgg tgtcaccacc ctcaccacct cggtgcgcta tgactccaag gagatccgcg
      181 acgcggtgct aaagtccccc atggaccagg gcatggccct gggattcgat cgcctcgagc
      241 gggtactggc ggctctgccc gccgagggcg ggatggccgc ggcgcaggac cagggctgag
      301 cggaggcgac catgggcaaa gtgacccctt tcctgatgtt caatgatcag ctcgaagccg
      361 cgatcgcctt ctacaccgcg accttcccgg actcccacgt gaaggaattg tcccgcgcgg
      421 gccaggacgg ccccgtcacc gctgcccagt tcgtggtggg cggccagacc ttcatgggct
      481 acaacggggg cccctacttc acgttctccc aaggcttctc gctcttcgtg gattgcgaag
      541 accaggcgga ggtggaccgc tactgggaca agctggtcgg cgcgggagcc acgccctccc
      601 agtgcgggtg gatcaccgat cccttcggcg tcacctggca gatcgtcccc cggcggttca
      661 tggaactcat cgccgacaag aaccccagga aggtccaggc cgtcatggcg gccatgatgg
      721 agatggtgaa gctggacgtg gccgcgctgg agaaggccta tgacgacgct taggcccccg
      781 gtatccgcgc cgatgtcttg actccagcct ggcacaccga atagagcggg caggccgcgc
      841 aggtgctgcg cttccgcacc ccggggcagt cgcccaggat gcccaggtgg ctgagggcga
      901 agtcgtagcg caggggatcg gcggcatcca ggccgcgcag ggcttcggtg atctccagag
      961 ccatcttccc gtccggcgtg gcccggcggc tgaggccgat gaagcgcgac acccgcgcca
     1021 cgtgggtgtc gagggggatg atcagtgccc cggccgggta gcgctcccag aggcccaggt
     1081 cgggccagcc ggtgcgcacc atccagcgga ggaacatgcg ccagcgcttg caggcggcgc
     1141 cttccagggg atcgggcagg gagaatcggg tgccgtagct gggcggcagc tcccggcgca
     1201 ggcgctgcac caggcgggag agcgccgcgt cggggctttc gtccccctgg ggcaggaggt
     1261 gggactccag gccgcgtccg ctctcctggt cgaggcgctt ccaggccaac agccaggccg
     1321 cgagatcggg cccggtgtgg aagcgccagg cccagtccgc cagggcgcgg agcagggcct
     1381 tgcgcgcctc cgcgggagag cgcccccgca gccaggcggc ggggcggggt cccaggggga
     1441 ggagggccgc cttcacggcg cggatcatgg gctccacccg gccgtaggcg aggtgggcgg
     1501 cgacgaaggc ggtcagctcg cggtccaggg gatcggggta ggtcaggggc acggacaggg
     1561 ggtccaggtc cagggccccg gcgtggtcat agcggtcgca gagcccgtcc aggcgggcct
     1621 tcagggcggc gggcgaggtt ttcatggggt ccagtgtccc aggctccgcg atccggcccg
     1681 ggcgaaaaat ccgcgcctcg tgcttaaaat cactatgtaa gcaaagggat tgccgataac
     1741 cttgtcagtg gtggcccgtg gccccttctg gagcaataac cgcacatgat gaacctgcgt
     1801 ggcctaggca acctggcgaa gatccttgaa gaagctgcaa agcccgattc cgtgttgcgg
     1861 gaagaccgcg agaagcccaa gcccaaggtc ctcaagaagg gtgagaaagc cggcaacatc
     1921 cgcgtgatgg atcccaagcg gaaggtctgg tacgaaaagc ggctgaagga gatcaccgcc
     1981 aaggcgaccg cgcccgaggc tcccgcctcc ggtcccgtca gcgccccgct cagcaccccg
     2041 gcggtgcccg cggctccggc cctggccaag tccgtggctt ccaagctcgg cggctccctg
     2101 atgcagaccc tcgccgccgc caaggacgcg aagcccaagg ccgaaggcca gaagcgctcc
     2161 gaagcctggc gccgcaagcc cggcgaatcc atcttctagc ccgcctcagc tcggcgctgc
     2221 tgattcaggc cccggtttct gccggggcct gaatcttgta cttgcggccg atccaggtgg
     2281 cggccagggg gcgctcgaag cggccttggc gcagctcgcc cacgctcagg aggcccaggt
     2341 ccagcacggg ggtcgcgcca tccagggtgc catccgccag ccgggcct
//
LOCUS       DATGWW010000113         1938 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_416123, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000113 DATGWW010000000
VERSION     DATGWW010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416123"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1029
                     /locus_tag="VK150_01680"
     CDS             <1..1029
                     /locus_tag="VK150_01680"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HLP30039.1"
                     /translation="ESPRPDGGHLVKPERLQVVLEAIRDAGERGITKAGLVRKLGGVA
                     MRTVDRAVQLLEDQGARFGKLREGRPAVIHFTLEKAPDWDSRITPHARMALEVALMAL
                     EGTATELWYDQLEGLRTLADSHLSTRDRDLFRALQEHVCVRGGADDQQALDTRTLTQV
                     LLALGHPEGPRELELTYAAASTGRTSARTVVPFTLTHDVFSGGAFLLAWDAAKQEPRH
                     FRLARIVEAKALPKRGLIPDKRPLEQARELQIGGWFRLEAPMRVQVRVSGTNWPQALL
                     DAPPALPGVEVRKEKGGTVLLSFQATELSGPTRYVLQFGADAEVLEPKALRTHLAATL
                     KAMAARYR"
     gene            complement(1033..1623)
                     /locus_tag="VK150_01685"
     CDS             complement(1033..1623)
                     /locus_tag="VK150_01685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30040.1"
                     /translation="MPTPLPAPALLRLISEGRLFKQSFAWLLRLLSVAALVEGVWVSI
                     ELWRGGGTSTQAVFGQLIFQSALVLAAYLVAHLAWLRAQDVAAMPQTGGEVIIPLSRL
                     LLRLAGELYASLMVALGAGGAVMVWISAGDARVDQALLRLLLPGFGGDPFPAGLNLLL
                     TGLGWGALSLLAGYLASELLGLLCAIESNTRSVKLD"
     gene            complement(1744..>1938)
                     /locus_tag="VK150_01690"
     CDS             complement(1744..>1938)
                     /locus_tag="VK150_01690"
                     /inference="COORDINATES: protein motif:HMM:NF014398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0042279 - nitrite reductase (cytochrome,
                     ammonia-forming) activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HLP30041.1"
                     /translation="DAKLKPIYELQRKAQWRVDFVNAENSMGFHAPQEAARILGEAID
                     FGRQGQVALRDLGAGKVAKK"
BASE COUNT          307 a          712 c          683 g          236 t
ORIGIN      
        1 gaatcccccc gccccgacgg cggccacctc gtgaagcccg agcggctcca ggtggtgttg
       61 gaggccatcc gcgacgccgg ggagcggggg atcaccaagg ccgggctcgt ccgcaaactg
      121 ggcggcgtcg ccatgcgcac cgtggaccgc gccgtacagc tgctggagga ccagggcgcc
      181 cggttcggca agctgcggga aggccggccg gcggtgatcc acttcaccct ggagaaggcc
      241 ccggactggg acagccgcat caccccccac gcccgcatgg cgctggaggt ggcgctcatg
      301 gccctcgaag gcaccgccac ggagctctgg tacgaccagc tggagggact ccgcaccctg
      361 gcggacagcc acctcagcac ccgcgaccgc gacctcttcc gcgccctgca ggagcacgtc
      421 tgcgtgcgcg gcggcgccga cgatcagcag gccctcgaca cgcggacgct cacccaggtg
      481 ctcctcgcgc tcggccatcc cgaaggcccc cgcgagctgg agctcaccta tgccgcagcc
      541 tccacgggcc gcaccagcgc ccgcaccgtg gtgcccttca cgctcaccca cgatgtcttt
      601 tccggcgggg ccttcctgct ggcctgggac gccgccaagc aggagccccg gcacttccgc
      661 ctggcccgca tcgtcgaggc gaaggccctg ccgaagcgcg ggctgatccc cgacaaacgc
      721 cccctggagc aggcccggga gctgcagatc ggcggctggt tccggctgga ggccccgatg
      781 cgggtccagg tgcgggtctc gggcaccaac tggccccagg ccctgctgga cgcccccccc
      841 gccctgcccg gggtggaggt gcgcaaggaa aagggcggca ccgtgctgct gagcttccag
      901 gccacggagc tctccggacc cacgcggtac gtgctgcagt tcggcgcgga cgcggaggtg
      961 ctcgagccca aagcgctgcg cacccacctc gccgccaccc tgaaggccat ggcggcccgg
     1021 taccgctgaa cgtcagtcca gcttgacgct ccgcgtgttg ctctcgatgg cgcagagcag
     1081 ccccagcagc tcggaggcca ggtagcccgc cagcaggctc agcgcccccc agcccagccc
     1141 cgtgaggagc aggttgaggc ccgcggggaa aggatcgccg ccgaaacccg gcagcaggag
     1201 gcgcaacagg gcctgatcca cccgcgcgtc gcctgcgctg atccagacca tgaccgcccc
     1261 gccggcgccc agcgccacca tgaggctggc gtagagctcg cccgccaggc gcaggagcag
     1321 gcgggagagg ggaatgatca cctcgccgcc ggtctgcggc atcgcggcca catcctgggc
     1381 ccgcagccag gcgaggtggg ccaccaggta ggcggccagg accagggccg actggaagat
     1441 cagctggccg aacacggcct gggtgctggt gcccccgccg cgccagagtt cgatggacac
     1501 ccagacgccc tcgaccaggg ccgccacact gagaagccgc agcagccacg cgaacgactg
     1561 tttgaagagc cggccttcgg aaatcaggcg cagcagggcc ggggcgggga gcggggtggg
     1621 catgggggcc tccggtgggc gtgatggtct ccagcctcga cagaccggag gctcccgtca
     1681 agcacggaac gaaaagaggg gccggcgatg ccggcccctc tcaggtggat caacgggtcg
     1741 gggctacttc ttggcgactt tgccggcgcc caggtcgcgg agcgccacct ggccctggcg
     1801 gccgaagtcg atggcctcgc cgaggatgcg cgcggcctcc tggggggcgt ggaagcccat
     1861 ggagttctcg gcgttgacga aatccacgcg ccactgggcc ttgcgctgca gctcatagat
     1921 gggcttgagc ttcgcgtc
//
LOCUS       DATGWW010000114         1507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_280058, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000114 DATGWW010000000
VERSION     DATGWW010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280058"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            13..>1507
                     /gene="asnB"
                     /locus_tag="VK150_01695"
     CDS             13..>1507
                     /gene="asnB"
                     /locus_tag="VK150_01695"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HLP30042.1"
                     /translation="MFAFAVWDRQLGTLTLGRDRMGEKPLYYGWQGQGQEAAFLFGSE
                     LKALRVHPAFEGRVNRDAMTLFLRHNYIPAPHSIYEGIAKLEPGCLLELSLEQPEPRI
                     RPYWSFREVALEGYRNPFQGSEAEAVDALEALLAKAVGQQMVADVPLGAFLSGGVDSS
                     TVVALMQAQSTRPVKTFTIGFHEQGFNEAEHALAVARHLGTDHTELYVSGSDALAVIP
                     KLPTLYDEPFSDSSQIPTHLVAGLARQHVTVSLSGDAGDELFAGYNRYAFAHRLWRRL
                     DKVPQGLRRGLGRGLQRISPEGWNRGLAHVGGLLPSSLKMANPGDKIHKGAEVLASPS
                     LDALYLGLLSHWKHPATLVKGATEPKTVLSGLASGFDGLDGISRMMALDALTYLPDDI
                     LAKVDRAAMGVSLESRVPMLDHRVVAFAWTLPLAMKLRGGVTKWPLRQVLYRHVPKAL
                     IERPKMGFGVPIDAWLRGPLKDWAEDLLSPDRLGREGYFDVAPIRQAW"
BASE COUNT          234 a          508 c          503 g          262 t
ORIGIN      
        1 aaggccgtcg gcatgttcgc gttcgcggtc tgggaccggc agctggggac gctgaccctg
       61 ggcagggacc gcatgggcga gaagccgctc tactacggct ggcagggaca gggccaggaa
      121 gctgccttcc tgttcggttc ggaattgaag gccctgcggg tccatccggc cttcgaaggc
      181 cgcgtaaacc gcgacgccat gaccctcttc ctgcgccaca actacatccc ggcgccccat
      241 tccatctacg agggcattgc caagctggaa ccggggtgct tgctggagtt gtccctggaa
      301 caacccgagc cccgcatccg cccctactgg tctttccggg aggtggccct ggagggctac
      361 cggaatccgt tccagggcag tgaggccgag gctgtggacg ccctagaggc cttgctcgcc
      421 aaggccgtgg gccagcagat ggtcgcggat gtgcccctgg gggccttcct gtcgggcggg
      481 gtggattcct ccacggtggt cgccctgatg caggcccagt ccacacgacc ggtcaagacc
      541 ttcaccatcg ggttccatga gcagggcttc aacgaggccg aacacgcctt ggcagtggcc
      601 cgccacctgg ggacggatca caccgagctc tacgtcagcg gcagtgacgc gctggcggtg
      661 attcccaagc tgccgaccct ctacgacgag cccttctcgg attcctccca gatccccacg
      721 cacctcgtgg cgggcctggc ccggcagcac gtgactgtct ccctttccgg ggatgcgggc
      781 gacgagctgt ttgccggcta caaccgctat gccttcgccc accgcctatg gcggcgcctg
      841 gacaaggtcc cccagggact gcggcgcggc ctggggcggg gcctccagcg gatctccccc
      901 gaaggatgga accggggact tgcgcatgtg ggcgggctgc ttccctcctc gttgaagatg
      961 gccaaccccg gggacaagat ccacaagggg gcggaggtac tggccagccc gagcctggat
     1021 gccctgtacc tggggctgct gtcccattgg aaacacccgg caaccctggt gaagggggcc
     1081 accgagccca agacggtgct ctccggcctg gcatctggct tcgacggcct ggacggcatt
     1141 tcacggatga tggccctgga cgccctgacc tatctgcccg atgacatcct ggccaaggtg
     1201 gaccgggcgg ccatgggggt ttccctggag tcgcgggtgc cgatgctcga ccatcgggtg
     1261 gtcgcctttg cctggaccct ccccctggcc atgaaactgc gggggggcgt caccaaatgg
     1321 ccgctccggc aggtgctcta ccggcacgtt cccaaggcct tgatcgagcg gcccaagatg
     1381 ggcttcggtg ttcccatcga cgcctggctg cgggggcctc tgaaggactg ggccgaagac
     1441 ctgctctccc ctgatcgcct tggcagggaa gggtacttcg atgtcgcgcc catccgacag
     1501 gcctggg
//
LOCUS       DATGWW010000115         1824 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_235340, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000115 DATGWW010000000
VERSION     DATGWW010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235340"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..443
                     /locus_tag="VK150_01700"
     CDS             <1..443
                     /locus_tag="VK150_01700"
                     /inference="COORDINATES: protein motif:HMM:NF019000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="host-nuclease inhibitor Gam family protein"
                     /protein_id="HLP30043.1"
                     /translation="VARADALLQMLGETTAELSAAVAKMMEEIKAVEESWRADLEILG
                     QQQQSLEAEVVSLAKMNRDSLFSGDSDRLDLPHGALLFEVQRRVKRGRGVLEQLKERG
                     FLEAVKVSESVDWDQLEDWPDEKLFFVGTERVRKELFSYEVKPQ"
     gene            489..641
                     /locus_tag="VK150_01705"
     CDS             489..641
                     /locus_tag="VK150_01705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30044.1"
                     /translation="MPELEAVDWEALALAEVALNCPRPARGDCLGEDCLAWEACRAGR
                     QNQEVI"
     gene            638..1063
                     /locus_tag="VK150_01710"
     CDS             638..1063
                     /locus_tag="VK150_01710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HLP30045.1"
                     /translation="MSEKKRWKVFGGAVKSPCPGCGDWGQEGFPECAETCEPMRNYRV
                     YQGLPTEASEKPRTIQATGMAKNLFPTKNPEEFVPLTAEILDFLRREKEERGLTYGQL
                     SERLSLSVPRLANILSGKPKLIRIDAMKNIRDYREAHLS"
     gene            1044..1616
                     /locus_tag="VK150_01715"
     CDS             1044..1616
                     /locus_tag="VK150_01715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30046.1"
                     /translation="MKLTCPSCGAVIDFDQAARGTEGEALAKAAALFGADWELASEYV
                     DAFRQRRDAALALKKRLRLLREVWEIWRSGQFDYDGQVYQVGKDEIRAALAQVANREL
                     QGLKNHNYLKQILKASAREFGKQQEEARREREHRLQAGRRDVGADPSVCPPAEVDPEI
                     PRLVSQSLFGKTEAARQAAKDRLAALGVKK"
     gene            1613..>1824
                     /locus_tag="VK150_01720"
     CDS             1613..>1824
                     /locus_tag="VK150_01720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30047.1"
                     /translation="MIELFQCQALKARISKRQCRINQEQARLRSTPAGQRQCWNGRGG
                     YIGPLHFCLECTQPEALEAKRLEAPGR"
BASE COUNT          369 a          517 c          687 g          251 t
ORIGIN      
        1 aggtggcccg ggcggacgcc ctgctgcaga tgctgggcga aacgaccgcg gaactgagcg
       61 ccgccgtcgc taaaatgatg gaggaaatca aggcggtgga ggagtcctgg cgggccgacc
      121 tggagatttt ggggcagcag cagcagagcc tggaggcaga agtcgtcagc ctggcgaaga
      181 tgaatcggga cagcctgttt tccggcgact ccgaccggct ggacctgccg cacggcgccc
      241 tgctcttcga ggtgcagcgc cgggtgaagc ggggccgggg ggtgctggag cagctcaagg
      301 agcggggctt cctggaggca gtgaaagtat cggagtcggt ggactgggat cagttggagg
      361 actggccgga cgagaagctc ttcttcgtgg gcaccgagcg ggtgcggaag gaattgttca
      421 gctacgaggt gaaaccgcag taggcagagg gcagtaggca gaaggcagaa aaagcaaagg
      481 agaggaaaat gccggaattg gaagctgttg actgggaggc gctggcgctg gcggaagtgg
      541 cgctgaactg cccgaggccg gcccggggcg actgcctggg cgaggactgc ctggcctggg
      601 aagcctgccg ggcggggcgg cagaatcagg aggtgatatg agcgagaaga aaaggtggaa
      661 agttttcggg ggcgcggtga aatcgccgtg cccgggctgc ggcgactggg ggcaggaggg
      721 cttcccggag tgcgctgaga cctgtgagcc gatgcgaaac tatagagtat accagggttt
      781 gccgaccgaa gcaagcgaaa aaccccggac gatccaggcg accggcatgg ccaagaatct
      841 cttccccacc aaaaacccgg aggaattcgt gcctttgacc gccgagatcc tggacttcct
      901 gcgccgggaa aaggaggagc ggggcctgac ctacgggcaa ttaagcgagc ggctcagcct
      961 gtccgtcccc cgcctggcca acatcctgtc ggggaaaccg aagctgatcc gcatcgacgc
     1021 catgaaaaat atccgggact accgtgaagc tcacctgtcc tagctgcggc gccgtcatcg
     1081 atttcgacca ggcagcccgg ggcaccgaag gcgaggccct ggccaaggcc gcggccctgt
     1141 tcggggcgga ctgggagctg gcgagcgaat acgtggacgc cttccgccag cgccgggacg
     1201 cggccctggc cctgaagaag cgcctgcgcc tgctccggga ggtctgggaa atctggcgct
     1261 ccggccagtt cgactacgac ggccaggtct accaggtggg caaggacgag atccgggcgg
     1321 ccctggccca ggtggccaac cgggagctcc aggggttgaa gaatcacaac tatctcaagc
     1381 agattttgaa ggcctcggcc cgggagttcg gcaaacagca ggaggaggcc cggcgggagc
     1441 gggagcaccg cctgcaggcg gggcggcggg acgtaggggc agacccgagt gtctgcccgc
     1501 cggcagaggt cgatccggag atcccccggc tggtgagcca gtcgctcttc ggcaaaaccg
     1561 aggcggcgcg ccaggcggcc aaggaccggc tggcggccct gggggtgaaa aagtgatcga
     1621 gctcttccag tgccaggccc tgaaggcccg gatctccaag cggcagtgcc gcatcaacca
     1681 ggagcaggcc cggcttcgga gcaccccggc agggcagaga cagtgctgga acggcagggg
     1741 tggctatatc ggcccgctgc atttctgcct ggagtgcacc cagcccgagg ccctggaggc
     1801 gaaaaggctg gaggcgccgg gccg
//
LOCUS       DATGWW010000116         1956 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_140417, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000116 DATGWW010000000
VERSION     DATGWW010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1956
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140417"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..919
                     /locus_tag="VK150_01725"
     CDS             <1..919
                     /locus_tag="VK150_01725"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLP30048.1"
                     /translation="QEKGITKIICPAAGSASMTQWSKAGVKDLSIFRFAAHDGIQAAM
                     VVEEAINRKFTKVAVVYDSTNYGVSGRDDMLDQIKKQGNKLTVVAQEKFNIGDKDMTA
                     QLLRAKSLGAQAILIWGIGPELAAVSNGMAKIGMKAPLIGGWTLSMSNFIDNAGKNGN
                     GTLMPQTFIEEPITPKAKSFIEGFHRTFKVGRIPSPVAAAQGYDAVYLMAAAIKQAGS
                     TDTRKVKEALEDLKEPVVGVIATWNHPYTKWDPADVTTHEAFRREQTVMGMVKDGRVV
                     FGNDSDRERLRKSAVSATPAKVKGKAKSK"
     gene            989..1867
                     /locus_tag="VK150_01730"
     CDS             989..1867
                     /locus_tag="VK150_01730"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLP30049.1"
                     /translation="MNPSIIGQMAVSGALMGLVYALIAYGFQLTYATSKSINFGQGEL
                     VMVSAFFSLTLTNLGLPYWAMIPGGLLFGALMGLVVERAGVRLALEQKGEGWILLTII
                     IGLFLFSAAENIWGRDDRPFPTPISADPIHVLGVDITRLELSVAVGVLAIMGAIELFK
                     RRTLLGKAFEAVSADRDAAELMGISATRTVMLSYGLSGAVAALAGILVSPITTVGPTM
                     ASALILKAFSVAVVAGLDSGFGVVLVGMFLGALESLASFYLGSGWREAPGLVLLILAL
                     AVRPTGVFGKAVIRKV"
BASE COUNT          321 a          705 c          608 g          322 t
ORIGIN      
        1 gcaggagaag ggcatcacca agatcatctg ccccgcggcg ggttccgcct ccatgaccca
       61 gtggagcaag gccggcgtga aggacctctc catcttccgc ttcgccgccc acgacggcat
      121 ccaggcggcc atggtggtgg aggaggccat caaccgcaag ttcacgaagg tggccgtggt
      181 ctacgactcc accaactacg gcgtctccgg ccgggacgac atgctggatc agatcaagaa
      241 gcagggcaac aagctgaccg tcgtggccca ggagaagttc aacatcggcg acaaggacat
      301 gaccgcgcag ctgctccgcg ccaagtccct cggcgcccag gccatcctca tctggggcat
      361 cggccccgag ctggcggccg tctccaacgg catggccaag atcggcatga aggcgcccct
      421 catcggcggc tggaccctct ccatgtccaa cttcatcgac aacgccggca agaacgggaa
      481 cggcaccctg atgccccaga ccttcatcga ggagcccatc acccccaagg ccaagagctt
      541 catcgagggg ttccacagga ccttcaaggt ggggcgcatc ccctcccccg tggccgccgc
      601 ccaaggctat gacgcggtct atctcatggc cgccgccatc aagcaggccg gcagcaccga
      661 cacccgcaag gtcaaggagg ccctggagga cctgaaagag cccgtggtgg gcgtcatcgc
      721 cacctggaac cacccctaca ccaagtggga cccggcggac gtgaccaccc acgaggcctt
      781 ccggcgcgag cagacggtca tgggcatggt gaaggacggc cgcgtggtct tcggcaacga
      841 ctccgaccgg gagcgcctcc gcaagtcggc ggtttcggcc acgcccgcga aggtcaaggg
      901 caaggccaag tcgaagtagg cccgcctccg tgaatccggg gggcttcggc cccccggccg
      961 tttcccctcc catccaggca ggccgggcat gaacccttcg atcattggac agatggccgt
     1021 gagcggcgcg ctgatggggc tggtctacgc cctcatcgcc tacggctttc agctcaccta
     1081 cgccaccagc aagagcatca acttcggcca gggcgagctg gtgatggtct cggccttctt
     1141 cagcctcacc ctcacgaacc tcggcctgcc ctactgggcc atgatccccg gcggcctcct
     1201 cttcggcgcc ctgatggggc tcgtcgtcga gcgggccggc gtgcggctcg ccctcgagca
     1261 gaaaggcgaa ggctggattc tgctcaccat catcatcggc ctcttcctgt tctcagcggc
     1321 cgagaacatc tggggccgcg acgaccgccc cttccccacc cccatttctg ccgatcccat
     1381 ccatgtgctg ggcgtggaca tcacccggct ggaactgtcc gtcgccgtgg gggtgctggc
     1441 catcatgggc gccatcgagc tgttcaagcg ccgcacgctg ctgggcaagg ccttcgaggc
     1501 ggtctcggcc gaccgcgacg cggctgaact catgggcatc tccgccaccc gcacggtcat
     1561 gctctcctac ggcctgtccg gcgccgtggc ggccctggcg ggcatcctcg tgtcccccat
     1621 caccaccgtg ggccccacga tggcctcggc gctcatcctc aaggccttct ccgtggccgt
     1681 ggtggcgggc ctggattcgg gtttcggcgt ggtgctcgtg ggcatgttcc tgggcgcgct
     1741 ggaaagcctg gccagcttct acctgggcag cgggtggcgg gaggcaccgg gcctggtgct
     1801 gctcattctc gcgctggcgg tgcggcccac cggcgtgttc ggcaaagccg tcatccggaa
     1861 agtctgacat gcgacggctc atcctcctcc gcggcgccga gctcatcgtc ttcgccttcc
     1921 tggccaccat ccccctgctg gtggtgaacc cctacg
//
LOCUS       DATGWW010000117         2942 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_280352, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000117 DATGWW010000000
VERSION     DATGWW010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2942
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280352"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..>2942
                     /locus_tag="VK150_01735"
     CDS             62..>2942
                     /locus_tag="VK150_01735"
                     /inference="COORDINATES: protein motif:HMM:NF024754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HLP30050.1"
                     /translation="MPGAPPDPSTHPLLQRLNAPQREAVQHAHGPLLILAGAGSGKTT
                     VITRRIAWLIEEEGVHPGSILAMTFTNKAAEEMRERVQRLVSVPAAQMWVSTFHSFCT
                     RILRREGDRTPVGRDFVIFDPADQKSLVKQVLAELKLPEKQFHPKKVLELISDFKNRC
                     LLPEEAKEEALDPWTRKVLDAYDLYQKGLKNHRACDFDDLLLWTERLFRDPVMQATYG
                     ERFKFILVDEYQDTNRAQYLLVQHLARRHHNLCVVGDEDQCLATGTRVLMADGREQPI
                     ERVAPGDLVSAAHGSGDFRAAKVLKAAARMRDGSGIRITTASGRRLTSTPEHIHIAGY
                     RLGVSPQLHFVYLMRKRGTGWRLGTSQTHTRGQVKPVVGFLQRARQEHADELWVLSTH
                     SSEPEARLQEEVWSLQYQLPTLPFVPRKGGSTRGLVHDAEAIRHVFAAVDSASGAERL
                     LSDLGMAVEAPHHRAQASTGHRRQVTVTLCGDRRGKRPMHRISMVGRSAEDRRVLEGL
                     GLSVRPAKAGSASWRMETCAASFEDIRRTADRIRQHLDADLHLQARLGANPSRESNSL
                     PFLPACNLKPGMVLFDCQGRLDVVDRVERVPLASQVHDLDVEGVHTFVANGLVTHNSI
                     YGWRGADIRNILDFQQDFPEAVRIELLQNYRSTKKILDAASEVIANNAQRVEGKGALQ
                     TDLGEGESIQFKLADEGRLEAEWVVQRIQELRYLHHEAKVAVLYRANWQSRQMEEALR
                     AQNLPYRLVGGVKFYERQEVKDLISYLRLISNPFDLVSFRRCVNAPTRGVGPTTLGKI
                     EAAIPEGGTALEGLALLLRSGELKGRAQRELAKFLDLFHRAGAEREAQGLTGMVKWVL
                     QESGYLQSLEDEATLEAEGRIRNLEEFLSAAAESESLGLRLSEFLDRITLAADADQIE
                     EAAQLSLMTIHCAKGLEFPYVFVIGMEEDVFPNRNARETPDGLEEE"
BASE COUNT          504 a         1036 c          989 g          413 t
ORIGIN      
        1 ccgacgggga ttaggcaaag ccgtcccctc ggaacgggga gcgggccgat aggatgaagg
       61 gatgcccggc gcccctcccg acccttcgac ccaccccctg ctgcaacgcc tgaacgcccc
      121 ccagcgggag gcggtccagc acgcgcacgg cccgttgctc atcctcgccg gggcgggatc
      181 gggcaagacc acggtgatca cccggcgcat cgcctggctc atcgaggagg agggcgtcca
      241 cccgggttcc atcctggcca tgaccttcac caacaaggcc gccgaggaga tgcgggagcg
      301 ggtccagcgc ctggtctccg tgcccgcggc ccagatgtgg gtgagcacct tccacagctt
      361 ctgcacccgc atcctgcgcc gggagggcga ccgcacgccc gtgggccgcg atttcgtcat
      421 cttcgacccc gccgaccaga agagcctcgt caagcaggtg ctcgccgagc tgaagctgcc
      481 cgagaaacag ttccacccga agaaggtgct ggagctcatc agcgacttca agaaccgctg
      541 cctgctgccg gaggaagcga aggaggaggc cctggacccc tggacccgta aggtcctcga
      601 cgcctacgac ctctaccaga agggcctgaa gaaccaccgc gcctgcgact tcgacgacct
      661 gctgctgtgg acggaacggc tcttccgcga ccccgtgatg caggccacgt acggcgagcg
      721 gttcaagttc atcctcgtgg acgagtacca ggacaccaac cgcgcccagt acctgctggt
      781 gcagcacctg gcgcggcgcc accacaacct gtgcgtggtg ggtgatgaag accagtgcct
      841 ggccacggga acccgcgtgc tcatggccga tggccgggaa cagcccatcg agcgggtggc
      901 cccgggagat ctggtcagcg ccgcccacgg cagcggggat ttccgggcgg ccaaagtcct
      961 caaggcggcc gctcggatgc gcgacggttc gggcatccgc atcacgacgg cctccgggcg
     1021 gaggctcacg agcacccctg aacacatcca catcgccggc taccggctgg gcgtctcgcc
     1081 ccagcttcac ttcgtctacc tcatgcgcaa gcggggcacc ggttggcgcc tgggcaccag
     1141 ccagacccac acccgggggc aggtgaagcc tgtggtcggc ttccttcagc gcgcgcggca
     1201 ggaacatgcc gacgagctgt gggtgctctc cacccacagc agcgaaccgg aggcccggct
     1261 ccaggaggag gtgtggtcgc tgcaatacca gctgccgacc ctccccttcg tgccgcgcaa
     1321 gggcggctcc acccgggggc tggtccatga tgcagaggcc atccggcacg tgttcgccgc
     1381 cgtggattcc gcgtccggcg ccgagcgcct gctgtctgac ctgggcatgg ccgtggaggc
     1441 cccgcaccac cgcgcccagg ccagcacggg ccaccgtcgg caggtgaccg tgaccctctg
     1501 cggcgaccgc cgcggaaagc ggcccatgca ccgcatctcc atggtgggcc gcagcgcgga
     1561 agaccgccgc gtgctggaag gcctgggcct ttcggtgcgc ccggccaagg cgggttcggc
     1621 gagctggcgc atggagacct gcgccgcctc attcgaggac atccgccgca ccgccgaccg
     1681 catccgccag cacctggatg cggacctgca cctgcaggcc cgcctgggtg cgaatccgtc
     1741 gcgggaatcc aacagcctgc ccttcctccc ggcctgcaac ctgaaacccg gcatggtcct
     1801 gttcgactgc cagggccgcc tggacgtggt ggatcgcgtg gaacgggtgc cgctggcatc
     1861 gcaggtccac gacctggatg tggaaggggt gcacaccttc gtggccaatg ggctcgtcac
     1921 ccacaactcc atctatggct ggcgtggcgc agacatccgc aacatcctcg acttccagca
     1981 ggacttcccc gaggccgtgc gcatcgagct gttgcagaac taccgctcga cgaagaagat
     2041 cctcgacgcg gcctcggaag tcatcgccaa caacgcccag cgggtggagg gcaagggcgc
     2101 cctgcagacg gacctgggcg agggcgagtc catccagttc aagctggccg acgagggccg
     2161 gctcgaggcc gagtgggtgg tgcagcgcat ccaggagctg cggtacctcc accatgaggc
     2221 caaggtcgcc gtgctctacc gggcgaactg gcagtcgcgg cagatggaag aggcgctgcg
     2281 ggcccagaac ctgccctacc gcctggtggg cggcgtgaag ttctacgagc gccaggaagt
     2341 gaaggacctc atctcgtatc tgcgcctcat ctcgaatccc ttcgacctgg tgagcttccg
     2401 ccgctgcgtg aacgcgccca cccgcggcgt ggggcccacc acgctcggca agatcgaggc
     2461 ggccatcccc gagggcggca cggccctcga ggggctggcc ctgctgctgc ggtccggcga
     2521 gctgaaggga cgggcgcagc gcgagctggc gaagttcctg gatctgttcc accgcgccgg
     2581 ggccgagcgg gaggcccagg gcctcacggg catggtgaag tgggtgctgc aggagagcgg
     2641 ctacctccag agcctcgagg acgaggccac cctggaggcc gaaggccgca tccgcaacct
     2701 ggaggagttc ctcagcgccg ccgccgaatc cgaatcgctc gggctgcgcc tgtcggaatt
     2761 cctggaccgc atcacgctgg cggcggacgc agaccagatc gaggaggcgg cccagctcag
     2821 cctgatgacc atccactgcg ccaaggggct ggagttcccc tatgtcttcg tcatcggcat
     2881 ggaagaggac gtcttcccca accgcaacgc ccgggagacg cccgacggcc tcgaggagga
     2941 ac
//
LOCUS       DATGWW010000118         1593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_416572, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000118 DATGWW010000000
VERSION     DATGWW010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416572"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            354..1496
                     /locus_tag="VK150_01740"
     CDS             354..1496
                     /locus_tag="VK150_01740"
                     /inference="COORDINATES: protein motif:HMM:NF042789.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HLP30051.1"
                     /translation="MSKKETPLFPLRKGLHTRQAHVDLPEGTFEEEHARQGFFGRTTH
                     LYRLHPVTDWTRIEGPLRPHSYDLNPLLPFKEAAVRASMFGSTEVAFAPICVLHNQDV
                     ALHWVVPSTMDFFYRNADGDDVYYVHAGSGKLETTFGALTYATGDYLVIPRGTTYRFL
                     PDEGPQRYLLIESFSEVTIPDRNQLGPNAIFDPAMVDTPELEPYDATPREWAVHIKRE
                     NQITKVFYPFNPLDVVGWKGDLTVWRINVKDIRPILSARYHLPPSAHSTFIANNFVIC
                     SFLPRPFEEEEGAMRVPFYHSNIDYDEVLFYSAGHFFSRDGIGAGMMTWHPQGIHHGP
                     HPKAIPLSRTKERTDEVAVMVDTFRPLKATPAAELVENRDYWASWK"
BASE COUNT          272 a          577 c          500 g          244 t
ORIGIN      
        1 ggcgccgaga ctcaggcgag cgggctgctg aagctcgatc cccgggccgc ggccacgggc
       61 tggatcatcc tcaccctctt cggcctgggc agcgcgctga gcctctggtt ctacaaccgc
      121 tggctgcaga agcaggcctg accgcggccc cgcgggggcg gcctggcatg gtgaccggga
      181 gggcgcgacg gttggcgacg ctccggtgat gaatcggatc cggcgcgggc cctgcgttca
      241 cgcgccctgc ggttgtttcc gcgaggccgc ctggttgccc ggggcgccgg gaattggcaa
      301 catctgtgga cacagtttcc cgcgataatg ccaagtgccg ccctgaggtc cccatgtcca
      361 agaaggaaac cccgctcttt ccgctgcgca agggcctgca cacccggcag gcccacgtcg
      421 acctgcccga gggcaccttc gaggaggagc acgcccggca gggcttcttc ggccggacca
      481 cgcacctcta ccgcctgcat ccggtcacgg actggacgcg catcgagggg cccctgcgtc
      541 cccacagcta cgacctgaac cccctgctgc cattcaagga ggccgctgtg cgcgcctcga
      601 tgttcggctc gacggaggtg gccttcgcgc ccatctgcgt gctgcacaac caggacgtgg
      661 ccctccactg ggtcgtgccc tcgaccatgg atttcttcta ccggaacgcc gatggcgacg
      721 acgtctacta cgtccacgcg ggatcgggaa agctggagac caccttcggc gcgctcacct
      781 atgccaccgg cgactacctc gtgatccccc gcgggaccac gtaccgcttc ctgccggacg
      841 aaggacccca gcgctacctg ctcatcgaga gcttcagcga ggtcaccatt cccgaccgca
      901 accagctggg gcccaatgcc atcttcgacc cggccatggt ggacacgccg gagctggagc
      961 cctacgacgc cacgccgcgg gagtgggccg tccacatcaa gcgcgagaac cagatcacca
     1021 aggtgttcta ccccttcaac ccgctggacg tggtgggctg gaagggcgat ctcacggtgt
     1081 ggcgcatcaa cgtgaaggac atccgtccca tcctgagcgc gcgctaccac ctgccgccct
     1141 cggcccacag caccttcatc gccaacaact tcgtgatctg ctccttcctg ccgcgcccct
     1201 tcgaggagga ggagggcgcc atgcgcgtgc ccttctacca ctcgaacatc gactacgacg
     1261 aggtgctgtt ctactcggcc ggccacttct tctcgcggga cggcatcggc gccgggatga
     1321 tgacctggca cccccagggc atccaccacg gaccccaccc gaaggccatt cccctcagcc
     1381 gcaccaagga gcgcaccgac gaggtggccg tgatggtgga caccttccgc ccgctcaagg
     1441 ccacgccggc ggcggagctg gtggagaacc gcgactactg ggccagctgg aagtaggcgg
     1501 gcccggcccc gggcgcatca gtggcgggcc acatcccagc cgaaatagcg cttgaggaac
     1561 gcggaaaagg tcatgtgcag gaatcgcagc ggc
//
LOCUS       DATGWW010000119         1582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_280404, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000119 DATGWW010000000
VERSION     DATGWW010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280404"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..582)
                     /locus_tag="VK150_01745"
     CDS             complement(67..582)
                     /locus_tag="VK150_01745"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HLP30052.1"
                     /translation="MSQDAAFDAATRETFLKRYADGPALLRWAWEAVPPEARTWRPAE
                     GRWSAHEVVVHCADSETYAATRIRLLLAEVEPLIVGYDENLWARRFDYHASDPELALH
                     VVETVRAHTSAMLATLPDQAWGRMGRHTHSGPYGTDHWLRSYGEHLEVHAAQIRRNLT
                     AWAEGPGKGRG"
     gene            683..>1582
                     /locus_tag="VK150_01750"
     CDS             683..>1582
                     /locus_tag="VK150_01750"
                     /inference="COORDINATES: protein motif:HMM:NF028457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5117 domain-containing protein"
                     /protein_id="HLP30053.1"
                     /translation="MTPRRLTSLALALSASLLPAQRPTILPAQANGAPAARPAAPEAG
                     EPKPYDKVVTAEAKTQEGFFKVHQVKGKVYFEIPKARLDQELLLVVSANRTPANIDHA
                     GRVVDSDVVRWVLKDHRVLLQQVSHAVVADPAKPVAKAVAASTADTILMSFPVEAFAK
                     DGAPVIEASRLFTTEVPELSARQLLGAQVFDASRSYVDKVKVFPANLNVEAVQTYSAP
                     FAPAGAPMAPTPFGTPSLRPGTSGTVTMFYSFVQLPEKPMMARIFDERLGFFSVRNTD
                     YGRDEHEATRRTYITRWRLEKKDP"
BASE COUNT          246 a          569 c          532 g          235 t
ORIGIN      
        1 ccggcaggtc cgcggcaggc gggtcctgga ggccgaggcg ccggaggtag gccgcgaggt
       61 ccaggctcat ccgcgcccct ttcccgggcc ttcagcccag gccgtcaggt tccgtctgat
      121 ctgggcggcg tggacctcca ggtgctcgcc gtagctgcgc agccagtggt cggtgccgta
      181 cgggccgctg tgggtgtgcc ggcccatgcg gccccaggcc tggtcaggca gggtggcgag
      241 catggccgag gtatgggcgc ggactgtctc caccacatgg agggccagct ccggatccga
      301 ggcgtggtag tcgaagcggc gggcccagag gttctcgtcg tagcccacaa tgaggggctc
      361 gacctcggcc agcagcagcc ggatgcgggt ggcggcgtag gtttccgaat ccgcgcagtg
      421 gaccaccacc tcgtgggcgc tccacctccc ttcggccggc cgccaggtgc gggcttccgg
      481 ggggaccgcc tcccaggccc agcgcagcag ggccgggcca tcggcatagc gcttcaggaa
      541 agtctcccgg gtggcggcgt cgaaggctgc gtcctgagac atggatcacc tctcttccag
      601 gatgccgcca ggatgggaaa aatgaaccct catcttgcga ggcaaacatg gtttcatggt
      661 ggcacctctc tccggagccc ccgtgacgcc tcgccgtttg accagcctcg ccctggccct
      721 cagcgccagc ctcctgcccg cccagcggcc gaccatcctg ccggcgcagg ccaatggcgc
      781 tcccgcggcc cggcccgccg cccccgaggc cggcgagccc aagccctacg acaaggtggt
      841 cacggccgag gccaaaaccc aggagggctt cttcaaagtc caccaggtga agggcaaggt
      901 ctacttcgag atccccaagg cccgcctcga ccaggagctg ctgctcgtgg tgtccgccaa
      961 ccgcacgccc gccaacatcg accacgcggg ccgggtggtg gattccgatg tggtgcgctg
     1021 ggtgctgaag gaccaccggg ttctgctcca gcaggtctcc cacgcagtgg tggcggatcc
     1081 cgcgaagccc gtggccaagg ccgtggcggc ctccaccgcc gacaccatcc tcatgagctt
     1141 ccccgtggag gccttcgcca aggatggcgc cccggtcatc gaggcgagcc gcctgttcac
     1201 cacggaagtg cccgagctga gcgcgcgcca gctcctgggc gcccaggtgt tcgacgccag
     1261 ccggagctac gtggacaaag tgaaggtttt ccccgcgaac ctgaacgtgg aggccgtgca
     1321 gacctacagc gcgcccttcg ccccggcggg agcccccatg gcgcccacgc ccttcggcac
     1381 gccgtcgctg cgtcccggga ccagcggcac ggtgacgatg ttctattcct ttgtgcagct
     1441 gcccgagaaa cccatgatgg cccgcatctt cgacgagcgc ctggggttct tcagcgtgcg
     1501 gaacaccgac tacggccgcg acgagcacga ggccacgcgc cgcacctaca tcacccgctg
     1561 gcgcctggag aagaaggatc cc
//
LOCUS       DATGWW010000120         3243 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_416825, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000120 DATGWW010000000
VERSION     DATGWW010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3243
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416825"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(220..798)
                     /locus_tag="VK150_01755"
     CDS             complement(220..798)
                     /locus_tag="VK150_01755"
                     /inference="COORDINATES: protein motif:HMM:NF014796.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-Mn family superoxide dismutase"
                     /protein_id="HLP30054.1"
                     /translation="MAYTAKSYDHLKGGALKGLSDAQLDQHFTLYKGYVTKLNEIEEK
                     LATADNTKPNYSFNDFSELKRREAVAFNGSFLHELYFENLGADSTVSAGLKAALDAAG
                     GQDKVIADLKATAMGGPGWALLTRNRRDGKLHTYFVAEHHLGLPIEQDLLLVLDSWEH
                     AFMVDYGIARAKYLDTFVENIKWSEVSKRFGK"
     gene            complement(900..1343)
                     /locus_tag="VK150_01760"
     CDS             complement(900..1343)
                     /locus_tag="VK150_01760"
                     /inference="COORDINATES: protein motif:HMM:NF012436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HLP30055.1"
                     /translation="MSRSVIDHLNSELATAQVLALNAKRYHWTVTGPHFRDYHLRFEE
                     LYTAADGTVDELAERIRMLGGVPIHAPAQIEAQTKAAVSNPAARLDPEAMLKEALANE
                     EATIALMHEGIELANGAGDPGTADLLTRFVQTHQKEAWFLREMLG"
     gene            complement(1354..1899)
                     /locus_tag="VK150_01765"
     CDS             complement(1354..1899)
                     /locus_tag="VK150_01765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3501 family protein"
                     /protein_id="HLP30056.1"
                     /translation="MLAFDPATERSRFESRQAFLARQAALRLDLAAGITFQPETLESV
                     EDQVIETLWAEGMTLDTAPPEDLAESRASFAVLAPRREPGGKSIVATLFLGFPDEVRD
                     ARLAALQRFPDQLCLELSDGSRAMPAVDRGTAGPDDRLPSVLALRYFLPDGCAIAALV
                     SNHAEVTGRWAAPATWTTWPS"
     gene            complement(1910..2374)
                     /locus_tag="VK150_01770"
     CDS             complement(1910..2374)
                     /locus_tag="VK150_01770"
                     /inference="COORDINATES: protein motif:HMM:NF014912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubrerythrin family protein"
                     /protein_id="HLP30057.1"
                     /translation="MSFTESKTHQNLKAAFAGESQANRRYTWMSQVAEKEGLPEVAAL
                     FKHSADGETGHALKHLMFLAAQAGDPATGMPLGDTLTNLKSAVAGETYEYTDMYPEFA
                     RKAREEGYAEIAAWFETLAKVERFHAGRFQDALTRLQSGAIAAPDADIAKHV"
     gene            complement(2549..>3243)
                     /gene="bla"
                     /locus_tag="VK150_01775"
     CDS             complement(2549..>3243)
                     /gene="bla"
                     /locus_tag="VK150_01775"
                     /EC_number="3.5.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF033103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class A beta-lactamase"
                     /protein_id="HLP30058.1"
                     /translation="SGERFPLCSTFKALLGGLVLARVDAGREALNQRATYTRADLVPH
                     SPVTGAHVAEGAMTVGDLCAATIQESDNAAANLLLARLGGPAALTAYLRSLGDATSRL
                     DRTEPELNSALPGDLRDTTTPAAMAATLRTLLLGEALLPTSRHRLEAWMRGATTGKAK
                     LRAGLPADWLVGDKTGAGDFGTMNDVAILRPPGRAPIVVTVYLTGSKASWDDREAVIA
                     EVGRTVARAFRD"
BASE COUNT          465 a         1007 c         1231 g          540 t
ORIGIN      
        1 tgcgccctcc tgctcggccc gtggcctcgc agacctggag cctcccactt gatgttctcg
       61 acaacggggc tccctccgcg agcctgaggc gattgggagc acagcgcggg gcgctgtgcg
      121 ataggtggag gcgtgggacc ggaagaaaaa aggcgggccc ccaatccggg ggcccaacct
      181 cgagcacgcg tggaacggcg ttgaaacgcc cgcgccttct tatttgccga accgcttgga
      241 gacctcgctc cacttgatgt tctcgacgaa ggtgtcgagg tacttcgcgc gggcgatgcc
      301 gtaatcgacc atgaacgcgt gctcccagct gtccagcacc agcagcagat cctgctcgat
      361 gggcaggccc aggtggtgct cggccacgaa gtaggtgtgc agcttgccgt cgcggcggtt
      421 gcgggtgagc agggcccagc cggggccgcc catggccgtg gccttgaggt cggcgatcac
      481 cttgtcctgg ccgccggcgg cgtccagggc ggccttgagg ccggcgctga cggtgctgtc
      541 ggcgcccagg ttctcgaaat agagctcgtg gaggaaggac ccgttgaagg ccacggcctc
      601 gcggcgcttc agctcgctga agtcgttgaa ggagtagttg ggcttggtgt tgtcggccgt
      661 cgccagcttc tcctcgatct cgttcagctt ggtgacgtag cccttgtaca gcgtgaagtg
      721 ctggtcgagc tgggcgtcgc tgagcccctt gagggcgcca cccttcaggt ggtcatagga
      781 tttggcggtg taggccatga tcatctcctt ggctgcgcaa agcgcggatg agtagtttac
      841 caataaagtc ggaaatcaga aaaagcaggc tgaggcgcga cgttccgcgt ctatggccgc
      901 taccccagca tctcccggag gaaccaggct tccttctggt gggtctgcac gaagcgggtc
      961 agcaggtcgg cggtgccggg gtcgccggcg ccgttggcca gctcgatgcc ctcgtgcatg
     1021 agtgcgatgg tcgcctcctc gttggccagg gcctccttca gcatggcttc ggggtccagc
     1081 cgggcggcgg ggttggagac ggccgccttg gtctgggcct cgatctgggc gggagcatgg
     1141 atcggcacgc cgcccagcat gcggatgcgt tccgccagct cgtccacggt gccgtcggcg
     1201 gcggtgtaga gctcctcgaa gcgcaggtgg tagtcgcgga aatgggggcc ggtgacggtc
     1261 cagtggtagc gcttggcgtt gagggccagc acttgggcag tggcgagttc gctgttcagg
     1321 tggtcgatga cggaacggct catgggtctc tcctcaggaa ggccaggtgg tccaggtggc
     1381 aggggcggcc cagcggccgg tcacctcggc gtggttggag acgagggcgg cgatggcgca
     1441 gccgtccgga aggaagtagc gcagcgccag caccgagggc aggcggtcat cggggcccgc
     1501 cgtgccgcgg tccacggcag gcatggcccg cgagccgtcc gacagctcga ggcagagctg
     1561 gtcggggaag cgctggaggg cggccaggcg cgcgtcgcgc acctcgtcgg gaaagcccag
     1621 gaacagggtg gcgacgatgc tcttaccgcc gggctcccgg cgcggagcca gcaccgcgaa
     1681 ggaggcgcgg gactcggcca ggtcttcggg cggcgcggtg tccagcgtca tgccttcggc
     1741 ccagagggtc tcgatcacct gatcctcgac gctctcgagg gtctcgggct ggaaggtgat
     1801 gcccgccgcc agatccagcc gcagcgcggc ctgacgggcc aggaaggcct ggcgggactc
     1861 gaagcgggaa cgctctgtgg cgggatcgaa ggcgagcatc ttgggcgcct cagacgtgct
     1921 tagcgatgtc ggcgtcgggg gcggcgatgg cgccggactg gagccgcgtc agcgcatcct
     1981 ggaagcggcc ggcgtggaag cgctccacct tggcgagggt ctcgaaccag gcggcgatct
     2041 cggcgtagcc ctcttcccgg gccttgcggg cgaactcggg atacatgtcg gtgtactcgt
     2101 aggtctcgcc tgcgaccgcg gacttcaggt tggtgagcgt gtcgcccagg ggcatgcccg
     2161 tggcggggtc gccggcctgc gccgccagga acatgaggtg cttcagggcg tggcccgtct
     2221 cgccgtcggc gctgtgcttg aagagggcgg ccacttcggg gaggccttct ttctcggcca
     2281 cctgggacat ccaggtgtac cggcggttcg cctggctctc gccggcgaag gcagccttga
     2341 ggttctggtg cgtcttggac tcggtgaagg acatggcgtc tcctgtgggg ccgcggtcgg
     2401 cggcatcaag gtagagccat ccccatgcca aagcaataag tactgtttta tgtattctta
     2461 caattagcga gcacaatgcg ccgccgaatg attcccggcg ggtcgcgagc ggaattcccg
     2521 acatgccggg aggacccggc gccgatagtc agtcccggaa ggcccgggcc acggtgcggc
     2581 ccacctcggc gatcacggcc tcacggtcat cccaggaggc cttcgagccg gtgaggtaga
     2641 ccgtcacgac gatgggcgcc cggcccggcg gccgcaggat ggcgacatcg ttcatggtgc
     2701 cgaagtcccc ggccccggtc ttgtctccga cgagccagtc ggcgggcagg cccgcgcgga
     2761 gcttggcctt cccggtggtc gcgccgcgca tccaggcctc gagccggtgg cgggaggtgg
     2821 gcagcagggc ctcgcccagg agcagggtcc gcagcgtggc cgccatggcc gccggggtgg
     2881 tggtgtcgcg gaggtcgccg ggcagggcgc tgttcaactc cggttccgtg cggtcgaggc
     2941 gggaggtggc atcgcccaga ctccgcaggt aggcggtgag ggccgcgggg ccgccgaggc
     3001 gcgcgagcag caggttcgcc gcggcgttgt cgctctcctg gatcgtggcc gcgcagaggt
     3061 cgcccacggt catggcgcct tccgcgacgt gggccccggt cacgggcgag tggggcacca
     3121 ggtcggcccg ggtgtaggtg gcgcgctggt tgagggcctc gcggcccgcg tccacccggg
     3181 ccagcaccag gccgcccagg agggccttga aggtgctgca gagggggaag cgttccccgc
     3241 tgc
//
LOCUS       DATGWW010000121         2495 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_320959, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000121 DATGWW010000000
VERSION     DATGWW010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2495
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320959"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            115..1821
                     /locus_tag="VK150_01780"
     CDS             115..1821
                     /locus_tag="VK150_01780"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP30059.1"
                     /translation="MAVPRPTWIPQAALAVLLTGAILGGVVLLTSGSEGLPAPRALLV
                     VLGAVGLGAWLGAYVRMRWSDRPRLLRAEVRWAAGHPASDVLEELGDHAWAWGETGYR
                     RLLLRSALHLSLGYRDRAWLDGLEAQLARLPLWKRLIVARAFRRVPGRPSARRMAWGE
                     RLITLAPNLGRLRHLQGILLLRVAEPEALHLAWEHFESALPRAWDDPLILEDLLLAGL
                     QHGREDLAEQALQVLTARHGDPRLPWDRGAAGMHLLRQARYVEALALVQGLPPERRPQ
                     PLLWLAESVSRRQLGDLEGAWRTIEAAITCLPGAFRLWMERYQVALERHQDAEALQSL
                     ESAWQTIPNDDEGESLRQEWHLRRAEFAFWWQDRPAFARELLESVPPEARGDHHPPLS
                     LQIQVAEGAFEAAYAEVTVLLKDHPEDVDLLLVQADCLAGMEAWEALQPFLDSLGEAC
                     RERPAFWHLRGVTRANLGDHMPARLDLERAVRMDPRNLRYLLDAGHACAELGDWDRAE
                     SHWRQALQVEPQEEEALIHLAEARRELQDLDGARRYLRECLMHHPDSLEAQTRLAELE
                     AN"
     gene            complement(1823..>2495)
                     /locus_tag="VK150_01785"
     CDS             complement(1823..>2495)
                     /locus_tag="VK150_01785"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP30060.1"
                     /translation="VVPVGSIGQELVADFLPEIRRDSQLIAILELKRVRALFHSNRAV
                     ELLAESKYPEAMAEANESIQVDPSLGVGWNILGVVQRNQGHEAEAEKSFLKAIEMDPR
                     DGAPCGNLENLLRAQGRDVEAQVYRERGLEVRKRDPFFNAFLAEEALQDNQWDEAMKR
                     IKQAIRLLPQEPDFYLIQARISLAQGHSKDAIKALEKARKWSMPDMKARYDAKLALLK
                     GDVPK"
BASE COUNT          338 a          897 c          868 g          392 t
ORIGIN      
        1 gaacgaacct gcgttccgac cgccccagtg cgcacctcac ccgatcaagg ggtcctcgac
       61 gggacgtgca gatccctcgt ttccccggtc ccccggacgg cccatactcg aaccatggcc
      121 gtgccgcgtc cgacctggat ccctcaagct gccctggcgg tgctgctgac cggcgccatc
      181 ctgggcggcg tggtgctgct gacctccggc agcgaagggc tgcccgctcc gcgggcgctg
      241 ctcgtggtgc tgggcgccgt gggacttggc gcctggctcg gcgcctacgt gcggatgcgg
      301 tggagcgacc gtccgcgcct gctccgggcc gaagtgcgct gggcggcggg gcatccggca
      361 tccgacgtcc tcgaggaact cggagaccac gcctgggcct ggggcgagac agggtaccgg
      421 cgcctcctgc tgcggagcgc cctgcacctg tcgctcggct accgcgaccg ggcctggctg
      481 gatggcctgg aagcccagct ggcccggctc cccctctgga agcggttgat cgtggcccgg
      541 gccttccggc gggtgccagg ccggccctcg gcgcgccgta tggcctgggg cgagcggctg
      601 atcaccctgg caccgaacct ggggcggctg cgacacctcc agggcatcct gttgctgcgc
      661 gtggccgagc ccgaagcgct ccacctcgcc tgggagcact tcgagtcagc cttgccccgg
      721 gcctgggacg acccgctcat ccttgaggac ctcctgctgg cggggctcca gcacggtcgg
      781 gaggacctgg cggagcaggc cctgcaggtg ctgacggcgc ggcacggcga ccctcgcctg
      841 ccctgggacc ggggagccgc gggcatgcac ctcctgcggc aggcgcgcta tgtggaggcg
      901 ctggccctgg ttcaggggct ccctccggag cggcggcccc aacccctgct gtggctggct
      961 gaatccgtct cccggcgcca gctcggggat ctcgagggag cctggcggac catcgaggcg
     1021 gccatcacct gcctgcccgg cgccttccgg ctctggatgg agcgctacca ggtcgccctg
     1081 gaacgccacc aggacgcgga ggccctccag agcctggaat cagcctggca gaccatcccc
     1141 aacgacgacg agggtgaatc tctccgccag gaatggcacc tccgccgggc cgagttcgcc
     1201 ttctggtggc aggaccgtcc ggccttcgcc cgggaactgc tggagtccgt gccgccggag
     1261 gcccgggggg atcaccaccc gccgctgtcg ctgcagatcc aggtggcgga aggggccttc
     1321 gaggccgcct acgccgaggt cacggtcctg ctgaaggacc acccggagga tgtggacctg
     1381 ctgttggtcc aggcggactg cctggcgggc atggaggcct gggaggccct gcagcccttc
     1441 ctcgacagcc tcggagaggc ctgccgcgag cgcccggctt tctggcatct ccggggcgtg
     1501 acccgggcca acctgggcga ccacatgcct gcccgcctcg acctggagcg cgccgtgcgg
     1561 atggatccac gcaacctccg ctacctgctg gatgccggcc acgcctgtgc ggagctgggc
     1621 gactgggacc gcgcggagag ccactggcgc caggccctcc aggtggagcc gcaggaggag
     1681 gaggccctca tccacctcgc cgaggcccgc cgggaactgc aggatctcga cggggcccgc
     1741 cgctacctga gggagtgcct catgcaccac cccgacagcc tggaagccca gacccgactg
     1801 gcggagctgg aggccaacta ggtcacttgg gtacgtcgcc cttcaggagc gcgagcttgg
     1861 cgtcgtagcg ggccttcatg tccggcatgg accacttgcg cgccttctcc agcgccttga
     1921 tggcgtcctt gctgtgtccc tgggccaggc tgatgcgagc ctggatgagg tagaagtcgg
     1981 gttcctgcgg caggagccgg atggcctgct tgatgcgctt catggcctcg tcccattggt
     2041 tgtcctggag cgcctcctcg gccaggaagg cgttgaagaa cgggtcgcgc ttgcgcacct
     2101 ccagcccccg ctcccggtag acctgggcct cgacatcgcg cccctgggcc cggagcaggt
     2161 tctccaggtt gccgcagggc gcgccgtccc tgggatccat ctcaatggcc ttcaggaagg
     2221 acttctccgc ctcggcttca tgtccctggt tgcgctgcac caccccgagg atgttccagc
     2281 ccacgcccag ggagggatcc acctggatgg attcattggc ctcggccatg gcctcgggat
     2341 acttggattc cgccagaagc tccaccgccc ggttgctgtg gaagagggcc cgcacgcgct
     2401 tgagctccag gatcgcgatg agctgcgaat cccggcggat ctccgggagg aaatccgcca
     2461 ccagctcctg gccgatgctg cccacaggga ccacc
//
LOCUS       DATGWW010000122         2086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_321066, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000122 DATGWW010000000
VERSION     DATGWW010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321066"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1427)
                     /locus_tag="VK150_01790"
     CDS             complement(<1..1427)
                     /locus_tag="VK150_01790"
                     /inference="COORDINATES: protein motif:HMM:NF012973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA];
                     GO_process: GO:0071978 - bacterial-type
                     flagellum-dependent swarming motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HLP30061.1"
                     /translation="MLTFLDRLLPYMGRLARRADLAAPVFVMVVLVVMVLPLPAFALD
                     LLIVLNITLSLVILMVGMYVRRPKEFSSYPSVLLVVTLFRLAINVATTRRILLYAGDQ
                     GADAAGHMVKAFGQFVVGGSYVIGLVVFLILLAIQFLVINHGAGRIAEVTARFTLDAM
                     PGKQMAIDADLNAGYIDEQEARRRRKDLQEEAGFYGAMDGAVKFTQRDAVAALIILAV
                     NIVAGIILGVVQYNLPVVQALEVYTLLTVGDGLVTVIPSLLISVGGAILTTRSGADAS
                     GLGSEVVGQLGADHRPLAIAASVLFLFGAVPGLPLFPFWVMASIFTVMAYAAWKLPKV
                     IPTPAEEHAAAEKAKAAAAESADRVEGLLKVDPLGLEVGYSLIPLLDVNQGGTVLERI
                     KAVRRQMAQELGIVVPPVRIRDNLQLPPLTYRILLRGEEIARAELQPSQFLAMNPGTA
                     TEDLAGTPTSEPAFGLPAYWIPDTQR"
     gene            1520..1966
                     /locus_tag="VK150_01795"
     CDS             1520..1966
                     /locus_tag="VK150_01795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30062.1"
                     /translation="MTVLRHTMLLAAPPSAVHPLLCPVRERDWIEGWSATVLRSASGW
                     AEPGCVFTTPGLEGPDWLWVVAVHQPDRIRFTVHAPGSHATLLDLDLAAEGGGTRLAW
                     TYDLVPLSPIGEAYIQGYAVRFPAALALLERRLVHFLTTGTMLRTD"
BASE COUNT          329 a          726 c          728 g          303 t
ORIGIN      
        1 cgctgggtgt cgggaatcca gtaggcgggc aggccgaagg cgggctcgga ggtgggggtg
       61 ccggccaggt cctccgtggc ggtgccggga ttcatggcca ggaactggga aggctgcagc
      121 tccgcccggg cgatctcctc gccccggagc aggatgcggt acgtgagcgg cggcagctgc
      181 aggttgtccc ggatgcggac cggcggcacc acgatgccca gctcctgggc catctggcgc
      241 cggacggcct tgatgcgctc cagcaccgtg ccgccctggt tcacgtccag cagggggatg
      301 aggctgtagc ccacctccag gcccagggga tccaccttga gcagcccctc gacccggtcg
      361 gccgattccg cggcggcggc cttggccttc tccgcggcgg catgctcctc ggcgggggtg
      421 gggatgacct tgggcagctt ccaggccgcg taggccatga cggtgaagat ggacgccatc
      481 acccagaagg ggaacagggg cagccccggc accgccccga agaggaagag cacggaggcg
      541 gcgatggcca gggggcggtg gtcggcgccc agctggccca cgacctcgct gcccaggccg
      601 gaggcgtcgg cgccgctgcg ggtggtgagg atggcgccgc ccacgctgat gagcaggctg
      661 gggatcaccg tcaccaggcc gtcgcccacg gtgaggaggg tgtagacctc cagggcctgc
      721 acgacgggca ggttgtactg gaccacgccc aggatgatgc ccgccacgat gttgacggcc
      781 aggatgatca gggccgccac ggcgtcccgc tgggtgaact tcaccgcgcc gtccatggcg
      841 ccgtagaagc cggcctcctc ctggaggtcc ttgcgtcggc gccgggcttc ctgctcgtcg
      901 atgtagcccg cgttcaggtc ggcgtcgatg gccatctgct tgccgggcat ggcgtccagg
      961 gtgaaccggg cggtcacttc cgcgatgcgg ccggcgccgt ggttgatcac caggaactgg
     1021 atggccagca ggatgaggaa gaccaccagg ccgatcacat agctgccgcc caccacgaac
     1081 tggccgaagg ccttcaccat gtgtccggcg gcatccgccc cctggtcgcc ggcgtagagc
     1141 agaatccgcc gggtggtggc cacgttgatg gccagacgga aaagcgtcac caccagcagc
     1201 accgaggggt acgagctgaa ctccttgggg cggcggacat acatgcccac catcaggatc
     1261 accaggctca gggtgatgtt caggacgatg agcagatcca gcgcaaaggc cggcaggggc
     1321 agcaccatca ccaccaggac gaccatcacg aacacgggcg cagccaggtc cgcccgcctc
     1381 gccaggcggc ccatatacgg aagcagacgg tccaggaagg tcaacatacc gacacccggg
     1441 gggttcgggg cgagggccgt gccacaaacc ccttgaaccg atcacggctt cacatcggag
     1501 gctggactgg gaggttccca tgaccgttct ccgtcacacc atgctcctgg ccgccccgcc
     1561 ctcggccgtc catcccctgc tgtgcccagt ccgggagcgc gactggatcg aaggctggtc
     1621 ggccaccgtc ctccgctccg ccagcggttg ggccgagccg ggctgcgtgt tcaccacccc
     1681 ggggctggag ggccccgact ggctctgggt tgtcgccgtc caccagccgg accgcatccg
     1741 gttcacggtc cacgccccgg gttcccacgc cacgctgctg gatctggacc tggccgcgga
     1801 aggcggcgga acccgtctgg cgtggaccta cgacctggtg cccctcagcc ccattggcga
     1861 ggcctacatc cagggatacg cggtgcgctt cccggcggcc ctggcgctgc tggagcgccg
     1921 gctggtccat ttcctgacaa cgggtaccat gctccggacg gactgacatg ctcaccatca
     1981 gcgccctggc ccggcggttc ggcctttccc gcagcgccct gctgcactac gaccgcattg
     2041 gcctgctgcg gcccagcggc cggtccgcca aggatcaccg ccgcta
//
LOCUS       DATGWW010000123         3448 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_417236, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000123 DATGWW010000000
VERSION     DATGWW010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3448
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417236"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..225
                     /locus_tag="VK150_01800"
     CDS             <1..225
                     /locus_tag="VK150_01800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30063.1"
                     /translation="ANGKDYFRVCFIGSVPEGADALPEDPDILRCHWLTPAELAAAPL
                     RSGWVLRCLQDALAGRRFPLDLVADIRLER"
     gene            complement(228..704)
                     /locus_tag="VK150_01805"
     CDS             complement(228..704)
                     /locus_tag="VK150_01805"
                     /inference="COORDINATES: protein motif:HMM:NF025227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4199 domain-containing protein"
                     /protein_id="HLP30064.1"
                     /translation="MPPTLRAGLILGLSVAAWTFVMGVTGWYRHPSLHRLFWLVIPLQ
                     IGLLVWALRGLAPVSGFGRQVWNGVSISVLASLIIFGASILFTTVVFPHYFQDLEALG
                     RQMMARQGLSPEQIETAVRLQAPLQTPRASAMAGAIGTVVTGFLTSVVAAIWLRKK"
     gene            complement(730..1239)
                     /locus_tag="VK150_01810"
     CDS             complement(730..1239)
                     /locus_tag="VK150_01810"
                     /inference="COORDINATES: protein motif:HMM:NF016840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HLP30065.1"
                     /translation="MTSITAHLLVLFRRDLRCLMREVEAFPDDATLWRTLPGIANSAG
                     NLALHVTGNLRHFVGAVLGGTGYVRHRDLEFSTREGTRAEVVAGLEAALAEVEACLPA
                     LRAEALAAPYPVAVSGHRPTTGLLLVHLETHLAFHLGQAGYLRRALTGVAGATEPMGI
                     PDDGGAAGV"
     gene            1283..2194
                     /locus_tag="VK150_01815"
     CDS             1283..2194
                     /locus_tag="VK150_01815"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF002133.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004359 - glutaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase"
                     /protein_id="HLP30066.1"
                     /translation="MDLQALLDDLARESAPFSAEGNVADYIPALAAVDPSRFGIALVT
                     MDGALIGSGDWRVPFSIQSVSKAFSLALVLARDGEALWKRVGREPSGNPFNSLVQLEY
                     EKGIPRNPFINAGALILIDRLLSLTGDSLGTLRDFLRTESGRPDVDLDPEVAASEAAH
                     GHRNAALAHFMASCGNLENPVERVLDHYFRQCALTMSCADLAKAGLFLANHGLRADGS
                     RLLTRSEAKRINAVMLTCGTYDAAGDFAYRVGLPGKSGVGGGILAVLPERGVLCVWSP
                     ALDRHGNSVAGVEALDRFTTRTGWSVF"
     gene            complement(2239..2568)
                     /locus_tag="VK150_01820"
     CDS             complement(2239..2568)
                     /locus_tag="VK150_01820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30067.1"
                     /translation="MFVLRRLPAALALLMLGALSLRLGLPFQAAVPAALALTVLLFVP
                     RVLLQTTLAALLWAGALAWVGMAWLRVQERLAEGLPWLRLAAILGAVTLFTAWAAWLL
                     HPRKTEG"
     gene            complement(2617..>3448)
                     /gene="rlmF"
                     /locus_tag="VK150_01825"
     CDS             complement(2617..>3448)
                     /gene="rlmF"
                     /locus_tag="VK150_01825"
                     /EC_number="2.1.1.181"
                     /inference="COORDINATES: protein motif:HMM:NF017755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008988 - rRNA
                     (adenine-N6-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="23S rRNA (adenine(1618)-N(6))-methyltransferase
                     RlmF"
                     /protein_id="HLP30068.1"
                     /translation="APHGGATIPFADAMAVKALNRALLQEAYGIRGWDIPEGYLCPPI
                     PGRADYLHHLADLLAEGNGGVIPRGATVHVLDVGVGANAIYPLIGHSEYGWTFVGTEV
                     DAAALASAARILAANPAFGQALALRRQTEPGAIFAGVVLPEERFDLTLCNPPFHASRW
                     AAREAAQEKWRKLGRGASAGRNFGGQGAELWCEGGEVGFTLHMIEESRALAPRVRWFT
                     TLLSSSASLPAVHRALRHAGATEIRTVPMAQGQKQSRFVAWTFLDPEAREGWRIRWGA
                     "
BASE COUNT          520 a         1195 c         1281 g          452 t
ORIGIN      
        1 gccaacggga aggactactt ccgggtgtgt ttcatcggct cggtgcctga gggcgcggac
       61 gcactcccgg aggatccgga catcctccgc tgccactggc tcacccccgc ggagctcgcc
      121 gcggcgccgc tgcgttcggg ctgggtgctg cggtgcctgc aggacgccct cgcgggccgc
      181 cggttcccgc tggacctggt ggccgacatt cgcctggagc gttgagccta tttcttgcgg
      241 agccagatcg ccgcgacgac ggaggtgagg aagccggtga ccacggtgcc gatggcgccg
      301 gccatggcgc tggcgcgggg cgtctgcagg ggcgcctgga ggcgcacggc ggtctcgatc
      361 tgttccgggc tcaggccctg ccgggccatc atctggcggc ccagggcctc caggtcctgg
      421 aagtagtgcg ggaacaccac cgtggtgaag aggatgctgg cgccgaagat gatcagcgag
      481 gccagcaccg agatgctcac gccgttccac acctggcgtc cgaagccgga gaccggggcc
      541 agccctcgca gggcccagac caggaggccg atctggaggg ggatcaccag ccagaagagg
      601 cggtgcaggg agggatgcct gtaccagccc gtgacaccca tgacgaaggt ccaggcggcc
      661 acggagaggc cgaggatcag gccggcgcga agggtggggg gcatgggcac ctcgggaggg
      721 accaggggat cataccccgg cggcgccgcc gtcgtcgggg atccccatgg gctcggtggc
      781 gccggccacg ccggtgaggg cgcggcgcag gtagcccgcc tgtcccaggt ggaaagccag
      841 gtgggtttcg agatgcacca gcaacaggcc cgtggtgggg cggtggccgc tcacggccac
      901 gggatagggc gccgccaggg cctcggcgcg gagggccgga aggcaggcct ccacctcggc
      961 cagggccgcc tcgaggcccg ccaccacctc ggcgcgggtg ccctcccgcg tcgagaattc
     1021 caggtcgcga tgccggacgt agccggtgcc gcccagcacg gcgcccacga aatgccgcag
     1081 gttcccggtg acgtgcaggg cgaggttgcc ggcgctgttg gcgatgccgg gcagggtgcg
     1141 ccagagggtg gcgtcgtcgg ggaaggcttc gacctcccgc atgaggcagc ggaggtcgcg
     1201 gcggaacaga accaggaggt gggcggtgat ggaggtcatg gcgtccatcc taaacccacg
     1261 ggccttgtgg gatgctcatg gcatggacct tcaagcgctc ctcgacgacc tcgcccggga
     1321 atccgcgccc ttctccgcgg aggggaacgt ggcggactac atccccgccc tggcggccgt
     1381 ggatccgtcc cgcttcggca tcgccctggt caccatggat ggcgccctga tcggcagcgg
     1441 ggactggcgg gtgcccttct ccatccagag cgtctccaag gccttctcgc tggccctggt
     1501 gctggcccgg gacggcgagg ccctgtggaa gcgcgtgggc cgagagccct cgggcaaccc
     1561 cttcaattcg ctggtgcagc tcgaatacga gaagggcatt ccaaggaatc ccttcatcaa
     1621 cgccggggcc ttgatcctca ttgaccgcct gctcagcctc acgggagact ccctgggcac
     1681 cctgcgggat ttcctgcgca cggagagcgg gcggcccgac gtggacctgg atccggaggt
     1741 ggcggcttcg gaggccgccc acggacaccg caacgcggcc ctcgcccact tcatggccag
     1801 ctgcggcaac ctggagaacc cggtggagcg cgtgctcgac cactacttcc gccagtgcgc
     1861 gctcaccatg agctgcgccg acctggcgaa ggcgggcctc ttcctggcca accacggcct
     1921 gcgggccgac ggctcgcggc tgctgacccg cagcgaagcc aagcgcatca acgcggtcat
     1981 gctcacctgc ggcacctacg atgccgccgg cgacttcgcg taccgcgtgg gcctgccagg
     2041 caagagcggc gtgggcggcg gcatcctggc ggtgctgccc gagcggggcg tgctctgcgt
     2101 ctggagccca gccctggacc gccacggcaa cagcgtggcc ggcgtggagg cgctggatcg
     2161 cttcacgacg cgaacaggct ggtcggtgtt ctgatcacga gcgagccccg gatggtggaa
     2221 cccgaaccgg atggaggctc agccttccgt cttccgcgga tgcagaagcc aggccgccca
     2281 ggcggtgaag agggtcacgg cgccgagaat cgcggccagg cgcagccagg gcaacccttc
     2341 ggcgaggcgc tcctgcaccc gcagccaggc catgcccacc caggcgaggg ctccggccca
     2401 gagcagggcg gccagggttg tctggaggag gacccgtggg acgaacagca gcaccgtcag
     2461 cgcgagggcc gcgggcacgg ccgcctggaa gggcaggccc aggcgcaggg acagcgcccc
     2521 cagcatgagc agggccaggg cggcgggcag gcggcgaagg acgaacatgg aggctccggc
     2581 gacgggacat cataccgggc cccctggatc gctggattac gcgccccagc ggatccgcca
     2641 gccctcccgc gcctccggat ccaggaaggt ccaggccacg aagcggctct gcttctggcc
     2701 ctgggccatg ggcacggtgc ggatctccgt ggcgccggca tggcgcaggg cccggtgcac
     2761 ggccggcagg ctcgcggagc tcgacagcag cgtggtgaac cagcgcaccc gcggggcgag
     2821 ggcccggctc tcctcgatca tgtgcagcgt gaagcccacc tcgcccccct cgcaccacag
     2881 ctccgccccc tggccgccga agttccggcc cgcgctggcg ccgcggccca gcttccgcca
     2941 tttctcctgg gccgcttccc gcgccgccca ccgggaagcg tggaagggtg gattgcacaa
     3001 ggtgaggtcg aagcgctcct ccggcagcac gacgcccgcg aagatggccc cgggctcggt
     3061 ctgccggcgc agggccaggg cctggccgaa cgctgggttc gccgccagga tgcgggcggc
     3121 ggaggccagg gccgcggcgt ccacctccgt gcccacgaag gtccacccgt attcggagtg
     3181 accgatcagc gggtagatcg cgttggcgcc cacgcccacg tccagcacat gcaccgtagc
     3241 gccccgggga atgacacccc cgttgccctc ggccagcagg tcggccaggt ggtgcaggta
     3301 gtcggcccgg ccggggatgg gcgggcagag gtagccctcg gggatgtccc agccgcggat
     3361 gccgtaggcc tcctgcagca gggcccggtt cagggccttc accgccatgg cgtcggcgaa
     3421 ggggatggtg gcgccgccgt ggggcgcc
//
LOCUS       DATGWW010000124         1834 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_99820, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000124 DATGWW010000000
VERSION     DATGWW010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1834
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99820"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1536)
                     /locus_tag="VK150_01830"
     CDS             complement(<1..1536)
                     /locus_tag="VK150_01830"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HLP30069.1"
                     /translation="MRLSLPIDPLLPQIVEGLRGNPNLVLQADPGAGKTTRVPPALLE
                     SGLLGEGECWILEPRRLAARLAATRVAEELGEPLGQRAGYAVRFEQKVSKATRLRFVT
                     EGLLLRRLHGDPALRGITAVVLDEFHERHLHTDLGITLLRRLQREARPDLKLLVMSAT
                     LDPGPVAAYLDAPVLRSEGRAFPVETSFLARPDDRPVEQQVGDALERLYRDGLRDHTL
                     VFLPGAAEIRACMKGCEAVAARHGLSLRPLHGELSPEAQAHALERTDAPKVILSTNVA
                     ESSVTLDGIGAVVDSGLGREASHSPWSGLSGLRTVRISQARCVQRTGRAGRTGPGRCL
                     RLYTEADFGARPAFDTPELQRSDLAEPWLTLHGMGIAEPRGLEWFEAPPEAAIAAAEA
                     LLMRLEALEGGGLSAVGRRMADLPLHPRLARLAIAGQDLDIPQLALRAAALLEAGSLS
                     LRQGLDRSPVKTGHGADSDLLLRLDQFEEAEAAGFSAGACRAAGLDGAAVSRARRAVQ
                     SLGR"
     gene            complement(1527..>1834)
                     /locus_tag="VK150_01835"
     CDS             complement(1527..>1834)
                     /locus_tag="VK150_01835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30070.1"
                     /translation="PHRIREGSLELHLGLVKSATVPVDHILSASPLPEFEDDWARHAH
                     MKDVPSLVAKGNAILELKLSEPIRVTGLLGPGRPTQRLAVSVDDPAAFLAALGQPCA"
BASE COUNT          251 a          635 c          712 g          236 t
ORIGIN      
        1 ccgccccagg gattgcacgg cccgacgggc ccgggacacg gcggcgccgt ccagtcccgc
       61 ggcccggcag gccccggcgc tgaaacccgc ggcttcggcc tcctcgaact ggtccaggcg
      121 cagcagcagg tccgagtccg cgccgtggcc cgtcttcacc ggcgagcggt ccaggccctg
      181 ccgcagggag aggctgcccg cctccagcag ggcggcggcg cgcagcgcca gctgggggat
      241 gtccaggtcc tggcccgcga tggcgagccg tgccagccgc gggtgcaggg gcaggtccgc
      301 catgcgccgg cccacggcgc tgaggcctcc gccttccagg gcttccagcc gcatgagcag
      361 cgcttccgcc gccgcgatgg ccgcttcggg cggcgcctcg aaccattcca ggccccgggg
      421 ctcggcgatg cccatgccgt gcagggtgag ccagggttcg gccagatccg accgctgcag
      481 ctctggcgtg tcaaaggcgg ggcgcgcgcc aaagtcggcc tcggtgtaga ggcgcaggca
      541 gcggcccggc cccgtgcggc ccgcccggcc cgtgcgctgc acgcaccggg cctggctgat
      601 gcgcactgtg cgcaggcccg agagccctga ccagggcgag tgcgaggcct cccgacccag
      661 gcccgaatcc accacggcgc cgatgccatc cagggtgacg gagctctcgg ccacgttggt
      721 gctgaggatc accttggggg cgtcggtgcg ttccagggcg tgggcctggg cttccgggga
      781 cagttcgccg tgcagcgggc gcaggctcag gccgtgccgg gcggccacgg cctcgcagcc
      841 cttcatgcag gcgcggatct cggcggcgcc gggcaggaag accagggtgt ggtcgcgcag
      901 cccgtcgcgg tagaggcgct ccaacgcgtc gcccacctgc tgctccacgg gacggtcgtc
      961 gggacgggcc aggaaactgg tctccaccgg gaaggcgcgg ccctcgcttc tcaacacggg
     1021 ggcgtctagg taggcggcca cggggccggg atccagggtg gcggacatga cgagcagctt
     1081 caggtcgggc cgcgcctcgc gctgcaggcg acgcagcagg gtgatgccga ggtccgtgtg
     1141 caggtgccgt tcgtggaatt cgtcgagcac caccgcggtg atgccgcgca gggccgggtc
     1201 cccgtggagg cggcgaagga gcaggccttc cgtgacgaag cgcaggcgcg tggccttgga
     1261 gaccttctgc tcgaagcgca ccgcgtagcc cgcccgctgg cccagaggct cgcccagttc
     1321 ctcggccacg cgggtggcgg cgaggcgtgc ggcgaggcgg cggggctcaa gaatccagca
     1381 ctcgccctcc cccagcaggc cggattccag gagagctggc ggcacgcggg tggtcttgcc
     1441 ggcgccggga tcggcctgga ggaccaggtt cggattgccg cgcaggccct cgacgatctg
     1501 gggcagaagg ggatcaatgg gcaggctcag gcgcatggct ggcccagggc cgcgaggaag
     1561 gcggcaggat catccacgga gacggccagg cgctgtgtcg gccggcccgg acccagcagg
     1621 cccgtgaccc ggatgggctc cgagagcttc agctcaagaa tggcattccc cttggccacc
     1681 aggctcggca cgtccttcat gtgggcgtgg cgggcccagt cgtcctcgaa ttccggaagg
     1741 ggtgaggcgg agaggatgtg gtccacggga acggtggccg acttcacgag gcccaggtgg
     1801 agctcgaggc tgccctcgcg gatccggtgg gggc
//
LOCUS       DATGWW010000125         2264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_417482, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000125 DATGWW010000000
VERSION     DATGWW010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417482"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1107
                     /locus_tag="VK150_01840"
     CDS             <1..1107
                     /locus_tag="VK150_01840"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HLP30071.1"
                     /translation="GAIQCVGSGKPILDEGGVLKGAVLFVNPIIKIKRLINRFIGAQA
                     TFRFEDVLGHGEVLRKAVQLGHLASGNESNVLLMGESGTGKEMFAQAIHNQSERRQGP
                     FVAVNCGAIPRELIASELFGYSEGAFTGGVRGGRPGKFELASGGTLFLDEIGDMPLEQ
                     QIALLRVLQDRTITRIGGDRSFVVDVRIICATNKDLREEIQRGTFRQDLFYRLNVTMI
                     KLPALREHPEDIPGLLEAFVHQFASAKGKADLRIAPDVIGHLQGYAWPGNIREFQNVV
                     ERMVHAIEGTVMGPEHIPEEILRPAERAGPRPGPGSPSASQAPVTLRDLLAEEEAAEI
                     RTCLRACRGNVTKAAKELGMARNTLYRKLEKIGV"
     gene            complement(1118..1600)
                     /locus_tag="VK150_01845"
     CDS             complement(1118..1600)
                     /locus_tag="VK150_01845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30072.1"
                     /translation="MTPLDAFRAHLGPLTWDDLVTGYDFGFLAMADIQAEAPGDGPAV
                     QRLRDLAGPALATFEAHLWAACTEAVGKTPRPGSTRWSSAQDRWREALLREALAAEST
                     PRQLARRVERLYEQVGCPEDMLAMLRPSQAWSGIPATVDPTAVQRFLERAQHGARRPL
                     "
     gene            complement(1609..>2264)
                     /locus_tag="VK150_01850"
     CDS             complement(1609..>2264)
                     /locus_tag="VK150_01850"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HLP30073.1"
                     /translation="PFSLQEALETVQATVGAWAMTGCRTLLLGGDHSLTLGALRALAL
                     QHGPLGLLHIDAHPDAAQGATWGTEIHHGTWLRQALEENLVDPERVVQAGLRAPRHDD
                     EELAFLQAAGVRMWTPADLRDPLLALQLKEDLGSVGRGPAYLSLDLDALDPILVPAVA
                     EPVPGGLSLAETLRLLHAARLWPEPWVGADLMELAPTLEGAEGSARVAVHLALHLLA"
BASE COUNT          348 a          787 c          839 g          290 t
ORIGIN      
        1 ggcgccatcc agtgcgtggg cagcggcaag cccatcctgg acgagggcgg cgtcctcaag
       61 ggcgccgtgc tcttcgtgaa tcccatcatc aagatcaagc ggctcatcaa ccgcttcatc
      121 ggggcccagg ccaccttccg cttcgaggac gtgctgggcc acggcgaggt gctccggaag
      181 gccgtgcagc tggggcatct ggcctccggg aacgaaagca acgtcctgct gatgggggag
      241 agcggcaccg gcaaggagat gttcgcccag gccatccaca accagtccga gcggcggcag
      301 gggcccttcg tggccgtgaa ctgcggcgcc atcccgcggg agctcatcgc cagcgagctg
      361 ttcggctaca gcgagggcgc cttcaccggc ggcgtccgcg gcggacgccc cgggaagttc
      421 gagctggcca gcggcggcac cctcttcctc gacgagatcg gcgacatgcc gctggaacag
      481 cagatcgccc tgctgcgcgt gctgcaggac cgcaccatca cccgcatcgg cggcgaccgc
      541 tccttcgtgg tggacgtgcg gatcatctgc gccacgaaca aggacctgcg cgaagagatc
      601 cagcggggca ccttccggca ggacctcttc taccggctca acgtcaccat gatcaagctg
      661 ccggcgctgc gggagcatcc agaggacatc cccggactgc tggaggcctt cgtccatcaa
      721 ttcgcttctg ccaaagggaa ggcggacctg cgcatcgccc cggacgtgat cggccacctc
      781 cagggctacg cctggcccgg caacatccgg gaattccaga acgtggtgga gcgcatggtc
      841 cacgccatcg aggggacggt gatgggcccc gagcacatcc ccgaggagat cctgcggccc
      901 gccgaacggg ctgggcctcg gccagggcca ggctcaccgt ccgccagtca ggcgcccgtg
      961 acgctgcgcg accttctggc agaggaggag gcggccgaga tccggacctg cctgcgggcc
     1021 tgcaggggca acgtgaccaa ggccgcgaag gaactgggga tggcgcgcaa caccctctac
     1081 cgcaaactcg agaagatcgg cgtctgagcc aggccgctca cagcgggcgc cgggctccgt
     1141 gctgcgcgcg ttccaggaat cgctgcaccg ccgtcggatc gaccgtggcc gggatgccgg
     1201 accaagcctg ggagggccgc agcatggcca gcatgtcctc ggggcagccc acctgttcgt
     1261 agagccgctc cacgcggcgg gccagctgtc gcggcgtgct ctcggcggcc agggcctcgc
     1321 gcagcagcgc ctcccgccag cggtcctggg cgctcgacca gcgggtgctg ccgggccggg
     1381 gcgtcttgcc caccgcctcg gtgcaggcgg cccagaggtg cgcctcgaag gtggcgaggg
     1441 ccggtcccgc caagtcccgc aggcgctgga cggcggggcc gtcccccggg gcttccgcct
     1501 ggatgtcggc catggcgagg aagccgaagt cgtagccggt gacgaggtca tcccaggtga
     1561 gggggccgag gtgggcgcgg aaggcgtcga ggggcgtcat gggaagcctc aggcgaggag
     1621 gtggagggcg aggtggacgg cgacccgggc gctgccttcg gccccttcca gcgtgggggc
     1681 cagctccatg aggtcggcgc ccacccaggg ctcgggccac agccgcgcgg cgtggagcag
     1741 ccgcagggtc tcggccaggc tcaggccgcc gggcacgggc tcggccacgg cgggcacgag
     1801 gatcggatcc agggcgtcca ggtccaggct caggtacgcc gggccccggc ccacggagcc
     1861 cagatcctcc ttgagctgca gggcgaggag gggatcgcgc aggtccgcgg gcgtccacat
     1921 gcgcacgccc gccgcctgca ggaaggccag ctcctcgtcg tcgtgccggg gggcccgcag
     1981 gcccgcctgc accacgcgct cggggtccac caggttctcc tccagcgcct ggcgcagcca
     2041 ggtgccgtgg tggatctccg taccccaggt cgcgccctgg gccgcgtccg gatgggcatc
     2101 gatgtgcagg aggcccaggg ggccgtgctg aagggccagg gcccgcaggg cgcccagggt
     2161 gagcgagtgg tcgccgccca gcaacagggt gcggcagccg gtcatggccc aggcgccgac
     2221 ggtggcctgg acggtctcca gagcctcctg cagggagaaa ggca
//
LOCUS       DATGWW010000126         4120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_186145, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000126 DATGWW010000000
VERSION     DATGWW010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4120
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186145"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..418
                     /locus_tag="VK150_01855"
     CDS             <1..418
                     /locus_tag="VK150_01855"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLP30074.1"
                     /translation="YNMSIAVWVGLIALMGLDAETGVFMLLFLDLSHDEARKEGRLKT
                     TADLVEAIIHGAVKRVRPKAMTVFAAFMGLLPIMWSTGTGADVMKRIAAPMVGGLATS
                     FLLELLVYPAIYYLWKRKEVVEGPLTEASPSALSPA"
     gene            455..697
                     /locus_tag="VK150_01860"
     CDS             455..697
                     /locus_tag="VK150_01860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30075.1"
                     /translation="MLTSLLAPLFTATLLAAPGGKPATNTTCPVLGGKVTEKSKTVTV
                     RGREYRICCGGCDTKLLKNPDTYLDKDGTPKNVKKS"
     gene            complement(760..1941)
                     /locus_tag="VK150_01865"
     CDS             complement(760..1941)
                     /locus_tag="VK150_01865"
                     /inference="COORDINATES: protein motif:HMM:TIGR01891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HLP30076.1"
                     /translation="MNPSATMIASIMDDLIRTRKALHRIPEVGFQENKTAAYVADDLE
                     SLDLEVTRGVAGTGVIALLRGDHAGPTLALRACLDALAMTECSGVDYASEHPGAFHGC
                     GHDGNMAFVLGAAKVLARCREQLHGNVKFMFQPSEEETGGAAALIRAGALKRPDVDAI
                     VHLHNWHDLGAGVIAIKAGPVLASSDTFRIEIIGSPGHGAWPHLAVDPVVVAAEVVTA
                     LQRILSREIDPLKPALLTLGRIHGGTAVNIIPESVVIEGLARAYHPEVRDHLQTRIGE
                     VVEGVTRAARATHQTIYNRIMPPVTNDGKLAAWAARTLGALPEPAIRLTEATPGGMGA
                     EDFSLYQQEVPGLFLFIGKDEPGREVIPIHAPNYIFNDNTLGTGVRALCALALGFCRR
                     T"
     gene            2104..3549
                     /locus_tag="VK150_01870"
     CDS             2104..3549
                     /locus_tag="VK150_01870"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HLP30077.1"
                     /translation="MTPRTGDPLYLALASDLRSAMEEGRLAPGARLPSIRESARLRRL
                     SVNTVLAAYRLLETRGLVEARPHSGYFVKAQLPRTQGKPLGQARRAREPELAVLDQIT
                     AVIAAQALPGNVDLSLACPRLGPWYPGAKLGRITSRLLQQRPELITTYSLPPGPPLLR
                     HQVARHAQALGMKLEPDRVVLTNGCLEALQIALRGVTRPGDAVGIESPTYFSLLPLLA
                     DLGLKARELPTHPETGLVLDKFEALLCEKRLAAAIVMPNLHNPMGTVMPLTAKKRLAA
                     LVNAHQVPLIEDSIYAELQFRTPLEPAVRAFDADGWVIVCSSFSKTLAPGFRLGWLEG
                     GRFHRELAQIKFASSVAQPALLAEAVGVFMESGGYEAHLRHLRRAYAIQMDRLRGLVS
                     DHFPAGTRATSPAGGYLLWVELPEGCSAQQLFQRALAERITVTPGNLFSPSGHYDRYL
                     RLSACYPLEGPFTQALSVLGRLAGEQLAGAR"
     gene            3593..3832
                     /locus_tag="VK150_01875"
     CDS             3593..3832
                     /locus_tag="VK150_01875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YHS domain-containing protein"
                     /protein_id="HLP30078.1"
                     /translation="MFFAPLLTLAVLAAPAAEKAKPATNTKDPVCKMTVDAKSTTVAV
                     RGQEYRVCSKHCAAALQKDPDKYLEKDGSLKGAKK"
     gene            complement(3813..>4120)
                     /locus_tag="VK150_01880"
     CDS             complement(3813..>4120)
                     /locus_tag="VK150_01880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30079.1"
                     /translation="AKARVRFTPVFFRWEAPEPRFQLDRELARVVLLPLAPLITAPWT
                     MERLGRQGLTLDVPRLELAMDGWAAPLWGATAFVLKAWLDVLGACDGAGTEPTSWRP"
BASE COUNT          666 a         1473 c         1309 g          672 t
ORIGIN      
        1 ctacaacatg agcatcgccg tgtgggtggg cctcatcgcc ctcatgggcc tcgacgcgga
       61 aaccggcgtc ttcatgctgc tcttcctcga cctgagccac gacgaggccc ggaaggaggg
      121 ccgcctgaag accacggccg acctggtgga agccatcatc cacggggctg tgaagcgcgt
      181 gcggcccaag gccatgaccg tcttcgcggc cttcatgggc ctgctgccca tcatgtggag
      241 cacgggcacc ggcgccgatg tcatgaagcg catcgcggcg cccatggtgg gcggcctcgc
      301 caccagcttc ctcctggagc tcctcgtcta cccggccatc tactacctct ggaagcgcaa
      361 ggaggtggtc gaaggccccc tcaccgaagc ctccccgtcc gctctctccc cggcctgatt
      421 cggcctttcc tctcaccgtt tccaaggagc ctctgtgttg acctccctgc tcgccccgct
      481 cttcaccgcg acccttctcg ccgcgcccgg cggaaagccc gccaccaaca ccacctgccc
      541 ggtcttgggc ggcaaggtga ccgagaaatc gaagactgtg actgtccgcg gccgcgagta
      601 ccgcatctgc tgcggcggtt gcgacaccaa gctgctgaag aaccccgaca cgtacctcga
      661 caaggacggc actccgaaga acgtgaagaa gtcttaggca tgtcgcccgg agcacccgcg
      721 gccagcggcc gcgggtgctc cgccaggatc cagatggatt caggtccttc ggcaaaaacc
      781 cagcgccagg gcgcagaggg ccctcacccc cgtcccaagg gtgttgtcgt tgaagatgta
      841 gttgggcgca tggatgggga tgacctccct cccaggttca tccttgccga tgaagaggaa
      901 gagtccgggg acctcctgct ggtacaggga gaaatcctcc gcgcccatgc cgccaggcgt
      961 ggcctcggtg agcctgatcg ccggctccgg cagtgcgccc agggtccggg ccgcccaggc
     1021 cgcgagtttt ccgtcgttgg tcacaggcgg catgatccgg ttgtagatgg tctgatgggt
     1081 cgcccgggcc gcgcgggtga ccccttcgac gacttccccg atgcgggtct ggaggtggtc
     1141 ccggacttcg gggtggtagg cccgcgccag cccctcgatg acaacggatt ccggaatgat
     1201 attcacggcc gtgccgccat ggatccggcc gagggtcagc agggccggtt tcaagggatc
     1261 gatttcgcgg ctcaggattc gctggagcgc cgtgaccacc tcggcggcga ccaccacggg
     1321 atccaccgcc aggtgcggcc aggcgccgtg gccggggctt ccgatgatct cgatgcggaa
     1381 ggtgtcgctg gaagcaagca cggggccggc cttgatggcg atgacacccg cccccagatc
     1441 gtgccagttg tgcaggtgca cgatcgcgtc cacgtcgggg cgcttcaggg cgccagcccg
     1501 gatgagggcc gccgctccgc cggtttcctc ctccgagggc tggaacatga atttcacgtt
     1561 cccatgcagc tgttcccggc acctggccag caccttggcc gcaccgagca cgaaggccat
     1621 gttgccatcg tggccgcagc cgtggaacgc gcctgggtgc tcagaggcgt aatccacccc
     1681 cgaacactcg gtcatggcca gggcgtccag gcaggcgcgt agggcgaggg tcggaccggc
     1741 gtggtcgccc cggagcaagg cgatcacacc cgttccagcg acacccctgg tgacttccaa
     1801 gtccaggctc tcaaggtcgt cggccacgta cgcggccgtc ttgttctcct ggaatccgac
     1861 ttccggaatc cggtgcagag ctttccgggt gcggatcaga tcatccatga tcgaggcgat
     1921 catcgtggct gaagggttca ttggcatcct ctcctcctcc atgcgaggcg atcctaccgg
     1981 caggggatgg cgtggataca gatacacagt tgtaagaaaa gtttgggtac acttttgcct
     2041 caggccaggg ttcgaccggc cctatcctgg tgcggccttg gcggctgaac agggaggccc
     2101 tccatgacgc cccgcaccgg cgatcccctc tacctcgccc tggcctcgga cctgcgatcg
     2161 gccatggagg agggacggct cgcacctggg gcccgcctgc cgtccatccg ggaatccgcg
     2221 cgcctgcggc ggctcagcgt gaataccgtg ctcgcggcct accgtctcct ggaaacccgg
     2281 ggactggtcg aagccaggcc ccactccggg tacttcgtga aggcccagct tcccagaacc
     2341 caaggaaagc cactggggca ggcacgacgg gcccgggagc ccgagctggc ggttctggac
     2401 cagatcaccg ccgtcatcgc ggcccaggcc cttcccggca acgtggatct ttccctggcc
     2461 tgcccccggc tcggcccctg gtaccctgga gcgaagctcg gcaggatcac cagcagactc
     2521 ctccagcagc gtcctgagct gatcaccacc tattcgctgc cgccggggcc gccgctcctg
     2581 cggcaccaag tcgcccggca cgcgcaggcc cttgggatga agctggaacc ggatcgcgtc
     2641 gtcctcacca acggttgtct ggaagccctc cagatcgcgc ttcgcggagt cacccggccg
     2701 ggcgatgccg tcggcatcga atcacccacc tacttcagtc tgttgccgct cctggcggac
     2761 ctggggctca aggcccggga actccccacc catcccgaga ctggcctcgt cctggacaag
     2821 ttcgaggcgc tcctttgcga gaaacgcctg gccgccgcca tcgtcatgcc gaacctccac
     2881 aaccccatgg gcaccgtcat gcccctaacc gcgaagaaac gcctcgccgc gctggtgaat
     2941 gcccaccagg tgccgctcat cgaagattcg atctacgcgg agttgcaatt ccgcacgccc
     3001 ctggaacccg cggtgcgggc tttcgatgcg gacggctggg tgatcgtctg ctcctcgttc
     3061 agcaagacgc tggcgccggg tttccgcctg gggtggctgg agggggggcg gttccaccgg
     3121 gagctggctc agatcaagtt cgcttcgtcg gtggcccagc cggccctcct ggccgaagcc
     3181 gtcggcgtgt tcatggaatc gggtggctac gaagcgcacc tgcgccatct ccgccgggcc
     3241 tacgcgatcc agatggaccg gctgcgcggg ctggtttccg atcatttccc cgccggcacc
     3301 cgggccacct ctcccgcggg cggctacctc ctgtgggtcg aactcccgga aggctgctcc
     3361 gcccagcagc ttttccagag ggccctggcg gaaagaatca ccgtgacgcc cggcaatctt
     3421 ttttccccct ccggacacta cgaccgctac ctccgccttt ccgcctgcta cccgctggaa
     3481 ggcccgttca cgcaagcgct gtcggtcctg ggccggctgg ccggggagca gctggcgggc
     3541 gcgcgctgag cagccaggct gattacactg gagggccacc ccggaggccc ccatgttctt
     3601 cgcccccctg ctcaccctcg ccgtcctcgc cgcgcccgcc gcggagaagg cgaagcccgc
     3661 caccaacacc aaggatcccg tctgcaagat gaccgtggac gccaagtcca ccaccgtcgc
     3721 cgtgcggggt caggaatacc gcgtgtgcag caagcactgc gccgccgccc tgcagaagga
     3781 tccggacaag taccttgaga aggacggctc cctcaagggc gccaagaagt aggctccgtt
     3841 ccggcgccgt cgcaggcgcc caggacgtcc agccaggcct tgagcacgaa ggcggtggcg
     3901 ccccagaggg gagccgccca gccgtccatg gccagttcca gccgcggcac gtccagcgtc
     3961 aggccctggc ggcccaggcg ctccatcgtc cagggcgccg tgatcagcgg ggccaggggg
     4021 agcagcacca cccgcgccag ctcccggtcc agctggaagc gcggctccgg cgcctcccac
     4081 cggaagaaca ccggcgtgaa gcgcacccgg gccttggcca
//
LOCUS       DATGWW010000127         3764 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_99990, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000127 DATGWW010000000
VERSION     DATGWW010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3764
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99990"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..630)
                     /locus_tag="VK150_01885"
     CDS             complement(<1..630)
                     /locus_tag="VK150_01885"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLP30080.1"
                     /translation="MPWRPFLLALCLTTILPAEGTIRVSVSEWTTLNPLLVAQDTDTE
                     AVDLVFDRLVTLDAKGNFIPELLESWTILQGGREVVLRLRPGLTWQDGRPIEAEDVVF
                     TWKSLRLPRVRQVADTVSGVASLDDVRAEGPLTVRVRLKRPRGTLLSDLYNFIPVPRH
                     RYAVGPRPAEDPVNFLPVGSGPYRVVERATTQRIRLERWSGYRGIHPGLA"
     gene            complement(677..1246)
                     /locus_tag="VK150_01890"
     CDS             complement(677..1246)
                     /locus_tag="VK150_01890"
                     /inference="COORDINATES: protein motif:HMM:NF025946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HLP30081.1"
                     /translation="MKAALLALGTACLLAQAPVAAPAPGHLPAGPLVDARDHQPLLLG
                     PTTAKAILAHRAVFRENLATVKLTTDLQARWKAVRQPFTLVAVFGSWCGDSHYQLPGL
                     LALEAEPNPFVEVHYLGVNRDKTLDAAAWPKGCAPQKVVRVPTFFLFSTQPGGDLKLM
                     GSVVENPPRAGQSMAEALVELLEAGAKAR"
     gene            1245..1838
                     /locus_tag="VK150_01895"
     CDS             1245..1838
                     /locus_tag="VK150_01895"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HLP30082.1"
                     /translation="MGFSEVTCSLAINLTRLLKNTSLEPGAPYVKISARGRYSMQALF
                     DLAHHSHGQPVPLHVIAERQKLSLPFLEQIFNKLKKAGVVASVRGPKGGYILTRPCNQ
                     VSVGEVLRLTDSSFYAVAKQDPRAGQAALMADERMSELLWNRLSDHISAFMEKVTFAD
                     LCSETSSNTCPDCTCPEYVKDVQGQIVRGERRACGVM"
     gene            2038..2889
                     /gene="ttcA"
                     /locus_tag="VK150_01900"
     CDS             2038..2889
                     /gene="ttcA"
                     /locus_tag="VK150_01900"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF007972.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HLP30083.1"
                     /translation="MSNPCALPSLALPPTEADLATLPKLERKIARRVGETNAAYKLIE
                     AGDRILVAVSGGKDSWALLDVLERLRKRAPVAFQVEAVTVDPGFPQFNPDPIAETCER
                     LGVPHHIIPAPIDKMVRAKPEELPCIICSRLRRGVLYSFAKQHGYSKIALGHHLDDLI
                     ETLLINLFFEGRLSTMPLRLVSDDGANTVIRPLGTCEEKDLQRYAWLRGFPIVPCGCP
                     LCGCSSLESRRKQVKELIAGMESSIPRLKASMLGAMGNVKLSHLLDLNLGALHATGVD
                     EAVERLG"
     gene            complement(2886..>3764)
                     /locus_tag="VK150_01905"
     CDS             complement(2886..>3764)
                     /locus_tag="VK150_01905"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HLP30084.1"
                     /translation="LVHSESDGLPGLVVDRYAHALVLQVGTAGLEALRDLWWPILFEI
                     GKREGITAFVERSQSGRREEGLDPVNRLLKGSLAGPVTVHEGAAKLTVDLLRGQKTGF
                     FLDQRAHRLQVGSHADGCRVLNAFGYTGGFSIHAGLGGAVEVATLDISAPALDQAERD
                     WAGNGLDPACHLRMEGDAFELMRTLEPFGWDRVIVDPPAFAKQRKDVDKAFKAYKDVF
                     RLGARATAPGGMLWVFSCSQHLDRMRFQEAVWTALLEAGREARVLAHLGQPADHPYSL
                     NHPEGFYLKGLWLSLD"
BASE COUNT          625 a         1310 c         1245 g          584 t
ORIGIN      
        1 cgccagcccg gggtggatgc cccggtagcc gctccaccgc tccaggcgga tgcgctgagt
       61 cgtggcgcgt tccaccaccc ggtagggccc ggagccgacg ggcaggaaat tgaccgggtc
      121 ctccgcgggc cgcgggccga cggcgtaccg gtgccgcggc acggggatga aattgtagag
      181 gtcggagagc agggtccccc ggggccgctt caggcggacc cgcaccgtga gcgggccttc
      241 cgcccgcacg tcatcaaggc tcgccacccc ggagaccgtg tcggccacct gcctcacccg
      301 gggcagccgc agggacttcc aggtgaacac cacgtcctcc gcctcgatgg ggcggccatc
      361 ctgccaggtg agcccgggcc ggagccggag caccacctcc cggccgccct ggaggatggt
      421 ccaggattcc agcagttcgg gaatgaagtt gcccttggcg tcgagggtca ccagacggtc
      481 gaagaccaga tccactgcct ccgtgtctgt gtcctgggcg accagcaggg gattgagggt
      541 ggtccattca ctgacggaga cgcggatcgt gccttccgct ggaaggatgg tcgtcaggca
      601 caaggccagc aggaaggggc gccatggcat ggtgtccgct tcatcggtgc ctgcggggca
      661 ttcctgagta cgggcgtcag cgcgccttgg cgccggcctc caacagttcc accagcgcct
      721 cggccatgct ctgccccgcc cggggcgggt tctccaccac cgaacccatc agcttgaggt
      781 cgcctccggg ctgggtactg aagaggaaga aggtcggcac ccggaccacc ttctgcggcg
      841 cgcacccctt gggccaggca gcggcgtcga gcgtcttgtc gcggttcacc ccgaggtagt
      901 gcacctcgac gaaggggttg ggctcagcct cgagggccag caggcccggc agctggtagt
      961 ggctgtcacc gcaccacgag ccgaacaccg ccacgagggt gaagggctgg cgcacggcct
     1021 tccagcgggc ctgcaggtcg gtggtgagct tcaccgtggc caggttctcc cggaagacgg
     1081 ctcggtgggc caggatggcc ttcgcggtgg tggggcccag cagcagcggc tggtgatccc
     1141 gggcgtccac caggggcccg gcgggcaagt ggcccggggc cggggcggcg acgggggcct
     1201 gggccagcag acaggcggtt ccgagggcca gaagggctgc tttcatgggc ttctccgagg
     1261 tgacgtgtag cctcgcgata aacttgactc gtttgctcaa gaatactagc ctggaacctg
     1321 gagcgcccta cgtgaagatt tcggcccgag gcaggtacag catgcaggcc ctgttcgacc
     1381 tggcccacca cagccatggc cagccagtgc ccctgcacgt gatcgccgag cgccagaagc
     1441 tctccctgcc cttcctcgag cagatcttca acaagctgaa aaaggccggc gttgtggcca
     1501 gcgtgcgcgg gcccaagggc ggctacatcc tcacgcgccc ctgcaaccag gtgagcgtgg
     1561 gtgaggtgct gcgcctcacg gacagcagct tctacgccgt ggccaagcag gatccccggg
     1621 ccggccaggc cgccctgatg gctgacgagc gcatgagcga gctcctctgg aatcgcctgt
     1681 ccgaccacat ctccgccttc atggagaagg tcaccttcgc ggacctgtgc tcggagactt
     1741 ccagcaacac ctgccccgat tgcacctgcc ccgagtacgt caaggatgtc cagggccaga
     1801 tcgtgcgcgg cgagcgcagg gcctgcggcg tgatgtaagt cggattcaac agcttccacc
     1861 tcagcgccag atttcttttc atctcgcgta ttgccgcagg cgataccgag aagacgccaa
     1921 ggcacacaac aatggaactg cagttcttct tgggaccgcc tccagcgaca aaagacggaa
     1981 aaaacccggt gtcctggtgg tgaaagccgt gcctggtcga tttgaacgag cctccgaatg
     2041 agcaatccct gcgccctccc cagcctggcc ctgccgccca ccgaggccga cctcgcgacc
     2101 ctgccgaagc tggagcggaa gatcgcccgc cgtgtgggcg aaacgaacgc cgcctacaag
     2161 ctgatcgagg cgggcgaccg catcctggtg gccgtcagcg gcggcaagga ttcctgggcc
     2221 ctgctcgatg tcctcgaacg gctgcgaaag cgggcccccg tggccttcca ggtggaggcg
     2281 gtcacggtgg atccgggctt tccccagttc aaccccgatc ccatcgccga gacctgcgaa
     2341 cgcctcggcg tgccccacca catcatcccg gcccccatcg acaagatggt gcgcgccaag
     2401 cccgaggaac tgccctgcat catctgctcc cggctgcggc gcggggtcct ctattccttc
     2461 gccaagcagc acggctactc gaagatcgct ctgggccatc acctggatga cctgatcgaa
     2521 accctgctca tcaacctctt tttcgaaggc cgcctcagca ccatgcccct gcgcctggtg
     2581 agcgacgatg gcgccaacac cgtcatccgc cccctgggca cctgcgagga gaaggacctg
     2641 cagcgctacg cctggctgcg cggctttccc atcgtgccct gcggctgccc cctctgcggt
     2701 tgctccagcc tggagagccg ccgcaagcag gtgaaggaac tcatcgccgg catggaatcc
     2761 agcatccccc gcctcaaggc ctccatgctc ggcgccatgg gcaacgtgaa gctctcccac
     2821 ctgctggacc tcaacctcgg cgccctgcat gccacgggcg tggacgaggc ggtcgagcga
     2881 ctgggctaat ccaaactcag ccacaacccc ttgaggtaga acccctcggg gtggttcagg
     2941 ctgtacggat ggtcggcggg ctggcccagg tgcgccagca cccgggcctc gcggcccgct
     3001 tccagcaggg cggtccagac ggcttcctgg aagcgcatcc ggtcgaggtg ctggctgcag
     3061 gagaagaccc acagcatccc accgggcgcc gtggcgcggg cgccgaggcg gaagacgtcc
     3121 ttgtaggcct tgaaggcctt gtccacatcc ttgcgctgct tggcgaaggc aggaggatcg
     3181 acgatgaccc ggtcccagcc gaagggctcc agcgtgcgca tcagctcgaa ggcgtctcct
     3241 tccatccgca gatggcaggc ggggtccagc ccgttgccgg cccagtcgcg ctccgcctga
     3301 tccagggccg gggcgctgat gtccagggtg gccacctcca ccgcgccgcc cagtcccgca
     3361 tggatgctga agccgccggt gtagccgaag gcgttgagca cccggcagcc gtcggcgtgg
     3421 gagcccacct gcaggcggtg ggcccgctga tccaggaaga agccggtctt ctggccccgc
     3481 agcaggtcca ccgtgagttt cgcggcacct tcgtgcacgg tgaccgggcc tgcgaggctg
     3541 cccttcagca ggcggttcac gggatcgagt ccctcctccc ggcggcccga ctggctgcgt
     3601 tccacgaagg ccgtgatgcc ctcgcgcttg ccgatctcga agaggatggg ccaccagagg
     3661 tcacgcaggg cctcgagccc cgccgtgccc acctggagga ccagggcgtg ggcgtagcga
     3721 tccaccacca gccccggcag gccgtcggat tcgctgtgca ccag
//
LOCUS       DATGWW010000128         3671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_56009, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000128 DATGWW010000000
VERSION     DATGWW010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3671
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56009"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..637)
                     /gene="pgsA"
                     /locus_tag="VK150_01910"
     CDS             complement(68..637)
                     /gene="pgsA"
                     /locus_tag="VK150_01910"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HLP30085.1"
                     /translation="MSTSSPLTLPNALTLLRILAIPFFAIAVWYGHHWQAFILFAAAG
                     FTDLLDGLIARAFDQRSDLGAVLDPAADKMLMTTAFILLAWRTQGMTAPIPVWVAILA
                     ISRDLVISFYAFASVDRLSDSVFHPSLLGKLSTAMQLIAVSLGLLFNALGPRPWMDPF
                     LPEMYWVVAALVLASGIHYFLRATRAAAA"
     gene            727..972
                     /locus_tag="VK150_01915"
     CDS             727..972
                     /locus_tag="VK150_01915"
                     /inference="COORDINATES: protein motif:HMM:NF015956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0055072 - obsolete iron ion homeostasis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoA family protein"
                     /protein_id="HLP30086.1"
                     /translation="MTQNLSVPLSLLQPGDQGEVVLVQAQGQVRQRLLEMGFIRGARL
                     RVEKLAPLGDPMELVIKGYHLSLRREESACILVNRVA"
     gene            972..3143
                     /gene="feoB"
                     /locus_tag="VK150_01920"
     CDS             972..3143
                     /gene="feoB"
                     /locus_tag="VK150_01920"
                     /inference="COORDINATES: protein motif:HMM:TIGR00437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HLP30087.1"
                     /translation="MTLTIALAGNPNCGKTTLFNALTGARHHVGNWPGVTVERRSGTF
                     EHDGTAMEVVDLPGTYSLSARSEDERVASQFLASPEVDLVLNVLDASNLERNLYLSTQ
                     LLELGKPVAFVLNMVDDAENRGVRIDVPALELLLGGPVIPTVGNREQGITELKALLCT
                     LARGESTRCRRITVDYGHDIEGELAKLQAEICRDEKLEAAMPPRWLALQLLENNADAK
                     RAVDESHAREAIRQQLSKSFAFLEPHLGADGATLVAERRYGFAHGLVKEVATAPDEKK
                     TPTARLDAILTHRALGIPIFLGILALVYSVSFILGKIPQDWIAEAFKALSGFAEARLP
                     AGELTSLLVDGVIPGVSAVIVFVPVIMILMGCIAFLEDTGYMARAAFIMDRLMHVMGL
                     HGKSFIPLIMGSGCNVPAIQAARTIESRQDRLITMLVTPLVSCSARLQVYIVIAGTFF
                     TPFKAALAIIAMHFLGLALAVLMGRMLRSALFSGPSSPFVMELPPYRLPVLKATLIHM
                     WEKGSVFLTRAGTTIFAGATLVWFLSRYPGIANREWTLEYQQQRQAVVALHLPQAEAE
                     ERLRDLQLAHESRIVNTSLAARLGQKVEPVLRPILDPDRKRPEAWKDVIALTAGFVAK
                     EIVVSTMAVIHQASEEPKEGERLSPLQVALRDGSGLTPLTALAFMVFTLIYTPCIGTI
                     AMIRREAGSWGWAGFTVGYGLVLGWGLAWLTVTVGRALGFA"
     gene            3154..3303
                     /locus_tag="VK150_01925"
     CDS             3154..3303
                     /locus_tag="VK150_01925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30088.1"
                     /translation="MTFQTLLVTSAAGLAAAYFLRGVVQDFRQPQAGSCGKCSSGGCP
                     VARKG"
     gene            complement(3317..>3671)
                     /locus_tag="VK150_01930"
     CDS             complement(3317..>3671)
                     /locus_tag="VK150_01930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30089.1"
                     /translation="GGRERSEAHARASGRLASAMDPKFLSTLTLTVVPGTPLARLEDQ
                     ARFELPDVVGLLTELRWFLEEAHLSAAIFRSNHASNYLPIGGRLPRDREAILATLDEA
                     LAGRLPLRPEWARGL"
BASE COUNT          594 a         1279 c         1227 g          571 t
ORIGIN      
        1 gccccttcgg ggcgggcttt ctcatggcgg ctccttcggc gtctcccgac gcggacctgc
       61 cagtctatca ggcggcggcc gcccgcgtgg cgcgcaggaa gtagtggatg cccgaggcca
      121 gcaccagcgc ggccaccacc cagtacattt ccgggaggaa cgggtccatc cagggccggg
      181 gccccagggc gttgaagagc aggcccagcg acaccgcgat gagctgcatg gcggtgctga
      241 gctttcccag caggctgggg tggaacacgc tgtcgctcag gcgatccacg gaggcgaagg
      301 cgtagaagga gatcaccagg tccctcgaga tggccaggat ggccacccag accgggatgg
      361 gggcggtcat gccctgggtg cgccaggcga ggaggatgaa ggccgtggtc atcagcatct
      421 tgtcggcggc ggggtcgagg acggccccca ggtcggagcg ctggtcgaag gcgcgggcga
      481 tgaggccgtc gagaaggtcc gtgaaaccag cagctgcgaa caggatgaag gcctgccaat
      541 ggtgcccgta ccagaccgcg atggcgaaaa aggggatcgc gaggatccgc agcagggtca
      601 atgcgttggg caaggtcagg gggctggagg tgctcatttc ctccagttta gacgcagatc
      661 acatccattc atcgggacct tgttgcaccc tggggctggg atacacttgt cgttggagtt
      721 gagactatga ctcagaatct gtcggtgcca ttaagccttc ttcaacctgg agatcagggc
      781 gaggtggtgc tggtccaggc ccagggtcag gtccgccagc ggctcctgga gatgggcttc
      841 atccggggtg cccggctgcg ggtggagaag ctcgcgcccc tgggtgatcc gatggagctg
      901 gtgatcaagg gctaccacct ctccctgcgg cgggaagaga gcgcctgcat tctcgtgaac
      961 cgggtggcct gatgaccctg accatcgccc tcgcgggcaa tccgaactgc ggaaagacca
     1021 cgctcttcaa cgccctcacc ggcgcacgcc accacgtcgg caactggccg ggcgtgacgg
     1081 tggaacgccg cagcggcacc ttcgagcacg atggcaccgc catggaagtg gtggacctcc
     1141 ccggcaccta ctcgctgtcc gcccgtagcg aggacgagcg cgtggcctcg cagttcctgg
     1201 cctcccccga ggtggacctg gtcctgaacg tcctggacgc ctccaacctg gagcgcaacc
     1261 tctacctgag cacccagctg ctggagctgg gcaagcccgt ggccttcgtc ctcaacatgg
     1321 tggacgacgc cgagaaccgt ggcgtgcgca tcgacgtgcc cgccctcgag ctgctgctgg
     1381 gcgggcccgt gatccccacg gtggggaacc gcgagcaggg catcacagaa ctcaaggcgc
     1441 tgctctgcac cctggcccgc ggcgaatcca cccgctgccg gcggatcacg gtggactacg
     1501 gccatgacat cgaaggcgag ctggcgaagc tccaggcgga gatctgccgg gacgagaagc
     1561 tggaagccgc catgcccccc cggtggctgg ccctccagtt gctggagaac aacgccgacg
     1621 ccaagcgcgc ggtggacgaa agccacgccc gggaagccat tcgacagcag ctgtcgaaga
     1681 gctttgcctt tctggagccc cacctgggcg ccgacggcgc caccctcgtg gccgaacggc
     1741 gctacggctt cgcccacggc ctggtgaagg aagtggccac cgcccccgac gagaagaaga
     1801 cgccaaccgc acggttggac gcgatcctca cccatcgcgc gctcggcatc cccatcttcc
     1861 tgggcattct ggccctcgta tactccgtgt ccttcatcct gggcaagatc ccccaggact
     1921 ggatcgccga ggccttcaag gcgctgtcgg gcttcgccga ggcgcgcctg cccgcgggcg
     1981 aactcaccag cctgctcgtg gatggcgtca tccccggcgt gagcgcggtc atcgtcttcg
     2041 tgcccgtgat catgatcctc atgggctgca tcgccttcct ggaggacacc ggctacatgg
     2101 cccgggcggc cttcatcatg gaccggctca tgcacgtgat gggcctgcac ggaaagagct
     2161 tcatccccct catcatgggc agcggctgca acgtgcccgc catccaggcg gcgcgcacca
     2221 tcgagagccg ccaggaccgc ctcatcacca tgctcgtcac gcccctggtg agctgctccg
     2281 cgcggctgca ggtctacatc gtcatcgcgg gcaccttctt cacccccttc aaggccgcgc
     2341 tggccatcat cgccatgcac ttcctgggcc tcgccttggc ggtactcatg ggccgcatgc
     2401 tccgcagcgc gctcttcagc gggcccagct cgcccttcgt catggagctg ccgccctacc
     2461 gcctgccggt gctgaaggcc acgctcatcc acatgtggga gaaagggtcg gtcttcctca
     2521 cccgcgccgg caccaccatc ttcgcgggcg ccaccctggt gtggttcctg tcgcgctatc
     2581 ccggcatcgc caaccgcgaa tggaccctgg agtatcagca gcagcgccag gccgtggtcg
     2641 cgctgcacct gccccaggcc gaggccgagg aacgcctgcg ggacctccag ctggcccacg
     2701 agagccgcat cgtgaacacc tcgctggccg cccggctggg ccagaaggtg gagccggtgc
     2761 tccgcccgat cctggatccg gaccgcaagc gtcccgaggc ctggaaggat gtcatcgcgc
     2821 tcaccgccgg cttcgtcgcc aaggagatcg tggtctcgac catggcggtc atccaccagg
     2881 ccagcgagga gccgaaggaa ggcgagcggc tcagcccgct ccaggtagcg ctccgcgacg
     2941 gttcggggct gacgccgctc acggccctgg ccttcatggt cttcaccctg atctacaccc
     3001 cctgcatcgg caccatcgcc atgatccgcc gcgaggcggg cagctggggc tgggccggct
     3061 tcacggtcgg ctatggcctg gtgctgggct ggggcctggc ctggctcacc gtgaccgtgg
     3121 gccgcgccct cggattcgcc tgaggttccc gccatgacct tccagaccct gctcgtcacc
     3181 tccgccgccg gcctcgcggc cgcgtacttc ctgcgaggcg tggtccagga cttccgtcaa
     3241 ccccaggcgg gaagctgcgg aaagtgcagc tccggcggct gcccggtggc ccgcaaaggc
     3301 tgagcctgcg ccagccctac aggccccggg cccactcggg ccgaagggga aggcggcccg
     3361 ccagggcctc gtcgagggtg gcgaggatgg cctccctatc ccggggcagg cggccgccga
     3421 tgggcaggta attcgacgcg tggttcgagc ggaagatggc ggcgctgaga tgcgcctcct
     3481 ccaggaacca ccgcagctcg gtcagcaggc ccaccacgtc cggcagctcg aaccgcgcct
     3541 gatcctccag ccgcgcgagg ggcgtgcccg gaaccaccgt cagcgtgagg gtggagagga
     3601 atttcggatc catcgccgag gcgagccggc ccgaggctcg agcgtgggcc tcgctgcgct
     3661 cgcgaccccc c
//
LOCUS       DATGWW010000129         1777 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_56142, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000129 DATGWW010000000
VERSION     DATGWW010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1777
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56142"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..677
                     /locus_tag="VK150_01935"
     CDS             <1..677
                     /locus_tag="VK150_01935"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HLP30090.1"
                     /translation="GKAIRFYQAGSSEMFGSAKPRQHEGTRFEPRSPYACAKAYAHYQ
                     VINHRESYGLFACNGILFNHESPRRGETFVTRKITRAATRIKLGLQDKLFLGNLDAKR
                     DWGFAGDYVEAMWRMLQQDKPDDYVVATGESISIRDFLGLTFGRLDLDWQKHVEIDPR
                     YFRPAEVDHLEGDPSKGRRILGWEPKTDIRALAAMMVDSDLKLAQKELVLREAGHAEA
                     PRAGYR"
     gene            717..1511
                     /locus_tag="VK150_01940"
     CDS             717..1511
                     /locus_tag="VK150_01940"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HLP30091.1"
                     /translation="MISYGFNFEDVYIQRLFKGKTSGFYIDVGAAHPTEGSVTRHFYD
                     LGWRGINIEPQDAYFSQLVRERPRDINLQIAVGATEEVRPFFSLDGKGGSTLDPGNAE
                     RGSAMGFEVSVSSCTITTLAKVCEAHAPRDIDFLKIDVEGWERDVILGADWERFRPCL
                     LVIEATRPFSPEPSHEDWESELLAHRYMFAFFDGLNRYYLRVEDAHLAPVLNLPANVF
                     DDFKPYRQHLAEQELQRHLNPWYKNTSIYQSLRAFERNLRHARKTP"
     gene            1567..>1777
                     /locus_tag="VK150_01945"
     CDS             1567..>1777
                     /locus_tag="VK150_01945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30092.1"
                     /translation="MRRLFYLLSLPLLAQGPRFSARDAIRAEWARQPLAWTEARKAGL
                     PPADRARLERTLQRIGGPGAPALLTP"
BASE COUNT          325 a          652 c          508 g          292 t
ORIGIN      
        1 gcggcaaggc catccggttc taccaggccg gcagctccga gatgttcggc agcgccaagc
       61 cccgccagca tgagggcacc cgcttcgagc cccgcagccc ctacgcctgc gccaaggcct
      121 acgcccacta ccaggtgatc aaccaccgcg agagttacgg cctgttcgcc tgcaacggca
      181 tcctctttaa ccacgagtcc ccgcgccgcg gcgagacctt cgtgacccgc aagatcaccc
      241 gggccgccac gcgcatcaag ctgggactgc aagacaagct gttcctcggc aacctcgacg
      301 ccaagcgcga ctggggcttc gcgggcgact acgtagaagc catgtggcgc atgctgcagc
      361 aggacaagcc cgatgactac gtggtggcca cgggcgagag catcagcatc cgcgatttcc
      421 tgggcctcac cttcggacgg ctcgacctgg actggcagaa gcacgtggag atcgatcccc
      481 gctatttccg ccccgccgag gtggaccacc tcgaaggcga tccctccaag ggccgccgca
      541 tcctcggctg ggagcccaag accgacatcc gcgccctggc cgccatgatg gtggactccg
      601 acctcaagct ggcccagaag gagctggtac tacgcgaggc tggtcacgcc gaggcgcctc
      661 gtgccgggta ccgctaacgc gggcccctcg gctcctcccg gctcatcgag gaacccatga
      721 tcagctatgg attcaacttc gaagacgtct atattcagcg tctgttcaaa ggcaagacca
      781 gcggcttcta catcgacgtg ggagcagccc accccaccga gggatcggtc acgcgacact
      841 tctacgacct gggctggcgc ggcatcaaca tcgaacccca ggacgcctat ttcagccaac
      901 tggtgcggga gcggccccga gacatcaacc tccagatcgc cgtgggcgcc accgaagagg
      961 tgcgcccctt cttcagcctg gatggaaagg ggggatccac gctggatccc gggaacgccg
     1021 agcgtggatc cgccatggga ttcgaggttt ctgtctcctc ctgcaccatc accacccttg
     1081 cgaaggtctg cgaggcccac gccccccgag atattgactt cctgaaaatc gatgttgaag
     1141 gctgggagcg cgacgtcatc ctcggggctg actgggagcg tttccgtccg tgcctgctgg
     1201 tcatcgaagc cacccggccc ttctctccgg aaccctccca cgaggactgg gagtcggaac
     1261 ttctcgccca tcgctacatg ttcgcttttt tcgatggcct gaatcgctac tacctccgcg
     1321 tcgaggatgc tcatctcgcg ccagtgctga acctgccggc caacgtcttt gatgacttca
     1381 agccctatcg ccagcatctg gccgagcagg aactgcagcg acacctcaat ccctggtaca
     1441 agaacacgtc catctaccag tcactccgcg cgttcgaacg caacctcagg cacgcccgca
     1501 agaccccttg aggacgaact cccaccggga tcggagcctt cggccccgat cccatcgagg
     1561 cccaccatgc gccgtctgtt ctatctgctg agcctgcccc tgctcgccca ggggccccgc
     1621 ttctctgccc gagacgccat ccgggccgag tgggctcggc agcccctggc ctggaccgag
     1681 gcccgcaaag ccggcctgcc cccggccgac cgcgcccgac tggaacggac cctccagcgg
     1741 atcggcggcc ctggggctcc cgccctgctg acccccg
//
LOCUS       DATGWW010000130         2825 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_100216, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000130 DATGWW010000000
VERSION     DATGWW010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2825
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100216"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            48..>2825
                     /locus_tag="VK150_01950"
     CDS             48..>2825
                     /locus_tag="VK150_01950"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP30093.1"
                     /translation="MGKLTDDMRPRLMMALVETGQRAEAQREAREILKRNPAQAEALM
                     LLADTARTPEEVAAVRQEFERLPNRETAGYHAAMVPLLLRSNRVAEAEAAGGRALALD
                     PKLVTAHLSSAALRQANQDLPGMESALRTASELAPARSPERLRLAEVKKRQGALEEAR
                     TLVTAVLKEAPDYIPALMLSAELSKDAQDYKEAGAMLEKIFAIDSANPGARLLQADLL
                     LAKNDAPAAVDVLQRLDRMFSESPNVRLRLARAHLQAGQPNEAEDLLNGLLVKQPDFI
                     EASLLLAAVHLRQGNPAAVVPAMQAVLEKSPDLEPAALNLVLALEAQRRFEEAATAMR
                     RLTEQKPGNAAYGLQLGQLLVKAGQGEEARKVYEKMLESAPDDPATVSRLVDVDVLEG
                     KMDDAVRRASALREGHPTSAFAVFTEARVRVLKEEWEAAESSLKRVLELDPNHAEALD
                     FLARLYVKTSRLPEAGSAMEQRLQQAPNDLASLRLLAVIRTEQKEYAKAAEAYERIME
                     VLPQPSPEVMNNLAVLYADHLGKPDRALELAKKAQKLRPSVVGATTEEGKLEAASIAD
                     TLGWVLYRKGRFPEAFALAQEAVIHLGSHPEVQAHFGLIAAAMGRSEEATTALSKAVG
                     AEADFPSKAEARQRLALLTGGTATPETSADLAALVQTSPSDPLLYTRLAAALEKEHKY
                     GEAAAAYGTALKLNPELATAALRLAELHAGPLKDPMKAIGFAKTARELAPNDAPTAAV
                     LGGLAYRNGEYQWSYDLLTEAARGGRQDSRTLMDLGRAAYSLGRVAEARAAVQQALQA
                     TPEAEAAAEAKVFLDLTATPAPAEAVAQEVLTKDVRSVPALMVVGEARLKAGDPAAAV
                     AAWQKVLGIYPGFAPARKNLALALLNDSAARAQAYDLALKAREALPDDPDLTEALAIL
                     THHRRDHQYAVD"
BASE COUNT          515 a          896 c          987 g          427 t
ORIGIN      
        1 agggctcccc gatgcaggca tttccgtatc tgcggagagc cagcgagatg ggcaagctga
       61 ccgatgacat gaggccacgt ctgatgatgg ccttggtgga aaccggccag agggccgagg
      121 cccagcgcga ggcacgggag atcttgaagc gaaacccggc gcaggcggag gccttgatgc
      181 tgctggccga cacggcacgc acgccggagg aggtggccgc cgtgcggcag gaattcgagc
      241 gtctgcccaa ccgtgagacg gcaggatatc atgcggccat ggttcctttg cttctgcgct
      301 ccaaccgggt ggcggaagcc gaggccgccg ggggcagggc gttggccctc gaccccaagc
      361 tggtgacagc ccatctgtcc agtgcggccc tgcgtcaggc gaatcaggat ctgccgggca
      421 tggagagcgc gctgcgcacg gcctccgagc tggctccggc ccgttctccc gagcggctgc
      481 gactggccga agtgaaaaag aggcagggcg cgctggagga ggcgcgcacg ctcgtcaccg
      541 ccgtcctcaa ggaagctccg gattacatcc ccgctttgat gctgtccgcg gaactgtcca
      601 aggacgccca ggactacaag gaagccgggg ccatgctcga gaagatcttc gccattgatt
      661 ccgccaatcc cggagcgcgt ctgctgcagg cggacttgct gctcgccaaa aacgatgcgc
      721 cggcggcggt cgatgtgctc cagcgcctgg accggatgtt cagcgagtct ccgaacgtcc
      781 gattgaggtt ggcccgcgcg catctccagg ccggacagcc caacgaggcg gaggatctgc
      841 tgaacgggct gctggtcaag cagccggatt tcatcgaggc ctccctgctc ctggcggcgg
      901 tgcatctgcg ccagggcaac ccggccgccg tcgtgccagc gatgcaggcg gtgctggaga
      961 agagcccgga cttggaaccc gccgcgctca atttggtgct cgctctcgaa gcgcaacggc
     1021 gttttgaaga ggccgctacg gccatgcgcc gcctgacgga acagaagccc gggaatgcgg
     1081 cctacgggtt gcagctcggg cagttgctgg tcaaggcggg ccagggcgag gaggcccgga
     1141 aggtgtacga aaagatgctc gagagcgccc cggacgatcc ggcgacggtg agccggttgg
     1201 tggatgtgga cgtgctggag ggtaagatgg atgacgccgt gcgacgggcc agcgctctgc
     1261 gtgaaggtca tccgacgtcg gcgttcgcgg tctttaccga agcccgggtc cgtgtgttga
     1321 aggaagagtg ggaagccgcg gagtcttccc tgaagagggt gcttgaattg gaccccaacc
     1381 atgccgaagc cctggatttc ctggcccggc tgtatgtgaa aaccagccgt cttccggaag
     1441 cagggagcgc gatggaacaa cgcctgcaac aagcacccaa cgatctggcg tcccttcgcc
     1501 tgctcgcggt gatccgtacc gaacagaagg aatacgccaa ggcggccgag gcctatgaac
     1561 ggatcatgga agtgctcccg cagccgagcc cggaggtcat gaacaatctg gctgtgctgt
     1621 acgccgatca cctcggcaag ccggatcggg cgttggagct tgccaaaaag gcccagaagc
     1681 tgcggccatc ggtggtgggg gccaccaccg aagagggcaa actggaagcc gcctccatcg
     1741 cggacaccct gggctgggtt ttgtacagga aggggaggtt tccggaagcc tttgcgctgg
     1801 cccaggaggc ggtgatccat cttggctccc acccggaagt gcaggcgcac ttcgggttga
     1861 tcgcggccgc catggggcgg agcgaggagg ccacaaccgc gctcagtaaa gctgtcgggg
     1921 cggaagcgga ctttccctcc aaggcggagg cgcgtcagcg cctggcgctg ctcactggcg
     1981 gcacggcgac cccggagacc agcgccgatc tggcggccct ggtccagacg tccccatcgg
     2041 atccgctcct gtacacgcgg ctcgcggcgg cgctcgaaaa agagcacaag tatggcgagg
     2101 ccgccgccgc gtatggcacc gctctcaaac tgaaccctga gctggccacg gccgccctca
     2161 ggctggccga actgcatgca gggccgttga aggacccgat gaaggcgatc gggttcgcca
     2221 aaacagcgcg ggaactcgcc cccaatgatg ccccgacggc ggccgtgctc ggtggtctgg
     2281 cctaccgcaa cggcgagtat caatggtcgt atgaccttct cacggaagcc gcccggggcg
     2341 ggaggcagga cagtcggacc ctgatggacc tcggcagggc tgcgtacagc ctgggtcggg
     2401 tcgcggaggc gcgcgccgcg gtccagcaag ccctgcaggc gacgccggaa gcggaggcag
     2461 cggccgaggc caaggtcttc ctggatctca ccgcgacgcc cgcgccggcg gaggccgtgg
     2521 ctcaggaggt cctgaccaag gatgtgcgca gcgtgccggc cctcatggtc gtcggcgaag
     2581 cccggctgaa ggcaggagac ccggccgcag cagtggccgc ctggcagaag gtgctcggca
     2641 tctaccccgg gtttgctccg gcccgcaaaa atctggccct cgcgctgctc aatgattctg
     2701 cggcccgcgc ccaggcctat gaccttgccc ttaaggcgcg tgaggcgctg ccggacgatc
     2761 ccgacctgac cgaagcactg gccatcctca cccaccaccg ccgggatcat cagtacgccg
     2821 tcgat
//
LOCUS       DATGWW010000131         1861 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_236731, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000131 DATGWW010000000
VERSION     DATGWW010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236731"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..803
                     /locus_tag="VK150_01955"
     CDS             <1..803
                     /locus_tag="VK150_01955"
                     /inference="COORDINATES: protein motif:HMM:NF012255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ADP-ribosylation factor-like protein"
                     /protein_id="HLP30094.1"
                     /translation="GKTTNLQYIYDKTNPNSKGKLISLATETDRTLFFDFLPIELGTI
                     RGMKTRIQLYTVPGQVFYDATRKLVLRGADAVVFVADSQAPALESNKESFQNLIVNLK
                     DQGAELEKIPHVIQWNKRDTPNALPVETLNREINLFNAPTFEACAMRGEGVKETLTGV
                     AKLVLKSLAEKYGGGIVEEPAVLLGGAPPPPPRPAESTKPLEVEELSAGELLEEIEEI
                     PVESGPTTHAPAATHMPHSSVVEVPVVLDRSLFNGENPVEIKLKLYIR"
     gene            893..>1861
                     /gene="gltX"
                     /locus_tag="VK150_01960"
     CDS             893..>1861
                     /gene="gltX"
                     /locus_tag="VK150_01960"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: protein motif:HMM:NF012951.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HLP30095.1"
                     /translation="MSRQVVTRFAPSPTGMLHIGGVRTALFCWLFARKHGGRFILRIE
                     DTDLSRSTDDNIRIIEEGMAWCGLDWDEGPVVGDPGQWKGPHGPYRQMQRMDLYRAKI
                     QELLDKGLAYRCRCSREAIEERRKTVEAAGKVFQYNRGMDRGKGCAGAHHDASEPAAI
                     RFRMPEEGDIVVPDLIKGHTHFPADSLDDWIIARTGDGPGVIGVPTYNFCVVVDDTHM
                     QVTHVIRGDDHLNNTPKQIPLFAAFGYDLPAFAHVPMILGADGAKLSKRHGATSITEY
                     QAMGLLPSAVRLALARLSWTPKIDGKAVESAEEELLTDEQMIQLFDL"
BASE COUNT          337 a          680 c          581 g          263 t
ORIGIN      
        1 gcgggaagac cacgaacctg cagtacatct acgacaagac gaacccgaac tcgaagggca
       61 agctcatctc cctggccacc gagaccgacc gcaccctgtt cttcgacttc ctgcccatcg
      121 agctgggcac catccggggc atgaagaccc gcattcagct gtacaccgtg cccggccagg
      181 tcttctatga cgccacccgc aagctggtgc tgcgcggggc cgacgccgtg gtcttcgtgg
      241 cggactccca ggccccggcc ctggagagca acaaggagag cttccagaac ctcatcgtga
      301 acctgaagga ccagggcgcc gagctggaga agatccccca cgtgatccag tggaacaagc
      361 gggacacgcc caacgccctg cccgtggaga cgctcaaccg cgaaatcaac ctcttcaacg
      421 cgcccacctt cgaagcctgc gccatgcgcg gcgagggcgt gaaggagaca ctgaccggcg
      481 tggccaagct ggtgctgaag agcctggccg agaagtacgg cggcggcatc gtggaagagc
      541 ccgccgtgct gctgggcggc gccccgcccc cgcctccgag gccggctgaa tccaccaagc
      601 ccctcgaggt ggaggagctc tctgccggtg agctgctgga ggagatcgag gagatccccg
      661 ttgagtccgg tcccacgacc cacgccccgg cggccaccca catgccccac agcagcgtgg
      721 tcgaggttcc cgtggtgctg gaccgcagcc tcttcaacgg ggagaacccg gtcgagatca
      781 agctgaagct gtatattagg taggctgtca gctctccgct gtctgtcggg cgccccgcgg
      841 cgcccctctt tttgagcgcc gacagctgga aagccgaacg ccggagtccc ccatgtcccg
      901 ccaggtcgtc acccgtttcg ccccctctcc caccggcatg ctccacatcg gcggcgtccg
      961 cacggcgctc ttctgctggc tcttcgcccg caagcacggg ggccgcttca tcctgcgcat
     1021 cgaggacacg gacctctccc ggagcaccga cgacaacatc cgcatcatcg aggagggcat
     1081 ggcctggtgc gggctggact gggacgaggg tcccgtggtg ggcgatcccg gccagtggaa
     1141 gggcccccac ggcccctacc gccagatgca gcgcatggac ctgtaccggg cgaagatcca
     1201 ggagctgctg gacaagggcc tggcctaccg ctgccgctgc tcccgggagg ccatcgagga
     1261 acgccgcaag acggtcgagg ccgcgggcaa ggtgttccag tacaaccgcg ggatggatcg
     1321 cggcaagggc tgcgccggcg cgcaccacga cgccagcgag cccgccgcca tccgcttccg
     1381 catgcccgag gagggcgaca tcgtggtgcc cgacctcatc aaggggcaca cccacttccc
     1441 cgcggacagc ctcgacgact ggatcatcgc ccgcaccggc gacggccccg gcgtgatcgg
     1501 cgtgcccacc tacaacttct gcgtggtggt ggacgacacc cacatgcagg tcacccacgt
     1561 gatccgcggc gacgaccacc tgaacaacac gcccaagcag atccccctct tcgcggcctt
     1621 cggttacgac cttccggcct tcgcccatgt gcccatgatc ctgggcgccg acggcgccaa
     1681 gctcagcaag cgccacggcg ccaccagcat caccgagtac caggccatgg gcctgctgcc
     1741 ctccgccgtg cgcctcgccc tggcccggct ctcctggacg cccaagatcg acggcaaggc
     1801 tgtggagagc gccgaggagg agctgctcac ggacgagcag atgatccagc tgttcgacct
     1861 g
//
LOCUS       DATGWW010000132         1607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_9887, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000132 DATGWW010000000
VERSION     DATGWW010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9887"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..394)
                     /locus_tag="VK150_01965"
     CDS             complement(<1..394)
                     /locus_tag="VK150_01965"
                     /inference="COORDINATES: protein motif:HMM:NF013155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30096.1"
                     /translation="MTSLAPPLIDRHTHLEGSLDPAWVRREAGRRGLALPVSLEALWS
                     GGAVPFQGFIEAFLFGAALLDGRAAVREAVLAAARRTQKAGGIGFDLWASPHFLVVHR
                     GQVTLDEFWLGLEEGLAEAAALGVSGCVV"
     gene            complement(453..746)
                     /locus_tag="VK150_01970"
     CDS             complement(453..746)
                     /locus_tag="VK150_01970"
                     /inference="COORDINATES: protein motif:HMM:NF021083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FYDLN acid domain-containing protein"
                     /protein_id="HLP30097.1"
                     /translation="MADLGKKFTCFQCAAKFYDFGKPEAICPKCGANQKTAPAKTKAV
                     KKEKSVHVIEDDFTPEPEAESLEETFSESGVPIERGRGEGFDPGDLRMDDYDE"
     gene            complement(826..>1607)
                     /locus_tag="VK150_01975"
     CDS             complement(826..>1607)
                     /locus_tag="VK150_01975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30098.1"
                     /translation="ASQSDLLKRLLEAMSSLAERSALFILKQGLASPYAHRGFEAEAP
                     RKAGAVVPPAELDALIHGTGWNIRRKGPAYSALIGAISGFEATDMAIFPLRHKKKAVA
                     LVLIDSGLRQQLDHPERARALVLIASALLAALAAGKEEEARPHLAPEPQPSAPTQMVP
                     DPIEPAPAAELDAKTRAGAERLARVLVGDVELYFPDKVARVRTHGNLYGLLRDELERS
                     RATFVERFGEDVEIRHRIFTTTVIQQLCDGDAAKLGSAPWA"
BASE COUNT          236 a          551 c          563 g          257 t
ORIGIN      
        1 ccaccacgca gccggagacg ccgagggcgg cggcttccgc gagcccctcc tcgagcccga
       61 gccagaactc atcgagggtg acctgcccgc ggtggaccac caggaagtgc ggcgaagccc
      121 agaggtcgaa gccgataccg ccagccttct gcgtccggcg ggccgcggcc agcacggctt
      181 cccgcacggc cgcgcggcca tcgagcaggg ccgcgccgaa gaggaaggcc tcgatgaagc
      241 cctggaaggg cacggccccg ccggaccaca gggcctcaag gctcaccggg agggcgaggc
      301 cgcggcggcc cgcctcgcgg cgcacccagg cgggatccag cgacccctcc aggtgggtgt
      361 gccgatcgat gaggggaggg gcgagggacg tcacggagtc attatgcgcg ccaggggccg
      421 ccactccgtc ctcctcgctg tcgcgggctc gcctactcgt cgtagtcgtc catgcgcagg
      481 tcgccggggt cgaagccctc gccgcggccc cgctcaatgg gcacgccgct ctcgctgaag
      541 gtctcctcca ggctctcggc ctcgggctcc ggcgtgaagt cgtcctcgat cacgtggacg
      601 ctcttctcct tcttcacggc cttggtcttg gccggcgcgg tcttctggtt ggccccgcac
      661 ttgggacaga tggcctccgg cttgccgaag tcgtagaact tcgccgcgca ctggaagcaa
      721 gtgaattttt taccgagatc cgccattgcc ttttccccgt ccgtacccaa aggaacaagg
      781 ttctaccaga aacaaggccc catgtcatcc ttcgaggccc tcgaatcagg cccagggggc
      841 agatcccagc ttggcggcat cgccatcgca tagttgttgg atgacggtgg tggtaaaaat
      901 acggtgtcta atttcgacgt cttcgccgaa tctctccaca aaggtggcac ggctgcgttc
      961 gagctcgtcc ctcagcaggc cgtagaggtt gccgtgggtg cggacccggg ccaccttgtc
     1021 cgggaagtag agctccacgt cgcccaccag cacccgggcc aaacgttcgg cgccggcccg
     1081 cgtcttcgcg tcgagctcgg cggcaggggc cggctcgatg gggtcgggca ccatctgggt
     1141 gggtgcgctg ggctggggtt ccggcgccag gtgggggcgg gcctcctcct ccttcccggc
     1201 ggccagggcc gcgagcagcg cggaggcgat gagcaccagg gcccgggccc gctcgggatg
     1261 atccagctgc tggcggagcc cgctgtcgat caggaccagc gccacggctt tcttcttgtg
     1321 gcgcaggggg aagatcgcca tgtccgtggc ctcgaagccg ctgatggcac cgatgagcgc
     1381 cgagtaggcg ggtcccttgc ggcggatgtt ccagcctgtc ccgtggatca gcgcatcgag
     1441 ctcggccggg ggcaccacgg ctccggcctt gcgcggggcc tccgcctcga agccccggtg
     1501 ggcgtacggg gaggccaggc cctgcttgag gatgaagagg gcgctgcgct cggccaggct
     1561 ggacatggcc tccagcagcc gcttgagcag gtcgctctgg ctcgcgg
//
LOCUS       DATGWW010000133         1558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_100604, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000133 DATGWW010000000
VERSION     DATGWW010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100604"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1558)
                     /locus_tag="VK150_01980"
     CDS             complement(<1..>1558)
                     /locus_tag="VK150_01980"
                     /inference="COORDINATES: protein motif:HMM:NF036694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HLP30099.1"
                     /translation="TVEVALQWSDAYQESIYCYTNNIPQRDGGTHLAGFRAALTRAIN
                     NYIEAEGLAKKAKIQTTGDDAREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKPAVESA
                     TGEKLDEFLLENPSDAKIIAGKVVEAARAREAARKARELTRRKGALDIAGLPGKLADC
                     QERDPAHSELFLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMLSSAEVG
                     TLITALGCGIGREEFNPDKLRYHRIIIMTDADVDGSHIRTLLLTFFYSQMPELIERGH
                     IYIAQPPLYKVKRGKQERYVKDDAELNASLLQQALESADLVVEAGAPPLSGVALEQLA
                     RKFQSVMASIHRLSRRFNGAVMEKMIAMPRFDMEQFLSAEKSEPWFHELVARLNGDTN
                     GERRYQVSFGRAAGGGIETATLAEVRHGVASEFVYPVEFFSSPEFAAITALRDQLDGL
                     LQPGAYVQRGDRRQEVGSFRQALEWLLDEARRGQHIQRYKGLGEMNPEQLWETTMDPA
                     VRRLLKVQIED"
BASE COUNT          226 a          492 c          542 g          298 t
ORIGIN      
        1 gtcttcgatc tgcaccttca gcaggcgccg cacggccggg tccatcgtgg tctcccacaa
       61 ctgctccgga ttcatttcgc cgagaccctt gtagcgctgg atgtgctggc cgcggcgggc
      121 ctcgtccagc agccattcga gggcctggcg gaagcttccc acttcctggc gacggtcgcc
      181 tcgctgcacg taggcgccgg gctggagcag gccgtcgagc tggtcacgca gggcggtgat
      241 ggcggcgaat tccggcgagg agaagaactc caccgggtag acgaactcgc tggcgacgcc
      301 gtggcgcacc tcggcaaggg tggcggtttc gatgccgccg cccgccgcgc ggccaaagct
      361 cacctgatag cggcgctcgc cgttggtgtc gccgttgagg cgggccacca gttcatggaa
      421 ccagggctcc gacttctcgg cgctcaggaa ctgctccatg tcgaagcgcg gcatggcgat
      481 catcttctcc atcaccgcgc cgttgaagcg gcggctcagg cggtggatgg aggccatcac
      541 cgactggaac ttgcgggcca gctgttccag ggcgacgccc gagaggggcg gcgcgcccgc
      601 ctcgaccacc agatcggcgc tctccagggc ctgctgcagc aggctggcgt tgagctcggc
      661 gtcatccttc acataccgct cctgcttgcc gcgcttcacc ttgtagaggg gcggctgggc
      721 gatgtagatg tggccgcgct cgatgagctc gggcatctgg ctgtagaaga aggtgagcag
      781 cagggtgcgg atgtgggagc cgtccacgtc ggcgtcggtc atgatgatga tgcggtggta
      841 gcgcagcttg tcgggattga actcctcccg cccgatgccg cagcccaacg ctgtgatgag
      901 agtgcccact tcggcggaag aaagcatctt gtcgaagcgc gccttctcca cgttcaggat
      961 cttgcccttg aggggcagga tcgcctgggt acggcggtcg cgcccctgct tggctgaacc
     1021 gcctgcggag tcgccctcca ccaggaagag ttcggagtgg gcggggtcgc gctcctggca
     1081 gtcggccagc ttgccgggga ggccggcgat gtccagcgcc cccttgcggc gggtcagttc
     1141 acgggccttg cgggccgcct cgcgtgcgcg ggccgcctcc accaccttgc cggcgatgat
     1201 cttggcgtcg gaggggttct ccagcaggaa ttcatccagc ttttcacccg tagcggactc
     1261 gactgcgggc ttcacctccg acgaaaccag cttgtccttg gtctgggagg agaacttggg
     1321 gtccggcacc ttcacggaga ggacggcggt gagaccctcg cgggcgtcgt cgccggtggt
     1381 ctggatcttg gcctttttgg ctaagccttc cgcttcgatg tagttgttga tggcacgcgt
     1441 cagtgccgca cggaagccgg ccaggtgggt gccgccatcc cgctggggga tgttgttggt
     1501 gtagcagtaa atgctctcct ggtaggcatc gctccactgg agggctactt ccacggtc
//
LOCUS       DATGWW010000134         3067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_236914, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000134 DATGWW010000000
VERSION     DATGWW010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236914"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..551)
                     /locus_tag="VK150_01985"
     CDS             complement(<1..551)
                     /locus_tag="VK150_01985"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP30100.1"
                     /translation="MNGFSQALREDFGQDLPVQAAAYLHQIQVGSERMGALIDGLLHL
                     SRSTQGAMERRGINLSKLAEEVRKELEESEPGRRVTWHIQPGLAARGDARMLLVVLRN
                     LLGNAWKYTARQPVPEIRLDAVQHDGLRCFRVADNGAGFDMAHAAKLFQPFQRLHRQD
                     EFPGIGVGLATVQRIVRRHGGEIS"
     gene            complement(606..2687)
                     /locus_tag="VK150_01990"
     CDS             complement(606..2687)
                     /locus_tag="VK150_01990"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLP30101.1"
                     /translation="MTGPLPGGSSGGAVGREAGNGRWPEGGTGWAWWLFRYGLALLLP
                     AVTLALRLHLGEAFEDRPLMVGFLLPVLICAFIGGQGPGLLATLVTALEVNLFLLSPR
                     LTLALSSADAVHWFVLILNGVLVSVLAGAWHRARRGDAASLGVLPRHGFRRFGPLPLE
                     LNRTERLMVALAMPFLACALQWVLWEHLRPFIWFLFYPAVFMSAWVAGLAGALPSALI
                     AALLAVICFHPPAMSLDKGGIGYLPSVLVFLAMAALYGRIHDRLAEAEQQVLDHLESE
                     RQLKEIALKSQAELLARMSRVAKVGGWEFDVLSGEGAWTEEVARIYDLDPATRVSVGL
                     GMAYFLPASRAQLEQAVADAAGLARPFDLELEMETAKGLHKWVRSQGFPVVDQGRVVR
                     IIGALQDITDRKLVEDQLLSSERMFTAAFTQNPAAIALSRLEDGVFLDVNATWETLTG
                     RSREEAIGHSARTMGIWPTLEDAQRFVQELKGQGVVRGWEQSFLTKRGDTFVAELAAQ
                     LLSIRGETYIISTLVDITQRCHAEAELKASRAKLETALASMTDAVFISDREGRFIEFN
                     EAFATFHKFSSKAECSKTFAEYPAILDVFLPDGSPAPVDQWAVSRALRGETASNEEYA
                     LRRKDTGETWVGSFSFAPIRDEHGAIVGSVVAGRDITGQKRTQEEIEHLNASLELRVA
                     ERTAELTAANA"
     gene            complement(2877..>3067)
                     /gene="ruvX"
                     /locus_tag="VK150_01995"
     CDS             complement(2877..>3067)
                     /gene="ruvX"
                     /locus_tag="VK150_01995"
                     /inference="COORDINATES: protein motif:HMM:NF015607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HLP30102.1"
                     /translation="TGLPLRFVNEHLSSAEAERLLRERGVKPEKRKLLLDAAAAAVIL
                     GELLADRRSRGEGTGSPG"
BASE COUNT          507 a         1069 c         1022 g          469 t
ORIGIN      
        1 gagatctccc cgccatgccg ccggacgatg cgctggacgg tggccaggcc gacgccgatg
       61 ccgggaaact cgtcctggcg gtgcaggcgc tggaagggct ggaacagctt ggctgcatgg
      121 gccatgtcga accccgcgcc attgtcggcc acccggaaac agcggaggcc gtcgtgctgg
      181 actgcgtcca ggcggatctc gggcaccggc tgccgcgcgg tgtatttcca cgcattgccc
      241 agcaggttcc gcagcaccac cagcagcatg cgggcgtccc cccgggccgc cagtcccggc
      301 tggatgtgcc aggtcaccct gcgtccgggt tcgctctcct cgagttcctt ccggacctcc
      361 tcggccagct tcgagaggtt gatgccgcgc cgctccatgg cgccctgggt gcttctcgac
      421 agatgcagca ggccgtcgat gagggcgccc atccgctcgc tgcccacctg gatctggtgc
      481 agataagccg cggcctggac cggcaggtcc tggccgaagt cctcccggag cgcctggctg
      541 aatccgttca tggcgcggag gggagcccgg aggtcatggg aaacggcgta ggcgaacgca
      601 tccagttacg cattggccgc cgtgagctcg gcggtgcgct ccgcgaccct cagttccaga
      661 ctggcgttca ggtgctcgat ctcctcctgg gtgcgcttct gcccggtgat gtcgcgcccc
      721 gccaccaccg atcccacgat ggcgccgtgt tcatccctga tgggcgcgaa gctgaagctg
      781 cccacccagg tttcccccgt gtccttccgg cgcagggcgt attcctcgtt cgaggccgtc
      841 tcgccccgca gcgcgcggga cacggcccac tggtcaaccg gcgcgggcga accatccggc
      901 aggaacacgt cgagaatcgc cgggtactcg gcgaaggttt tcgagcactc cgccttgctg
      961 gagaacttgt ggaaggtcgc gaaggcctcg ttgaattcga tgaagcggcc ttcccggtcg
     1021 gagatgaaga ctgcgtcggt catgctggcc aaggcggttt caagcttggc gcggctcgcc
     1081 ttgagctcgg cttccgcatg gcaacgctgg gtgatgtcca ccagggtcga gatgatgtag
     1141 gtctcgcccc ggatggagag gagctgcgcc gccagttccg ccacgaaggt gtcgccccgc
     1201 ttcgtgagga agctctgctc ccagccgcgc accacccctt ggcccttcag ctcctggacg
     1261 aaccgctggg cgtcttccag cgtgggccag attcccatgg tccgcgcgga gtggccgatg
     1321 gcctcttccc ggctgcggcc ggtcagggtc tcccaagtgg cattcacatc caggaacacc
     1381 ccatcctcca gtcgcgacag ggcgatggcg gcggggttct gggtgaaggc ggcggtgaac
     1441 atccgctcgg aggagaggag ctgatcctcg accagcttcc ggtccgtgat gtcctgcagg
     1501 gcgccgatga tgcggaccac ccggccttga tccaccacgg gaaaaccctg ggaacgaacc
     1561 cacttgtgga ggcccttggc ggtctccatc tcgagttcca ggtcgaaggg tcgcgcaagg
     1621 cccgccgcgt ccgccactgc ctgctcaagc tgcgcgcggc tggcgggcag gaagtaggcc
     1681 atgcccaggc cgacactcac ccgggtcgcg gggtcgaggt cgtagatccg cgccacttcc
     1741 tccgtccagg ctccctcccc gctgagcacg tcgaattccc agccgcccac cttggccacc
     1801 cggctcatgc gggccaaaag ctccgcctgg gatttcagcg cgatctcctt cagctgccgc
     1861 tcgctctcca ggtggtccag cacctgctgc tcggcctccg ccaggcggtc gtggatccgg
     1921 ccgtagaggg ccgccatcgc caggaagacc agcaccgagg gaaggtagcc gatgccaccc
     1981 ttgtccaggg acatggcggg ggggtggaag cagatgacgg ccagcagggc tgcgatgagg
     2041 gcggagggaa gcgcgcccgc caggcccgcc acccaggcgc tcatgaacac cgccgggtag
     2101 aagaggaacc agatgaaggg gcggaggtgc tcccacagga cccactgcag ggcacaggcc
     2161 aggaacggca tggccagggc caccatcagc cgctccgtcc ggttgagttc caggggcagt
     2221 gggccgaagc ggcggaaccc gtggcgcgga aggactccca ggctcgcagc gtcgccccgg
     2281 cgggcccggt gccaggcccc ggcgaggacg ctcaccagca caccgttcag gatgagcacg
     2341 aaccagtgga ccgcatcggc tgaactgagc gcgagcgtca aacggggcga cagcaggaag
     2401 aggttcactt ccagcgccgt gacgagggtc gcgaggagtc ccggcccctg accgccgatg
     2461 aacgcgcaga tcaggaccgg caacaggaag cccaccatca gcggccggtc ctcgaaggcc
     2521 tcgcccaggt gcagccggag ggccagggtg accgcaggga ggagcagggc caagccgtac
     2581 cggaacagcc accaggccca gcccgtgccg ccctccggcc acctcccatt tcccgcttcc
     2641 cggcccacgg cgcccccgga ggagccgccc ggcagcggtc cggtcatggc gatccctccg
     2701 gcaggccgca gggatcctca cagcgatcaa ccagacggcg gcggctcagg gcctggacca
     2761 tggcatcctc gaggcgaatg gatgtggtcg tgcggaatga aatcagccga ggaatctact
     2821 gatctgatgg tccgtaatat cgtcctctgg tgacctgaag tcaaacttca gccccctcaa
     2881 cccggggacc ccgtcccctc gccccggctc cggcgatcgg ccagcagctc acccaggatc
     2941 acggccgccg cggcggcgtc caggaggagc ttgcgcttct cgggtttcac accccgctcc
     3001 cgcaacaggc gttccgcttc ggcactgctg aggtgctcat tcacgaaacg caaaggcagg
     3061 cctgtgc
//
LOCUS       DATGWW010000135         2076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_367699, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000135 DATGWW010000000
VERSION     DATGWW010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_367699"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            42..377
                     /locus_tag="VK150_02000"
     CDS             42..377
                     /locus_tag="VK150_02000"
                     /inference="COORDINATES: protein motif:HMM:NF015959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoVG family protein"
                     /protein_id="HLP30103.1"
                     /translation="MSDVIKLATGEGAAQAESPAFTLEITEITFRQVDGPYGPLRAYV
                     RVVLNDALAITGIRIVEGKAGLFVAFPRVLSKKDGRGHNVCYPITHEATQYFTREILR
                     EYGTTVGAA"
     gene            425..808
                     /locus_tag="VK150_02005"
     CDS             425..808
                     /locus_tag="VK150_02005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30104.1"
                     /translation="MGYRIMQIGEIIGPDDLVRTEVARKDVYRASHCQGLPIEEEDVG
                     NYFRRIEPVAESPQPASTETPADREIARLKRALAYLANKDHYDLYDVGYDLIRPGGAR
                     QVGIFMISRHLAAWTFAQEVLGEKV"
     gene            805..987
                     /locus_tag="VK150_02010"
     CDS             805..987
                     /locus_tag="VK150_02010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30105.1"
                     /translation="MKALILTALATAPGLILLAAWCLVNRIPAPAKERILPEHPIPKH
                     KALRDRLAAREGAQDA"
     gene            980..1111
                     /locus_tag="VK150_02015"
     CDS             980..1111
                     /locus_tag="VK150_02015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30106.1"
                     /translation="MPKSALIVLSILLGLRGALYLWTAYRWEKDRREALDRLRRHRV"
     gene            1104..1394
                     /locus_tag="VK150_02020"
     CDS             1104..1394
                     /locus_tag="VK150_02020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30107.1"
                     /translation="MSDYAVANGLACYDCGYTRCRCEDIEAEAWAEELARSRAALRTD
                     RLLLAIELMETKIARIEDETKYHPALPELRERLENLTLALLNHRRAHHKELF"
     gene            1394..>2076
                     /locus_tag="VK150_02025"
     CDS             1394..>2076
                     /locus_tag="VK150_02025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30108.1"
                     /translation="METTTAPAPVPATLNGNGHAVALAQPSANPLEMPVPVQAVIARH
                     EAIQEIVRGVFQDGTHYGEIPGTSKDKDGKPKKTLLKPGFDTLCEAFQFAPDFIKQPE
                     SVETDKFINLVYKCVLTSSTGRVVTTGIGSCNSKEEKYRWKPGVKRACPACGSTTALL
                     KSKDRPEWFCWAKKDGCGAKFPLNDERITSQKVEREENDNAWNHHNTLTKMAQKRAGM
                     AAIITACGIS"
BASE COUNT          407 a          725 c          628 g          316 t
ORIGIN      
        1 taacgcccgg agcccagatc acccaaacag gaggtaccct gatgagcgat gtaatcaaat
       61 tagcaacggg cgagggggct gcgcaagccg aatccccggc cttcaccctc gaaatcaccg
      121 agatcacctt ccgccaggtc gacgggccct acggcccgct ccgcgcctac gtgcgcgtgg
      181 tcttgaacga cgcgctcgcc atcaccggca tccgcatcgt cgaaggcaag gcgggcctct
      241 tcgtcgcctt ccctcgggtg ttgtccaaga aggacgggcg cgggcataac gtctgctatc
      301 ccatcaccca cgaggccacg cagtacttca cccgggagat cctgcgcgag tacggaacga
      361 cggtgggtgc agcatgacca cctgccaagg cttcgacgcc tccctggacg cctccggaac
      421 tcccgtgggc taccgcatca tgcagatcgg ggagatcatc ggaccggatg atctggtccg
      481 gacggaagtg gcgcgaaagg atgtgtaccg cgcctcgcac tgccagggcc tgccgatcga
      541 agaagaggac gtcgggaact atttccgccg catcgagccc gtcgccgaat ccccccagcc
      601 cgccagcacg gagacgcccg ccgatcgcga gatcgcccgg ctcaagcgcg cccttgccta
      661 tctggccaac aaggaccatt acgacctgta cgacgtgggc tatgacctga tccggccggg
      721 tggggcccgc caggtcggca tcttcatgat ctcgcgtcac ctcgccgcct ggacgttcgc
      781 ccaggaagtt ctcggggaaa aggtatgaag gcgctcatcc tgaccgccct ggccacagcc
      841 ccgggcctca tcctcctggc cgcctggtgc cttgtcaacc gcatcccagc cccagccaag
      901 gagcggatcc tccccgagca tcccatcccg aagcacaaag ccctacgaga ccgcctggcc
      961 gcccgcgagg gggcccagga tgcctaagtc tgccctcatc gtcctgtcca ttctcctggg
     1021 cctgcgcggc gccctgtatc tgtggacggc ctaccggtgg gagaaggacc gccgcgaggc
     1081 cctggatagg ctccggaggc accgtgtctg attacgccgt cgccaacgga ctggcctgct
     1141 acgactgcgg ctatacccgg tgccggtgcg aggacatcga ggccgaagcc tgggccgaag
     1201 agctggcgcg ctcgcgcgct gccttgcgca ccgaccgctt gctgctggcc atcgaactca
     1261 tggaaaccaa gatcgcgcgc atcgaagacg agaccaaata tcacccggcc ctgcccgagc
     1321 tgcgggagcg ccttgaaaac ctcaccctgg ccctgctgaa ccatcggcgg gcccaccata
     1381 aggagctttt ctgatggaaa ccactaccgc gccggcgccc gtgccggcca ccctcaacgg
     1441 caacggccat gccgtcgcct tggcccagcc gagcgccaac cctctcgaga tgcccgtgcc
     1501 ggtgcaggcg gtcatcgccc gccacgaggc gatccaggaa atcgtccgtg gagtcttcca
     1561 ggacgggact cattacgggg agatccccgg cacctcgaag gacaaggacg gcaagcccaa
     1621 gaaaaccctg ctcaagcccg ggttcgacac cctgtgcgag gccttccagt tcgcgccgga
     1681 cttcatcaag cagcccgagt cggtcgagac ggacaagttc atcaacctgg tctacaagtg
     1741 cgtgctgact tcgtccaccg gccgcgtggt gacgacgggg atcgggtcct gcaattcgaa
     1801 ggaggagaag taccgctgga agccgggcgt gaagcgcgcc tgcccggctt gcggcagcac
     1861 cacggcactc ctcaagtcca aggatcgccc cgagtggttt tgctgggcga agaaggatgg
     1921 ttgcggcgcg aagttcccgc tcaatgacga gaggatcacc tcccagaagg tcgagcgcga
     1981 ggagaacgac aacgcctgga accaccataa caccctgacc aagatggcac agaagcgcgc
     2041 cggcatggcg gccatcatca ccgcctgcgg gatctc
//
LOCUS       DATGWW010000136         2228 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_321469, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000136 DATGWW010000000
VERSION     DATGWW010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321469"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..336
                     /locus_tag="VK150_02030"
     CDS             <1..336
                     /locus_tag="VK150_02030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30109.1"
                     /translation="DKAKQKATEATAQAVASEIASSAKLMNNPTTSAVMTYVRALPNF
                     TYPNCKNAYTGTVTALTASGAAASDGQVGMVAGTQNDINGDSHNVITVSYKHLKSSGV
                     VTLAAVPVE"
     gene            complement(627..1049)
                     /locus_tag="VK150_02035"
     CDS             complement(627..1049)
                     /locus_tag="VK150_02035"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HLP30110.1"
                     /translation="MKRAQKGFSFIEILLVVVILGILGAIAIPTMLGQKKSAELVGDA
                     QQNAKSLQMMLETRKADTGLYGAAGSVTTWNPDGTVSGTNVAPLFAPKGSTKMTYTLT
                     IGATGLTYDLQGRDNRTGKGNALIFQTDETGRQIYPTP"
     gene            complement(1101..>2228)
                     /locus_tag="VK150_02040"
     CDS             complement(1101..>2228)
                     /locus_tag="VK150_02040"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HLP30111.1"
                     /translation="DAAAATLKRNGVEVMNIRIMAAEGGKSFGKVPPKELAIFTRQFS
                     VMIDAGLPLVQCLEILGAQQQHKGFQRIIEAVRDDVEKGSTLQTALSKHPKAFNDLFV
                     NMVGAGESGGILDVILQRLSGYIEKSVKLTAKVKSAMTYPIAVISIAIIVVVIIMVKV
                     IPVFSAMYSGLGSKLPYPTIVCIAISDAIINYWWLLLGAIALIVVGVRQYYRTTTGHL
                     QIDTLLLHLPVLGDVLRKVAVARFCRTLGTLISSGVPILEGMDITAKTAGNLVIQNAI
                     LKSKDAVEQGRNISAPLAETKVFPPMVVQMVGVGEATGALDAMLAKVADFYEDEVDNA
                     VASLTSLMEPIMIALLGGIVGFIVVAMYMPIFGLAAAFDKS"
BASE COUNT          384 a          721 c          723 g          400 t
ORIGIN      
        1 gacaaggcca agcagaaggc cacggaagcc accgcccagg ccgtggcctc tgagatcgcc
       61 tcctcggcca agctcatgaa caacccgacg acctcggctg tcatgaccta tgtccgcgcg
      121 ctgccgaact tcacctaccc caactgcaag aacgcctaca ccggcaccgt cacggcgctg
      181 accgcctccg gcgccgccgc ctccgatggc caggtgggca tggtggccgg cacccagaac
      241 gacatcaacg gggactccca caacgtgatc accgtcagct acaagcacct caagtccagc
      301 ggcgtcgtca ccttggccgc ggttcccgtg gaatagctgt ccctgctccc atggaaaggg
      361 ccccggttcg gggccctttc catggggaga gatgccagtg gcgcgacccc ttgaggtcag
      421 cctccggccc gtctcctaac ccgcaggccc ctcgccaccc gtcccattgg gtgccctcct
      481 gacatccggc cccggctccc atgcacctgc ccccgggagg gttacttccg tccccgtctc
      541 cgcccagtaa ggccccgggg tccgtcctct gggtgagagg tcggaccccg gcgattcgaa
      601 cgtgaagggc tggtcggtca ggtggatcag ggagtcgggt agatctgccg cccagtctca
      661 tcggtctgga agatcaaggc attgcccttc ccggtgcgat tgtcacggcc ctgcaggtca
      721 taggtgaggc cggtggcgcc gatcgtgagg gtgtaggtca tcttggtgga gcctttgggg
      781 gcgaagagtg gggccacatt ggtgccgctg accgtcccat ccgggttcca ggtcgtcacc
      841 gacccggcgg ctccgtagag gccggtgtcc gccttgcggg tctccagcat catctggagg
      901 gatttggcgt tctgctgggc gtcgcccacc aactcggcgc tcttcttctg cccgagcatg
      961 gtgggaatgg cgatggcccc aaggatgccc aggatcacca ccaccagcag aatctcgatg
     1021 aagctgaagc ctttctgagc ccgtttcatg atgtcctccc gaaccccgaa gggatgcaaa
     1081 tcaccggcca acccggacct tcagctcttg tcgaaggcgg cggcgaggcc gaagatcggc
     1141 atatacatgg ccaccacgat gaagcccacg atgccgccga ggagggcgat catgatgggc
     1201 tccatgaggc tggtgaggct ggccacggcg ttgtccacct cgtcctcgta gaagtccgcg
     1261 accttggcca gcatggcgtc gagggcgccc gtggcctcgc cgacgcccac catctgcacc
     1321 accatgggcg ggaagacctt ggtctcggcc aggggcgcac tgatgttgcg gccctgctcc
     1381 accgcgtcct tggacttgag gatggcgttt tggatgacga ggttgccggc cgtcttcgcc
     1441 gtgatgtcca tgccttcgag aatgggcaca ccggagctga tgagggtgcc cagggtccgg
     1501 cagaaccgcg ccacggcgac cttgcggagc acatcgccca gcaccgggag atgcagcagc
     1561 agggtgtcga tctggaggtg acccgtggtg gtcctgtaat actggcggac gcccaccacg
     1621 atgagggcga tcgcacccag cagcagccac cagtagttga tgatggcgtc ggagatggcg
     1681 atgcagacga tggtgggata gggcagcttg ctgcccaggc ctgaatacat ggcggagaag
     1741 accgggatca ccttcaccat gatgatgacc accacgatga tggcgatgct gatgaccgcg
     1801 atggggtagg tcatggcgct cttgaccttg gccgtgagct tgaccgactt ctcgatgtac
     1861 cccgacaacc gctggaggat gacatccagg atgccgccgc tctcgccggc gcccaccatg
     1921 ttcacgaaga ggtcgttgaa ggccttgggg tgcttggaga gggcggtctg cagggtggag
     1981 cccttctcga cgtcgtcgcg caccgcctcg atgatgcgct ggaagccctt gtgctgctgc
     2041 tgggcgccga ggatctcgag gcactgcacg agcggcagtc cggcatcgat catcacgctg
     2101 aactggcggg tgaagatggc cagttccttc ggtggcacct tgccgaacga cttgccgccc
     2161 tcggcggcca tgatgcggat gttcatgacc tcgacgccgt tgcgtttcag ggtggcggcg
     2221 gcggcgtc
//
LOCUS       DATGWW010000137         1868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_186529, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000137 DATGWW010000000
VERSION     DATGWW010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186529"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..407
                     /locus_tag="VK150_02045"
     CDS             <1..407
                     /locus_tag="VK150_02045"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HLP30112.1"
                     /translation="AGELLDKMIGALGLRREDTYIANVVKCRPPDNRTPSPEEARACM
                     GYLHRQIELIQPAVIVTLGATPLRELVGVGEGITRVRGQWKRVQVGGREIPVMPTFHP
                     AYVLRQYTQEVRRAVWEDLRAAKAWIDQPAQD"
     gene            484..1848
                     /locus_tag="VK150_02050"
     CDS             484..1848
                     /locus_tag="VK150_02050"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP30113.1"
                     /translation="MRLVNVFFIVLLLLVLMVLGNLYLTNHDLLVREVVVFGENIKLQ
                     SVILITFLLGFLLNVLYTGIMEVVRLVRGLNDSANTRLVKRISERMQDARDLVAHGLP
                     REAKDILETILEQRREHIPARMLLGEILMKTGSPDEAVNLFQAICADDPDQVEARYQL
                     AEALMAVRNPDASATVLKQLAADHPKKALRALRRLRAIHMEAQRWEEASEAHKKLLAH
                     FPSELTQGEKAQGSALAYQVGMAKVDADQFKDAAQIFQQVIKDEPEFVPAYLSLGRCM
                     ILQDQEAQGLEILIEGFRKTGEGTFLQEVEDYFIQLGRPEDGLAVMRRVAATSKHATT
                     AKFFLGKMLYRLEILDEALDLFQEVRSQVVYSPILFFFMAKIHSRRARLDAALNEYRQ
                     LLRNLGVLKLRFECAVCGQRTQDYTDRCENCGSWNSSHFLFKESDLPEGPIRGESGSW
                     MAMM"
BASE COUNT          333 a          649 c          596 g          290 t
ORIGIN      
        1 aggcgggcga actgctcgac aagatgatcg gggccctggg cctgaggcgg gaggacacct
       61 acatcgccaa cgtggtgaag tgccggcccc cggacaaccg cacgccctcg cctgaggagg
      121 cacgcgcctg catgggctac ctccatcgcc agatcgagct catccagccc gccgtgatcg
      181 tcaccctcgg cgccacgccc ctgcgcgagc tggtgggcgt cggcgaaggc atcacgcgcg
      241 tgcgcggcca gtggaagcgg gtgcaggtgg gcggccgcga gatccctgtg atgcccacgt
      301 tccaccccgc ctacgtgctg cgccagtaca cgcaggaggt gcggcgcgcc gtgtgggagg
      361 atctgcgcgc ggcgaaggcc tggatcgacc agcccgccca ggattgaggc tgggtccggg
      421 accaggccgt cttgggccgc cgccaacctg tgtcatgcta ggccgagcct tcggggatcg
      481 accatgcgtc ttgtcaatgt gttcttcatc gtgctgctgc tgctggtgct gatggtgctg
      541 ggcaacctgt acctgaccaa ccacgacctg ctggtgcgcg aagtcgtggt gttcggcgag
      601 aacatcaagc tgcagagcgt catcctcatc accttcctcc tcggtttcct gctcaacgtg
      661 ctctacaccg gcatcatgga ggtggtccgg ctggtccggg gcctcaacga ttccgccaac
      721 acccggctcg tgaagcggat ctccgagcgc atgcaggatg cccgggatct cgtggcgcac
      781 ggcctgcccc gcgaggcgaa ggacatcctc gaaacgatcc tcgagcagcg cagggagcac
      841 atccccgcgc ggatgctgct gggcgagatc ctcatgaaga ccggcagccc cgacgaggcc
      901 gtcaacctgt tccaggccat ctgcgcggac gaccccgacc aggtggaggc gcgctaccag
      961 ctggccgagg cccttatggc cgtgcgcaac cccgatgcct ccgccaccgt gctgaagcag
     1021 ctggccgccg atcatcccaa gaaagccctc cgggccctgc gccgcctgcg ggcgatccac
     1081 atggaggcgc agcgctggga ggaagcctcc gaagcccaca aaaagctgct ggcccatttc
     1141 cccagcgagc tcacccaggg cgagaaggcc cagggctcgg ccctggccta ccaggtgggc
     1201 atggccaagg tggacgccga ccagttcaag gacgcagcgc agatcttcca gcaggtcatc
     1261 aaggacgagc ccgaattcgt gcctgcctac ttgagcctgg gacgctgcat gatcctccag
     1321 gatcaggagg cccagggcct ggagatcctc atcgagggct tccggaagac cggcgaaggc
     1381 accttcctgc aggaagtgga ggactacttc atccagctgg gccggcctga agacggtctc
     1441 gcggtcatgc gccgcgtggc cgccacctcg aagcacgcca ccaccgccaa gttcttcctg
     1501 ggcaagatgc tctaccgcct cgaaatcctc gacgaggccc tggatctctt ccaggaggtc
     1561 cgcagccagg tggtctacag cccgatcctc ttcttcttca tggccaagat ccacagccgc
     1621 cgggcccgcc tggacgccgc cctgaacgag taccgccagc tgctccgcaa cctgggcgtc
     1681 ctcaagctgc gcttcgagtg cgccgtctgc ggccagcgca cccaggacta caccgaccgc
     1741 tgcgagaact gcggcagctg gaacagcagc cacttcctct tcaaggaaag cgacctgccc
     1801 gaaggcccca tccgaggcga gtccggcagc tggatggcga tgatgtaaac gcccgccggg
     1861 tgacggag
//
LOCUS       DATGWW010000138         2366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_282182, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000138 DATGWW010000000
VERSION     DATGWW010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282182"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VK150_02055"
     CDS             <1..209
                     /locus_tag="VK150_02055"
                     /inference="COORDINATES: protein motif:HMM:NF020130.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HLP30114.1"
                     /translation="DAAAKRLELDPARMMVNIDKYANTTTATIPTALHQAFEQKRMAK
                     GDLVVLSAFGAGFTWGSTLMRWAY"
     gene            760..>2366
                     /locus_tag="VK150_02060"
     CDS             760..>2366
                     /locus_tag="VK150_02060"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HLP30115.1"
                     /translation="MVEPVRLDDATREIVLRRIRGGIGMVWGVTSMSSLLLFLFSAPP
                     EFRITAWGAFWALLFISAATGASLLHVRQLESAIRTRSLGPDLYRPLTRFPQASSLLF
                     FYLGTCLSTCGYFWVKLRLGQSLWVSLATMGLFLVLAGLGSVCLYFLTKQKLIRVFRL
                     LAAQPGFADSSSRFTTTLGAKFGFGILGITGGVLLVSILVSGLSLKSSIRTKVTAYAR
                     NELINLADSVSFVEEMNTSPEDLNAFLGTLKLGAGGGVSLRLTPARGGGILGSKIQPV
                     GAGDILVVQPLPGGSELRAVIPEAEYADAIWKALWPQVPGLLLAAIFLTYFIRFILRD
                     IQHPLLMLSRNTQQVGEGRIDRLEAVYSDDEVSALVNGFGQMVGSLRGMVVQIRSASR
                     DLAKASAAIRESADGVRQSSQGQRQLIEDFHQEINELTDTSIGISASSMELSLASEST
                     NATIVEMAASVQQINQSMDELLMVVEGITSAIRDFDMAIKNVGKNIDHLAGHAEHTKE
                     FAENLEQSTSAIDDSVKIAQRYTKKVI"
BASE COUNT          362 a          835 c          758 g          411 t
ORIGIN      
        1 tggacgccgc cgccaagcgg ctggagctgg atcccgcccg gatgatggtg aacatcgaca
       61 agtacgccaa caccaccacg gcgaccatcc ccacggccct gcatcaggcc ttcgagcaga
      121 agcgcatggc caagggcgac ctggtggtcc tctcggcctt cggggcgggc ttcacctggg
      181 gctccaccct catgcgctgg gcctactgac ccagccgcgc catgcgggtt gtcgccggat
      241 ccctgaaggg ccgccgcctc gcctcgccgc ccgctgagga ccagcgggtg cgcccgacgg
      301 cggacagggc ccgggaggcc ttattctcta tcctccagcg ctggccctcc ggccccttcc
      361 tcgacctctg cgcgggtacg ggggcggtgg ggctggaggc ccattcccgg ggctacgccc
      421 ccgtggcatg tgtggaggcg ggggagcccg ggtggtcctg cctggtccgg aacctcgggg
      481 gcagccccgt ccaggcgctc cgggcggatg tgaaccggct gccggaggag gctttccgga
      541 cccaggcggt gatcttcctg gatcccccct acgtccaggc gggggagatg tggcaccgga
      601 tggcggcccg cctgaggggt tggctggccc tggagggggt cctggtcttc gaaacggacc
      661 gacggacctt gctggaatta cagcccggct gggcattggc cgaaacacgc gattatggcg
      721 cagcccgatt ccatttctgg atcccgtcct gaattcaggg tggtggagcc tgtccggctc
      781 gacgatgcca cgcgcgagat tgtcctccgg cgcatccgcg gcgggatcgg gatggtctgg
      841 ggcgtcacct ccatgtcgag cctgctcctg ttcctgttct cggcgcctcc ggaattccgg
      901 atcacggcct ggggcgcctt ctgggccctg ttgttcatct ccgccgcgac gggcgcctcc
      961 ctgctgcatg tgcggcagct ggagtccgcc atccgcacca ggtcgctggg gccggacctc
     1021 taccgccccc tgacccggtt cccccaggcc tcttccctgc tgttcttcta cctcgggacc
     1081 tgcctgagca cctgcggcta cttctgggtg aagctccgcc tggggcagag cctctgggtg
     1141 agcctcgcca ccatgggcct gttcctcgtc ctggcgggcc tcggaagcgt atgcctgtac
     1201 ttcctcacca aacagaagct catccgcgtg ttccgcctcc tggccgccca gccgggcttc
     1261 gcagattcct ccagccggtt caccaccacg ctcggcgcca agttcggctt cggcatcctc
     1321 ggcatcaccg ggggagtcct gctcgtctcg atcctcgtct cgggcctgtc gctgaaatcc
     1381 tccatccgga ccaaggtcac ggcctatgcc cggaacgagc tcatcaacct ggccgattcc
     1441 gtgtccttcg tggaggagat gaacacgtcc cctgaggacc tgaacgcctt cctgggcacc
     1501 ctcaagctgg gcgcaggggg tggcgtgtcc ctgcgtctga cgccggcccg gggaggcggc
     1561 atcctgggct cgaagatcca gcccgtgggg gccggcgaca tcctggtggt ccagcccctt
     1621 cccggtggtt cggagctgag ggccgtcatc cccgaggccg agtacgccga cgccatctgg
     1681 aaggccctct ggccccaggt gccgggcctg cttctggcgg ccattttcct cacctacttc
     1741 atccgcttca tcctgcgcga catccagcac ccgctcctca tgctgagccg gaacacccag
     1801 caggtgggcg aaggccgcat cgaccgtctg gaggcggtct atagcgacga cgaggtctcc
     1861 gccctggtca acgggttcgg ccagatggtg ggcagcctcc ggggcatggt ggtgcagatc
     1921 cgttccgcga gccgggacct ggccaaggcc tccgccgcca tccgcgaatc cgccgacggg
     1981 gttcggcaat ccagccaggg acagcgccag ctcatcgagg atttccacca ggagatcaac
     2041 gagctgacgg atacctccat cggcatcagc gccagctcga tggaactcag cctggcctcc
     2101 gagagcacca acgccaccat cgtggagatg gctgccagtg tgcagcagat caaccagagc
     2161 atggacgagc tcctcatggt cgtggagggc atcacctccg ccatccgcga cttcgacatg
     2221 gccatcaaga acgtgggcaa gaacatcgac cacctcgcgg gtcacgcgga gcacaccaag
     2281 gagttcgccg agaacctcga gcagagcacc tcggccatcg acgacagtgt gaagatcgcc
     2341 cagcgctaca ccaagaaggt gatcca
//
LOCUS       DATGWW010000139         1722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_10433, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000139 DATGWW010000000
VERSION     DATGWW010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10433"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1150
                     /locus_tag="VK150_02065"
     CDS             <1..1150
                     /locus_tag="VK150_02065"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP30116.1"
                     /translation="VGAVAVGLLLSGVDRAIVSVQKRILFGGLLGFAAGILGAMYLAG
                     RIKRILLGMEPQEISTLLQQREAMLHSVREGVLGVDQDLNVTIVNEEALRLFALAGSH
                     GELVGRPVEEVLPSSRLRTVIETGQAEYDQEGDILGLPILTNRVPVLVDGRIAGALAT
                     FRDKSEVNRLAEQLTGVRFYADALRAQTHEFMNKLHVILGLVRLGEHERLQTFITGVA
                     GRLDDEVGFVVQRIKDPVVAGFLLARFSSAREQNILMQLDQDASLPPCADDAVSHDLV
                     TVLGNLLENAVEAIGDGLRREIRVSLRPEGELLHLSVADTGPGLPEDVLAQAFVRGFS
                     TKGEKRGLGLWQAARTVEARGGHLKGENRAEGGAAFTASIRLFPGEDA"
     gene            1147..>1722
                     /locus_tag="VK150_02070"
     CDS             1147..>1722
                     /locus_tag="VK150_02070"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30117.1"
                     /translation="MIRVLLVEDDPMVAELNRMYLSRVEGFDTVASLRTAPEALDLLR
                     ERPVDLLLLDIFMPGQSGIELMGEIRKLGLDVDVIFVTAARDTATIDRALKLGAVDYL
                     IKPFEFERLKQALEHYRESRHMIRRGEALDQVELDKRLARRPATDRRAESLPKGLDRN
                     TLEKVLKAITDWPEASPWFTSEEIGHQVGISR"
BASE COUNT          266 a          588 c          611 g          257 t
ORIGIN      
        1 ggtgggcgcc gtggccgtgg gcctcctgct gtcgggcgtg gaccgcgcca tcgtgagcgt
       61 gcagaagcgc atcctcttcg gcgggctcct cggcttcgcc gcgggcatcc tcggcgcgat
      121 gtacctggcc ggccgcatca agcggatcct cctgggcatg gagccccagg agatctcgac
      181 cctgctgcag cagcgggagg ccatgctcca ctcggtgcgc gaaggcgtcc tcggcgtgga
      241 ccaggacctg aacgtcacca tcgtcaacga agaggccctg cggctgttcg ccctggccgg
      301 aagccacggc gagctggtgg gccgccccgt ggaggaggtc ctgccgagct cccggctcag
      361 aaccgtcatc gagacaggcc aggcggagta cgaccaggag ggcgacatcc tgggccttcc
      421 catcctgacg aaccgcgtgc ccgtgctggt ggacggccgc atcgccgggg ccctggccac
      481 gttccgggac aagtccgagg tgaaccggct ggcggaacag ctcaccggcg tccgcttcta
      541 cgcggacgcg ctgcgggctc agacccacga gttcatgaac aagctccacg tgatcctcgg
      601 cctcgtccgg ctcggcgagc acgagcgcct ccagaccttc atcaccgggg tggctgggcg
      661 gctggacgac gaggtgggct tcgtggtgca gcgcatcaag gatcccgtcg tggccggatt
      721 cctgctcgcc cggttctcct cggcgcggga gcagaacatc ctcatgcagc tggaccagga
      781 tgcttcgctg ccgccctgcg cagacgacgc cgtgtcccac gacctcgtca ccgtcctggg
      841 caacctgctg gagaacgcgg tcgaggcgat cggggacggt ctccggcggg agatccgggt
      901 gtccctgcgg ccggaggggg agctgctgca cctgtccgtc gcggacacgg gccccggcct
      961 ccccgaggac gtattggccc aggccttcgt ccgcggcttc tccaccaagg gggagaagcg
     1021 cggcctcggg ctctggcagg cggcccgcac cgtcgaggcg aggggcgggc atctcaaggg
     1081 agaaaaccgg gccgaggggg gcgcggcgtt cactgcgtcg atccggttgt tcccagggga
     1141 ggacgcatga tccgggtcct gctggtcgag gacgatccga tggtcgccga gctcaatcgg
     1201 atgtacctga gccgggtgga gggcttcgac accgtggcct ccctgcgcac cgcgccggag
     1261 gcgctggacc tgctccgaga acgtccggtc gacctgctgc tgctggacat cttcatgccc
     1321 gggcagagcg gcatcgagct gatgggcgag atccggaagc tgggcctgga tgtggacgtg
     1381 atcttcgtga cggccgcccg ggacaccgcg accatcgacc gggccctgaa gctgggggcg
     1441 gtggactacc tcatcaagcc cttcgagttc gaacgtctca agcaggctct ggagcactac
     1501 cgcgaaagcc gccacatgat ccggcgcggc gaggccctcg accaggtcga gctcgacaag
     1561 cgcctggccc gtcgccccgc cacggaccgg agggccgaat cgctgcccaa ggggctcgac
     1621 cggaacaccc tcgagaaggt cctgaaggcc atcaccgact ggccggaggc ctccccctgg
     1681 ttcaccagcg aggagatcgg ccaccaggtg ggcatctcgc gg
//
LOCUS       DATGWW010000140         1696 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_237465, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000140 DATGWW010000000
VERSION     DATGWW010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237465"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..994)
                     /locus_tag="VK150_02075"
     CDS             complement(<1..994)
                     /locus_tag="VK150_02075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30118.1"
                     /translation="MARSAALLEDATAIRMALQRLCLAGARLDVAYKSQRASYPILTE
                     DGERLAFRMPFDDITSWALAPGENLAVKLKDRGLEYECVVAYEGQDVMEGAEVCLATV
                     PRVLRRSDMHRLADFIPDQLQVKAHAATFTNTRNALIDGTVQSFGEEGLELVLRNARQ
                     DVRELLRMGEESLLDVPLDNNLRLRAPTTVAYFGDNLVGLRFTKQADPGMLGQYRTWI
                     QDQQLLQAQQDKDDFSPRGFQEATARINRAAALPTVKVIVDRDPMILLLTEKEDFARR
                     LGEALSRKFGLAMLDHIKGPVKAQIKDLCGTDGGWGRVRMVLIHNQLRLASPLEL"
     gene            complement(996..>1696)
                     /locus_tag="VK150_02080"
     CDS             complement(996..>1696)
                     /locus_tag="VK150_02080"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30119.1"
                     /translation="APAGADPAGWLRGVRRPGAMVLTGPGTLEGVLEAAGDCAVVHVS
                     PLYRPELREAAARQGVRTFLTLPARPSQLRSLLEPEGLAIAGDTAAAAPQVIGEPTKV
                     RVLLAEDNLVNQKVAMVMLKRLGIEVDVVATGIEALDALVGVAYDLVLMDCQMPEMDG
                     FEATRRIRERERGSRRLPVVAMTANAMVGDRERCLAAGMDDHIPKPVRMDVLHRALSR
                     WLPAGAVPALGGGI"
BASE COUNT          240 a          592 c          601 g          263 t
ORIGIN      
        1 agagctcgag ggggctcgcc agacgcagct ggttgtggat gagcaccatg cgcacccggc
       61 cccagccgcc gtccgttccg cagagatcct tgatctgggc tttcaccggc cccttgatgt
      121 ggtcgagcat ggccaggccg aacttgcggc tgagcgcttc gcccagccgc cgggcgaagt
      181 cctccttctc ggtgaggagc aggatcatgg gatcccggtc cacgatgacc ttcaccgtgg
      241 gcagggccgc ggcgcggttg atgcgtgccg tggcttcctg gaagccccgg ggggagaagt
      301 catccttgtc ctgttgggcc tggaggagct gctgatcctg gatccaggtg cggtactgcc
      361 ccagcatgcc gggatcggcc tgcttggtga accgcaggcc caccaggttg tcgccgaaat
      421 aggccacggt ggtcggcgcc cgcaggcgca ggttgttgtc caggggcacg tcgagcaggg
      481 actcctcgcc catgcgcagg agctcccgga catcctgccg ggcgttccgc agcacgagtt
      541 ccaggccctc ttcgccgaag ctctgcacgg tgccgtcgat gagggcgttc cgggtgttgg
      601 tgaaggtggc ggcgtgggcc ttcacctgga gctggtcggg gatgaagtcc gccaggcggt
      661 gcatgtcgga gcggcgaagc acccggggca ccgtggccag gcagacctcc gcgccctcca
      721 tcacgtcctg gccctcgtag gccaccacgc attcgtactc gaggccgcgg tccttcagct
      781 tgaccgccag gttctccccg ggcgccaacg cccagctggt gatgtcatcg aagggcatgc
      841 ggaaggcgag ccgctcgccg tcttcggtca ggatggggta cgaggcgcgc tgggacttgt
      901 aggcgacatc caggcgcgcg ccggccaggc agaggcgctg cagcgccatg cggatggcgg
      961 tggcatcttc aagcagggca gccgatcgcg ccatatcaga ttcctcctcc cagggccggc
     1021 acagcccccg cgggcagcca gcgcgacagc gcccggtgca gcacatccat ccgcacgggc
     1081 ttgggaatgt ggtcgtccat gcctgccgcg aggcagcgct cgcggtcgcc caccatggcg
     1141 ttggccgtca tcgccaccac gggcaggcgg cggctgccgc gctcccgctc gcggatgcgg
     1201 cgggtggctt cgaagccgtc catctcgggc atctggcagt ccatcagcac caggtcgtag
     1261 gccacgccca cgagggcgtc cagagcctcg atgcccgtgg ccaccacgtc gacctcgatg
     1321 ccaagccttt tcagcatcac catcgccacc ttctggttca cgaggttgtc ctcggcgagc
     1381 agcacccgca ccttggtggg ttcgccgatc acctggggcg ccgcggccgc ggtgtccccg
     1441 gcgatggcga ggccctcggg ctccaggagg ctgcggagct ggctgggccg cgctggaagg
     1501 gtgaggaagg tccggacgcc ctggcgggcg gcggcctccc ggagctctgg gcggtacagg
     1561 ggactcacgt gcaccaccgc gcagtccccg gccgcctcca ggaccccctc cagggtgccg
     1621 gggccggtca ggaccatcgc cccgggacgg cgcacgccgc gcagccaccc ggcaggatcc
     1681 gccccggccg gggcca
//
LOCUS       DATGWW010000141         2505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_321814, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000141 DATGWW010000000
VERSION     DATGWW010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321814"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /locus_tag="VK150_02085"
     CDS             <1..251
                     /locus_tag="VK150_02085"
                     /inference="COORDINATES: protein motif:HMM:NF016825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cyclodeaminase/cyclohydrolase family protein"
                     /protein_id="HLP30120.1"
                     /translation="AARLGKVASITDAAVGAQMAHAGVRGGVWNVIINLKDITDGAYV
                     AHMQDQCADLLAKAEGKLAEVTAYVDQKLLDRLNKARK"
     gene            complement(312..770)
                     /locus_tag="VK150_02090"
     CDS             complement(312..770)
                     /locus_tag="VK150_02090"
                     /inference="COORDINATES: protein motif:HMM:NF028509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HLP30121.1"
                     /translation="MRKTWGFLTLAVAVAFPLAAQTRDQAKAFVKQAVEFAKKNPKDK
                     FLEEVSGPKGQFHFTKGQNNDLYIFVYDLEGKVLAHGVRRELVGINRWTAKDPDGKPW
                     IQDWTKLVKEKGSGWIEYKELNPAQGNKVMKKASWVELQNGMVIGAGIYE"
     gene            942..2477
                     /locus_tag="VK150_02095"
     CDS             942..2477
                     /locus_tag="VK150_02095"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HLP30122.1"
                     /translation="MKRSGLALKFFLPVALSLVTLLGLAIWAATAYQTSRTEKAFEEQ
                     LTALAVASGSMFHADAEDYCRSRGMAFHRVLEQRRSEDPATAAFELESMAAFAANPAL
                     QARTAQLQDKSGAPRLYVLSPGRLKDSCIQCHSAFGIDAFKDRKAGELVASFGVSMST
                     AELYRSERNMRLVAGAGGLALLVLISSMIARQVRVSILRPLDELSSAISQVAAGDMTV
                     TAPVGSQDELGQLATTFNGMVADLNGALGNMGQASERVASGSTELAASSEQMSATVQE
                     TARVGEDLRQAGREVQEALSRLDANVEAMAEHTRRTGLRAEEAVGDTDRGALTGRGTA
                     EGMAAIQEATSRIVETVQAIQGIARQTNLLSLNAAIEAAKAGAMGKGFAVVAEEVRIL
                     ADRSGQSAKAIEEIIQAMEAAVSGGVDSVEVTLQHLEAIRDRISQVSASIQEIAGLSQ
                     GQARTSQDVGRMMNQTAARLDQNAAATQQLAATVQQVSNTADDLSKVAEGLRETVQKF
                     RLR"
BASE COUNT          432 a          876 c          814 g          383 t
ORIGIN      
        1 aagcggcccg cctgggcaag gtggcctcca tcaccgacgc ggcggtgggc gcccagatgg
       61 cccatgcggg cgtgcgcggc ggcgtctgga acgtgatcat caacctcaag gacatcaccg
      121 atggcgccta cgtggcccac atgcaggacc agtgcgcgga cctgctggcc aaggccgagg
      181 ggaagctcgc cgaagtcacg gcctacgtgg accagaagct gctcgaccgg ctgaacaagg
      241 ccaggaagta gcgaaaatcc caacgacgga agggggcctc gcggccccct tctcgcgtac
      301 tggaaccagg cctactcgta gatgccggcg ccgatgacca tgccgttctg gagttccacc
      361 caggaggcct tcttcatcac cttgttgccc tgggcggggt tgagttcctt gtactcgatc
      421 cagccactgc ccttctcctt gaccagcttg gtccagtcct ggatccaggg cttgccgtcc
      481 ggatccttgg cggtccagcg gttgatgccc accagctcgc gccggacccc gtgggccagg
      541 accttccctt ccaggtcgta gacgaaaatg tagaggtcat tgttctgccc cttggtgaag
      601 tggaactggc ccttgggtcc gctcacctcc tccaggaact tgtccttggg gttcttcttc
      661 gcgaactcca cggcctgttt cacgaaggcc ttggcctgat cgcgggtctg agccgccagc
      721 ggaaacgcaa ctgcgaccgc cagtgtcagg aatccccatg tcttccgcat gtttcctcca
      781 agtcgcccca catggggcat gccgggtttt tcgggtcagc atcctgccac cttgaaaatc
      841 gggatcggtc acaactgaac gccagcaatt caaccctctc agacaggaag ccgaaaggaa
      901 cggagaggcg tggcgcggtt gcacgtcggg gagccacgaa catgaaacgg tctggcctag
      961 cgttgaaatt cttcctgccg gtcgccctct ccctggtaac cctgctgggg ctggccatct
     1021 gggcagcgac ggcctatcag acctcccgga ccgagaaagc cttcgaggaa cagctgaccg
     1081 ccctggcggt ggcctccggg tccatgttcc acgccgatgc cgaggactat tgccgcagcc
     1141 ggggcatggc tttccaccgg gtgctggagc agcgacgctc cgaagatccc gccaccgccg
     1201 ccttcgagct cgaatccatg gccgccttcg ctgccaaccc cgccctgcag gcgcggacgg
     1261 cacagctcca ggacaagagc ggtgcgcccc ggctctacgt cctgagcccg ggccgcctga
     1321 aggattcctg catccagtgc cacagcgcct tcggcatcga cgccttcaag gaccggaagg
     1381 ccggcgagct ggtggcttct ttcggcgtgt ccatgtccac cgccgagctt taccggagcg
     1441 agcggaacat gcggctggtc gccggggccg ggggcctggc cctgctcgtc ctcatcagct
     1501 ccatgatcgc ccgccaggtg cgggtctcca tcctccgccc cctcgacgag ctctccagcg
     1561 ccatcagcca ggtggccgcc ggcgacatga ccgtgaccgc gcccgtgggc agccaggacg
     1621 agctcggcca gctggcgacc accttcaacg gcatggtggc ggatctcaat ggcgccctgg
     1681 gcaacatggg ccaggcctcg gagcgcgtgg cctcgggcag caccgagctg gccgccagct
     1741 ccgagcagat gagcgccacc gtgcaggaaa ccgcccgggt gggcgaggac ctgcgccagg
     1801 ctggacggga agtgcaggag gccctcagcc gcctggacgc gaacgtggaa gccatggccg
     1861 agcatacccg ccgcacgggc ctgcgggccg aggaggccgt gggggacacg gaccgcggcg
     1921 ccctgaccgg ccggggcacg gccgagggca tggcggccat ccaggaggcc acctcccgca
     1981 tcgtcgagac cgtgcaggcc atccaaggca tcgcccgcca gacgaacctg ctgtcgctca
     2041 atgccgccat cgaggccgcc aaggccggcg ccatgggcaa gggcttcgcc gtggtggccg
     2101 aagaagtccg catcctcgcc gaccgcagcg gccagtccgc caaggccatc gaggagatca
     2161 tccaggccat ggaagccgcg gtctcgggcg gggtggacag cgtcgaggtg acccttcagc
     2221 acctggaggc catccgggat cgcatctccc aggtgtccgc cagcatccag gagatcgcgg
     2281 gcctcagcca gggccaggcc aggaccagcc aggacgtggg ccggatgatg aaccagaccg
     2341 cggcccggct ggatcagaac gccgccgcca cccagcagct ggccgccacg gtgcagcagg
     2401 tgtccaacac cgcggacgac ctctccaagg tggccgaggg cctccgcgag accgtccaga
     2461 agttccggct gcgataatcc cggtgggccg gattcccggc ccgcc
//
LOCUS       DATGWW010000142         2794 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_321938, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000142 DATGWW010000000
VERSION     DATGWW010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2794
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321938"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            303..962
                     /locus_tag="VK150_02100"
     CDS             303..962
                     /locus_tag="VK150_02100"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HLP30123.1"
                     /translation="MPPHATLILGHRGLSASHLENSMEAFRAALAVGMDGFELDVQPT
                     RDGVCLVLHDEDLARTANGAGLLRQMKAAELPPLKNGEPLPRLADVLELPAKLINVEL
                     KGEPGWQQALATVEAAEALDRVLFSSFEHSEVLQLWAACEGARCGFLWETDEALELSA
                     EELADLPEALWFHPPLKAVKARPELWNPYAQRLAVWGMPSAAEAKGLPFAPAVLIADG
                     L"
     gene            1064..1531
                     /locus_tag="VK150_02105"
     CDS             1064..1531
                     /locus_tag="VK150_02105"
                     /inference="COORDINATES: protein motif:HMM:NF018430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1203 domain-containing protein"
                     /protein_id="HLP30124.1"
                     /translation="MSFRVTPIPAAISEEARRTQRSPGFHGHLIQIHVATAKGYGPCR
                     SCLRRTREGERRLFMSYNPYPEAEQVPVVGPIYIHEDPCEPFAGPGFPDELRGLPMVL
                     RGHYQDGSTIVNVKLGDQSPEAAIETLFQDDRIAYIAIQNPEAACFIARVERA"
     gene            1545..1913
                     /locus_tag="VK150_02110"
     CDS             1545..1913
                     /locus_tag="VK150_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLP30125.1"
                     /translation="MSGSDLRMDHVAVKVPDLAAEVARWRGLGHEATCSDPAMAIVHF
                     ADGTRLALLGPGSPHPNHVALRLSDADRFAELAQQEGGEAEVHPDGSLSFYAKGGPGL
                     AVEWVWRPAPATAAPLTGTE"
     gene            1913..2758
                     /locus_tag="VK150_02115"
     CDS             1913..2758
                     /locus_tag="VK150_02115"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:TIGR00589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HLP30126.1"
                     /translation="MALSDYAKVEKALRFLRQHTAQQPSLAEVAAEVGLSEFHFQRLF
                     QRWAGVSPKRFLQYLTLQEAKRLLRESRSVLEASLEVGLSGTGRLHDLFLSLERMTPG
                     KYKNQAAGLRLGWGVADTPFGPALFAGMERGLCGVDFLLDDGADGALARLRDRWPGAR
                     LEAVPALARHHAEALAARLEGHPAPLGLVLKGTPFQLQTWEALLRIPEGHALSYGDLA
                     TLGGTPGASRAVGTALGHNPIAVLIPCHRVIQATGACGDYRWGGARKQALLAFERARL
                     EARSA"
BASE COUNT          414 a         1059 c          924 g          397 t
ORIGIN      
        1 gccaggtcgg cgatgacgat gtccaccggg tcccggccaa ggaaggccag cgcctcagcg
       61 ccggtggagg ccacgaggac ctcccaggtc cggtgggcct gccagaaggc ccgccgcgtc
      121 tgcaggagca ggtcgccgtc accgtccgcc aggaggatcc gcatggttcc attccccact
      181 cgaccgcccc ggggcggttc cccatcatcg gtccgacggg tcccctgggc gagggccgtc
      241 cagaagattc ctcgatccag ccgattccag gcagaatcaa gcctccgccc tccggagccg
      301 ccatgccccc ccatgccacc ctcatccttg gccatcgcgg cctgtccgcc tcgcacctgg
      361 aaaactccat ggaggccttc cgggctgccc tggccgtggg catggacggc tttgagctgg
      421 acgtgcagcc aacccgagac ggggtctgcc tggtgctgca cgacgaggac ctggcccgca
      481 cggcgaacgg agccggcctg cttcggcaga tgaaggccgc cgagctgccg cccctgaaga
      541 atggcgaacc cctgccgcgc ctggccgacg tgctggaatt gcccgcgaag ctcatcaacg
      601 tggaactcaa gggcgagccg ggctggcagc aggccctcgc caccgtggag gccgccgagg
      661 ccctggaccg ggtgctcttc agcagcttcg agcacagcga ggtcctccag ctctgggccg
      721 cctgcgaagg cgcccgctgc ggcttcctgt gggagactga cgaggccctg gagctgagcg
      781 ccgaagagct ggccgacctg ccggaagccc tctggttcca cccgcccctg aaagccgtga
      841 aggcacggcc cgaactctgg aacccctacg cccagcgcct ggccgtctgg gggatgccgt
      901 ccgccgccga ggccaagggg ctgcctttcg ccccggccgt gctgatcgcc gacgggctct
      961 gaaccttcgc cggccaggac aggtcaccgc aagaaccggg tcgcccgccc accccggcgc
     1021 ccccaccttg aaggcatcac gccagtgacc ttcagaggtg accatgagct tccgagtgac
     1081 ccccatcccc gccgccatct ccgaagaggc ccggcgcacc cagcgttccc ccggcttcca
     1141 tggccacctg atccagatcc acgtggccac cgccaagggt tacggcccct gccggtcctg
     1201 cctgcggcgc acccgggagg gtgagcgccg gttgttcatg agctacaacc cctacccgga
     1261 agccgaacag gtgccggtgg tcggtcccat ctacatccac gaggatcctt gcgaaccctt
     1321 cgccggaccg ggattccccg acgaactgcg gggcctgccc atggtgctgc gaggccatta
     1381 ccaggacggc tccaccatcg tgaacgtgaa actgggcgat caaagccctg aggccgccat
     1441 cgaaaccctg ttccaggatg accggatcgc ctacattgcc atccagaacc ctgaggccgc
     1501 ctgcttcatc gcccgtgtcg aacgcgccta ggatggaggc tcccatgtcc ggttccgatc
     1561 tgcggatgga tcacgtggct gtgaaggtgc ccgatctcgc ggcggaagtg gcgcgctggc
     1621 gcggcctcgg ccatgaagcc acctgcagtg atcccgccat ggccatcgtg cacttcgccg
     1681 atggcacacg cctggccctt ctggggcccg gatcgccgca cccgaaccac gtcgccctcc
     1741 gcctctccga tgccgatcgg ttcgcggagc tcgcgcagca ggagggtggc gaggccgagg
     1801 tccacccgga tggctcgctc agcttctacg ccaagggcgg ccccgggctc gccgtggaat
     1861 gggtctggcg ccccgcgccc gcaaccgccg cccccctgac aggaaccgag tgatggccct
     1921 cagcgactat gccaaggtgg aaaaggccct gcgcttcctg cgccagcata cggcgcagca
     1981 gccttcgctc gcggaggtgg cggcggaggt gggcctcagc gagttccact tccagcggct
     2041 cttccagcgc tgggcggggg tgagccccaa gcgcttcttg cagtacctga ccctgcagga
     2101 ggcgaagcgg ctgctgcggg agtcccgcag tgtgctggag gccagcctcg aggtgggcct
     2161 gtcgggcacc ggccgcctgc acgacctctt tctcagcctc gaacgcatga ccccgggcaa
     2221 gtacaagaac caggccgcgg gcctgcggct cggctggggc gtggccgaca cacccttcgg
     2281 cccggccctc ttcgcgggca tggagcgagg gctctgcggg gtggatttcc tgctggacga
     2341 cggcgcggac ggggccctcg cgcggctgcg cgaccgctgg cccggcgccc ggctcgaggc
     2401 cgtccccgcc ctggcccgcc accacgcgga ggccctcgcg gcccgcctgg agggccaccc
     2461 cgcccccctc ggcctggtgc tcaagggcac gcccttccag ctgcagacct gggaggccct
     2521 gttgcgcatc cccgagggcc acgccctgtc gtacggcgac ctggcgaccc tgggcggcac
     2581 acccggcgcc agccgcgccg tgggcacggc cctgggccac aaccccatcg ccgtgctgat
     2641 cccctgccac cgggtcatcc aggccaccgg cgcctgcggc gactaccgct ggggcggggc
     2701 ccgcaagcag gccctgctgg ccttcgagcg ggcgcggctg gaggcccgct cggcctaatc
     2761 ggccaggagc cgtcggcgca ggtccgacgg ctcc
//
LOCUS       DATGWW010000143         2996 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_237584, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000143 DATGWW010000000
VERSION     DATGWW010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2996
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237584"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2701
                     /gene="dnaE"
                     /locus_tag="VK150_02120"
     CDS             <1..2701
                     /gene="dnaE"
                     /locus_tag="VK150_02120"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004226.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HLP30127.1"
                     /translation="VPEGYDLESYFVHVAKETFEQRLQECRPLWQQGALKHAEEKYRE
                     RLAFELDMILKMGFPGYFLLVWDFIRKAREMGVPVGPGRGSAAGSIVAWSMKITDIDP
                     MQYDLLFERFLNPERVSMPDVDIDFCRDGRQKVIDYVTEKYGQDKVSSIVTINQLKTK
                     AVIKDVARVFEKDFAFANNLTKLVPQEPGKPITVGEALEKSDKLRELYETDPEVKNIL
                     DISARLEGLSRNTGVHAAGVIIAPDELTQFAPLSMDKDKKVMVQYTMVEAERAGLLKM
                     DFLGLETLTQIAKTQEVIARRHGQPKDMTTIRTFDDKKTFELFAAGDTDGVFQFESGG
                     MKQLLRQLGPDRFDDLIALNALFRPGPLGAGMGTTYVERRHGREPVTYLFPDLEPILS
                     PTYGVILYQEQVMQIASLVAGYSLGEADMLRRAMGKKDKEKMAKEKTKFIERGAERKY
                     DKAKVAEMFDLIEYFAGYGFNKSHSAAYAMVAYETAYLKANYPVEFMAGLLSTKSGRT
                     DDVAKYVQNCRERGIEVLGPDINESALDFTATSDRQIRFGFAAVKGLGDAALQAILEA
                     RQAEGGFKDLFHALKSTDLQKANRKVWESLIKAGAFDSLEPNRAALLQGLPDAVSAAS
                     RGTGDTGMTSLFDDAEMATLSEDWRVPENIEPWDRKTRLAAEREVLGLFVSGHPLEEF
                     ADAIQVHTHGTLAKVMEDVASGRLRDRNEVTIGAMVSTVAFKTNQKGEPWAILQVEDL
                     AGKMEVLLMASKWDPVTKKPGGRPFERFRHLAVPEAMLRITGELRVETIQGNGNGVAE
                     GEEEEEQTVVKIFATLLEPLEAFQGMGFTGALVRLPPGECPPRMAALLADHKGELPVT
                     FEYRSKEGLVARVRASRDLRLKHDPDLAEKLAKETGCALTWTY"
     gene            2728..>2996
                     /locus_tag="VK150_02125"
     CDS             2728..>2996
                     /locus_tag="VK150_02125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30128.1"
                     /translation="MAKASPIPPDLHDVIEALAAAATSLTEMPLGRREFPSRTALAAL
                     VEELRALLFPGYFGPSELTGDTLRYHLGARLDRVLHGFRDQIQRGL"
BASE COUNT          558 a         1053 c          965 g          420 t
ORIGIN      
        1 cgtgccggaa ggctacgacc tggaatcgta cttcgtgcat gtcgcgaagg agaccttcga
       61 gcagcgcctc caggaatgcc gtcctctctg gcagcagggc gccctgaagc acgcggagga
      121 gaaataccgc gagcggctcg ccttcgagct ggacatgatc ctcaagatgg ggttccccgg
      181 ctacttcctg ctggtctggg atttcatccg gaaggcccgg gagatgggcg tgcccgtggg
      241 ccccggccgc ggctcggcgg cgggcagcat cgtggcctgg tccatgaaga tcaccgacat
      301 cgaccccatg cagtacgacc tgctgttcga gcgcttcctg aacccggagc gcgtgtccat
      361 gcccgacgtg gacatcgact tctgccggga cgggcggcag aaggtcattg actacgtcac
      421 cgagaagtac ggccaggaca aggtgagcag catcgtcacc atcaaccagc tcaagaccaa
      481 ggccgtgatc aaggacgtgg cgcgggtctt cgagaaggac ttcgccttcg ccaacaacct
      541 caccaagctc gtgccccagg agcccggcaa gcccatcacg gtgggcgagg cgctcgagaa
      601 gagcgacaag ctccgggagc tgtacgagac cgatcccgag gtgaagaaca tcctcgacat
      661 ctcggcgcgc ctcgagggcc tgtcgcggaa cacaggtgtc cacgccgcgg gcgtcatcat
      721 cgcccccgac gagctcaccc agttcgcgcc gctcagcatg gacaaggaca agaaggtgat
      781 ggtgcagtac accatggtgg aggccgaacg ggcgggcctg ctgaagatgg acttcctcgg
      841 gctggagacg ctcacccaga tcgccaagac ccaggaggtg atcgcgcggc gccacggcca
      901 gcccaaggac atgaccacca tccggacctt cgacgacaag aagaccttcg agctcttcgc
      961 cgccggggac acggacggcg tgttccagtt cgagtccggc ggcatgaagc agctgctgcg
     1021 ccagctgggc cccgaccgct tcgacgacct catcgcgctc aacgcgcttt tccgcccggg
     1081 gccgctcggc gcgggcatgg gcaccaccta cgtggagcgc cgccacggcc gcgagcccgt
     1141 cacctacctt ttccccgacc tggagcccat cctctccccc acgtacggcg tgatcctcta
     1201 ccaggagcag gtgatgcaga tcgccagcct ggtggcgggc tactcgctgg gcgaagccga
     1261 catgctgcgc cgcgccatgg gcaagaagga caaggagaag atggcgaagg aaaaaacaaa
     1321 gttcatcgag cggggcgccg agcggaaata cgacaaggcc aaggtcgccg agatgttcga
     1381 cctcatcgaa tacttcgcgg gctacggctt caacaagagc cacagcgccg cctacgccat
     1441 ggtggcctac gagaccgcct acctgaaggc aaactacccc gtggagttca tggcgggcct
     1501 gctctccacc aagtcgggcc gcacggacga cgtggccaag tacgtgcaga actgccggga
     1561 gcggggcatc gaggtgctgg gccccgacat caacgaatcg gccctggatt tcacggccac
     1621 ctccgaccgc cagatccgct tcggcttcgc cgccgtgaag ggcctgggcg acgccgccct
     1681 gcaggccatc ctcgaggccc gccaggccga gggcggcttc aaggacctct tccacgccct
     1741 caagagcacc gacctgcaga aggccaaccg caaggtctgg gaatccctca tcaaggccgg
     1801 ggccttcgac agcctggagc ccaaccgcgc cgccctgctg cagggcctgc cggacgccgt
     1861 gtcggccgcc tcgcggggca cgggcgacac cggcatgacc agcctcttcg acgacgcgga
     1921 gatggccacc ctcagcgagg actggcgtgt gcccgagaac atcgaaccct gggaccgcaa
     1981 gacccgcctc gccgccgagc gcgaggtgct cggcctcttc gtgagcggcc acccgctgga
     2041 ggagttcgcc gacgccatcc aggtgcacac ccacggcacc ctcgccaagg taatggagga
     2101 cgtggcctcc ggccgcctgc gggaccgcaa tgaggtcacc atcggcgcca tggtctccac
     2161 cgtggccttc aagaccaacc agaagggcga gccctgggcg atcctccagg tggaggacct
     2221 ggcggggaaa atggaagtgc tgctcatggc cagcaagtgg gatcccgtca ccaagaagcc
     2281 cggcgggcgg cccttcgagc gcttccggca cctggccgtg cccgaggcca tgctgcgcat
     2341 caccggcgag ctgcgggtgg agaccatcca gggcaacggc aacggcgtgg ctgaaggcga
     2401 agaggaagag gaacagaccg tggtgaaaat cttcgccacc ctgctggagc cgctggaagc
     2461 cttccagggc atgggcttca ccggcgccct tgtgcgcctg cccccgggcg agtgcccgcc
     2521 ccgcatggcc gccctcctcg ccgaccacaa gggcgagctg cccgtcacgt tcgaataccg
     2581 gtcgaaagag ggcctggtgg cccgggtgcg ggccagccgc gacctgcgcc tgaagcacga
     2641 ccccgatctg gcggagaagc tggccaagga aaccggctgc gcgctgacct ggacctactg
     2701 aggtcccgcc ggagtatcct cactcccatg gcgaaggcat cccccatccc ccccgacctt
     2761 cacgacgtca tcgaggccct ggccgccgcg gccacctccc tcaccgagat gcccctgggc
     2821 cggcgggaat tcccgtctcg cacggcgctg gcggccctgg tggaggagct ccgcgccctg
     2881 ctcttccccg gctacttcgg cccctccgag ctcacgggcg acaccctccg gtaccacctg
     2941 ggcgcccgcc tggaccgggt gctgcacggt ttccgcgacc agatccagcg gggcct
//
LOCUS       DATGWW010000144         2226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_57422, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000144 DATGWW010000000
VERSION     DATGWW010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57422"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VK150_02130"
     CDS             <1..411
                     /locus_tag="VK150_02130"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HLP30129.1"
                     /translation="LPKYQTSADGILNRRGFTERGFRFGALEDLLGKVQKGEVKAVVV
                     LHDAAFTSSKEADLLGQILKAAPFSLALEFEASDLGRAATAWLPITSFAEESDFIVNH
                     DGELRRYQKAIQPPKGVRTVPAWVKDLAAVPVPA"
     gene            complement(478..1260)
                     /locus_tag="VK150_02135"
     CDS             complement(478..1260)
                     /locus_tag="VK150_02135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30130.1"
                     /translation="MRGALPILLVASAIIGCNSSKTKGSEPVVAAPTQGAAMTAAPAA
                     PGAAEGLTGKVLERLEAAPYCYLRLQTAKGEIWAAVPAAQIEKGTEVTIANPMLMGNF
                     ESKTLNRTFAEVYFGTIAPAGGAAPAAGAGMAAPAGNPHAGMAPAAPIEVGKVEKATG
                     ADARTVAEVWAQKASLKGKTVTIRGKVVKYNAGVMGKNWIHLQDGSGDAKAGTNDITV
                     TSLDPTAKGETITIKGTLRLDKDFGSGYTYAAIVEEAKVQKK"
     gene            complement(1374..>2226)
                     /locus_tag="VK150_02140"
     CDS             complement(1374..>2226)
                     /locus_tag="VK150_02140"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HLP30131.1"
                     /translation="TFARRERGHEIADQIANAFMELRPQYLEAILGNTAQVMGLKPTH
                     PRVDRIARDMVRQHARAWVDFFFYGQRPVEEALAQFASIEGEAHLDAARAEGRGVIIL
                     TAHAGNYELGGMLLRARDLKVHAVYKPDRFEAVERLREDMRALGGVVGIPVDGVGFST
                     LPLVKLLREGALVGMQGDRDFSLNGLPMRFFGREVPFPRGPWELAAMTGAPIVTSFFY
                     TDEDRRFHARFGAPIRVAGERGSRQASMEAGMRAYVSDLEALIRQHPSQWYCFYPFWD
                     DPARAAS"
BASE COUNT          328 a          759 c          794 g          345 t
ORIGIN      
        1 ctgcccaagt accagaccag cgccgacggc atcctgaacc ggcggggctt caccgagcgc
       61 ggcttccgct tcggcgccct ggaggacctg ctgggcaagg tgcagaaggg cgaggtcaag
      121 gcggtggtgg tgctccacga cgctgctttc accagctcga aggaagccga cctgctgggc
      181 cagatcctca aggcggcccc cttcagcctg gcactggagt tcgaggcctc cgacctgggc
      241 cgcgccgcca cggcctggct gcccatcacg agcttcgccg aggagagcga cttcatcgtc
      301 aaccacgacg gggagctgcg ccgctaccag aaggcgatcc agccgcccaa gggcgtccgc
      361 accgtgcccg cctgggtgaa ggacctggcc gccgtccccg tgccggccta ggaacctccc
      421 cccacacgaa gaagcgggcg ccttgggcgc ccgcttcttc gtccaggctc tctggagcta
      481 cttcttctgg accttcgcct cttcgacgat ggccgcgtag gtgtagcccg agccgaaatc
      541 cttgtcgagg cgcagggtgc ccttgatggt gatggtctcg cccttggccg tggggtccag
      601 ggaggtcacg gtgatgtcgt tggtgccggc cttggcgtcg ccgctgccgt cctgcaggtg
      661 gatccagttc ttgcccatga ccccggcgtt gtacttcacg accttgccgc ggatggtgac
      721 ggtcttgccc ttgaggctgg ccttctgggc ccagacttcg gcgacggtgc gcgcgtcggc
      781 gcccgtggcc ttttccacct tgccgacttc gatcggcgcg gcgggggcca tgccggcgtg
      841 ggggttgccc gcgggcgcgg ccatgcccgc cccggccgcc ggagcggcgc cgccggcagg
      901 cgcgatggtg ccgaagtaga cctcggcgaa ggtgcggttc agggtcttgg actcgaagtt
      961 gcccatcagc atggggttcg cgatggtgac ctcggtgccc ttctcgatct gggccgcggg
     1021 gaccgcggcc cagatctcgc ccttggcggt ctggaggcgc aggtagcagt agggggcggc
     1081 ctcgaggcgc tccagcacct tgccggtgag gccctcggcg gcgccgggcg cggccggggc
     1141 ggcggtcatg gcggcgccct gggtcggggc ggcgacaacg ggctcagagc ccttggtctt
     1201 gctggaattg cagccaatga tggccgaagc gacgagcaga atcggaaggg cgccacgcat
     1261 gcgatgaact ccttgtaggg accgggatgg gagccccgga agccagctta gagtcatcat
     1321 cctatgaccg gcgacaaagc atgccacaga aaggcgacgg caagcggagt ggctcaggag
     1381 gcggcgcggg cggggtcgtc ccagaagggg tagaagcagt accactggct ggggtgctgg
     1441 cggatcaagg cctccagatc gctcacatag gcacgcatgc ccgcctccat ggacgcctgg
     1501 cgggagcccc gctccccggc gacccggatg ggcgcgccga accgggcatg gaagcgacga
     1561 tcctcgtccg tgtagaagaa gctggtgacg atgggcgccc ccgtcatggc cgccagctcc
     1621 cagggcccgc gggggaaggg cacctcccgg ccgaagaagc gcatggggag cccgttcagg
     1681 ctgaagtcgc ggtccccttg catgccgacc agcgcgcctt cccgcagcag cttcaccagc
     1741 ggcagggtgg agaagcccac cccgtccacc gggatgccca ccacgccgcc cagggcccgc
     1801 atgtcctccc ggagccgctc caccgcctcg aagcgatcag gcttgtagac ggcatgcacc
     1861 ttcaggtccc gtgcgcggag cagcatccca cccagctcgt agttgcccgc gtgggcggtg
     1921 aggatgatga cgccgcggcc ctccgcccgg gcggcgtcca ggtgcgcctc cccctcgatg
     1981 ctggcgaact gggcgagggc ctcctccacc ggccgctggc cgtagaagaa gaaatccacc
     2041 caggcccggg cgtgctggcg caccatgtcc cgggcgatgc ggtccacccg tggatgggtc
     2101 ggcttcagcc ccatcacctg ggccgtgttg ccgaggatgg cctcgaggta ctggggccgc
     2161 agttccatga aggcgttggc gatctggtcg gcgatctcgt ggccccgctc ccggcgggcg
     2221 aaggtg
//
LOCUS       DATGWW010000145         2641 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_418830, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000145 DATGWW010000000
VERSION     DATGWW010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2641
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418830"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..1253
                     /locus_tag="VK150_02145"
     CDS             90..1253
                     /locus_tag="VK150_02145"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30132.1"
                     /translation="MWVPELPFQLACGRDGSLRDRPLAFLSPDSPRSPTLWFVNRRGR
                     AEGLAPGLPMDQALRAAPGLRVLDPAPQVWWEAQGSLSDFLQHWTPQGQMGRLGEALV
                     ELQGTQAIFGPLADTAERMRQELAERHGWDSHGGLSLSATAAQIAARAEQQLERVADG
                     AEATFLGPQPLRRLPDLAPRIRERFHRLGLRQFADLQPVPLAVLAELTNPKAAPELRA
                     KVRGEDRPRLPLLTERPGHARHGWRLQPPCLPEEVALAARCLDWLWSDARHPRHLVLR
                     WWDADGEPHAWRATAEELTAPPLVLARRIQQAFLAGATRRLLVREVELRLAWGLGRER
                     SLFEDPVHRRLERLEPTLARLRRRFPDRAVLPGWVERGDLKQANNSLIFMEAR"
     gene            1250..1492
                     /locus_tag="VK150_02150"
     CDS             1250..1492
                     /locus_tag="VK150_02150"
                     /inference="COORDINATES: protein motif:HMM:NF025088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4160 domain-containing protein"
                     /protein_id="HLP30133.1"
                     /translation="MTPTLHREGPFRFFFYSHEPREPPHVHVERDDAIAKIWLHDGAI
                     ADAGGLAPRDLQRVVALVMTHRDSFIEAWHEHFGEP"
     gene            1470..1925
                     /locus_tag="VK150_02155"
     CDS             1470..1925
                     /locus_tag="VK150_02155"
                     /inference="COORDINATES: protein motif:HMM:NF021873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2442 domain-containing protein"
                     /protein_id="HLP30134.1"
                     /translation="MSTLANPEPPRATHLWFERGRLVVQLQDGRELACPLAFFPRLAA
                     ASAEDLADWRFTGRGTGIHWPRLDEDLSIEGLLEGRRAPEADVRAKALAPRLRAARRQ
                     AGLTQAQLAERMGRSQALVSLAERGALRIGTPYLRAVLEACGLPGDWQP"
     gene            2031..>2641
                     /locus_tag="VK150_02160"
     CDS             2031..>2641
                     /locus_tag="VK150_02160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30135.1"
                     /translation="MFALGISDFSMGEGVYPAKQLLRVARGLGYRDVVCWDLGMAGYP
                     KLRDTLEWIHKSRELEGLPPDPQWTDFRIHLGCRFTWRGHACGALPFSDAGYAALNRL
                     LTVQAHLERPDLVIPGLGEAEPPRDCVLLADDLAGLDALLREGFYAALLGHPRRAQEA
                     RKALAAGLPVVAPQVLRFRTAEGLEMHRLKRAIHQQSTLIRTEA"
BASE COUNT          353 a          997 c          902 g          389 t
ORIGIN      
        1 tccctcctcg gagcggggaa cgattctgga ttgtttttcg ttaaaatttc gccatacttg
       61 gatccctcct ggaggtcccg gtgctggcga tgtgggttcc cgaactgccg ttccagctgg
      121 cctgcgggcg ggacgggagc ctgcgggacc gccccctggc cttcctgagc cccgacagcc
      181 cccgctcgcc caccctctgg ttcgtgaacc gtcggggccg ggccgagggg ctggccccgg
      241 ggctgcccat ggatcaggcc ctgcgggccg cgccgggcct gcgggtgctg gatccggccc
      301 cccaggtgtg gtgggaggcc cagggcagcc tcagcgactt cctccagcac tggacgcccc
      361 aggggcagat gggccgcctg ggcgaggccc tggtggagct gcagggcacg caggcgatct
      421 tcgggcccct ggccgacacc gccgagcgca tgcgccagga gctggccgag cggcacggct
      481 gggacagcca cggcggcctc tccctgagcg ccaccgcggc ccagatcgcc gcccgcgccg
      541 agcagcagct ggagcgggtg gccgacggcg ccgaggccac ctttctcggg ccccagcccc
      601 tccgccgctt gccggacctg gcgccccgca tccgggagcg cttccatcgc ctgggcctgc
      661 ggcagttcgc cgacctccag cccgtgcccc tggcggtgct ggcggaactg acgaacccca
      721 aggccgcgcc tgagttgcgg gccaaggtca ggggcgagga tcggccccgg ctgcccctgc
      781 tcacggagcg ccccggccac gcccgccacg gctggcggct tcagcccccc tgcctgcctg
      841 aagaagtagc cctggccgcc cgctgcctgg attggctctg gtccgatgcc cgccaccccc
      901 gccacctggt gctgcgctgg tgggatgcgg atggcgaacc ccacgcctgg cgcgccaccg
      961 ccgaggaact gacggccccg cccctggtcc tggcccggcg catccagcag gccttcctgg
     1021 ccggagccac ccggcggctc ctcgtgcgcg aggtggaact gcgcctggcc tggggcctgg
     1081 gccgcgagcg gagcctcttc gaggatccgg tgcaccggcg cctcgaacgc ctcgaaccca
     1141 ccctcgcccg cctccggcgt cgcttcccgg accgtgccgt gttgccgggg tgggtggaac
     1201 gaggggactt gaaacaagcc aataatagcc tcatattcat ggaggcccga tgacccccac
     1261 cctccatcgg gaagggcctt tccggttctt tttctacagc catgaacccc gcgagccgcc
     1321 ccatgtccac gtcgaacggg atgacgccat tgccaagatc tggctgcatg acggcgccat
     1381 cgcggacgcc ggaggcctcg cgccccggga tctccagcgg gtggtggccc tcgtgatgac
     1441 ccatcgagac agcttcatcg aggcctggca tgagcacttt ggcgaaccct gagcctcccc
     1501 gcgccacgca cctctggttc gagcgggggc ggttggtcgt ccagctccag gacggccggg
     1561 aactggcctg cccgctggcc ttctttccgc ggctagcggc ggcttccgcc gaggatctgg
     1621 cggactggcg gttcacaggc cgcggcaccg gcatccactg gccccgcctg gatgaggatc
     1681 tttccatcga gggactgctg gaggggcgcc gcgcccccga ggcggatgtc cgggcgaagg
     1741 ccctggcccc gcgcctgcgt gccgcccgcc gccaggccgg cctcacccag gcgcagctgg
     1801 ccgagcggat gggccgctcc caggccctgg taagccttgc cgagcggggc gccctgcgca
     1861 tcggaacccc ctacctccgc gccgtccttg aagcctgcgg cctgcccggc gactggcagc
     1921 cctgaccgga cctggcggac agccgaatcg aagcacaagc atcgccacgc aaacgggaag
     1981 accccccatc ttcgcgatga gggcacgaat cctcaaggag cagccccccc atgttcgccc
     2041 tcggcatttc cgatttcagc atgggcgaag gcgtctaccc ggcgaagcag ctgctgcggg
     2101 tggcccgggg cctgggctac cgcgacgtgg tctgctggga tctcgggatg gcggggtacc
     2161 cgaagctgcg cgacacgctg gagtggatcc acaagtcccg cgaactcgaa ggcctgccgc
     2221 cggaccccca gtggacggac ttccgcatcc acctgggttg ccgcttcacc tggcggggcc
     2281 acgcctgcgg cgcgctgccc ttcagcgatg cgggctatgc cgccttgaac cggctgctca
     2341 ccgttcaggc ccacctggag cggcctgacc tcgtgatccc cggccttggt gaagccgagc
     2401 cgccgcggga ctgcgtgctg ctggccgacg acctcgcggg cctggacgcg ctgctgagag
     2461 agggcttcta cgcggcgctc ctgggccatc cgcgccgggc ccaggaggcc cgcaaggctc
     2521 tggcggcggg cctgccggtg gtggcgcccc aggtgctgcg cttccgcacc gccgagggcc
     2581 tggagatgca ccgcctcaag cgggccatcc atcagcaatc cacactcatc cgcaccgagg
     2641 c
//
LOCUS       DATGWW010000146         4557 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_238250, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000146 DATGWW010000000
VERSION     DATGWW010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4557
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238250"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..1630)
                     /locus_tag="VK150_02165"
     CDS             complement(20..1630)
                     /locus_tag="VK150_02165"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF006006.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HLP30136.1"
                     /translation="MSADQPSITLDRRAFLGAGLALGSAALAGAEGKPRPVSKGLVLE
                     EATVEGLQAGMAAGHWTAVDLTRRYLARIAAFDQAGPKLNAVIELNPEALAQAKALDA
                     ERKAGKVRGPLHGIPVLIKDNIDTADRMKTTAGSLALAGAPAPKEDAFVVRRLREAGA
                     VILGKTNLSEWANFRSTRSSSGWSGRGGQTRNPYALDRSPSGSSSGSGAAAAASFCSV
                     AVGTETDGSIVSPANANGLVGLKPTVGLVSRGGIIPISHTQDTAGPMTRTVRDAAILL
                     NALAGSDPRDSATREADARRDADYTRHLGPDGLKGARLGLVKNLLGVHAHVDAVVRPA
                     LELLKAGGATLVEVELKSGAYDDAEFEVLLYEFKAGLNAYFAGRGGSVRDLADLMAFN
                     ESRRGEEMPFFGQELLVQAQAKGPLSDPAYRKALETCAQARHDITGLLAQHQLQALVA
                     PTGGPAWLIDHLNGDSSSLSFSSPAAVAGCPHITVPAGFASGLPVGLSFVGGPWQEAL
                     LLKLAHGFEQASRARRPPRFAGTAAVPR"
     gene            1776..1964
                     /locus_tag="VK150_02170"
     CDS             1776..1964
                     /locus_tag="VK150_02170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30137.1"
                     /translation="MATFLLWLILLIFCWPLAILALILYPLVWLVLLPFRLLGFAVEG
                     VFGLVKGLFLLPGRILSR"
     gene            2036..3454
                     /gene="glnA"
                     /locus_tag="VK150_02175"
     CDS             2036..3454
                     /gene="glnA"
                     /locus_tag="VK150_02175"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HLP30138.1"
                     /translation="MFNGFEQARQFIQENHVRMIDLIFSDLWGRWHHVSIPASQFTES
                     LMRDGVGFDGSSVGLKSVKSGDMVLIPDLATGYMDPFWEMPTLAFICSAYEADTKAPF
                     PVDPRNIAIRAEAYLRETDIADQSIWGPEYEFYVFDKVSYENGVNTASYRVDSREADW
                     HSGEGGHGHFIPLHGGYHAMAPKDQLYNLRAEMCAEMERMGVDVKYHHHEVGGPGQCE
                     IETPLFPLLKAGDATQLVKYVVKMVAHRRGQTATFMPKPLYGEAGSGMHFHQMLMKGG
                     KNLFYDEQGYGRMSQEALWYIGGILAHGPALLALTNPSTNSYRRLVPGFEAPVSAFFS
                     LGNRSAAIRVPKYADQPETARFEFRPPDATCNVYLALAAQLLAGIDGIQKRMDPTALG
                     FGPIDQNIFGWSEDQRKQIKSLPTSLTEACDALEGDMDFLLAGGTFDRLQLEDYLRHL
                     RAQEAAVRNRPHPYEMALYFEA"
     gene            3549..3737
                     /locus_tag="VK150_02180"
     CDS             3549..3737
                     /locus_tag="VK150_02180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30139.1"
                     /translation="MDLYLEARESELLMRLLEYRLGELRREIHHTDRRAFKEGLKADE
                     AVIERILAKLKTPAAMGM"
     gene            complement(3743..4204)
                     /locus_tag="VK150_02185"
     CDS             complement(3743..4204)
                     /locus_tag="VK150_02185"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HLP30140.1"
                     /translation="MLTRSSKSPQPPLLFLGCLALGWALGKRWPLGLGLPDLPRWAAG
                     SGLMAVAGVLGAWGLLTFRRMGTTPEPNGVASSLLTSGPFRFTRNPLYLALSATLAAF
                     GLLLDSAWVLLLAALLALLLDRFVIQREEARLRTQFGDTYHAYARRVRRWL"
     gene            complement(4223..>4557)
                     /locus_tag="VK150_02190"
     CDS             complement(4223..>4557)
                     /locus_tag="VK150_02190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30141.1"
                     /translation="EGGLLVAALESAFGGAEAGVGGCQLLLTKGALRLDSLLFGESTG
                     RIVVSVSAEGEGSLATLCATHRVPFAKIGTTGGSRITLAVDGQPLLDAEAAELKGLHA
                     DALEAALG"
BASE COUNT          720 a         1593 c         1562 g          682 t
ORIGIN      
        1 agtgggatca cccaccctgt caacggggga ccgcggccgt cccggcgaaa cgcggcgggc
       61 gccgggcccg gctggcctgc tcaaaaccgt gggccagttt gagcaggagc gcctcctgcc
      121 aggggccgcc cacgaaggag aggcccacgg gcaggccgga ggcgaagccc gccggcaccg
      181 tgatgtgggg acagcccgcc accgccgcgg ggctggagaa actgagggag gaactgtccc
      241 cgttgagatg gtcgatgagc caggcggggc cgccggtggg ggcgaccagg gcctggagct
      301 ggtgctgcgc cagcaggcca gtgatgtcgt gtcgggcctg ggcacaggtc tccagcgcct
      361 tccggtaggc cgggtcgctg agcggcccct tggcctgggc ctgcacgaga agttcctgcc
      421 cgaagaaggg catctcctcg ccgcgacggg attcgttgaa ggccatgagg tccgccaggt
      481 ccctcaccga tccgccccgg cccgcgaagt aggcgttcag gccagccttg aactcgtaga
      541 gcagcacctc gaattctgcg tcgtcatagg cgcccgattt cagctccacc tccaccaggg
      601 tggcgcctcc cgccttgagg agttcgaggg cgggccggac gaccgcgtcc acatgggcat
      661 gcacacccag caggttcttc acgaggccca ggcgggcccc cttcaaccca tccgggccga
      721 ggtggcgcgt gtagtcggcg tcgcggcgcg cgtccgcctc acgggtggcc gaatcccggg
      781 gatcgctgcc cgccagggcg ttcaacagga tcgccgcgtc ccgcacggtg cgggtcatgg
      841 ggcccgccgt gtcctgggtg tgcgagatgg ggatgatgcc gccgcggctc accaggccca
      901 ccgtgggttt caggcccacc aggccattgg cgttggcggg gctcacgatg gagccgtcgg
      961 tctcggtgcc cacggccacc gagcagaaac tcgccgccgc cgccgcgccg gaaccggagc
     1021 tggatccgct ggggctgcgg tccagcgcgt aggggttcct cgtctggccg ccccgcccac
     1081 tccagccgct gctgctgcgg gtcgagcgga agttcgccca ctcgctgagg ttcgtcttcc
     1141 ccaggatcac cgcccccgcc tcgcggagcc gcctcaccac gaaggcgtcc tccttcggcg
     1201 ccggcgcccc ggccagggcc agggatcccg cggtggtctt catgcggtca gcggtgtcga
     1261 tgttgtcctt gatgagcaca gggatgccgt gcagcggccc ccgcaccttt ccggccttcc
     1321 gctcggcgtc cagggccttc gcctgggcca gggcctccgg gttcagctcg atcaccgcgt
     1381 tcagcttcgg tcccgcctga tcgaaggccg cgatgcgcgc caggtagcgc cgggtcaggt
     1441 ccacggcggt ccaatggccc gccgccatgc ccgcctggag gccctccacg gtggcctcct
     1501 ccagcaccag tcccttggag acgggccgcg gcttcccctc ggcccccgcg agggccgcgg
     1561 agccgagggc caggcccgcg cccaggaaag cgcggcggtc aagggtgatg gacggttgat
     1621 cagcggacat ggactggcct cgtggggatg tggtgggatc ataccccgct tggcaccgtt
     1681 ggcttccggc ccggccaccg gtgcccgccg ggcgttcgcc gatccgatgc ggatgacgag
     1741 cccgtgcgtg ccgatcctgg aacggggagg cttccatggc cacgttcctg ctctggctca
     1801 tcctgctgat cttctgctgg cccttggcca tcctggcgct gatcctctac ccgctggtct
     1861 ggctggtcct cctgcccttc cgcctgttgg ggttcgcggt ggagggcgtg ttcgggctgg
     1921 tgaaggggtt gttcctgctg ccggggcgca tcctgagccg gtgaaggagg gttgagccag
     1981 atcacaacct ttgtagatct atggatctag aatgaccggg tcccgtggag gccccgtgtt
     2041 caatggattc gagcaggccc ggcagttcat ccaggaaaac catgtccgga tgatcgacct
     2101 gatcttcagc gacctctggg gccgctggca ccacgtgagc atccccgcct cgcagttcac
     2161 ggaatcgctc atgcgcgacg gcgtgggctt cgacggttcc agcgtgggcc tgaagtccgt
     2221 gaagtccggc gacatggtgc tcatccccga cctggccacg ggctacatgg accccttctg
     2281 ggagatgccc accctcgcct tcatctgctc agcctacgag gccgacacca aggcaccctt
     2341 cccggtggat ccccgcaaca tcgccatccg cgccgaagcc tacctccgcg agacggacat
     2401 cgccgaccag agcatctggg gcccggagta cgagttctac gtcttcgaca aggtcagcta
     2461 cgagaacggc gtgaacacgg cctcctaccg cgtggacagc cgcgaggcgg actggcacag
     2521 cggcgagggc ggccatggcc acttcatccc gctgcacggc ggctaccacg ccatggcgcc
     2581 caaggaccag ctctacaacc tgcgagccga gatgtgcgcc gagatggagc gcatgggggt
     2641 ggacgtgaaa taccaccacc acgaggtggg cggcccgggc cagtgcgaga tcgagacgcc
     2701 gctcttcccc ctgctgaagg ccggcgatgc cacgcagctc gtgaagtacg tggtgaagat
     2761 ggtcgcccac cgccggggcc agaccgccac cttcatgccc aagcccctct acggcgaggc
     2821 gggcagcggc atgcacttcc atcagatgct catgaagggc gggaagaacc tcttctacga
     2881 cgagcagggc tacggtcgca tgagccagga ggccctctgg tacatcggcg gcatcctggc
     2941 ccatggcccc gccctgctgg ccctcaccaa ccccagcacc aacagctacc gccgcctggt
     3001 gccgggcttc gaggccccgg tgagcgcctt cttctcgctg ggcaaccgct ccgccgccat
     3061 ccgcgtgccg aaatacgccg accagcccga gaccgcccgc ttcgagttcc gtccgcccga
     3121 cgccacctgc aatgtctacc tggccttggc cgcgcagctg ctggcgggca tcgacggcat
     3181 ccagaagcgg atggatccca cagccctggg tttcggtccc atcgaccaga acatcttcgg
     3241 gtggtccgaa gaccagcgga agcagatcaa gagcctgccc accagcctca ccgaagcctg
     3301 cgacgcactg gaaggggaca tggacttcct gctggccggc gggaccttcg accgcctgca
     3361 gctggaggac tacctgcgcc acctgcgcgc ccaggaggcc gccgtgcgca accggccgca
     3421 cccctatgag atggcgctgt atttcgaagc ctagggccgc atcagtggcg gagcctgccc
     3481 ggagggccga tattacccat gggccccggg atcaatccct tggtctggcg gcccccgggg
     3541 aggccgccat ggatctctat ctcgaagcca gggaatcgga gctgctgatg aggctcctcg
     3601 agtacaggct cggtgaactc cgccgagaga ttcaccacac ggaccgccgt gccttcaagg
     3661 agggcctcaa ggcggatgag gcggtgatcg agcgcatcct cgcgaagctg aagacgccgg
     3721 ccgccatggg gatgtgaggt ccctagagcc agcgtcggac gcgccgggcg taggcgtggt
     3781 aggtgtcgcc gaactgggtc cgcaggcgcg cctcttcccg ctggatgacg aatcggtcga
     3841 gcagcagcgc caggagcgcc gccagcagca gcacccaggc tgaatcgagg agcagtccaa
     3901 aggcggcgag ggtggccgaa agggccaggt agaggggatt ccgcgtgaac cggaagggcc
     3961 ccgaggtgag caggctggag gccacgccgt tgggctccgg cgtggtgccc atgcgccgga
     4021 aggtgagcag gccccaggcg ccgaggacgc cggccaccgc catcagcccg gagcccgcag
     4081 cccagcgcgg aaggtccggc aacccgagcc cgaggggcca cctcttcccc agggcccagc
     4141 ccagcgcgag gcagcccagg aacagcaggg gcggctgggg agacttggat gatcgggtca
     4201 gcaaggcctc ccctcttcgg aatcagccca gggccgcttc cagcgcatcg gcgtgcaggc
     4261 ccttcagctc cgccgcctcg gcgtcgagga ggggttggcc gtccaccgcg agggtgatgc
     4321 gggaaccgcc cgtggtgccg atcttggcga agggtacgcg gtgggtggcg cagagggtgg
     4381 ccaggctacc ctcgccttcg gcgctcacgg agaccacgat gcggcccgtg gattcgccga
     4441 agagcaggct gtccaggcgc agcgcgccct tcgtcagcag gagctggcag ccgccaacgc
     4501 cagcttcggc gcccccgaag gcgctctcca gagccgccac caggagccca ccctcgc
//
LOCUS       DATGWW010000147         1671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_57965, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000147 DATGWW010000000
VERSION     DATGWW010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57965"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..1242)
                     /locus_tag="VK150_02195"
     CDS             complement(88..1242)
                     /locus_tag="VK150_02195"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016846 - carbon-sulfur lyase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019343 - cysteine biosynthetic process via
                     cystathionine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HLP30142.1"
                     /translation="MTQEARFDTLCIHAGQAPDPTNGAIMTPVYFTSTYIQEGLGINK
                     GFDYARVRNPTRDALEGNLAALEGGKHGMAFGSGMAAVQAIFEQLSSGDHVVLGDNVY
                     GGTFRLLDKVMTRFGLTYTQVDTGDLAAFKAALRPNTKLVMLETPTNPMLGITDIPGV
                     RRVMTEAACTAVLAVDNTFATPYNQRPLDMGADLVFHSTTKYLNGHSDSIGGIAITNR
                     EDLAEGLRFHQKAAGGILSPMESWLILRGTKTLHLRMERHNASALQIARWLEARKDLK
                     AVYYPGLESHPQHALAKQQMKGFSGIVSFDTGDAERTRRMASSFKVFSLAESLGGVES
                     LVCHPASMTHGSVPEADRQRLGINDNLLRLSVGVEDVQDLIEDLERVLKV"
     gene            1286..>1671
                     /locus_tag="VK150_02200"
     CDS             1286..>1671
                     /locus_tag="VK150_02200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30143.1"
                     /translation="MRESLRSALVLPALLGGLLACRTDKPEDQVKRAFEACRAAVEAG
                     DAAGATAPLDPSFRGPDGMDKPTARLFLMGTFRQEKVGVTVLRSVVTVRGNDANQEVD
                     LVLTGRSGGLLPQDASQRSFQLRWRK"
BASE COUNT          253 a          533 c          593 g          292 t
ORIGIN      
        1 accgggcgca cgggctggga tagcgcttcc gcgaaaagca ccaccaaccg cagggaacca
       61 accctccgtg ggagtcggcg cgacggttta gaccttcagc acccgctcca gatcctcgat
      121 caggtcctgc acgtcctcga cacccacgct gaggcgcagc aggttgtcat tgatgcccag
      181 acgctggcgg tcggcttcgg gcacgctgcc gtgggtcatg ctggccgggt ggcagaccag
      241 gctctccacg ccgccgaggc tttccgccag cgagaagacc ttgaacgaag atgccatgcg
      301 ccgcgtgcgc tccgcgtcgc cggtgtcgaa gctgacgatg ccggaaaacc ccttcatctg
      361 ctgcttggcc agggcgtgct gggggtggga ttccaggccg gggtagtaga cggccttcag
      421 gtccttgcgg gcttcgagcc accgggcgat ctgcagggca ctggcgttgt ggcgctccat
      481 gcgcaggtgc agggtcttgg tgccccggag gatcagccag gattccatgg gcgagaggat
      541 gccgccggca gccttctggt ggaaccgcag gccctcggcg aggtcttcgc ggttggtgat
      601 ggcgatgccg ccgatggagt cgctgtggcc gttgagatac ttggtggtgg agtggaagac
      661 cagatccgca cccatgtcga ggggtcgctg gttgtagggg gtggcgaagg tgttgtccac
      721 cgccagcacc gccgtgcagg cggcctcggt catcacgcgc cgcacgccgg ggatgtcggt
      781 gatcccgagc atcgggttgg taggcgtctc cagcatcacc agcttggtgt tgggccgcag
      841 cgccgccttg aaggccgcga ggtcgcccgt gtccacctgg gtgtaggtga gaccgaagcg
      901 ggtcatcacc ttgtccagca ggcggaaggt gccgccgtac acgttgtccc ccagcaccac
      961 gtggtcgccg ctggacagct gctcgaagat ggcctgcacc gccgccatgc ccgagccgaa
     1021 ggccatgccg tgcttcccgc cttccagggc cgcgaggttg ccctccaggg cgtcgcgggt
     1081 ggggttgcgc acgcgggcgt agtcgaagcc cttgttgatg cccagccctt cctggatgta
     1141 ggtgctggtg aagtagaccg gcgtcatgat ggcgccattg gtgggatccg gcgcctggcc
     1201 agcgtggatg caaagggtgt cgaaacgggc ttcctgggtc atggcgctat ccttctcggg
     1261 ttcctaagca tgaagggatg tcgccatgag ggaaagcctc cgctccgccc tggtcctgcc
     1321 ggccctcctg ggaggcctcc tcgcttgccg aactgacaag ccggaagacc aggtgaagcg
     1381 ggctttcgag gcctgccgcg ccgccgtgga ggcgggcgac gcagctgggg ccaccgcgcc
     1441 cctggatccg tcttttcgag gccccgatgg catggacaag ccgacggccc gcctcttcct
     1501 catgggcacc ttccgccagg agaaggtcgg cgtgaccgtg ctccgcagtg tggtgacggt
     1561 gcgtgggaac gatgccaacc aggaggtgga cctggtcctc accgggcgca gcggcggcct
     1621 gctgccccag gacgcctcgc agcgctcctt ccagctgcgc tggcgcaaaa g
//
LOCUS       DATGWW010000148         2511 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_238649, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000148 DATGWW010000000
VERSION     DATGWW010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238649"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1534)
                     /gene="glyS"
                     /locus_tag="VK150_02205"
     CDS             complement(<1..1534)
                     /gene="glyS"
                     /locus_tag="VK150_02205"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR00211.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HLP30144.1"
                     /translation="MSGTKTFLLELHCEEIPARFLKPLTDELAGKLEDALESWIPTGD
                     SANYGIKVQGFYSPRKIALRLADIPVSQPDQTETQVGPPQRMCVDEAGKPTIQGLKFA
                     EKWGVDFGAVRFEQPAGKKEPCAVVTITRKGRPTVDLLAETLPGLIAGLHVPKAMRWG
                     KSDFEFVRPIRNILCLFGEQVVPITVDGVTATNTTWGHRLYHRQHPEPVRISTPEAYE
                     AALEAAGVVVSVDVRRARIAAQLEDLAAAVKGRLVADAELLDTLAEIVEFPTIVRGEF
                     PASFLELPKEVLVTSLREHQKSFCIEDAEGALLPFFLTAANRTDDPSGFVKAGNEWVL
                     KARLYDARFFFAEDRKHPLSDRLEKLQALTFQRDLGSYHAKTGRVVALVKALATRLSN
                     DDEHIDRALEAARMAKCDLRTLMVGEFPELQGIMGGEYLKHEGAHEDVWMAVKEHYRP
                     VGADDAIPSTPMGCLLSLCDKLDTVAGCFAVGLIPSGSKDPLALRRAGQGIVRILWER
                     GWA"
     gene            complement(1531..2457)
                     /locus_tag="VK150_02210"
     CDS             complement(1531..2457)
                     /locus_tag="VK150_02210"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR00388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HLP30145.1"
                     /translation="MHIQELILRLQRFWADRGCLIGQPYDLEKGAGTMNPLTFFGALG
                     AKPWNVAYVEPSRRPADGRYGENPFRVYKHLQFQVILKPSPAKVQDLYIESLEALGID
                     LSKHDLRFEEDNWESPTLGAWGVGWQVVLDGMEISQFTYFQQVGGLDCRPVSAELTYG
                     IERICMFLGGYDNIFDLVHGEVKTDDGVFPVTYGQMRQREEFELSSYSFEHADLDLHR
                     TLFDAFEKEGWRLLKDHGHFLSAYEQALKMSHTFNVLDARGAVSTTERPGIIKRVRDL
                     ACGCAKASLEFETAKLETADVADAKAGKGGAK"
BASE COUNT          409 a          809 c          836 g          457 t
ORIGIN      
        1 gggcccagcc gcgctcccag aggatgcgca cgatgccctg tcctgcccgg cgcagggcca
       61 ggggatcctt cgagccactg gggatcaggc ccacggcgaa gcagccggcc acggtgtcga
      121 gcttgtcgca aagggacagc aggcacccca tgggcgtgga cgggatggca tcatcggccc
      181 cgacggggcg gtagtgctcc ttcacggcca tccacacatc ttcgtgggca ccctcgtgct
      241 tcaggtactc gccgcccatg atgccctgca gctcggggaa ttcgcccacc atgagcgtgc
      301 gcaggtcgca cttggccatg cgggccgctt ccagggcgcg gtcgatgtgc tcgtcgtcgt
      361 tcgatagccg cgtggccagg gccttcacca gggccacgac gcggccggtc ttggcgtggt
      421 agctgccgag gtcgcgctgg aaggtgaggg cctgcagctt ctccaggcgg tccgacaggg
      481 ggtgcttgcg gtcttccgcg aagaagaagc gggcgtcgta gagccgcgcc ttcagcaccc
      541 actcgttgcc cgccttcacg aagccagacg gatcgtccgt gcggttggca gcggtgagga
      601 agaagggcag cagggcgccc tccgcatcct cgatgcagaa gctcttctgg tgctcgcgca
      661 gcgaggtgac cagcacttct ttcggcagct ccaggaagct ggccggaaat tcgccgcgga
      721 cgatcgtggg gaattccacg atctccgcca gggtgtccag cagctccgca tcggccacca
      781 ggcgaccctt cacggcggcg gcgaggtctt ccagctgggc ggcgatccgc gcgcggcgaa
      841 catcgacgct caccaccacc cccgcggcct ccagggcggc ctcgtaggct tccggggtgc
      901 tgatcctcac cggttccggg tgctggcggt ggtagaggcg gtggccccag gtggtgttgg
      961 tggcggtgac gccatccacc gtgatgggca ccacctgttc gccgaagagg cacaggatgt
     1021 tgcggatggg gcgcacaaac tcgaagtccg acttgcccca gcgcatggcc ttcggcacgt
     1081 gcaacccggc gatgagcccc ggcagggtct ccgccagcag atccaccgtc ggccggccct
     1141 tgcgggtgat cgtgaccacc gcgcagggtt ccttcttgcc cgcaggttgc tcaaaccgca
     1201 cggccccaaa atccacgccc cacttctcgg cgaacttcag accctggatc gtgggcttgc
     1261 ccgcctcatc tacgcacatg cgctggggag ggcccacctg ggtttcggtc tggtcaggtt
     1321 gagagacggg tatgtccgcc aaacggagtg caattttgcg cggtgagtag aacccctgaa
     1381 ccttgattcc gtagttggct gaatctccag ttggaatcca ggattcgagc gcgtcttcaa
     1441 gcttgccggc cagttcatcc gtaagcggct tcaggaaccg cgccggaatc tcctcacagt
     1501 gcagctccag caggaaagtc ttggtgccgc tcacttcgca ccccccttcc cggccttcgc
     1561 atctgcgaca tctgcggttt caagctttgc ggtttcaaat tccagagaag ccttcgcaca
     1621 tccacacgcc aggtcccgca cccgcttgat gatgccgggc cgctcggtgg tgctcacggc
     1681 gccgcgggcg tccagcacgt tgaaggtgtg gctcatcttg agggcctgtt cgtaggcgct
     1741 gaggaagtgg ccgtggtcct tgagcaggcg ccagccctcc ttctcgaagg cgtcgaagag
     1801 cgtgcggtgc aggtccaggt ctgcgtgctc gaagctgtag gagctcagct cgaactcctc
     1861 gcgctggcgc atctggccgt aggtgacggg gaagacgccg tcgtcggtct tcacctcacc
     1921 gtgcaccagg tcgaagatgt tgtcgtagcc gcccaggaac atgcagatgc gctcgatgcc
     1981 gtaggtcagc tcggcgctca cgggtcggca gtccaggccg cccacctgct ggaagtaggt
     2041 gaactggctg atctccatgc cgtcgaggac cacctgccaa cccacgcccc aggcgcccag
     2101 ggtgggcgat tcccagttgt cctcctcgaa gcggaggtcg tgcttggaga ggtcgatgcc
     2161 cagggcctcg aggctctcga tgtagaggtc ctgcaccttg gcggggctgg gcttcaggat
     2221 cacctggaac tggaggtgct tgtagacgcg gaagggattc tcgccgtagc ggccgtccgc
     2281 cgggcggcgg gaaggctcca cataggccac attccagggt ttggcgccca gcgcgccaaa
     2341 gaaggtgagc gggttcatgg tgccggcgcc cttttccagg tcgtagggct ggccgatgag
     2401 acagccccgg tcggcccaga accgctgcag gcggaggatc agttcctgga tgtgcatgag
     2461 ggctcgccaa aacgagcatt gtagcgggtt ttcaccactt tggtaagctc a
//
LOCUS       DATGWW010000149         2781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_187166, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000149 DATGWW010000000
VERSION     DATGWW010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2781
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187166"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..912)
                     /locus_tag="VK150_02215"
     CDS             complement(<1..912)
                     /locus_tag="VK150_02215"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HLP30146.1"
                     /translation="MSDAAAQQISSGNLPTPNWHATHEEAQARLTRMAEALGAADWQE
                     VDKGAKWIYEVLRPHNEAEERELFPLLEEIGAEALHQRLFEDHRQMWDLTLQLLAEIA
                     DGQVRAPRSLTLLGQRLVDLIRDHIEAEEHLMLPLLKGRSLYCSDAETQDGYLILEKK
                     LIAPETWSFIVQAPQVARGRKPGQFFMVAPFPESERIPLTLAGGDARRGYIHFIMQEV
                     GATTKAMGRFSAGDRLFAVAGPMGTPTELVEEGTIVLMAGGYGSAAILPAAEELHAKG
                     RRVITILGGRSAERVLLADELGAASAEL"
     gene            complement(1054..>2781)
                     /locus_tag="VK150_02220"
     CDS             complement(1054..>2781)
                     /locus_tag="VK150_02220"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30147.1"
                     /translation="VGGRGWQLRYAIKPDFYHAEGRNQPLFLLLGGIAVSCSLAAVVW
                     SLAGTRQRALELAQAMNASLHEALERNHSHLTHSPLAVLETDAAFRLQEWNPAAERIF
                     GYSRAEALGKDPRMLFPQEAQAEVDARRAELLEGNGGTRRTLENITSTGEGILCDWYS
                     TALRDERGRFLGAIFLVDDITERRRAESALRQAQKLESLGVLAGGIAHDFNNLLTAIL
                     GNAEVALDRVQGDPALKAALQRIEATTQRGSDLARQLLAYAGKAHFAVRPLDLNAIIL
                     EMGDLLSVSISKKVALRTDLEPGLPPVDADSAQFQQVVMNLVINASEAIGDQTGSVTL
                     RTRSLHYGKAELSAAFPGQVLEPGPYVRMEVEDDGCGMDAETIGRIFDPFFTTKFTGR
                     GLGLSAMLGIVRGHRAGIRVESTPGVGTTFILLFPASESTVTLPVPEPDPTTAIAGTV
                     LVVDDESIIRDLAHSALEATGLRVLEARDGLEAVELFEAGQERVDLVLLDMTMPRMGG
                     AEAFRHIRELAPGTKVLLTSGYTQRESLESLADLPPDGFLQKPFRVRELVSKVRDLLR
                     QSPGKTSIR"
BASE COUNT          410 a          902 c         1014 g          455 t
ORIGIN      
        1 cagttccgcg gaggcggcgc ccagctcgtc ggccagcagc acccgttccg cactgcggcc
       61 gcccaggatg gtgatgaccc ggcggccctt ggcgtgaagc tcctccgcgg cgggcaggat
      121 ggcggcgctg ccgtagccgc cggccatcag cacgatggtg ccctcctcca ccagctcggt
      181 gggggtgccc atggggccgg ccaccgcgaa gaggcggtcg ccggcgctga agcggcccat
      241 ggccttcgtg gtggcgccga cctcctgcat gatgaagtgg atgtagccgc ggcgggcgtc
      301 gccgccggcc agggtgaggg gaatgcgctc gctctcgggg aagggggcca ccatgaagaa
      361 ctgccccggc ttccggccgc gggccacctg gggcgcctgc acgatgaagg accaggtctc
      421 gggggcgatg agcttcttct cgaggatcag gtacccgtcc tgggtttccg catcggagca
      481 gtagagcgag cgccccttga ggaggggcag catgaggtgc tcttcggctt cgatgtgatc
      541 gcggatcagg tccaccaggc gctggcccag cagcgtgagg gagcgcggcg cgcgcacctg
      601 gccgtcggcg atctcggcga gcagctgcag ggtgaggtcc cacatctgtc ggtggtcctc
      661 gaacaggcgc tggtggaggg cctctgcgcc gatctcctcg agcaggggga acagctcgcg
      721 ctcctccgcc tcgttatggg gacgcagcac ttcgtagatc cacttggcgc ctttgtccac
      781 ctcctgccag tcggcggcgc ccagggcctc cgccattcgg gtcaggcggg cctgggcctc
      841 ctcgtgggtg gcatgccagt tgggagtggg caggttaccg gagctgatct gctgtgcggc
      901 cgcgtcggac atggatgcct ccagatccgt tcagcatgag atgtacaggt cgggatttct
      961 gtgtctaaaa acccaatcgg aaccacttgt gacccacgcc acaggagcca gtcatcgcaa
     1021 ggacttaggc gatttagcgc catgcctgga tggttatctg atgctggttt tccccggaga
     1081 ctggcgaagg agatcccgca ccttgctgac cagctccctg acccggaagg gtttctggag
     1141 gaagccgtcc ggcgggaggt ccgcgaggga ttccagggat tcccgctggg tgtagccgct
     1201 ggtgagcagc accttggtgc ccggggccag ctcacggatg tgccggaagg cctccgcgcc
     1261 gcccatgcgg ggcatggtca tgtcgagcag caccaggtcc acccgttcct gtcccgcctc
     1321 gaacagctcg acggcctcaa ggccgtcccg ggcctccaga acccgcaggc ctgtggcttc
     1381 cagggcgctg tgggccaggt cccggatgat gctctcgtcg tccacgacca gtaccgtgcc
     1441 cgcgatggcc gtggtgggat cgggctcggg aaccggcagg gtcacggtgg attccgaggc
     1501 ggggaagagc aggatgaagg tggtgcccac gcccggcgtg ctctcgacac ggatgccggc
     1561 ccggtggccc cgcacgatgc cgagcatggc ggacaggccc aggccccggc cggtgaactt
     1621 ggtcgtgaag aagggatcga agatgcggcc gatggtctcg gcgtccatgc cgcagccgtc
     1681 gtcttccact tccatccgga cgtaggggcc gggctccagc acctggccgg ggaaggccgc
     1741 ggagagctcg gccttgccgt agtgcaggct ccgggtgcgg agcgtcacag agccggtctg
     1801 gtcgccgatc gcctccgagg cgttgatcac caggttcatg accacctgct ggaactgcgc
     1861 gctgtcagcg tccaccggcg gaaggccggg ctcgaggtcg gtgcgcaggg ccaccttctt
     1921 ggagatggag actgaaagca ggtcgcccat ttcgaggatg atggcgttga ggtcgagggg
     1981 ccgcaccgcg aagtgggcct tgcccgcgta cgcgagcagc tgacgggcga ggtccgaacc
     2041 gcgctgcgtg gtggcttcga tgcgctgcag ggcggccttc agcgcgggat ccccctggac
     2101 ccggtccagg gccacctccg cgttgccgag gatcgccgtg agcagattgt tgaaatcgtg
     2161 cgcgatgcca ccggccagca cgcccaggct ctccagcttc tgggcctgcc gcagggcgct
     2221 ctcggcgcgg cgtcgctcgg tgatgtcgtc gaccaggaag atcgccccga ggaaccggcc
     2281 gcgctcgtcg cgcagggcgg tgctgtacca gtcgcagagg atgccctcgc ccgtgctggt
     2341 gatgttctcc agggtgcgcc gggtgccgcc attgccctca agaagctctg cccgccgggc
     2401 gtcgacctcg gcctgggctt cctgggggaa gagcatgcgc gggtccttgc ccagggcctc
     2461 cgcccgcgaa tagccgaaga tccgctcggc ggccggattc cattcctgca ggcggaaggc
     2521 cgcgtcggtc tcgaggaccg ccaggggtga atgcgtcagg tggctgtggt tgcgctccag
     2581 cgcctcgtgc agggaggcgt tcatggcctg ggccagttcc agggcccgct gacgggtgcc
     2641 ggccagggac cacaccacgg cagccaggga acagctcacg gcgatgccgc ccagcaggag
     2701 gaacaggggc tggtttcggc cctccgcgtg gtagaagtcg ggcttgatgg cgtagcggag
     2761 ctgccagccc cggccgccga c
//
LOCUS       DATGWW010000150         2092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_283776, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000150 DATGWW010000000
VERSION     DATGWW010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_283776"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..210)
                     /locus_tag="VK150_02225"
     CDS             complement(<1..210)
                     /locus_tag="VK150_02225"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HLP30148.1"
                     /translation="MDTVIPAPVMPVIPVRGGGGGFPVRRIYCVGRNYADHAREMGGD
                     PNREPPFFFGKPQDTVVPGGGEVAYP"
     gene            complement(228..1148)
                     /locus_tag="VK150_02230"
     CDS             complement(228..1148)
                     /locus_tag="VK150_02230"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HLP30149.1"
                     /translation="MVTGKEGGPLGEGIRAFHLEQQARGVSPHTARAQGGDLAKLLDH
                     AVRSRWQSWEISPRTLRGFALELGDRGLDPASQARILSTARTFFAWLWETRRIPQNPA
                     SGLRNPKQPKRLPAFLTEGESQALLDLPPAVDFPSARLACLLELLYASGLRVSELVGL
                     DLQDLLPEERTLRVLGKGRKERLVPYHAQAAAILEAYLAFRSAFLAMKALPPSPAIFL
                     NQRGGRLTPTSVRSMLRLALQAAAVRAKVSPHALRHSFATHLLNRGMDLRAIQELLGH
                     ASLSTTQRYTHLGLEELARTYEKAHPRAKS"
     gene            1181..>2092
                     /locus_tag="VK150_02235"
     CDS             1181..>2092
                     /locus_tag="VK150_02235"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLP30150.1"
                     /translation="MAQPIETIAQLFYQAAERNLPDALAVKRNGVYVPIPHAELVAQV
                     ERLALAMATRGLQAGDHVAIMSENRPEWAVADYACAILGMPDVTIYATLNPPQAAFIL
                     RDSQSRWVICSDRAQLDKVLAHWDQLPDLKAAVLLDGDLPADTGRTLVTWATLQAEGE
                     AMEARRPEVRTWAALRKPSDVLTLIYTSGTTADPKGAVLTHGNLVSNVLSSLQAVNMA
                     EGHRCLSFLPLTHIFERMAGHFLMMHIGASIYYAESVNTVAADLMEVHPTVIASVPRI
                     YEKVFGRIYDSVASSSLVKRLIFHWSME"
BASE COUNT          323 a          741 c          714 g          314 t
ORIGIN      
        1 aggataggcg acctcgcctc cgcccggcac caccgtgtcc tggggcttgc cgaagaagaa
       61 gggcggttcg cggttggggt cgccgcccat ctcgcgggca tggtcggcgt agttccgtcc
      121 cacgcagtag atccggcgaa cggggaatcc cccgccaccg ccccggacgg ggatgacagg
      181 catgacgggg gcagggatga cggtatccat ggtccagaat ctccggttca gctcttggcc
      241 cgcggatggg ccttctcgta ggtgcgggcc agttcctcca gcccgaggtg agtgtagcgc
      301 tgggtggtgc tcaggctcgc gtggcccagg agttcctgga tggcccgcag gtccatgccg
      361 cggttcagca ggtgggtggc gaagctgtgc cgcagcgcgt gggggctcac cttggcgcgc
      421 accgcggctg cctggagagc caggcggagc atggaccgca cactggtggg cgtgagacgc
      481 ccgccccgct ggttcaggaa gatcgccggg ctgggcggca gggccttcat ggccaggaag
      541 gcggagcgga aggcgagata ggcctcaagg atggccgccg cctgggcgtg atagggaacg
      601 agccgctcct tgcgaccctt gcccagcacc cggagcgtcc gctcttccgg cagcaggtcc
      661 tggaggtcca ggcccaccag ctcggacacg cgcaggcccg aggcgtagag cagctccagc
      721 aggcaagcca ggcgcgcaga cgggaagtcc accgccggcg gcagatccag cagggcctgg
      781 ctctcgccct cggtgagaaa ggccgggagc cgcttgggct gcttgggatt ccgcaagccc
      841 gaggccgggt tctgggggat gcggcgggtt tcccacagcc aggcgaaaaa ggtgcgggcc
      901 gtggagagga tgcgcgcctg gctggccgga tccaggcccc ggtcgccgag ttccagggcg
      961 aagccccgca gggtgcgggg gctgatctcc cagctctgcc agcggctccg caccgcgtgg
     1021 tccagcagct tggccaggtc gccgccctgg gcgcgggccg tatgcggcga gacgccccgc
     1081 gcctgctgct cgaggtggaa ggcccggatc ccctccccca gcggcccccc ttccttccct
     1141 gttaccatgc ggtcacatcc cctggatatc cggagtcatt gtggcgcagc ccatcgaaac
     1201 cattgcccag cttttctatc aggcggccga gcgcaacctg ccggatgcct tggcggtgaa
     1261 acggaacggc gtgtacgtgc ccatccccca cgccgagctg gtcgcccagg tcgagcgcct
     1321 ggccctggcc atggcgaccc ggggcctcca ggcgggagac cacgtggcga tcatgtcgga
     1381 gaaccgcccc gagtgggccg tggccgacta tgcctgcgcg atcctgggca tgccggacgt
     1441 caccatctac gccaccctga acccgcccca ggccgccttc atcctgcggg acagccagtc
     1501 gcgctgggtc atctgctccg accgcgccca gctggacaag gtgctcgccc actgggacca
     1561 gctgccggac ctgaaggccg ccgtgctgct ggatggcgac ctgcccgcgg acacgggccg
     1621 caccctcgtc acctgggcca ccctccaggc cgaaggcgaa gccatggagg cccggcggcc
     1681 cgaggtccgg acctgggccg ccctgcggaa gccctcggat gtgctgaccc tcatctacac
     1741 ctccggcacc accgccgatc ccaagggcgc ggtcctcacc cacggcaacc tggtgtccaa
     1801 cgtgctcagc tccctgcagg ccgtgaacat ggccgaaggc caccgctgcc tcagcttcct
     1861 gcccctcacg cacatcttcg agcggatggc cgggcacttc ctgatgatgc acatcggcgc
     1921 ttccatctac tacgccgaga gcgtgaacac cgtggccgcc gacctgatgg aggtgcaccc
     1981 gacggtgatc gcctccgtcc cccgcatcta cgagaaggtc ttcggccgca tctacgacag
     2041 cgtggcgtcc tccagcctcg tgaaacggct catcttccac tggtccatgg aa
//
LOCUS       DATGWW010000151         3280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_283896, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000151 DATGWW010000000
VERSION     DATGWW010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3280
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_283896"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..431
                     /locus_tag="VK150_02240"
     CDS             <1..431
                     /locus_tag="VK150_02240"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HLP30151.1"
                     /translation="NLDLFPKEAPGTVANFVKLIESGFYDGLAFHRVIPDFVIQGGCP
                     NTKPGASGMPGTGGPGWKIKCETAGNPHQHKLGAVSMAHAGKDTGGSQFFVVNGDRRN
                     VAHLDGVHTVFGQCASDADIKVVQSIKANDRIIKATVVEA"
     gene            518..1096
                     /locus_tag="VK150_02245"
     CDS             518..1096
                     /locus_tag="VK150_02245"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HLP30152.1"
                     /translation="MDRPSHENLPRCGWCGGDPLYIAYHDEEWGVAAHDDRHLFEMLI
                     LEGAQAGLSWITILRKREAYRKAFLGFDPVRVAALSDQDLEQILLDPGIVRNRLKVSS
                     ARDNARAFLDVQREFGSFDAYLWTFVNGKPKVNHPKALSDVPAVTSEAEALSKALKKR
                     GFRFVGPTIMYAYMQAVGMVDDHVATCWKRRG"
     gene            1128..3029
                     /gene="metG"
                     /locus_tag="VK150_02250"
     CDS             1128..3029
                     /gene="metG"
                     /locus_tag="VK150_02250"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF008900.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HLP30153.1"
                     /translation="MSKPFYLTTPIYYVNDRPHIGHTYTTVLADVIARFHRMRGEDVF
                     FLTGTDEHGQKVEKAAAARGITPKQLADEVVANYTELWKAMGMTHFRFIRTTDADHRE
                     QVQRLFKRLLDKGDIYKSTYKGLYSVSDEAYVTETQAKELQAQGLAHQLVELEEETYF
                     FRLSAYQDRLLKHFEEHPEFVQPDFRFNEVKRFVEGGLQDLSISRTSITWGIPVPGDE
                     KHVIYVWFDALLNYLTGCPPFAWPPDLQIVGKDILRFHAVYWPAFLMAAGMFQPTTIL
                     AHGWWLMGDDKMSKSKGNVVRPDTLLHFGNDALRFYFMRDMQVGHDRGFSFEGFMDRL
                     NADLANGLGNLASRTLSMIQRYRGGVVPMPATFDEQDQAMASQLLEVFPDYLEKARAN
                     DFHGALDALWTYLRTLDGYIVKAEPWKLAKDPANDPKLDAVLANLYRALRATALLVAP
                     VMPGLAQTLWESLGHSTQVAETTFHGFALDGPAIGPIGDPKPLFQRIDKEKELNDLLP
                     PEAPAETKPSLDVPELRETVDADTFFKVDLRVGKVLEAERVPKSDKLIRMKVDIGLEQ
                     RTIVGGIGKAYEPADLLNRLVVVVANLAPRKLMGIESHGMLLAASDNASKPYLVAPPE
                     DAQPGFLVK"
     gene            3026..>3280
                     /locus_tag="VK150_02255"
     CDS             3026..>3280
                     /locus_tag="VK150_02255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30154.1"
                     /translation="MKRPVFSFEAEVLTDAPYDHVVGRLRGGPEAFKSLRALRGWTVA
                     EEVGDRLVLSWARTLAGAEESGQLSLRPDPKGAHLRLEGRM"
BASE COUNT          585 a         1146 c         1035 g          514 t
ORIGIN      
        1 tcaacctgga tctcttcccg aaggaggcgc ctggcacggt ggcgaacttc gtgaagctca
       61 tcgaatccgg cttctacgac ggcctggcct tccaccgcgt catccccgac ttcgtcatcc
      121 agggcggctg ccccaacacg aagcccggcg cctcgggcat gcccggcacc ggcggccccg
      181 gctggaagat caagtgcgag accgccggca acccccacca gcacaagctg ggcgccgtct
      241 ccatggccca cgccggcaag gacaccggcg gcagccagtt cttcgtggtg aacggcgacc
      301 gccgcaacgt ggctcatctc gacggcgtgc acacggtctt cggccagtgc gcctcggatg
      361 ccgacatcaa ggtggtgcag tccatcaagg ccaacgaccg catcatcaag gccacggtgg
      421 tcgaggcctg accaccctcc ctcgcggagg agcctgggcc gacgcccggc tctccgcgat
      481 gggtcggggc gatgggccgg ggcttcaagg ggactccatg gatcgtcctt cgcacgagaa
      541 cctgccgcgg tgtggatggt gcggaggaga tcccctctac atcgcctacc acgacgagga
      601 gtggggcgtg gcggcgcacg acgaccgcca cctgttcgag atgctgatcc tcgaaggtgc
      661 ccaggcgggg cttagctgga tcaccatcct ccgcaagcgg gaggcctacc ggaaggcctt
      721 cctgggtttt gacccggtcc gggtggcggc gctttccgac caggatctgg agcagatcct
      781 tctcgatccc ggcatcgtgc ggaaccgcct caaggtgtct tccgcccggg acaacgcccg
      841 ggccttcctg gacgtgcagc gggagttcgg cagcttcgac gcctacctgt ggaccttcgt
      901 gaacggaaag cccaaggtga accacccgaa ggccctgtcc gatgtccccg cggtgacgtc
      961 cgaggccgag gcgctgagca aggccctgaa gaagcgggga ttccggttcg tgggccccac
     1021 gatcatgtac gcctacatgc aggccgtggg catggtggac gaccacgtgg cgacctgctg
     1081 gaagcggcgg ggctgactcg ctgtagactg gaaggctcgg agcccctgtg tccaagccct
     1141 tctacctcac gacgcccatc tactacgtca acgaccggcc ccacatcggc catacctaca
     1201 ccacggtgct ggcggacgtg atcgcccggt tccaccgcat gcgcggcgag gacgtgttct
     1261 tcctcacggg caccgacgag cacggccaga aggtggagaa ggcggcggcg gcccggggca
     1321 ttacgcccaa acagctggcc gacgaggtgg tggccaacta cacggagctg tggaaggcca
     1381 tgggcatgac ccacttccgc ttcatccgca ccacggacgc cgaccaccgg gagcaggtgc
     1441 agcgcctctt caagcgactg ctggacaagg gcgacatcta caagtccacc tacaagggtc
     1501 tctactccgt gagcgacgag gcctacgtca ccgaaaccca ggccaaggag ctgcaggccc
     1561 agggcctcgc ccaccagctg gtggaactcg aagaggagac ctatttcttc cgcctgagcg
     1621 cctaccagga ccgcctgctg aaacacttcg aggaacatcc cgagttcgtg cagcccgact
     1681 tccgcttcaa cgaggtgaag cggttcgtgg aaggcggcct gcaggacctc tccatcagcc
     1741 gcaccagcat cacctggggc atccccgtgc ccggtgacga gaagcacgtc atctacgtct
     1801 ggttcgacgc cctgctcaac tacctcacgg gctgcccgcc tttcgcctgg ccgccggacc
     1861 tgcagatcgt gggcaaggac atcctgcgct tccacgccgt ctactggccg gccttcctca
     1921 tggccgcggg catgttccag cccaccacca tcctcgccca cggctggtgg ctcatgggcg
     1981 acgacaagat gtccaagagc aagggcaacg tcgtgcgccc ggacaccctc ctgcacttcg
     2041 gcaatgatgc gctgcgcttc tatttcatgc gggacatgca ggtgggccat gaccgcggtt
     2101 tcagcttcga gggcttcatg gaccgtctca acgccgacct ggccaacggc ctgggcaacc
     2161 tggcttcgcg caccctcagc atgatccagc ggtaccgggg tggcgtggtg cccatgcctg
     2221 ccaccttcga cgagcaggac caagccatgg cgagccagct gctggaggtc tttcccgact
     2281 acctggagaa ggcccgggcc aacgatttcc atggggccct ggacgcgctg tggacctacc
     2341 tccgcaccct cgatggctac atcgtgaaag ccgagccctg gaagctggcc aaggatcccg
     2401 ccaacgaccc gaagctcgac gcggtgctgg cgaatctcta tcgagctttg cgcgccacgg
     2461 ccctgttggt ggcgccggtg atgccggggc tcgcccagac cctctgggaa tccctgggcc
     2521 acagcaccca ggtggccgag acgaccttcc acggcttcgc ccttgatggc cccgccatcg
     2581 gtcccatcgg cgaccccaaa cccctgttcc agcgcattga caaggagaag gaattgaacg
     2641 acctgctgcc cccggaggcc ccggccgaaa ccaagcccag cctggatgtg cccgagctcc
     2701 gcgaaaccgt ggatgctgac accttcttca aggtggacct tcgcgttggg aaggtcctcg
     2761 aagccgagcg cgtgcccaag agcgacaagc tcatcaggat gaaggtcgac atcggcctgg
     2821 agcagcgcac catcgtgggc ggcatcggca aggcctacga gcccgcggat ctgctcaacc
     2881 gactcgtggt ggtggtggcc aacctcgccc cccgcaagct tatgggcatc gagagccacg
     2941 gcatgctcct ggccgccagc gacaacgcca gcaagccgta cctggtcgcg ccccccgagg
     3001 acgcccagcc cgggttcctg gtgaagtgaa gcgcccggtc ttcagcttcg aggcagaggt
     3061 cctcacggac gcgccctacg accacgtcgt ggggcggctc cgcggcggtc cggaggcctt
     3121 caagagcctc cgcgcgttgc gaggctggac tgtcgcggag gaagtcggcg accggctcgt
     3181 cctcagctgg gcccgcaccc tggccggcgc cgaggaatcg ggccagctca gcctgcggcc
     3241 agacccgaag ggcgcccacc tgcgcctgga gggtcgcatg
//
LOCUS       DATGWW010000152         3402 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_419889, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000152 DATGWW010000000
VERSION     DATGWW010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3402
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419889"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..803
                     /locus_tag="VK150_02260"
     CDS             <1..803
                     /locus_tag="VK150_02260"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HLP30155.1"
                     /translation="RFHPVRIVAVVGEDFGPEQMKVFDRRPIDLTGLSKVKGLSFHWK
                     GEYGYDLNEAKTLATDLNVFADFKPDLPAPYRESHYLFLGNIDPALQLDVVRQMTTRP
                     KWIALDTMNYWIRGSRPALEAVLKEVDILLVNDAEVRELTQEHSLIKAYRKIQALGPR
                     ILVVKRGEYGVALFTPEGIFAAPAYPLENVFDPTGAGDTFAGGFLGYLAWIERTDVTA
                     LKHATLVGSVMASFTVEQFSTERLEQISQDEVRNRLSLFSDMIRVEDL"
     gene            837..2009
                     /locus_tag="VK150_02265"
     CDS             837..2009
                     /locus_tag="VK150_02265"
                     /inference="COORDINATES: protein motif:HMM:NF027852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlgT C-terminal domain-containing protein"
                     /protein_id="HLP30156.1"
                     /translation="MHQPYRLHVGRMRALAMAPGLLAVLALAGPSLKAQEAAPANAVK
                     VEDHASKWDYPKELKVPEGSRTHLVQKGDTLWDLAGKYLGNPYAWPQIWELNQWVKDP
                     HWIYPGDPLVIDLARAVATAGSVPDAVANLRPDQRRADPSAVRRPELGFSFQDFIQLP
                     FFAAEGAEAHYKGQGAFVITSNKREDRQYLGEGETVYMNGGTDQGVKTGDRFLVLKTV
                     ARKQTHPTLKKKKLGDVVQQVGVVRVTLAQAKGSVVVVERTLDTVQVGDHLVRFTEPA
                     NLPLQIRTDTTEPVKVAGNAAVVVYTRDAKLHSAGGDMIIVDKGANDGLKVGDVLLAV
                     RVKSYPVGPEGQKRPDQETTTHYLGQALVVRADAQTATCRVLRSNEEIRLGDTVTP"
     gene            complement(2059..2652)
                     /locus_tag="VK150_02270"
     CDS             complement(2059..2652)
                     /locus_tag="VK150_02270"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmG family class I SAM-dependent
                     methyltransferase"
                     /protein_id="HLP30157.1"
                     /translation="MEPRLPPGLTPRLNQFLVLLERWNRTHALTALPLASRKEELLVD
                     AAALLPFLADLPAGARVVDLGTGMGTPAVVLALARPDLEVLGVDASGKKLAFVRQVAM
                     ELPVPNLKVVHGRLEDLPPLEADWGTAKALGTLGALAGWWARHGKPGRPFYALKGPDW
                     AEEALPAGWVAEPHPYVLPTRGQRVVVGLRFAPEAEA"
     gene            2886..>3402
                     /gene="ybeY"
                     /locus_tag="VK150_02275"
     CDS             2886..>3402
                     /gene="ybeY"
                     /locus_tag="VK150_02275"
                     /inference="COORDINATES: protein motif:HMM:TIGR00043.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HLP30158.1"
                     /translation="MTQTRPPFLIDWSSRSKMRGPGEQSLGKLLHALRDRLAPDAQGI
                     SLTYVDDRGMRKLNREHRGKNMTTDVLSFPSAAEKGAFPHLGDIVVSLPMADKMAKKF
                     GVSRRREVETLVIHAFLHLCGHDHETDRGEMMALQAQLERELLDEEPLAMSLKRGRKP
                     GSKVKKLKDGSR"
BASE COUNT          632 a         1176 c         1065 g          529 t
ORIGIN      
        1 gccgcttcca cccggtccgc atcgtggcgg tggtgggcga ggatttcggg ccggagcaga
       61 tgaaggtctt cgaccgccgg cccatcgacc tgacgggcct ctccaaggtg aaggggctca
      121 gcttccactg gaagggcgag tacggctacg acctcaacga ggcgaagacc ctggccacag
      181 acctcaatgt gttcgcggat ttcaagcctg acctgccagc gccctaccgg gaatcccact
      241 acctcttcct ggggaacatc gaccccgcgc tgcagctcga cgtggtgcgc cagatgacca
      301 cccgccccaa gtggatcgcc ctggacacca tgaactactg gatccggggc tccaggcccg
      361 ccctggaggc ggtcctcaag gaggtggaca tcctcctggt gaacgacgcc gaggtgcggg
      421 aactgaccca ggagcacagc ctcatcaagg cctaccgcaa gatccaggcc ctggggccgc
      481 ggatcctggt ggtcaagcgt ggtgaatacg gcgtggccct gttcacgccc gaggggatct
      541 tcgccgcccc cgcctacccc ctggagaacg tgtttgatcc gacgggcgcc ggggatactt
      601 tcgccggcgg cttcctgggc tacctcgcgt ggatcgagcg caccgacgtg acggcgttga
      661 agcacgcgac cctggtgggc tcggtcatgg ccagtttcac ggtggagcag ttctccaccg
      721 aacgcctcga gcagatcagc caggacgaag tccgcaaccg attgtcatta ttttcagata
      781 tgatccgcgt cgaagaccta taatcagcgc tacctaatcc tcactggggg tttcagatgc
      841 accagcccta ccgcctgcat gtcggccgga tgcgcgccct ggccatggcg cccggactcc
      901 tcgcggtcct ggcgctcgcc ggaccgagcc tgaaggctca ggaggccgcc cctgccaatg
      961 ccgtcaaggt tgaagaccac gcttccaagt gggactaccc gaaggagctc aaggttcccg
     1021 aaggctcccg gacccacctg gtccagaagg gcgacaccct ctgggatctg gctggcaagt
     1081 acctcggcaa tccctacgcc tggccccaga tctgggaact gaaccagtgg gtgaaggatc
     1141 cgcactggat ctaccctggc gaccccctgg tgatcgacct cgcccgggcc gtggccaccg
     1201 cgggctccgt gcccgatgcc gtggccaacc tgcggccgga ccagcgccgc gccgacccca
     1261 gcgccgtccg ccggcctgag ctgggcttct ccttccagga cttcatccag ctgcccttct
     1321 tcgccgccga gggcgccgag gcccactaca agggccaggg cgccttcgtc atcacctcca
     1381 acaagcggga ggaccgccaa tacctcggcg agggcgagac cgtctacatg aacggcggca
     1441 ccgaccaggg cgtgaagacc ggggaccgct tcctcgtcct caagaccgtg gcccgcaagc
     1501 agacccaccc caccctcaag aagaagaagc tgggcgatgt cgtgcagcag gtcggcgtcg
     1561 tgcgcgtgac cctggcccag gccaagggct cggtggtcgt ggtcgaacgc accctcgaca
     1621 ccgtgcaggt gggcgaccac ctcgtgcgct tcacggaacc cgccaacctg cccctgcaga
     1681 tccgcaccga caccaccgag ccggtgaagg tcgccggcaa tgccgccgtg gtggtctaca
     1741 cccgcgacgc caagctgcac tccgccgggg gcgacatgat catcgtcgac aagggcgcca
     1801 acgatggcct gaaggtcggt gacgtgctcc tcgccgtccg cgtgaagtcc taccccgtcg
     1861 gccccgaagg ccagaagcgg cccgaccagg agaccaccac ccactacctc ggccaggcgc
     1921 tggtggtccg cgccgacgcc cagacggcca cctgccgggt gctgcgctcc aacgaggaga
     1981 tccgcctcgg cgacaccgtc acgccctgag ccgcttcccg ctccaggcag aaggcccccg
     2041 accgggggcc ttcgcgcgtc aggcctctgc ttccggcgcg aaccggagcc ccaccaccac
     2101 ccgctggccc cgggtgggca gcacgtaggg gtgcggttcg gcgacccagc ccgcgggcaa
     2161 ggcctcctcc gcccagtcgg gtcccttcag ggcgtaaaag gggcggccag gcttgccgtg
     2221 ccgagcccac cagcccgcga gggcgcccag ggtgcccagg gccttggccg tgccccagtc
     2281 cgcctccagg ggcggcaggt cctccaggcg gccatggacc accttgaggt tgggcaccgg
     2341 tagttccatc gccacctggc ggacaaaggc cagcttcttc cccgaggcgt ccacgcccag
     2401 gacttccaga tccggccggg ccagggccag gaccacggcg ggggtgccca tcccggtccc
     2461 gaggtccacg acccgggccc cggcgggcag atccgccaga aagggcagca gcgccgccgc
     2521 gtccaccagg agctcttcct tgcgagaggc aagtggcagt gctgtcaagg catgggttcg
     2581 attccaccgt tccaggagga ccaggaactg gttgaggcgt ggcgtgagtc cggggggaag
     2641 gcgaggctcc atgcctccag gatgccaggg aaggctgact ttcgttgaat ttcggctctg
     2701 ccatccattt gtcttctgta ttcaacattt tgatggcgta ttattgactt gctggaagaa
     2761 aagcgatctg agaatacatg ggaaacatct gaccaattcc tgcatctagt attcggacgt
     2821 tgacgaatct cccaatatcg aacatgataa gggccctctg attgatcctg tgaaaggaat
     2881 tggccatgac ccagactcgc ccccctttcc tgatcgactg gtccagccgc agcaaaatgc
     2941 gcgggcccgg tgagcagtct ctcggcaaac tgctgcacgc cctcagagat cggctcgccc
     3001 ccgacgcgca aggcatttcg ctcacgtatg tcgacgatcg tggcatgaga aaactcaacc
     3061 gcgaacatcg cggaaaaaac atgacgaccg atgtgctgag cttcccctct gcggcggaga
     3121 agggcgcctt cccccacctt ggcgacatcg tcgtgagcct gccgatggcc gataaaatgg
     3181 ccaagaaatt cggcgtgagc cgccggcgcg aggtggaaac cctggtgatc cacgccttcc
     3241 tgcacctctg cgggcacgac cacgagaccg accgcggcga gatgatggcg ctccaggcgc
     3301 agttggaacg cgaactgctc gacgaggaac cgctggccat gagcctgaag cgcggccgca
     3361 agcccggaag caaggtgaag aaactgaagg acggctcgag gg
//
LOCUS       DATGWW010000153         2105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_323316, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000153 DATGWW010000000
VERSION     DATGWW010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2105
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323316"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            259..513
                     /locus_tag="VK150_02280"
     CDS             259..513
                     /locus_tag="VK150_02280"
                     /inference="COORDINATES: protein motif:HMM:NF024851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HLP30159.1"
                     /translation="MAITKVWIEEGCIVCNACEAECPDVFHVTDTSCNINGSVRKDGV
                     DSENRDEMSELNDDLQSSLEASIEAAAAGCPVEVIKFDKA"
     gene            complement(589..1050)
                     /locus_tag="VK150_02285"
     CDS             complement(589..1050)
                     /locus_tag="VK150_02285"
                     /inference="COORDINATES: protein motif:HMM:NF025070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheX"
                     /protein_id="HLP30160.1"
                     /translation="MNVAFINPFIESTLRSLDMMASISAEKVGLSVKEDLITTYDISA
                     IIGITGDTSGSIILSFPVSLACRIASNMLMEEVATLDQSVEDAIGEIGNIVVGDARRL
                     LIQDGFSLSISVPTVVVGQGHKISRSGDVPCIAIPFKTEFGEFEVNVGLKE"
     gene            1168..1617
                     /locus_tag="VK150_02290"
     CDS             1168..1617
                     /locus_tag="VK150_02290"
                     /inference="COORDINATES: protein motif:HMM:NF020977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HLP30161.1"
                     /translation="MLTRIQADLKTAMLARDAGRTQVLRMALAAYKNEAVAKGLGPQG
                     VLDEADALAVLKRLVKSREDSVAQFEKVGQADRAAQERAEIELLKPYLPAMIEGADLE
                     AAVKAAIASTGATAKKDMGLVMKALQAAHGGAFDGKVASALVQSLLG"
     gene            1722..>2105
                     /locus_tag="VK150_02295"
     CDS             1722..>2105
                     /locus_tag="VK150_02295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30162.1"
                     /translation="MKQSKLLIQTLRETPRDADVVSQQLMMRAGMIQKVAAGIYSYLP
                     LAFRSIRKFEEIVREELAKDGCQELLMPAVLPAELWQESGRWKFYGDELLRFCDRKAK
                     AELAERRARGEKPDEREFYNFCLGPT"
BASE COUNT          369 a          673 c          732 g          331 t
ORIGIN      
        1 ggtgaccagc agcgtgtggc ccgcgggcgt gggcggcagc gcgccgcagt catcggtcaa
       61 gccggccccg ccgggcagcg attcccggat ccgggcaaga attcccgtct ccttcaatgc
      121 catgggcgga cctccgtcac aactccagtc tcccacggcc cagggggcca ggcgacgctt
      181 ggtccgtggc gggggcgatg ctaggttgga tgggttcgcc catcgctcgg gcccccattg
      241 aatgtcgagg agacgaccat ggccatcacc aaagtgtgga tcgaagaagg ctgcatcgtg
      301 tgcaacgcct gcgaggccga gtgccccgac gtgttccacg tcaccgacac cagctgcaac
      361 atcaacggca gcgtccgcaa ggacggcgtg gacagcgaga accgtgacga gatgagcgag
      421 ctgaacgacg acctccagtc ctccctggag gccagcatcg aggccgccgc cgccggctgc
      481 ccggtggaag tcatcaagtt cgacaaggcc tgatccggga gcggccccgc cgttccagcc
      541 gaaaagggcg cccgccgggc gcccttttcg ctgcttgggg tcgggtggct attccttcag
      601 gcccacattg acttcaaatt ccccgaattc cgtcttgaag gggatggcga tgcaaggcac
      661 gtcgccgctg cggctgatct tgtggccctg gcccaccacc accgtgggca ccgagatgga
      721 gaggctgaat ccatcctgga tgagcaggcg gcgggcgtcg cccaccacga tgttgccgat
      781 ctcgccgatg gcgtcctcca ccgactggtc cagcgtggcg acctcctcca tgagcatgtt
      841 gctggcgatt cggcaggcca ggctcaccgg gaagctgagg atgatggagc ccgaggtgtc
      901 gcccgtgatg ccgatgatgg cggagatgtc gtaggtggtg atcaggtctt ccttgaccga
      961 caaccccacc ttctcggccg agatgctggc catcatgtcc aggctgcgaa gggtggattc
     1021 gatgaaggga ttgatgaagg cgacgttcat ggggcccctg ggattgaact tggttctgtt
     1081 tcggccaggg aattctccgg catgatttct gtcgttgagg gtggctcgcg ggccagtcag
     1141 gatgaagggt tgcagccgga ggctcccatg ctcacgcgta tccaggcaga tctcaaaacc
     1201 gccatgctgg cccgggacgc cggccggacg caggtgctcc gcatggccct ggccgcctac
     1261 aagaacgagg ccgtggccaa gggtctgggc ccccagggcg tgctcgacga ggccgatgcc
     1321 ctggcggtgc tcaagcgcct ggtgaagtcc cgggaggaca gcgtcgccca gttcgagaag
     1381 gtgggccagg cggatcgggc cgcccaggag cgggcggaga tcgagctgct gaagccctac
     1441 ctgcccgcca tgatcgaggg ggctgacctc gaggccgccg tgaaggccgc catcgcctcg
     1501 acgggcgcca ccgcgaagaa ggacatgggc ctggtcatga aggccctcca ggccgcccac
     1561 ggcggcgcct tcgacggcaa ggtcgccagc gccctggtgc agagcctcct gggctgaggc
     1621 ggcgcagggg accgcccgaa gctccgagaa ggatcccggg cgcgtgaatc ctgcccggaa
     1681 ggagcgggct cctgggataa actcgaaggt tcgaggcccc catgaagcag tcgaagctcc
     1741 tgatccagac cctgcgcgag accccgcgcg acgccgacgt ggtgagccag cagctcatga
     1801 tgcgggccgg catgatccag aaagtggccg cgggcatcta cagctacctg cccctggcct
     1861 tccggagcat ccgcaagttc gaggagatcg tccgcgagga gctggccaag gacggttgcc
     1921 aggagctgct catgcctgcg gtgctgcccg ccgagctctg gcaggagagc ggccggtgga
     1981 agttctacgg tgatgagctg ctgcgcttct gcgaccgcaa ggccaaggcg gagctggccg
     2041 agcgccgggc ccggggcgag aagcccgacg agcgcgagtt ctacaacttc tgcctgggcc
     2101 ccacc
//
LOCUS       DATGWW010000154         1975 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_239266, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000154 DATGWW010000000
VERSION     DATGWW010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1975
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239266"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1975)
                     /locus_tag="VK150_02300"
     CDS             complement(<1..>1975)
                     /locus_tag="VK150_02300"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLP30163.1"
                     /translation="TAGALSTAQSVREALPELRKGLPEGMKLEMFYDQGEFVRHALSG
                     VTLALLLGGAFVGLVLVVHLGNLRGALVVIILLPLATLGAALPLAWMGLGLNALTLGG
                     LAISVGLLVDAGVIMVENLTHRLHQAHAADAPGRRATLVVAASEVGIPILIAVLVILA
                     VFIPLLAIGGVAGKLYAPLAVAVGSAMTLSLILSFTLVPTLVERFLPPGTVLEEPRFV
                     TRLKEYYRPALTWALSHGAKLLAVAGTLTAASIVLALGLGSNFLPSLDEGAFILTPNF
                     PAETSLEAVDQGNQMLGRRIRQVPGVKDYYRRTGRGDVTEDPMPHYSSDILILLVPGA
                     DPKKVEAALGALAEEMPYPVELTTPMNMKISEGLGGTPADLQVKLFNPDMAALEAVVP
                     DLRKQLAALPGIKSVAPDTGGPLPKWQVKIDDRDLRHLGVPRPLLLQTLQAALQGLEV
                     APRFDGPQRIGRVVKFQVRGDVTPERLQRLPLVLDDGRVLELGQVVTFEETTTPSMIR
                     RESSQRRLALNLRTEGDLGGAAKRVDALLASFPLPKGTVVKLGGRIEEARETQRRLLI
                     AIGAALAIVVGLLYVALNRWWEVAVVLATLPNAFAGGLFSLWLAGETWNVSSIVGMIG
                     LFGVAVQNSLVLITQTKDLYASGLSLRQSVLEAS"
BASE COUNT          303 a          683 c          721 g          268 t
ORIGIN      
        1 gctcgcctcc agcaccgact gccgcaggga caggccggag gcgtacagat ccttggtctg
       61 ggtgatgagg accaggctgt tctgcaccgc cacgccgaag aggccgatca tgccgacgat
      121 ggaactcacg ttccaggtct cgcccgccag ccagaggctg aagagcccgc ccgcgaaggc
      181 gttgggcagg gtcgccagca cgacggccac ctcccaccag cggttgaggg ccacgtagag
      241 caggcccacc acgatggcca gggcggcccc gatggcgatc agcaggcgcc gctgggtttc
      301 ccgcgcctcc tcgatgcgcc cgccgagctt caccaccgtg cctttcggca gcgggaacga
      361 ggccagcagg gcgtccacgc gcttggcggc gccgcccagg tcgccctcgg tgcgcaggtt
      421 cagcgcgagc cgccgctggc tggattcccg gcggatcatg ctgggggtgg tggtctcctc
      481 gaaggtcacc acctggccca gctccagcac gcgcccgtcg tccagcacca ggggcaggcg
      541 ctggagccgc tccggcgtga cgtcgccgcg aacctggaac ttcacgaccc ggccgatgcg
      601 ctggggacca tcgaagcggg gcgcgacctc aaggccctgg agggcggcct gcagcgtctg
      661 gagcagcagg ggccggggca cgcccaggtg ccggagatcg cggtcgtcga tcttcacctg
      721 ccatttgggc aggggaccgc cggtgtccgg ggccacggat ttgatgccag gcagggccgc
      781 cagctgcttg cgcaggtcgg ggacgacggc ctccagcgcg gccatgtcgg ggttgaagag
      841 cttcacctgc aggtcggcgg gcgtgccgcc gaggccctcg gagatcttca tgttcatggg
      901 cgtcgtcagc tccacggggt agggcatctc ctcggccagg gcgccgaggg cggcctcgac
      961 cttcttggga tccgcgccgg gcaccagcag gatgaggatg tcgctggagt aatgcggcat
     1021 cggatcctcg gtgacatcgc cgcggcccgt gcgccggtag tagtccttca cgcccggcac
     1081 ttggcggatg cgccggccca gcatctggtt gccctggtcc acggcctcca ggctggtctc
     1141 cgccgggaag ttcggcgtga ggatgaaggc gccctcgtcg aggctcggca ggaagttgct
     1201 gccgagtccc agggccagca cgatgctggc ggccgtgagg gttcccgcca cggccagcag
     1261 cttggcgccg tggctcagag cccaggtcag cgccggccgg tagtattcct tcagtcgcgt
     1321 gacgaaccgg ggctcctcca gcaccgtgcc cggcggcagg aaccgctcca ccagggtggg
     1381 caccagggtg aagctgagga tgaggctgag ggtcatggcc gagccgacgg ccacggccag
     1441 cggcgcgtag agcttgcctg ccacaccgcc gatggccagc agcgggatga acaccgcgag
     1501 gatcaccagc acggcgatga ggatgggaat ccccacctcc gaggccgcca ccaccagcgt
     1561 ggcccgccgg cccggcgcgt cggccgcgtg ggcctggtgc agccggtggg tgagattttc
     1621 caccatgatg acgccggcat ccaccagcag gcccacggag atggccaggc cgccgagggt
     1681 gagggcgttc aggcccaggc ccatccaggc gagggggagc gccgcgccga gggtggcgag
     1741 gggcagcagg atgatgacca ccagcgcgcc ccgcaggttg cccaggtgca ccacgagcac
     1801 caggcccacg aaggcgccgc ccagcagcag cgccagggtg accccgctga gggcgtggcg
     1861 cacgaactcg ccctggtcgt agaacatctc gagcttcatg ccttcgggca ggcccttgcg
     1921 cagctccggc agggcctcgc gcacggattg cgccgtgctc agggccccgg ccgtg
//
LOCUS       DATGWW010000155         1614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_323404, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000155 DATGWW010000000
VERSION     DATGWW010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323404"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..724)
                     /locus_tag="VK150_02305"
     CDS             complement(<1..724)
                     /locus_tag="VK150_02305"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HLP30164.1"
                     /translation="MPETAFDLIVIGAGPGGYVAAIRAAQLGLKVACVEREEALGGTC
                     LRVGCIPTKALLEASEKFHEAKAGLARFGVKTSGVELDLPAMLRHKDAVVAANTKGIE
                     GLFRKGKIERFLGHGRLAGPGKVMVEPTGKGQGPGKPAEILSAGHILIATGSKVAMLP
                     DVEVDGKVIGTSTEAIAYAEVPKHLVVIGAGAIGLELGSVWSRLGAKVTVIEFLNRIL
                     PGLDMEIAAEAQKILAKQGLEFR"
     gene            complement(887..>1614)
                     /gene="sucB"
                     /locus_tag="VK150_02310"
     CDS             complement(887..>1614)
                     /gene="sucB"
                     /locus_tag="VK150_02310"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: protein motif:HMM:TIGR01347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0006554 - lysine catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HLP30165.1"
                     /translation="VASTASAGGRGEEIVPMSMLRRRVAERLVEAQRTAALLTTFNEV
                     DMSSVMELRQKHQEAFQKRHGIKLGFMSFFARAVVDALRLVPQLNAEVRGTDIVYRHF
                     VDISVAVSGPKGLVVPVLRNADRMGFAEIELAIQDFGKRAQANALKLEELQGGTFTIS
                     NGGVFGSLLSTPIVNPPQSGVLGLHAIQDRPVAREGQVVIRPMMYVALTYDHRIVDGR
                     EAVTFLKRIKEGVEDPARLLLEV"
BASE COUNT          275 a          497 c          545 g          297 t
ORIGIN      
        1 ggcggaactc gagaccctgc ttggccagga tcttctgggc ctccgcggct atttccatgt
       61 ccaggccggg gaggatgcgg ttcagaaact cgataacggt gaccttggcg cccaggcggc
      121 tccagaccga tcccagctcg agcccgatgg cccccgcgcc gatgacgacg aggtgctttg
      181 ggacttcggc gtaggcgatg gcctcggtgc tggtgccgat gaccttgccg tccacttcga
      241 catcggggag catggccacc ttgctgccgg tggcgatgag gatgtgtccc gcgctcaaga
      301 tctccgccgg cttgccgggg ccctgaccct tgccggtggg ctcgaccatg accttgccgg
      361 gtccggccag gcggccgtgg ccgagaaagc gctcgatctt ccccttgcgg aaaaggcctt
      421 cgatgccctt ggtgttggcg gccaccacgg cgtctttgtg gcgcagcatg gcggggaggt
      481 cgagctcgac tccggaggtc ttcaccccga agcgggccag gccggccttg gcctcatgga
      541 acttctcgct ggcttcgagc agggccttgg tggggatgca gcccacgcgc aggcaggtac
      601 cgcccagggc ctcctcgcgc tccacgcagg ccaccttgag gcccagctgg gccgcgcgga
      661 tggcggccac gtagccgcct ggaccggctc cgatgacgat gaggtcgaat gcggtctcgg
      721 gcatgggtta cctcaaataa aaaattgaaa attggcaaat tgaaaattga aaatttagga
      781 aagaataccc gcgacgtaac tcggggggta actgaggggc acggctgcga tccgtccacc
      841 agtcttaaaa ttttcaattt tcaattttcc ctttgaaaat atcctctcag acttccaaca
      901 gcagccgcgc gggatcttcc acgccttcct tgatgcgttt gaggaaggtg accgcctcgc
      961 ggccgtccac gatgcggtgg tcgtaggtga gggccacgta catcatgggc cggatgacca
     1021 cctggccttc cctggcgacc gggcggtcct ggatggcgtg caagccgagg acgccgctct
     1081 ggggcgggtt gacgatgggg gtggaaagca ggctgccgaa cacgccgccg ttgctgatgg
     1141 tgaaggtgcc gccctgcaac tcttcgagct tgagggcgtt ggcctgcgcc cgcttgccga
     1201 aatcctggat ggcgagttcg atctcggcga agcccatgcg atcggcattg cgcaataccg
     1261 ggaccaccag gcccttgggg ccgctcacgg ccaccgagat gtccacgaag tggcggtaga
     1321 cgatatcggt gccgcgcacc tcggcgttga gctggggcac caggcgcaga gcgtccacga
     1381 cggcgcgcgc gaagaaggac atgaagccga gcttgattcc atgtcgtttc tggaaggcct
     1441 cctggtgctt ctgccggagt tccatgacgg aagacatgtc cacctcgttg aaggtggtga
     1501 ggagggcggc ggtccgctgg gcctccacca ggcgctcggc gacgcgccgg cgcagcatgc
     1561 tcatgggcac tatctcctcg ccgcggccgc cggcggaggc cgtggaggcc acgg
//
LOCUS       DATGWW010000156         1507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_142206, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000156 DATGWW010000000
VERSION     DATGWW010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142206"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..573)
                     /locus_tag="VK150_02315"
     CDS             complement(<1..573)
                     /locus_tag="VK150_02315"
                     /inference="COORDINATES: protein motif:HMM:NF039255.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family protein"
                     /protein_id="HLP30166.1"
                     /translation="MRRADRLFQIVQLLRRDRISTAAKLARELEISERTLYRDIAHLM
                     ASGVPIESEAGVGYSLSRHFDLPPLMLSAEEGEALLLGARTIEAWADPALREAARSLL
                     RKVEAVLPPNRREAFAALPFLVPDVHVPPNTAHFLGDLRRGLREKQRLRLGYVRADGT
                     PSERAVQPVGLIFWGYRWHLAAWCELREALR"
     gene            complement(662..1135)
                     /locus_tag="VK150_02320"
     CDS             complement(662..1135)
                     /locus_tag="VK150_02320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30167.1"
                     /translation="MESGAYLEVMVRGPAKGFPTVFVGDTDQVEVLHASAALGNVSYI
                     RTHGTWARKGVFEWQVRDRAVSTATLAKEAEAFLEAQGWLANASRTGEPTRVFRIALK
                     PSRRFIGVVFLSTDTMAVSHWPAGLRDDCLNLALLRGESPDALQFNPVMWFRHSP"
BASE COUNT          237 a          546 c          509 g          215 t
ORIGIN      
        1 gcgcagggcc tcccgcagct cgcaccacgc agccaggtgc cagcggtagc cccagaagat
       61 caggcccacc ggctggaccg cccgctccga gggcgtgccg tctgcccgga cgtacccgag
      121 ccgaagccgc tgtttctccc gcagtccgcg ccggaggtcg ccgaggaagt gcgccgtgtt
      181 gggcggcacg tgcacgtccg gcaccaggaa gggcagggcg gcgaaggcct cccggcggtt
      241 cggcggcagc accgcctcca ccttccggag caggcttcgg gcggcttcgc gcagggctgg
      301 atcggcccag gcctcgatgg tgcgggcccc caggagcagg gcctcgccct cctccgcgga
      361 gagcatcagg ggcgggaggt cgaagtgccg ggacaggctg taacccacgc cggcctcgct
      421 ttcgatgggc acccccgaag ccatcaagtg ggcgatgtcc cggtacaggg tgcgctcgct
      481 gatctccagt tcccgcgcca gcttcgcggc ggtgctgatc cggtcccgcc gcagcagttg
      541 cacgatctgg aacagccggt ccgctcgccg catgcctgga ggcctccacc ccggcgggcc
      601 gcccggccgc ctgcctgcat ggtagctgcg tcgggcccct cggggttcag cggggaaggg
      661 gtcaaggtga gtgccgaaac cacatgaccg ggttgaactg aagcgcgtct gggctctcgc
      721 cgcggagcag cgcaaggttc aggcaatcgt cccgcagacc cgccggccag tgggataccg
      781 ccatcgtgtc cgtggacagg aagaccaccc cgatgaaccg ccgggagggc ttcagggcga
      841 tccggaagac tcgtgtgggt tcacccgtcc ggctggcatt ggcaagccat ccctgggctt
      901 ccagaaaggc ttcggcctcc ttggccaaag tcgctgtgct gacagcccga tcgcgaacct
      961 gccattcgaa gacacccttc cgggcccagg ttccatgggt ccggatgtaa gacacgttgc
     1021 ccagcgcggc agaggcgtgc agcacttcga cctgatccgt gtcccccacg aagacggtgg
     1081 ggaacccttt cgccggcccc cttaccatca cctcgaggta ggcgcccgat tccatcagcc
     1141 agacatcgcc gccgccactg aggtgctccc gcctggcgcc cgcccaggtc tcaggacgga
     1201 gagcgccatc catcggtggc gtccctccaa aaagcgctag cgccgcgaac cagatcagac
     1261 agacagtgcg ccgtggcatg cgggcctcct tggatgtcag gaaagcctgg gcgtcccggg
     1321 cgcgtgccgc cagacggttg gggcgctccg cgtgctcccc gacgccaccc gaagccccct
     1381 ggaatctcta cctgaccgct atttcgcgcc gccccccagc cgcgcgccat cccaggggca
     1441 gaagctccag gactgcggca gcgactcccg gcaggtgggg caggcctggg gcgccgagag
     1501 gctgtcc
//
LOCUS       DATGWW010000157         2414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_323612, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000157 DATGWW010000000
VERSION     DATGWW010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323612"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(27..269)
                     /locus_tag="VK150_02325"
     CDS             complement(27..269)
                     /locus_tag="VK150_02325"
                     /inference="COORDINATES: protein motif:HMM:NF020917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043231 - intracellular membrane-bounded
                     organelle [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDGSH iron-sulfur domain-containing protein"
                     /protein_id="HLP30168.1"
                     /translation="MSEGFPKVAAKAPAVLDLEPGTYFWCTCGLSAKQPFCDGAHKAC
                     DLRPMKVEITEAGKKALCQCKHTKTAPYCDGSHCAL"
     gene            complement(281..868)
                     /locus_tag="VK150_02330"
     CDS             complement(281..868)
                     /locus_tag="VK150_02330"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HLP30169.1"
                     /translation="MRHPFRAALATLALAAIPLMAQDAYKIDPVHSEISFKIRHLLAK
                     TSGRFTKFNGTIKVDTADISKSSVEVSIDVASINTDNEKRDAHLRTPDFFDVEKFPTI
                     TFKSTSVKEVAKGKLEVTGDFTLHGVTKRITFPITNAGTQPGMQPGSTVAGFVDGALT
                     INRNEYGIKTYPGVLGDDVAISLNIEAGKAGAAKK"
     gene            979..1470
                     /locus_tag="VK150_02335"
     CDS             979..1470
                     /locus_tag="VK150_02335"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HLP30170.1"
                     /translation="MHIQEELQITKPLEPGHEVALALLLTREYVARLFEEGLYEPEGL
                     SDQQFNVLRILKGGPKDGYLVKDIRCRMIYRFADVPRLVNRLEARGLVKRCENPADRR
                     GSRVQITAKGLALEARMHGRHQALCQQVDRCLQAEERVTLLALLERLRNDHRSQLEAL
                     GKP"
     gene            complement(1558..>2414)
                     /locus_tag="VK150_02340"
     CDS             complement(1558..>2414)
                     /locus_tag="VK150_02340"
                     /inference="COORDINATES: protein motif:HMM:NF012566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NADPH-quinone oxidoreductase"
                     /protein_id="HLP30171.1"
                     /translation="VADHIVCVGVNAVDIGAFTAFLYLFKQRETVYDLFEMAAGQRLH
                     TSFTRIGGLFRDIPEGFVPLTERFLVECEAAIDECERLLTRNPIWHDRTKGIGAIGPE
                     DAVNWGYTGPCLRAAGVPQDLRKAQPYLGYETYDFDIPVGTTGDVFDRYLVRVEEMRQ
                     SLRIIRQVLDRLEPGPVCVEDPKISLPPKEKVYTRMESLIHHFKLIMHGMEMPVGEVY
                     SATEAANGELGFYIVSDGGKNPYRIRVRPPCLPIFSSFHDQVKGTLIADAVAVLGAMN
                     IIAGELDR"
BASE COUNT          389 a          734 c          836 g          455 t
ORIGIN      
        1 ctccatcacg tcagacccgc tggaactcag agcgcgcaat ggctcccatc gcaatagggg
       61 gccgtcttgg tgtgcttgca ctggcagagg gccttcttgc ctgcctcggt gatctcgacc
      121 ttcatgggcc ggagatcgca ggccttgtga gccccgtcgc agaagggctg cttggcgctc
      181 aggccgcagg tgcaccagaa gtaggtcccg ggttccaggt ccaggaccgc gggggccttg
      241 gcggcgactt tcgggaatcc ttcgctcatg gtccgcctcc tcacttcttg gcggcgccgg
      301 ccttgccggc ctcgatgttc aggctgatgg ccacgtcgtc ccccaggacg ccggggtagg
      361 tcttgatgcc gtattcgttg cggttgatgg tgagggcgcc gtccacgaag ccggccacgg
      421 tgctgccggg ctgcatgccg ggctgggtgc ccgcgtttgt gatggggaag gtgatgcgct
      481 tggtcacgcc gtgcagggtg aagtcgccgg tcacttccag cttgcccttg gccacttcct
      541 tcaccgaggt gctcttgaag gtgatggtcg ggaacttctc gacgtcgaag aaatcgggcg
      601 tcctcaggtg cgcgtcccgc ttctcgttgt cggtgttgat gctggcgaca tcaatgctca
      661 cctcgacgct ggacttgctg atgtcggccg tatccacctt gatggttccg ttgaacttcg
      721 tgaaccggcc gctggtcttg gccaacagat ggcggatctt gaagctgatc tcgctgtgga
      781 cggggtcgat cttgtaggcg tcctgggcca tcagggggat ggccgcgagg gcgagggtgg
      841 ccagggcggc gcggaagggg tgacgcatgt tgcctccagg gaataggtgt ttcaccatgc
      901 aatcaagtct aggccggatt tcgagagttg caacaccttt tttgaaaaat ctgtcaaact
      961 gcctgagtgg gagttgtcat gcacattcaa gaggaactcc agatcaccaa gcccctcgag
     1021 ccgggccacg aggtggccct ggccttgctc ctcacccggg aatacgtggc caggctcttc
     1081 gaagagggcc tctacgaacc cgaaggactc tctgatcaac agttcaacgt gctgcgcatc
     1141 ctcaaggggg ggccgaagga cggctacctc gtgaaggaca tccgttgccg gatgatctac
     1201 cgcttcgcgg atgtgccccg cctcgtgaac cgcctggagg cccgggggct ggtcaagcgc
     1261 tgcgagaacc ccgcggaccg ccggggcagc cgcgtccaga tcaccgccaa gggcctggcc
     1321 ctggaggcga ggatgcacgg ccggcaccag gccctttgcc agcaggtgga ccgctgcctg
     1381 caggccgagg agcgggtcac cctcctggcc ctgctggagc ggttgcggaa cgatcaccgg
     1441 tcccagctcg aggcgctggg aaaaccctga accaccgcga ggcggcaagc cgttcgggag
     1501 aggccgcggg ccctgcctcg gccttatcgc gcttgggccg ttgcgggtcc tcgaaaatta
     1561 acggtcgagt tcgccggcaa tgatattcat ggctcccagg acggcgacgg catccgcgat
     1621 cagcgtgccc ttcacctggt cgtggaagct gctgaagatg gggaggcagg ggggacggac
     1681 ccggatgcgg tacgggttct tgccgccgtc gctcacgatg tagaagccca gctcgccatt
     1741 ggcggcttcg gtggcgctgt agacctcgcc caccggcatc tccatgccgt gcatgatgag
     1801 cttgaagtgg tggatgaggc tctccatccg ggtgtagacc ttctccttgg gcggcagcga
     1861 gatcttggga tcctccacgc agaccgggcc gggctcgagg cggtccagca cctgccggat
     1921 gatgcgcagg ctctggcgca tctcctcgac gcgcaccagg tagcggtcga acacgtcacc
     1981 cgtggtgccc acggggatgt cgaagtcgta ggtctcgtag ccgaggtagg gctgggcctt
     2041 gcgcagatcc tggggcacgc cggcggcgcg gaggcagggg cccgtgtagc cccagttcac
     2101 ggcatcttcg ggcccgatgg cgccgatgcc cttggtgcgg tcatgccaga tggggttgcg
     2161 ggtgagcagg cgctcgcact cgtcgatggc ggcctcgcac tccacgagga agcgctcggt
     2221 cagcggcacg aagccttcgg gaatgtcgcg gaacagcccg ccgatgcgcg tgaagctggt
     2281 gtgcaggcgc tggccggcgg ccatctcgaa gaggtcatag accgtctcgc gctgcttgaa
     2341 gaggtagagg aaggcggtga aggcgccgat gtcgacggcg ttcacgccca cgcacacgat
     2401 gtgatcggcc acgc
//
LOCUS       DATGWW010000158         3737 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_102162, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000158 DATGWW010000000
VERSION     DATGWW010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3737
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102162"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..2953
                     /locus_tag="VK150_02345"
     CDS             14..2953
                     /locus_tag="VK150_02345"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLP30172.1"
                     /translation="MGTLVIQFHLGRNVDNALNDVRTKIGQIRRDLPNNIEEPVISKF
                     DPAQLPVLSLVVKPDAKHAGMDDRELTRVAEDFLKRRIENIPGVGKVDPAGGSTREIL
                     VQIDPQKLESQGLALQAVKNALAGDTLAIPSGNLLQGSREVSVKVDAKAKSVADFNHV
                     IVGNKEGRPIELQEVATIVDGIKEKRSLARLSGKDVVALEIQRQTGGNTVAMVTAVEK
                     ALEELKPELQKQGVEVVTAKDNARFIIDNVEDVNVSIYVGGLLTVIIVFYFLKSWRST
                     LITSLTLPVSVISTFIVMRALDFTLNTMTLMGLSLAIGILIDDAIVVRENITRHAEMG
                     KDHVTAAREGTAEIGPAVIATTLSILAVFVPVAFMGGIVGKFFFPFGIVVAFAVAVSL
                     FVSFTLDPMLSAVWPDPEHEKSADAHVHYKGRNLIMRSVEAFGRMLDRWEQLYKTAIE
                     WALNHRKTVMGLGIGSFVLAMMLSGLLGNNFMPDFDRGDLQATFKTEPGSSLATTREK
                     ALALETAINAVPGVALTYTTIGTGLNGTVNNGGIYIKLKEGRRPDHIKIRRQIREAFR
                     SVPGVDAAVGPVNDWGMAYPIMVAVQAPDRDAVIQAVPLVKEALRSVPGAVDVTTSLD
                     SGKPELRLVIDRKAASDLGVSPALVAQMVRPLVDGEKVAKYEDEKGEQRDVRVRLADQ
                     QRRFTTQLADMTVQSTKDLGGGKHPLVRLNQVVRFEEGIAPAKLQRHDLMEEVEVDAN
                     FDGSTLGEVSALAAKKVADLKASGQLPEGVRVEFLGQTRDQKETAGYMGTSLLLAIFF
                     IYFVLASQFESFKLPIAIMASLPLSMVGMVLMLLVTGDSMSMMTSIGMILLMGLVTKN
                     AILLVDHALHLEREEGISRRQAIIRAGTVRLRPILMTSFAMIGGMLPLFLALGAGAEM
                     RAPMARAVVGGLITSTLLTLIVVPVFFEIIEEMSLAKAWAWLRHRLGRPGAEPVIEPP
                     LAEAPDA"
     gene            2946..3650
                     /locus_tag="VK150_02350"
     CDS             2946..3650
                     /locus_tag="VK150_02350"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HLP30173.1"
                     /translation="MPEPGFYAALESRRTVRDFLPDPVPQEVLDRALDAARLAPSSSN
                     LQPWEFVIIRDPKSRQAANAACLDQLSARTAPLLIALVTRRDLWKRNRDEILRIFESR
                     GPLRRSQAAYYKRIIPLVYTTGPFGILGPVKRLASRLLSWFKPTPNLMAREDLRIMAH
                     KSTALAAAQFMLALRAEGYDSCPMEGFDPWRAKALLDLPRGAEVNMFLAVGKRSETGV
                     WWDRVLMPRAWAVREI"
BASE COUNT          647 a         1306 c         1181 g          603 t
ORIGIN      
        1 cagccaggag ggcttgggca cgctcgtgat ccagttccac cttggccgca acgtggacaa
       61 cgccctcaac gacgtgcgca ccaagatcgg ccagattcgc cgcgatctcc cgaacaacat
      121 cgaggagccg gtcatctcca agttcgatcc ggcccagctg ccggtgctct ccctcgtggt
      181 gaaacccgac gccaagcacg cgggcatgga tgaccgcgag ctcacccgcg tcgccgagga
      241 cttcctcaag cgccgcatcg agaacatccc cggcgtcggc aaggtggatc ccgccggtgg
      301 cagcacccgc gagatcctcg tccagattga tccccagaag ctggaatccc agggcctcgc
      361 cctgcaggcc gtgaagaacg ccctggccgg cgacaccctc gccatcccca gcggcaacct
      421 gctgcagggc agccgcgaag tgtccgtgaa ggtggatgcc aaggccaagt ccgtcgccga
      481 cttcaaccat gtgatcgtag gcaacaagga agggcgtccc atcgagctgc aggaagtggc
      541 gacgatcgtg gacggcatca aggagaagcg cagcctggct cgcctcagcg gcaaggacgt
      601 ggtggctctg gaaatccagc ggcagaccgg cggcaacacc gtggccatgg tcacggccgt
      661 ggagaaggcc ctggaagagc tgaagcctga gctccagaag cagggtgtcg aggtggtcac
      721 ggccaaggac aacgcgcgtt tcatcatcga caacgtggag gacgtgaacg tctccatcta
      781 cgtgggcggc ctgctcacgg tgatcatcgt cttctacttc ctgaagagct ggcggtccac
      841 cctgatcacc agcctcacgc tgccggtgtc ggtgatctcg accttcatcg tcatgcgggc
      901 cctcgacttc acgctgaaca ccatgaccct catgggcctc agcctggcca tcggcatcct
      961 catcgacgac gccatcgtgg tccgcgagaa catcacgcgg cacgcggaaa tgggcaagga
     1021 ccacgtcacc gcggcccggg agggcaccgc cgagatcggc cccgccgtca tcgcgacgac
     1081 gttgtccatc ctggccgtgt tcgtgcccgt ggccttcatg ggcggcatcg tcggaaagtt
     1141 cttcttcccc ttcggcatcg tggtggcctt cgccgtcgcc gtgtcgctgt tcgtgagttt
     1201 caccctcgat cccatgctca gcgccgtctg gcctgatccc gagcacgaga agagtgctga
     1261 cgcccacgtg cactacaagg gccgcaacct catcatgcgc agcgtggagg ccttcggtcg
     1321 catgctcgac cgctgggagc agctctacaa gacggccatc gagtgggcct tgaaccaccg
     1381 gaagaccgtc atgggtctcg gcatcggcag ctttgtgctg gccatgatgc tgtcgggact
     1441 gctcggcaac aacttcatgc ccgatttcga ccggggcgac ctgcaggcga ccttcaagac
     1501 tgaaccaggc tccagcctcg ccaccacccg ggagaaagcc ctggccctgg aaaccgccat
     1561 caatgccgtg cccggtgtgg cgttgaccta caccaccatc ggcacagggc tcaacggcac
     1621 cgtcaacaac ggcggcatct acatcaagct caaggagggc cgccgccccg accacataaa
     1681 gatccgccgt cagatccgcg aagccttccg ctccgttccc ggggtggatg ccgcggtggg
     1741 tcccgtgaac gactggggca tggcctaccc catcatggtg gccgtgcagg ccccggaccg
     1801 cgacgcggtc atccaggccg tgcccctggt gaaagaggcc ctgaggagcg ttcccggcgc
     1861 cgtggatgtc accaccagcc tggacagtgg caagcccgaa ctccggctcg tcatcgaccg
     1921 caaagccgcc tccgacctgg gcgtgagccc ggccttggtg gcccagatgg tgcgccccct
     1981 cgtggatggc gagaaggtcg ccaaatacga ggacgagaag ggcgagcagc gcgatgttcg
     2041 cgtgcgcctc gccgaccagc agcgccgttt caccactcag ctcgcggaca tgaccgtgca
     2101 gagcacgaag gacctgggcg gcggcaagca cccgctggtg cgcctcaacc aggtggtgcg
     2161 cttcgaggag ggcatcgcgc ccgccaagct gcagcgccat gacctgatgg aggaagtgga
     2221 agtggatgcc aacttcgacg gctcgacgct gggcgaagtg agtgccctgg cggccaagaa
     2281 ggtggcggac ctgaaggcca gcggtcagct gccggaaggc gtccgtgtcg agttcctggg
     2341 tcagacccgc gaccagaagg agaccgccgg ctacatgggc acctcgctcc tgctggccat
     2401 cttcttcatc tacttcgtgc tggccagcca gttcgagagc ttcaagctgc ccatcgccat
     2461 catggccagc ctgccgctct ccatggtggg catggtgctc atgctgctcg tcaccggcga
     2521 ctccatgtcc atgatgacga gcatcggaat gatcctcctc atgggcctgg tgaccaagaa
     2581 cgccatcctg ctggtggacc acgcgctgca cttggaacgg gaggagggca tctcccgccg
     2641 ccaggccatc atccgggcgg gcaccgtgcg gctgcggccc atcctcatga ccagcttcgc
     2701 catgatcggc ggcatgctgc cgctcttcct ggcgctgggc gccggcgccg agatgcgcgc
     2761 ccccatggcc cgcgccgtgg tgggtggcct catcacctcc acgctgctga ccctcatcgt
     2821 ggtgccggtg ttcttcgaga tcatcgagga gatgagcctg gccaaggcct gggcttggct
     2881 ccgccaccgg ctgggccggc ccggggccga acccgtcatc gagccgcccc tggcggaggc
     2941 ccccgatgcc tgagcccggg ttctacgcgg cgctggaatc gcggcgcacg gtgcgggact
     3001 tccttcccga tcccgtgccc caggaggtgc tcgaccgggc cctcgacgcg gcccggctcg
     3061 cgcccagctc cagcaacctg cagccctggg agttcgtgat catccgcgat cccaagtcca
     3121 ggcaggcggc caacgccgcc tgcctggacc agctctccgc ccgcacggcg ccgctgctga
     3181 tcgccctcgt gacccgccgg gacctctgga agcggaaccg cgacgagatc ctgaggatct
     3241 tcgagagccg cggccccctg cgccgaagcc aggccgccta ctacaagcgc atcatccccc
     3301 tggtctacac caccggcccc ttcggcatcc tgggaccggt gaagcgcctc gccagccgcc
     3361 tgctctcctg gttcaagccc acgcccaatc tcatggcgcg ggaggacctc cgcatcatgg
     3421 cccacaagag cacggccctc gccgccgccc agttcatgct ggcgctccgg gccgaaggct
     3481 acgacagctg ccccatggag ggcttcgatc cctggcgggc caaggccctg ctggaccttc
     3541 cccggggcgc ggaagtgaac atgttcctcg ccgtgggcaa gcgcagcgag acgggcgtgt
     3601 ggtgggaccg cgtcctcatg ccccgagcct gggcggtgcg cgagatctga accctcgtct
     3661 attgggccgg gatgaggcaa tctggaaggt ccatggttgt cccgtcgccc gagttgaagg
     3721 atctgctgcg tctggct
//
LOCUS       DATGWW010000159         3175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_239689, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000159 DATGWW010000000
VERSION     DATGWW010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3175
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239689"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="VK150_02355"
     CDS             complement(<1..265)
                     /locus_tag="VK150_02355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30174.1"
                     /translation="MRGLRLIVPLLAVTAAYAQLPQGLDLQALKQAAAAQGVGAAVAD
                     AVPSKGPTAIQTSPSVEDTLRTRSEDEKLDEEIRAMKRREKGPT"
     gene            complement(389..1297)
                     /locus_tag="VK150_02360"
     CDS             complement(389..1297)
                     /locus_tag="VK150_02360"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MraY family glycosyltransferase"
                     /protein_id="HLP30175.1"
                     /translation="MILVQVSGRAPIQLHVVDWAAVHVMAATGLLDDHLNLRARYKAL
                     VGLGVAITLAVHMTHSLGQATEQVAFLGMALPNHPVILVPLLLCWFWAVPQAYNLIDG
                     INGLSLGFASLLLGVLGWNLGMRAPLMWGVLASVFLLNFPKARHFLGDCGALMMGTLF
                     AILGVKAFALTNPDLLLWVFAYPIVDVSLVVGIRRWKGLPLGEADRSHLHHWMMDRVK
                     GKPWIATPVLLVLAALPMLRATAIPGHAEASTLGIGILALLAFKAFKDRVTRTGLVTT
                     PAQVRREIPFMMPSVAREPSGSHPKL"
     gene            1846..>3175
                     /locus_tag="VK150_02365"
     CDS             1846..>3175
                     /locus_tag="VK150_02365"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: protein motif:HMM:NF008805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HLP30176.1"
                     /translation="MNALTFNPTTVSVDLGGTPISLETGRIAKQAHGAVVVRQGDTMV
                     LVAVCYGTPREGIDFFPLTVDYREPVLAAGKIPGGWFKREGRPTTKETLTSRLIDRPL
                     RPLFEEGYNGDTMITAQVLSYDGQHAPETLAMVGASAALIISEIPFVNPVGGVRVGRV
                     NGQLIVNPTVEQRADSDIDLLVAGTADALVMVECGAKEVLEADMVKALAFGHEQIKTL
                     VKLQKDLQAKVGKPKVAAAKAERNESLYKEVAAAFAEKLFAALTMKVKIESYKTIDLL
                     KKEAVAQFCAEKPELKKDLVACFDELKETLFRNAILKQGVRLDGRKFDQIRPLNIEVG
                     VLPAAHGSCLFTRGETQALVTATLGTIQNTQIIDGLEEEYKKKFYLHYNFPGYSVGEC
                     KPNRGPGRREIGHGMLAERSLMAMLPNPEDNPYTVRVVSDITESNGSSSMA"
BASE COUNT          623 a         1074 c          988 g          490 t
ORIGIN      
        1 gcgttggccc tttctcccgg cgcttcatgg cccggatctc ctcgtccagc ttctcgtctt
       61 cgctgcgggt ccggagggtg tcttccaccg agggagacgt ctggatcgca gtcgggccct
      121 tcgagggaac cgcgtcggcg acagccgcgc caacaccctg ggcagcggcg gcctgcttca
      181 gcgcctggag gtcgagtccc tgaggcaact gggcgtatgc ggccgtcaca gccaacaggg
      241 gaacgatcaa gcggagacca cgcatcatga ctgtcctatg gaatgagggc ttgctgaccg
      301 cgccggtcca ccgggacgga ggagccagcc ttcgttcgag tatgccccag ccccgggcca
      361 tctcccacgg gttcaggtcg cctggttatc agagctttgg gtgggacccc gagggctcac
      421 gggcgacgct gggcatcata aaggggatct cgcggcgcac ctgggccggt gtcgtcacca
      481 acccagtcct ggtcaccctg tccttaaagg ctttgaaggc caggagggcc aggattccga
      541 tgcccagcgt ggaggcttca gcgtggcccg gaatggccgt ggcgcgcagc atgggcaagg
      601 ccgccaggac gagcaggacg ggcgtggcga tccagggctt gcctttgacc cggtccatca
      661 tccagtggtg caggtggctg cgatccgctt cccccagagg caaccccttc cagcggcgga
      721 ttcccacgac caggctgaca tccacgatcg ggtaggcaaa cacccagagc agcaagtccg
      781 ggttggtcag tgcaaaagcc ttcacgccga ggatcgcgaa cagggtgccc atcatcaagg
      841 caccgcaatc gcccaggaag tgcctggctt tcgggaaatt caggaggaac accgaggcca
      901 gcacgcccca catgagcgga gcccgcatgc ccagattcca gccgaggacg ccgagcagga
      961 gggaagcgaa gcccagggac agcccgttga tgccatcgat gaggttgtag gcctggggca
     1021 cggcccagaa ccagcacagg aggagcggca cgagaatgac ggggtggttg ggcagggcca
     1081 tcccgaggaa ggccacttgc tccgtggcct ggcccaggga gtgggtcatg tggaccgcaa
     1141 gggtgatcgc gacccccagc cccacgagcg ccttgtacct cgcgcgcagg ttgagatgat
     1201 cgtccaggag gcccgtcgcc gccatgacat gcacggcagc ccagtccacc acgtgcagct
     1261 ggatgggggc ccgtccggag acctggacca ggatcaaggc gatccagagg gtcaatcccc
     1321 cagtgcgcgg cgtcggcctt acgtggcgct tccgcgtgga gtccgggcgg tccatgaagc
     1381 ccaacggcgc cacccagcgg atcaatcccc aggagagtgc gaggcccccg gcacagccga
     1441 tgactacctg gatccagtcg gaaaacacat gtccctcagt cttggttcaa agcgaatgga
     1501 gacgccggaa gcatctgggg ttgaatcctt gctaaggcaa ccatattctc agcaatccac
     1561 cacctaacca agcaaatatc ttgcgaatta tgtcattttt ataggatatc ccacccaaga
     1621 tctccgctcc ctggttgatt taccaacgga aaaaaaccgc ttcccctgct atgctcaggt
     1681 tgccgattcc acctgctccc cttcggcggc gacctctgca ggaagcccac ctccccctcc
     1741 tggctcagga ctcggcggac gggtttcatg gagcgatcgc aggagacccg ggccggtgcc
     1801 caggatctgg gggagccacg cgggcccgag ggccccggag agttcatgaa cgcgttgaca
     1861 ttcaacccca ccaccgtctc ggtggacctg ggtggtacgc ccatcagcct cgagaccggc
     1921 cgcatcgcca agcaggccca cggcgccgtg gtcgtccgcc agggcgacac catggtcctc
     1981 gtggccgtgt gctacggcac cccccgggaa ggcatcgact tcttccccct caccgtggac
     2041 taccgcgagc ccgtgctggc cgcgggcaag attcccggcg gctggttcaa gcgcgagggc
     2101 cgtcccacca ccaaggaaac cctcaccagc cgcctcatcg accgcccgct gcgccccctc
     2161 ttcgaagagg gctacaacgg cgacaccatg atcaccgccc aggtgctcag ctacgacggc
     2221 cagcacgccc ctgagaccct cgccatggtg ggcgcctccg cggccctcat catcagcgag
     2281 atccccttcg tcaaccccgt gggcggcgtc cgcgtgggtc gcgtcaacgg ccagctcatc
     2341 gtgaacccca ccgtcgagca gcgtgcggac agcgacatcg acctgctggt ggccggcact
     2401 gccgacgccc tggtgatggt ggagtgcggc gccaaggaag tgctggaagc cgacatggtg
     2461 aaggccctcg ccttcggcca tgagcagatc aagaccctgg tgaagctgca gaaggacctg
     2521 caggccaagg tgggcaagcc caaggtcgcc gccgccaagg ccgagcggaa tgaatccctc
     2581 tacaaggaag tggccgccgc cttcgccgag aagctcttcg ccgcgctgac catgaaggtg
     2641 aagatcgaga gctacaagac catcgatctc ctcaagaagg aagccgtcgc ccagttctgc
     2701 gcagagaagc cggagctgaa gaaggacctg gtcgcctgct tcgacgagct gaaggagacc
     2761 ctcttccgca acgccatcct caagcagggt gtgcgtctgg acggccgcaa gttcgaccag
     2821 atccgccccc tgaacatcga agtgggcgtg ctgcccgcgg cccacggcag ctgcctcttc
     2881 acccgcggtg aaacgcaggc gctggtcacc gccaccctgg gcaccatcca gaacacccag
     2941 atcattgacg gcctggaaga ggagtacaag aagaagttct acctccacta caacttcccc
     3001 ggatactccg tgggcgagtg caagcccaac cgcggccccg gccgccggga gatcgggcac
     3061 ggaatgctgg cggagcgctc cctcatggcg atgctcccca atcccgagga caacccgtac
     3121 accgtgcgcg tcgtctctga catcaccgag tccaacggat ccagctccat ggcca
//
LOCUS       DATGWW010000160         1993 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_187581, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000160 DATGWW010000000
VERSION     DATGWW010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187581"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..935
                     /locus_tag="VK150_02370"
     CDS             <1..935
                     /locus_tag="VK150_02370"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HLP30177.1"
                     /translation="TPGPGGLRMTEAGGPQGFRLRRRLARLLGERPMAYLLHLRPLEW
                     PIMTAHFLLGTLLAAGLDLPGKASLLGWFVFVALMNGGTLAINSAFDQDEGDIGYLKA
                     PPRPPEHLAAFSAVLLGASALLGFLLPLPFALINLGCVAMSVLYSVPPARLKARAGWD
                     LLINCLGFGLLTPLAGWALTARPFSPAILLAALGFAFLFATLYPMTQIYQVAEDSRRG
                     DRTLVIQVGVGRSLALALVAALIAHGCFAAAVLGMGRGPLFLLPSLLAWGVVLIPWLR
                     NWRTWTDARHEAGMYWGLAAWAVTDLSLLALLWP"
     gene            1071..1904
                     /locus_tag="VK150_02375"
     CDS             1071..1904
                     /locus_tag="VK150_02375"
                     /inference="COORDINATES: protein motif:HMM:NF012970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HLP30178.1"
                     /translation="MGFSKGARGLGFFLAGLAFLGAASPRSRGLSLKSASALVLDQST
                     GQTLLEKQAGAVVPIASLTKLMTAMVLLDAHLDPLETITITSEDKDTLRHSRSRLPVG
                     TRLPREQALLLALLASENRAAHALGRTFPGGLTAFVQAMNAKAQQLGLTGTRFEDPTG
                     LSSGNVATARDLARIMDAAYHYPEIRDFSTRPATTIQAGRRSIQFPNTNALVRSPRWD
                     IGLSKTGYIEEAGRCLVMQAMLANRPVLIILLDSWGKYSRLGDANRIKQWMEARLGSK
                     G"
BASE COUNT          287 a          726 c          630 g          350 t
ORIGIN      
        1 caacccctgg tccgggaggc ctgaggatga cggaagccgg gggtccgcag gggttccggc
       61 tgcgcaggcg cctcgcgcgc ctcctgggcg agcggcccat ggcctacctc ctccacctgc
      121 gccccttgga atggccgatc atgacggccc acttcctgct gggaaccctg ctggccgctg
      181 gcctggacct acccggcaag gcttcgctgc tcggctggtt cgtgttcgtg gccctgatga
      241 acggcggcac cctggccatc aacagcgcct tcgaccagga cgagggggac atcggctacc
      301 tgaaggcgcc gccccggccg cccgagcacc tggcggcctt ctcggcggtg ctgctgggcg
      361 catcggccct cctgggattc ctcctgcccc tgcctttcgc cctcatcaac ctgggctgtg
      421 tggccatgag cgtgctctat tccgtgcccc cggcacggct caaggcccgg gccggctggg
      481 atctcctcat caattgcctg ggcttcggcc tgctgacgcc cctcgcgggc tgggctctga
      541 ccgccaggcc attcagcccg gccatcctcc tggccgccct gggttttgcg ttcctcttcg
      601 ccaccctgta tcccatgacc cagatctacc aggtggccga ggacagccgc cggggcgacc
      661 gcaccctggt gatccaggtc ggggtgggtc gcagcctggc cctggccctg gtggcggccc
      721 tgatcgccca cggctgcttc gcggccgcgg tccttggcat gggccgcggg cccctgttcc
      781 tcctcccttc cctcctggcc tggggcgtcg tcctcatccc ctggctccgg aattggcgaa
      841 cctggacgga cgcccggcac gaagctggca tgtattgggg cctggccgcc tgggcggtga
      901 cagacctgag cctcctggcc ctcctttggc cctgaacaga gggatccttg gatccaagcc
      961 tttgaatccg ggcacttgaa gaaaggcgct tgagtagggg acccttgaat ccgatacact
     1021 ggtaaggcgt gacaacagtc gaaatcttca ggcacgtttc aggagcatgc atgggattca
     1081 gcaagggggc gcgaggtctg gggttctttc tggccgggct tgccttcctt ggggcggctt
     1141 cgcccaggtc ccgcggactc tccctgaaat ccgcctcagc cctggtcctg gaccaaagca
     1201 ccgggcaaac cctgctcgaa aagcaggctg gggcggtggt gcccatcgcg tcgctcacca
     1261 agctcatgac ggccatggtg ctgctggatg cccacctgga tccgctggaa accatcacga
     1321 ttacctctga agacaaggac accctgcgcc acagcaggtc ccgcctgccg gtgggcaccc
     1381 gcctgccgcg cgagcaggcg ctcctgctgg ccctcctggc ctcggaaaac cgggcggccc
     1441 acgcgctggg gcgcaccttc cccggcggac tgaccgcctt cgtccaggcc atgaacgcca
     1501 aggctcagca gttgggcctc acgggcaccc gcttcgaaga tccgaccggg ctctccagcg
     1561 gcaatgtggc caccgcccgg gatctggccc gcatcatgga cgcggcctac cactatcccg
     1621 agatccgcga tttcagcacc cgtccggcca ccaccatcca ggcgggccgg cgcagcatcc
     1681 agttcccgaa caccaatgcc ctggtgcgca gtccccgctg ggacatcggg ctttccaaga
     1741 ccggctacat cgaggaggcc ggccgctgcc tggtgatgca ggccatgctc gcgaaccggc
     1801 cggtgctcat catcctgctg gattcctggg gcaagtactc ccggctcggg gacgcgaacc
     1861 gcatcaagca gtggatggag gcccggctcg ggtccaaggg ctgatccgcc cgtgctgacg
     1921 ccggaggtca tgccgccctt ccccctccag tgggggttct cgacgcgcct cgatcccccg
     1981 gaactgctgc aga
//
LOCUS       DATGWW010000161         2805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_142308, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000161 DATGWW010000000
VERSION     DATGWW010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2805
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142308"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2463
                     /locus_tag="VK150_02380"
     CDS             <1..2463
                     /locus_tag="VK150_02380"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HLP30179.1"
                     /translation="LHRIELPTEKVVEVKIEVVTDGATLKAREENASRLLRNPDLSPQ
                     GKRAVFEARGEIFSVPAEKGYVINLTRTPGAAERYPSLSPDGKQVAYFSDRSGEYELC
                     VRPADGSGAERQVTRMGPGFRYRITWSPDGKRVVFVDQAMRINLCDLDTGKVQQVDKG
                     LFLFHEPLEGFRATWSPDSRWLAYPRDAANRNSVVVLYDTRNGQKHEVTSAYYNAGDP
                     AFDPEGKYLFLSTGQQFSPTYSDLDNTWIYSGTTRLAAIPLRKDVPSPIAPKNDADAD
                     KAEKGKDEKNGADKKNGADKKDGADKAEAPKPVEIDLEGLESRMVLLPPAAGYYMNVA
                     ATSGKLAYTRAAQLNPMGETKTTLYVYDFEEREEKAVLGDLDGAIISGDGKKALVNRK
                     TDYVLVDLKPDQKFDKKLPTGELRMTVEPQAEWQQIFNDAWRMERDYFYDPGMHGVDW
                     KAMRARYGKLLKDCVTREDVNFVLGDLIGELNASHAYRGGGDQEMPARLGVGLLGADF
                     ALENGAFRIKTILRGADWDAQVKGPLAQPGLKVKEGDYLLAVNRTPLDVRTDPWAAFQ
                     GLAGKTVLLTVNDKPSLDGAHDILVETVANDYQLRYWSWIEAKRKYVEKVSNGRLGYI
                     YVPDTGLGGQTDLVKQFRGQWDKAGLVVDERFNSGGQIPDRFVELLNRPVLNYWAVRD
                     GHDWQWPPVAHNGPSVMLINGWSGSGGDLFPHYFKKAGLGPLVGRRTWGGLIGISGSP
                     ALVDGGSVTVPTFGIFSKEGHWVVEGYGVDPDIEVIDDPALLAQGKDPQLDRAIQEVE
                     AAIKKAPPTATPKPAYPNRSGF"
     gene            complement(2519..>2805)
                     /locus_tag="VK150_02385"
     CDS             complement(2519..>2805)
                     /locus_tag="VK150_02385"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HLP30180.1"
                     /translation="GLDTPPDRPVTSLSAKVLVCHGADDPFVPAKEVAAFQDEMRQAK
                     ADYVFTAYAGAVHAFTQKEAGSDNAKGAAYNEAAHRRSWQHMKDLFQEIF"
BASE COUNT          509 a          988 c          908 g          400 t
ORIGIN      
        1 ctgcaccgca ttgagctccc caccgagaag gtggtggaag tgaagatcga agtcgtcacg
       61 gacggcgcca ccctgaaagc ccgcgaagag aacgccagcc gcctgctccg gaacccggac
      121 ctctcgcccc agggcaagcg cgcggtcttc gaggcccgcg gtgagatctt ctccgtgccc
      181 gccgagaagg gctacgtcat caacctcacg cgcacgcccg gcgccgccga gcgctatccc
      241 tcgctgtcgc ccgacggcaa gcaggtggcc tacttcagcg accgcagcgg cgagtatgag
      301 ctctgcgtcc ggcccgccga cggctccggc gccgagcgtc aggtcacccg catgggcccg
      361 ggcttccgct accgcatcac ctggtcgccg gacggcaagc gggtggtttt cgtggaccag
      421 gccatgcgga tcaacctctg cgacctggac accggcaagg tgcagcaggt ggacaagggc
      481 ctgttcctct tccacgagcc cctggagggc ttccgcgcca cctggtcgcc cgacagccgc
      541 tggctcgcct acccccgcga cgccgccaac cgcaacagcg tggtggtgct ctacgacact
      601 cggaacgggc agaagcacga agtgacctcc gcctactaca acgccgggga cccggccttc
      661 gatcccgagg gcaagtacct cttcctgtcc acgggccagc agttcagccc cacctacagc
      721 gacctggaca acacctggat ctattcgggt accacccgcc tcgccgcgat tccgctgcgc
      781 aaggacgtgc cctcgcccat cgcgccgaag aacgacgcgg acgccgacaa ggccgagaag
      841 ggcaaggacg agaagaacgg ggccgacaag aagaacgggg ctgacaagaa agatggcgcc
      901 gataaggccg aggcacccaa gcccgtggag atcgacctcg agggcctgga gtcgcgcatg
      961 gtgctgctgc cgccggccgc cggctactac atgaacgtgg ccgcaacctc aggcaagctc
     1021 gcctacaccc gcgccgcgca actcaacccc atgggcgaga ccaagaccac cctctacgtc
     1081 tacgacttcg aggaacgcga agagaaggcc gtgctgggag atctggacgg cgccatcatc
     1141 agcggcgacg gcaagaaggc cctggtgaac cgcaagaccg actacgtcct ggtggatctc
     1201 aagcctgacc agaaattcga caagaagctg cccaccggcg agctgcgcat gactgttgag
     1261 ccccaggccg agtggcagca gatcttcaac gacgcctggc gcatggagcg cgactacttc
     1321 tacgatcccg gcatgcacgg ggtggactgg aaggccatgc gggcccgcta cggcaagctg
     1381 ctcaaggact gcgtgacccg cgaggacgtg aacttcgtcc tcggcgatct catcggtgag
     1441 ctgaacgcct cccacgccta ccgcggcggc ggcgaccagg agatgccggc ccgtctgggc
     1501 gtgggcctgc tgggcgcgga tttcgcgctg gagaacggcg ccttccgcat caagactatc
     1561 ctgcgcggcg ccgactggga cgcgcaggtc aagggacccc tcgcccagcc tggcctcaag
     1621 gtgaaggaag gcgactacct gctggccgtc aaccgcaccc cgctggatgt ccgcaccgat
     1681 ccctgggcgg ctttccaggg cctggccggc aagaccgtgc tgctcaccgt caacgacaag
     1741 ccgagcctgg acggcgccca cgacatcctg gtggagaccg tcgccaacga ctaccagctg
     1801 cgctactggt cctggatcga ggcgaagcgg aagtacgtcg agaaggtctc caatggccgc
     1861 ctgggctaca tctacgtgcc cgacaccggc ctcggcggac agaccgacct cgtcaagcag
     1921 ttccgcggcc agtgggacaa ggccggcctg gtggtggacg agcgcttcaa cagcggcggc
     1981 cagatccccg accgcttcgt cgagctgctc aaccggccgg tcctgaacta ctgggcggtg
     2041 cgcgatgggc acgactggca gtggccgccg gttgcgcaca atgggccgtc ggtcatgctg
     2101 atcaacggct ggagcggctc gggcggcgat ctcttccccc actacttcaa gaaggcgggc
     2161 ctcggccccc tcgtcggccg ccgcacctgg ggcgggctca tcggcatcag cggctctccc
     2221 gcgctggtgg acggcggcag cgtcaccgtg cccaccttcg gcatcttctc caaggaaggc
     2281 cactgggtgg tggaaggcta cggcgtcgac cccgacatcg aggtcatcga cgatcccgcc
     2341 ctgctggccc agggcaagga tccccagctg gaccgggcca tccaggaagt cgaggccgcc
     2401 atcaagaagg cgccgccgac ggccacgccc aagcccgcct accccaaccg ctcgggcttc
     2461 tgatcgcccg ggaacgccgg aaacgccccg ccccggcggg gcgtttccat gtcacgggct
     2521 agaagatctc ctggaagaga tccttcatgt gctgccagct gcggcggtgc gccgcctcgt
     2581 tgtaggcggc gcccttcgcg ttgtcgctgc cggcctcctt ctgggtgaag gcgtgcaccg
     2641 cgccggcgta ggctgtgaac acgtagtccg ctttggcctg ccgcatctcg tcctggaagg
     2701 cggccacctc cttggcgggc acgaagggat catcggcccc atggcagacg aggaccttgg
     2761 cggaaaggga ggtcaccggc cgatcgggag gcgtgtccag tcccc
//
LOCUS       DATGWW010000162         1660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_324008, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000162 DATGWW010000000
VERSION     DATGWW010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324008"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            179..1507
                     /locus_tag="VK150_02390"
     CDS             179..1507
                     /locus_tag="VK150_02390"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HLP30181.1"
                     /translation="MDGDGNREIRRALLLASIPAMVQLLLKTGVGMVNKLMVGQLGEA
                     AIAGVGVSEQVIFLLLMVFAAVSTGVTTLAAQHLGAGDRERIRNVLGSGLVFGVLAAL
                     PITLALLGLAGDLLAWMGATPEIVAEGSTYLRIVSLAVPSIIASFILTAIFRAFSENK
                     VPMYASLGAILLDVSLSYYFLFVARKGIAGVACAALIARNAELVFLLAALQLRGRDYG
                     ISLRHALAFSRATFGKLVRIGWPVSVDMFIWQAGSMLAMLIVLRLGTIQSGVNELAKL
                     VPGWILTPVMGIGATATAFVGRDLGRGRFGDAQRQASETLRLALLITLAMSLAVCAAA
                     PFIPGFFRFTAEGTRYAAYAILFAALTQVTVFPNVICPSILRAGGDTKIIIPITAAGL
                     ALGLPAAYLLGITFHLGLLGVLAGQALGDLAKAIFFYARYRQGAWKQKLV"
BASE COUNT          226 a          594 c          545 g          295 t
ORIGIN      
        1 cgctgatccc gcgcggtgat cttctggagc atggatcgca aggcaccccc cggaagtgga
       61 tcttccaccc taaccgaacc tctggccgca gccacctccg ggtcgcccca gagggagaag
      121 ccgtcctccc ggccatggca ccatgggagg tgagggccct gacccgcagg cggacaggat
      181 ggacggcgac ggcaaccgcg agatccggag ggccctgctc ctggccagca ttccggccat
      241 ggtccagctg ctcctgaaga cgggcgtggg catggtcaac aagctgatgg tgggccagct
      301 gggggaggcc gccatcgctg gtgtgggcgt ctccgagcag gtgatcttcc tcctgctcat
      361 ggtgttcgcc gccgtgagca cgggcgtgac caccctcgcc gcgcagcacc tcggggccgg
      421 ggaccgggag cggatccgga acgtgctggg cagcggactg gtcttcggtg tcctcgccgc
      481 cctccccatc accctggccc ttctcggcct cgcgggcgac ctcctcgcct ggatgggcgc
      541 cacgccggag atcgtcgcgg agggctcgac ctacctgagg atcgtctcgc tggccgtgcc
      601 ctcgatcatc gccagcttca tcctcaccgc catcttccgg gccttctccg agaacaaggt
      661 tcccatgtac gcctcgctgg gggcgatcct gctggatgtc tcgctgtcct attacttcct
      721 gttcgtggcc aggaagggca tcgccggcgt ggcctgcgcc gctctcatcg cgcggaacgc
      781 ggagctggtg ttcctgctcg cggccctcca gttgcgggga cgggactacg gcatctccct
      841 ccgccacgcc ctcgcctttt cgcgggcgac gttcgggaag ctggtccgca tcggctggcc
      901 cgtgtccgtg gacatgttca tctggcaggc cggcagcatg ctcgccatgc tcatcgtgct
      961 gcgcctcggc accatccagt cgggcgtgaa cgagttggcc aagttggtgc ccgggtggat
     1021 cctcaccccg gtgatgggca tcggggccac ggccacggcc ttcgtgggac gcgacctcgg
     1081 acggggccgc ttcggggacg cccagcggca ggcgtcggag accctccggc tcgccctgct
     1141 gatcaccctg gcgatgtccc tcgcggtgtg cgcggcggcg cccttcatcc ccgggttctt
     1201 ccgcttcacg gctgagggca cccgttacgc ggcctacgcg atcctcttcg cggccctcac
     1261 gcaggtgacg gtgttcccca acgtcatctg cccgagcatc ctccgcgccg ggggcgacac
     1321 gaagatcatc attcccatca ccgccgccgg gctcgccctg ggcctgcccg cggcctacct
     1381 cctcggcatc accttccacc tgggcctgct cggtgtgctg gccggccagg ccctggggga
     1441 cctggccaag gccatcttct tctatgcccg ctaccggcag ggcgcctgga agcagaagct
     1501 ggtctgagcg gccgctagaa cacccgccag atcacgtgct tgtagggatc gctcaggaac
     1561 gccatgtcgc ggtcgaacac cacctggtag accgtgtcca ggttgtagaa cccgtaggac
     1621 gtcagcgctg gctgggtgga gatgaccccc gaggggctca
//
LOCUS       DATGWW010000163         1888 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_284616, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000163 DATGWW010000000
VERSION     DATGWW010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1888
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284616"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1282
                     /locus_tag="VK150_02395"
     CDS             <1..1282
                     /locus_tag="VK150_02395"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HLP30182.1"
                     /translation="PASPAGPSEVAGSRMARALGRIWFRTRRREGPSLPPGPCLILLN
                     HPNGLLDPLAAAALLDRRAGWLAKATLWKIAPLRPFLSAFHAIPVTRPKDGGATPESI
                     QQSFRKVHEVLARGGSVAMFPEGVSHSEPDLAPLKTGAARIALSCPTPLSLIPAGLVY
                     GDRASFRHSALLRLGEPIPFADLAGQGAEPAAVTALTARIRAGLQPLTLHDADARRLA
                     LAQDVAWLLAESPGSRVDLDRLRSRVRALVAHLAPLDEGGLADLEHRVRAAQAWLRAK
                     GLRPDQVGHPYAGSEVRRWLPGALMRLSAATLLLPLSLPFWPPYRLIGWLAGRFTDEG
                     DQVATLKLLGGILVHPLWAALLSVLSGLRWGGAAACLPPAALALVGLGLPTLERAAED
                     LQAIRGFLRRRDPAVPELLEARRQLLSAFPDLQA"
     gene            complement(1337..>1888)
                     /locus_tag="VK150_02400"
     CDS             complement(1337..>1888)
                     /locus_tag="VK150_02400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30183.1"
                     /translation="EATSTTFDATNVPTNGDLVITNPYTRYFGNALGGRAVLGAAGAP
                     VGPNFAQLAYTAGGAHTVTTPTGVVATAHAAGVVGAPFMYTLSPGLAPKVANAATAVT
                     DTTPKEGYFQFDQAGIAHAFLLNPANPVAVDLGQRQLVYWLATGLVVDPTQQSATLPI
                     AQPVQLPESMIFQAPARITILGH"
BASE COUNT          221 a          688 c          704 g          275 t
ORIGIN      
        1 gcccgccagc cccgccgggc cgtctgaggt ggccggcagc cggatggcgc gggccctggg
       61 gcggatctgg ttccgcaccc gccgccgaga gggaccgtcc ctgccgcccg gtccctgcct
      121 gatcctgctg aaccacccga acggactgct ggatccgctg gccgcggcgg ccctgctgga
      181 tcgccgggcc ggctggctgg ccaaggccac cctctggaag atcgcccccc tccgcccctt
      241 cctctcggcc ttccatgcca ttccggtgac ccggcccaag gatggcggcg ccacgcccga
      301 atccatccag cagagcttcc ggaaggtgca cgaagtgttg gcccggggcg ggagcgtggc
      361 catgttcccc gagggcgtga gccacagcga gccggacctc gcccccctca agacgggcgc
      421 cgcccgcatc gccctctcct gtccgacgcc cctgagcctg atcccggcgg ggctggtgta
      481 cggggatcgc gcatccttcc ggcacagcgc cctcctgcgg ctgggagagc ccatcccctt
      541 cgcggacctg gccgggcagg gggcagaacc cgccgcggtg acggccctga cggcccgcat
      601 ccgcgccgga ctccagcccc tgaccctcca cgacgccgat gcacgccgcc tggcgctggc
      661 ccaggacgtg gcctggctgc tggccgagag ccccggcagc cgcgtggacc tcgaccgcct
      721 gcggagccgg gtgcgcgccc tggtggccca cctggccccc ctcgacgagg gcgggctcgc
      781 cgacctggag catcgggtcc gggcggccca ggcctggctg agggccaagg ggctgcggcc
      841 cgaccaggtg ggccacccct atgctggatc cgaggtgcgc cgctggctcc ccggggccct
      901 gatgcgcttg tccgccgcga ccctcctgct gcccctgagc ctgccgttct ggccgcccta
      961 tcgtctcatc ggctggctgg cgggcaggtt caccgacgag ggggaccagg tcgccaccct
     1021 caagctgttg gggggcatcc tcgtccaccc gctctgggcg gccctgcttt cagtcctgtc
     1081 cggcctacgc tggggcggcg cggcggcctg cctgccgccg gcggcgctgg cgctggtggg
     1141 actcggcctg cccaccctcg aacgggccgc agaggatctg caggccatcc gaggcttcct
     1201 gcgccgtagg gaccccgccg tccccgagct gctggaggcg cgccggcagc tcctgtcagc
     1261 cttcccggac ctgcaggcct gagccggcac gaaaaaggcg gggccgaagc cccgcctttt
     1321 tcgtgtgctg gttggctcag tggccgagga tggtgatccg ggccggggcc tggaagatca
     1381 tggactcggg cagctggacg ggctgggcga tgggcagcgt ggcgctctgc tgcgtgggat
     1441 ccaccaccag gcccgtggcg agccagtaga cgagctggcg ctggcccagg tccacggcca
     1501 cggggttcgc cgggttcagg aggaacgcgt gggcgatgcc cgcctggtcg aactggaagt
     1561 agccttcctt gggggtggtg tcagtcaccg cggtggcggc gttggccacc ttgggtgcca
     1621 acccggggct cagggtgtac atgaagggcg cgcccaccac gccggcggca tgggccgtgg
     1681 cgacgacccc ggtgggggtg gtgacggtgt gcgcgccgcc cgcggtgtag gccagctggg
     1741 cgaagttcgg tcccacgggg gcgccggcgg cgccgaggac cgcccggccg cccagggcgt
     1801 taccgaagta gcgggtgtag gggttggtga tgaccaggtc gccgttggtg gggacgttgg
     1861 tggcgtcaaa cgtggtcgag gtggcctc
//
LOCUS       DATGWW010000164         1554 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_59501, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000164 DATGWW010000000
VERSION     DATGWW010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59501"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1049
                     /locus_tag="VK150_02405"
     CDS             <1..1049
                     /locus_tag="VK150_02405"
                     /inference="COORDINATES: protein motif:HMM:NF009379.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HLP30184.1"
                     /translation="VSGINKLFGAQQLKQQKASAGEVVALGRMDEVRTSEGLTPSAKV
                     ALDWPEPLQPMLALSLHTSKSGDDVKLSLALQKLCEEDASLQVEQNAETQERILWGQG
                     EVHLKCALDRLKSRFGLDVQHHPPLVPYRETFTKAAKVHGRHKHQTGGHGQFGDVWLE
                     IKPLPRGTGFQFEEKIVGGVVPKNFFGAVEHGIVDWMKRGPLGFPVVDIHVALVDGSY
                     HTVDSSDMAFKTAARIGMTEAAPVCHPVLLEPISEVHISVPSEYTPKAQRLVTGRRGG
                     QVLGFDAKPGWNGWDVVSAYIPQAEMSDVIVELRSLTMGVGSFTWAFHHLQELVGRDA
                     DKVVEARKQSKTTA"
     gene            1164..>1554
                     /locus_tag="VK150_02410"
     CDS             1164..>1554
                     /locus_tag="VK150_02410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30185.1"
                     /translation="MSLGARRLFPVILGLGPLLAGPPSPQFAAQQAMRFHQQMQMHMN
                     MQMQMQMGQARQAALNARRRQINEQAARMQNAPAAEEIAKPTGESWRIPVPAAGIRAE
                     DADVVVVSDGKWLIARSRDKGADLWSAA"
BASE COUNT          276 a          524 c          512 g          242 t
ORIGIN      
        1 gcgtgagcgg catcaacaag ctttttggcg ctcagcagct caagcagcag aaggccagcg
       61 ccggcgaagt ggtcgccctg ggccgcatgg acgaagtccg gaccagcgag ggcctcacgc
      121 cctccgccaa ggtggctctg gattggcccg agcccctcca gcccatgctc gccctcagcc
      181 tccacaccag caagagcggc gacgacgtga agctgtcgtt ggcgctgcag aagctctgcg
      241 aggaggacgc ctcgctgcag gtggagcaga acgccgagac ccaggaacgc atcctctggg
      301 gccagggcga ggtgcacctc aagtgcgcgc tggaccgcct caagagccgc ttcggcctgg
      361 atgtgcagca ccatccgccc ctggtcccct accgcgagac cttcacgaag gcggcgaagg
      421 tccacggccg ccacaagcac cagaccggcg gccacggcca gttcggcgac gtgtggctgg
      481 agatcaagcc gctgccgcgc ggcacgggct tccagttcga agagaagatc gtcggcggcg
      541 tggtgcccaa gaacttcttc ggcgcggtcg agcacggcat cgtggactgg atgaagcgcg
      601 ggcccctggg cttcccggtc gtggacatcc acgtggcctt ggtggacggc agctaccaca
      661 ccgtggacag ctccgacatg gccttcaaga ccgccgcccg catcggcatg accgaggcgg
      721 cgccggtctg ccaccccgtg ctgctggaac ccatcagcga ggtgcacatc agcgtgccca
      781 gcgagtacac gcccaaggcc cagcgcctgg tcaccggcag gcgtggcggc caggtcctcg
      841 gcttcgacgc caagcccggc tggaacggct gggacgtcgt gtcggcctac atcccccagg
      901 ccgagatgag cgacgtcatc gtggagctcc gcagcctcac catgggcgtc ggatccttca
      961 cctgggcctt ccaccacctg caggagctcg tgggccgcga cgccgacaag gtggtcgagg
     1021 cgcggaagca gagcaagaca accgcctagc tccattcgtt ttcatggcga tccgccaggg
     1081 agcggtgtcc tggcggatcg tcgtttgtgc gggcactgtc ccgtcctgcc ggccgatcct
     1141 cggccacctc ttggagttcc gtcatgtccc tcggtgccag acggctgttt cccgtcatcc
     1201 tcggccttgg accgctgctg gcgggtcctc cttcacccca gttcgcagcc caacaggcca
     1261 tgcggtttca tcagcaaatg cagatgcata tgaatatgca aatgcagatg caaatgggtc
     1321 aagcccgtca ggcggccctg aacgcccggc ggcgccagat caacgaacag gcagcccgga
     1381 tgcagaacgc tcccgccgcc gaggagattg cgaagcccac gggagaatcc tggcggatcc
     1441 ctgtgcctgc tgcgggtatc cgggccgaag atgcagatgt ggtggtggtc tctgacggga
     1501 aatggctgat cgcccgttcg agggacaagg gcgcggatct atggtccgcg gcgg
//
LOCUS       DATGWW010000165         3101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_324457, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000165 DATGWW010000000
VERSION     DATGWW010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3101
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324457"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            119..1165
                     /locus_tag="VK150_02415"
     CDS             119..1165
                     /locus_tag="VK150_02415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30186.1"
                     /translation="MKALILAAACSLTLLAQPALEEGLKDVREVHLRNVRKLTATGSN
                     AEAYWSRDGRKIIFQSTRDGYPCDQLYTMNADGSNQVRVSTGKGRVTCGWFLPGDGRI
                     VFASTHGAGPECPEGPPFTPGKYQWPVFQGYDLYVAKADGSEAKPFLPSPGYDAEATV
                     APNGKWLVFTSERSGDVDLWRADLDGTHLMRLTDGVGYDGGAVFSPDSKLIVWRTNYP
                     KGEAATAKYKDLLKQHLVEPMEMDIWVMNADGTGKRQVTKLPGAAFAPIFTPDGKGIV
                     FATNHHDQNGKGRSFDLFRIALDGTGLERITWTGVFNSFPHFSPDGKKLLWVSGRAPR
                     GSRQFDVCVAEWVP"
     gene            1162..1719
                     /locus_tag="VK150_02420"
     CDS             1162..1719
                     /locus_tag="VK150_02420"
                     /inference="COORDINATES: protein motif:HMM:TIGR01662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HLP30187.1"
                     /translation="MNLKPAIFLDRDGTLNEEVDYLSDPEQLVLIPGAAAAVARLNAK
                     GIPVVVVTNQSGIGRGKYDWQDFAAVMSRMGTLLALENAWIDAVYASPHHELGQGEYA
                     VTDHPDRKPNPGMLMRAAEEHDLDLARSWMIGDKDIDLDAGRRAGCRVALVRTGYGSQ
                     VDGAVADLVAADLPEALDRILAQWP"
     gene            1716..2456
                     /gene="sfsA"
                     /locus_tag="VK150_02425"
     CDS             1716..2456
                     /gene="sfsA"
                     /locus_tag="VK150_02425"
                     /inference="COORDINATES: protein motif:HMM:TIGR00230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HLP30188.1"
                     /translation="MILFQKADLVPGILLQRYKRFLADVRLDDGSVVTAHCTNTGTMK
                     TCWEPGDRVLLERALNPDRKLKYTWLAVERPGGWVGVETGVPNRVVAEAARRDVLPGL
                     SGLRNVRTEVRYGSEKSRIDVLAEDAAGRQVYIEVKNTTLKEGPWALFPDAVTERGTK
                     HLRELQAMLREGHRAAIALFVHRTDVDRFDAAREVDPVYAAELDRAAEAGVMVLPLAV
                     RLVTSPAGDGRWRLSWELPGLLPWVPRR"
     gene            2494..>3101
                     /locus_tag="VK150_02430"
     CDS             2494..>3101
                     /locus_tag="VK150_02430"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30189.1"
                     /translation="MSIAASDLMKTPLNAAHRALNAKMVDFGGWDMPVQYPAGIIAEH
                     EAVRTKAGLFDVSHMGEIRVKGPGALALVEHLTPNAVSKLVIGQVHYTAFLYENGTFV
                     DDLLVYREGEEEFLLVVNAGNSDKDFAWVQKHAPAFDCTVVNESPATGQIALQGPLAV
                     QILQPLTKTPLDPIGYYFFTHGEVAGIKCLISRTGYTGEDGF"
BASE COUNT          531 a         1061 c         1040 g          469 t
ORIGIN      
        1 gcctccaggg ctgagctgac acgcttgtcc atcatggcgg gaacctcgga atgtcccacc
       61 agtgtgccat ctctggcatt ctgctccagt tcctgtttgc acctgaaagg ggaaaaccat
      121 gaaggccctg atcctggcgg ctgcgtgctc cctcaccctc ctggcccagc cggcgctgga
      181 ggaaggcttg aaggacgtcc gggaggtcca cctccggaac gtgaggaagc tcaccgccac
      241 cggctccaac gccgaggcct actggtccag ggacggccgg aagatcatct tccagagcac
      301 ccgggacggg tatccctgcg accagctcta caccatgaac gccgatggct cgaaccaggt
      361 ccgggtgagc accggcaagg ggcgcgtgac ctgcggctgg ttcctgccgg gcgatggccg
      421 gatcgttttc gccagcaccc acggcgccgg cccggagtgc cccgaagggc cgcccttcac
      481 cccgggcaaa taccagtggc ccgtgttcca gggctacgac ctctacgtgg ccaaggcgga
      541 tggcagcgaa gcgaagccct tcctgccatc gccggggtac gacgcggagg ccaccgtggc
      601 ccccaacggg aagtggctgg tcttcaccag cgagcgcagc ggggacgtgg acctctggcg
      661 ggccgacctg gacggcacac acctgatgcg cctgacggac ggcgtgggct acgacggcgg
      721 cgcggtgttc agccccgatt cgaagctcat cgtgtggcgc accaactacc ccaagggtga
      781 ggcggccacg gcgaagtaca aggatcttct caagcagcac ctcgtcgagc cgatggagat
      841 ggacatctgg gtgatgaacg ccgacggcac cggcaagcgc caggtcacga agctgcctgg
      901 cgcggctttc gcgcccatct tcacgccgga cggaaagggc atcgtcttcg cgaccaacca
      961 ccacgaccag aacggcaagg gccggagctt cgacctcttc cgcatcgccc tggacggcac
     1021 cggcctcgag cgcatcacct ggaccggagt cttcaattcc ttcccccact tcagccccga
     1081 cggtaagaag ctcctctggg tgagcggacg ggccccgcgc ggatcgcgcc aattcgacgt
     1141 ctgcgtcgcg gagtgggtgc cttgaatctc aaacccgcca tcttcctgga ccgcgacggc
     1201 accctcaacg aggaggtgga ctacctgtcc gatcccgagc agctggtgct gattcccggg
     1261 gccgcggcgg ccgtggcccg gctcaacgcc aaggggatcc ccgtggtggt ggtgaccaac
     1321 cagagcggca tcggccgggg caagtacgac tggcaggatt tcgccgcggt gatgagccgg
     1381 atgggcaccc tgctggccct ggagaatgcc tggatcgacg cggtctacgc ctccccgcac
     1441 cacgagctgg ggcaggggga gtatgccgtc accgaccatc cggaccggaa gccgaatccc
     1501 ggcatgctga tgcgggccgc ggaggagcac gacctcgacc ttgcgcgctc ctggatgatc
     1561 ggcgacaagg acatcgacct ggacgccggg cgccgcgccg gatgccgcgt ggccctggtg
     1621 cggacggggt acggatcgca agtcgacggt gcggtcgccg acctggtggc tgcggacctc
     1681 cccgaggcgc tggatcggat cctggcccag tggccatgat cctcttccag aaggcggacc
     1741 tggtcccggg catcctcctg cagcggtaca agcgcttcct ggcggacgtg cggctcgacg
     1801 atggcagcgt cgtcactgcc cactgcacca acacgggcac catgaagacc tgttgggaac
     1861 ccggcgaccg ggtgctgctg gagcgggccc tgaacccgga tcgcaagctg aagtacacct
     1921 ggctggccgt cgagcggccc ggcggctggg tgggggtgga gacaggcgtg cccaaccgcg
     1981 tggtggctga ggccgcccgg cgggatgtgc tcccgggcct gtccggtctg cggaacgtca
     2041 ggaccgaggt ccggtacggt tcggagaaaa gccggataga cgtcctggcc gaggacgccg
     2101 cgggccgcca ggtctacatc gaggtgaaga acaccaccct gaaggaaggt ccctgggcgc
     2161 tcttcccgga cgcggtcacg gaacgcggaa ccaagcacct gcgggagctg caggccatgc
     2221 tgcgcgaggg ccaccgggcc gccatcgccc tgttcgtcca ccgcacggat gtggatcgct
     2281 tcgacgccgc gcgggaggtg gatccagtct acgccgcgga actggaccgc gccgcagagg
     2341 ctggcgtgat ggtgctgccc ctcgctgtgc gcctcgtcac aagcccggcg ggtgatggcc
     2401 gctggcggct gtcctgggaa ctcccgggcc ttctgccctg ggttccgcgg cgatagactg
     2461 gtggctcacg ccagccccaa tgccggagac cccatgtcca ttgccgcgtc cgacctgatg
     2521 aagacccccc tcaacgccgc gcaccgggcg ttgaacgcca agatggtgga tttcgggggc
     2581 tgggacatgc cggtgcagta ccccgccggg atcatcgctg agcacgaagc cgtccgcacc
     2641 aaggccggcc tcttcgatgt cagtcacatg ggcgagatcc gcgtgaaggg ccccggcgcc
     2701 ctggcgctgg tggagcacct cacgccgaac gcggtctcga agctggtcat tggccaggtc
     2761 cactacaccg ccttcctcta cgagaacggc accttcgtgg acgacctgct ggtctaccgg
     2821 gagggcgagg aggagttcct gctggtggtg aacgccggca attccgacaa ggacttcgcc
     2881 tgggtgcaga agcacgcccc ggccttcgac tgcacggtgg tgaacgaaag ccccgccacc
     2941 ggccagatcg cgctccaggg ccccctcgcg gtccagattc tccagcccct caccaagacc
     3001 ccgctggatc ccatcggcta ctacttcttc acccacggcg aggtcgccgg gatcaagtgc
     3061 ctcatcagcc gcacaggcta caccggcgag gacggcttcg a
//
LOCUS       DATGWW010000166         1626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_187961, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000166 DATGWW010000000
VERSION     DATGWW010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187961"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1626
                     /locus_tag="VK150_02435"
     CDS             <1..>1626
                     /locus_tag="VK150_02435"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLP30190.1"
                     /translation="EFILVAPENVVVDESLLSTSLDVFASGGEDVQAVTWAAWLADTA
                     GNIQDEFLTESRPMADFRAALAAHPALKDPIQMLSFLVMRKSFLEKIRDILQAIPLKE
                     PQDISEQLFDSFWLKQGDSVRRTSLPMLIIYPPSATAAIERPGRERAREEADPSGDAD
                     KSAMREALLAYADKLEGDPYDRASILGSADLLKRMGDGGAALSMLNHYLGKNAADAEV
                     QGLVRDWSAKAGSQAAAVPSAPAGSARASANGMPASPMHSGSVAVASVQGTSSARSVA
                     TGEPAAWSAAPGNPLAGEKVYATYAEAKPLVETVPGWLLDGQEEFLFNMAKAVPEGGH
                     ILEMGADRGRSTAAMALACSGSGKRIFSIDTFCGNDGIMGKTHDFQHEWHANLERLGV
                     DRHCEPLKGFTFDVIPTWSGRPMLDFVFIDASHEYIDVLKDFKLIYPYVKPGGWIAFH
                     DVEPNWPGPWRVWLERAVPLLAEHKQVATLACGRKVTGRPWEYGEKRLGFSFATNWID
                     HLARTIQGGEALLDTMRASMAFGSAPEADRARIL"
BASE COUNT          277 a          543 c          517 g          289 t
ORIGIN      
        1 gagttcatcc tcgtggcacc ggaaaatgtg gtcgtggacg aatccctgct cagcacttcc
       61 ctggacgttt tcgcctccgg aggcgaggac gtccaggcgg tgacttgggc cgcctggctg
      121 gccgacacgg cgggcaatat ccaggacgag tttctgacgg aaagccgccc gatggctgac
      181 ttccgagcgg ctctggccgc ccatcccgcg ctgaaggacc ccatccagat gctgtccttc
      241 ctcgtgatgc ggaagtcctt ccttgagaaa atccgcgaca tcctgcaggc cattcctttg
      301 aaggagccgc aggacatctc cgagcagctc ttcgactcct tttggctgaa acagggcgac
      361 agcgtgcgca ggacgtcgct tcccatgctc atcatttatc cgccctccgc caccgcggct
      421 atcgagcggc cggggcgcga gcgggcccgc gaggaggcgg atccgtccgg cgacgccgac
      481 aaatccgcca tgcgggaagc cctgctggcc tatgccgata aactggaagg ggatccttac
      541 gaccgtgcct ccatcctcgg cagcgccgac ctgctcaagc ggatggggga cgggggagcc
      601 gccctgtcca tgctgaacca ttatctcggg aagaacgccg cggacgcgga ggtccagggg
      661 ctggtccggg attggagcgc caaagccggc tcccaagccg ccgctgtccc ttccgcgccc
      721 gccggatccg cgcgggcttc cgccaacggc atgcccgcct cgcccatgca ctctgggagc
      781 gtggcagtgg cctcggtcca agggacctcg tccgcccgct ccgttgcgac cggggaaccc
      841 gcggcctggt ccgcggcgcc cggtaatccg ttagccggcg agaaggtgta cgccacctac
      901 gcggaagcca aacccctggt ggagacggtt ccgggctggc tactggacgg gcaggaggaa
      961 ttcctcttca acatggccaa ggcagtcccc gagggaggcc atatcctcga gatgggcgcg
     1021 gataggggac ggtccaccgc cgccatggcc ctcgcctgtt cgggcagcgg caagcgcatc
     1081 ttctccatcg acacgttctg cggtaacgac gggatcatgg gcaagactca tgacttccag
     1141 catgagtggc atgccaattt ggagcgcctg ggcgtggaca ggcattgcga gcccctcaag
     1201 ggcttcacct tcgacgtgat tcccacctgg tccggtcgcc cgatgcttga cttcgtgttc
     1261 atcgacgcgt cccacgagta tatcgacgtg ctcaaggact tcaagctgat ctatccttac
     1321 gtgaagccgg gcggctggat cgccttccac gacgtggagc cgaactggcc cggtccttgg
     1381 cgcgtctggc tggagcgggc tgtgccgctt ctcgccgagc acaaacaggt ggctaccctc
     1441 gcttgcggcc gcaaggtgac tggacggcca tgggaatatg gggagaaacg cctcggtttc
     1501 tcctttgcca ccaattggat cgaccacctc gcccgtacaa tccagggcgg cgaggcgctg
     1561 ttggacacca tgcgcgcgag catggccttc ggctcggctc ccgaagcgga ccgtgcccgc
     1621 atcctc
//
LOCUS       DATGWW010000167         2115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_60195, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000167 DATGWW010000000
VERSION     DATGWW010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60195"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1143
                     /locus_tag="VK150_02440"
     CDS             <1..1143
                     /locus_tag="VK150_02440"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HLP30191.1"
                     /translation="GPAPPQKPLSPAAQALLDRAFADLDPARPLVDLHVHAIGLGQDG
                     DGTYVNPAKLSGKHPFKRLETGLYLKATGVKGLARFDQDYLEILAARAAAFPRPPQVH
                     LLAMDRAYRTDGTADPIRTEFHVPNAYVLAAAARHPDLFVPVASIHPARPDAIQELEA
                     CAAKGVRLLKWLPNAQAIDPADPRWDAFYRRMNELGVVLLTHAGEEKAVAVKGAQALG
                     NPLRLRRPLDLGVTVIVAHCASLGRNVDLDHPGTTATNFDLFLRLMAEPAYRGRLYGD
                     LSAITQVNRLPRPLQTLLARPEFDGRLLNGSDYPLPGVDLVIWTRRLAQLGLITAGER
                     RALNEIWKRNPLLFDFVLKRTLKDPKTGRHWPASIFQRGPVDLQPQ"
     gene            complement(1137..>2115)
                     /gene="glp"
                     /locus_tag="VK150_02445"
     CDS             complement(1137..>2115)
                     /gene="glp"
                     /locus_tag="VK150_02445"
                     /inference="COORDINATES: protein motif:HMM:NF045515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HLP30192.1"
                     /translation="PTAAVGPGEALRIMTGAPVPAGADTVVPVEDTRRGEAWMEVQKP
                     VGRGVHIRHAGEDLAIGQKLVAAGQGLRPGDLGVLAAAGIAEVPVHRRVRVDVLTTGD
                     ELVDVSEQPGPGRIRDANIHALCAQVAAAGAVSVPFPRVPDDPGTLGRTLRQALEADV
                     VLTTGGISVGDYDFMKGLLEELGARRVFWKVAQKPGGPLGFWLLDGKPVFGIPGNPVA
                     AMLMVEEYVRPALRKLMGFGLLHRPVETAVLEGGWSGRAVDRRTTFLRVVARREGGQL
                     RARSTGPQGSAILSSMLIANALAVLPEGVSRVEDGGEVTLHLTEMAEDH"
BASE COUNT          307 a          856 c          676 g          276 t
ORIGIN      
        1 ggccctgcgc ctccccaaaa gcccctgtcc cccgccgccc aggccctgct cgaccgcgcc
       61 ttcgcggacc tggatccggc ccgccccctg gtggacctcc acgtccatgc catcggcctg
      121 ggccaggacg gcgacggaac ctatgtgaac ccggcgaagc tcagcgggaa gcaccccttc
      181 aagcgcctgg agacggggct ctacctgaag gccacgggcg tgaagggcct cgcccgcttc
      241 gaccaggact acctcgagat cctggccgcg cgcgccgcgg ccttcccccg ccctccgcag
      301 gtgcacctgc tggccatgga ccgggcctac cgcaccgacg gcacggccga tccaatccgc
      361 accgagttcc atgtgccgaa tgcgtacgtg ctggcggccg ccgcccgtca cccggacctt
      421 ttcgtgcccg tggcctccat ccaccccgcc cggcccgacg ccatccagga actggaagcc
      481 tgcgcagcca aaggcgtccg cctgctgaag tggctgccca acgcccaggc catcgatccg
      541 gccgacccgc gctgggacgc cttctaccgc cgcatgaacg aactcggcgt ggtcctgctc
      601 acgcacgccg gggaagagaa ggccgtggcc gtgaagggcg cgcaggccct gggcaacccc
      661 ctgcggctcc ggcggccgct ggacctcggc gtcaccgtga tcgtggcgca ctgcgccagc
      721 ctcggccgca acgtcgacct ggaccacccc gggacgaccg ccaccaactt cgacctcttc
      781 cttcgcctga tggccgaacc cgcctaccgg ggccggctct acggcgacct ttccgccatc
      841 acccaggtca accgcctgcc ccggcccctg cagacgctcc tggcccgccc cgagttcgac
      901 ggccgcctgc tcaacggcag cgactacccc ctgcccggcg tggacctggt catctggacc
      961 cggcggctgg cacagctggg cctgatcacc gccggcgagc ggagggccct caacgagatc
     1021 tggaagcgca atccgctgct cttcgacttc gtgctgaagc gcaccttgaa ggatccgaag
     1081 accggccgcc actggccggc ctcgatcttc cagcgcggtc cggtggatct ccagcctcag
     1141 tgatcttccg ccatctcggt gaggtgcagc gtcacctcgc cgccgtcctc cacccgcgac
     1201 acgccctcgg ggagcaccgc cagggcgttg gcgatgagca tggaggagag gatcgccgat
     1261 ccctggggcc cggtgctgcg cgccctcaac tggccgccct cccgccgggc caccacccgc
     1321 aggaaggtgg tgcggcggtc caccgcccgc cccgaccagc ccccttccag cacggccgtt
     1381 tccaccggcc ggtgcaggag gccaaagccc atcagcttcc gcagggcggg acggacgtat
     1441 tcctcgacca tcagcatggc cgccacggga ttgcccggaa tgccgaagac cggcttgccg
     1501 tccagcagcc agaagccgag cgggccgccg ggcttctgcg ccaccttcca gaagacccgc
     1561 cgggcgccga gctcctccag caggcccttc atgaaatcgt agtcgcccac ggagatgccg
     1621 ccggtggtga gcaccacgtc ggcctccagc gcctggcgga gcgtccgccc cagcgtgccg
     1681 gggtcatcgg gaacgcgcgg aaaggggacg gacacagcgc cggcggcggc cacctgcgca
     1741 cagagcgcat ggatgttggc gtcgcggatg cgccccggcc ccggctgctc ggagacgtcc
     1801 accagctcat cgcccgtggt gagcacgtcc acgcggaccc ggcgatgcac gggcacctcg
     1861 gcgatgcccg ccgccgccag cacgcccagg tcgccgggcc ggagcccctg cccggccgcc
     1921 accagcttct ggccgatggc cagatcctcg cccgcgtgcc ggatgtggac gccacggccc
     1981 accggtttct ggacctccat ccaggcctcg ccacggcggg tgtcctccac gggcaccacc
     2041 gtgtccgcgc cggcgggcac cggcgcgccg gtcatgatgc gcagggcctc gccgggcccc
     2101 acggcggcgg tgggc
//
LOCUS       DATGWW010000168         5395 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_102995, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000168 DATGWW010000000
VERSION     DATGWW010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5395
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102995"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..408
                     /locus_tag="VK150_02450"
     CDS             16..408
                     /locus_tag="VK150_02450"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLP30193.1"
                     /translation="MAQEAFVILMQREERVEHPTAFLYGTVRTLSLTERRPMKNQNLS
                     LEAVAEPGLAGGADDLVLNQEVRERMRLLSPTFREALWLFVVEGLSIREIADILGIPE
                     ATVKTRIHRAKAQLKDQLNPSGGVHVLV"
     gene            395..913
                     /locus_tag="VK150_02455"
     CDS             395..913
                     /locus_tag="VK150_02455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30194.1"
                     /translation="MSWSDPARRFEPAEDVQLRAELRDLLGLGPVAASRPAEPTPELT
                     ALADDLRREAQRRSRTERKRPTWGLLATAALPLLAALVGLGTWGLQQKHRADGLVAQA
                     QRQEQELTRLAALHASELARERQVKEEVQQQLQLVAKKGGRKGEPYLVIPVEKPLKTM
                     GDDYQRVKQNPQ"
     gene            960..1247
                     /locus_tag="VK150_02460"
     CDS             960..1247
                     /locus_tag="VK150_02460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30195.1"
                     /translation="MASNPLLLLILLLSALATVLAGMSVFSNSRPPDPRLNSLVNDLD
                     DIKGMLAQLQKSVMQTERKLEKEVQAGRSESRELVEKLAEVVDKRLKELVG"
     gene            complement(1536..3491)
                     /locus_tag="VK150_02465"
     CDS             complement(1536..3491)
                     /locus_tag="VK150_02465"
                     /inference="COORDINATES: protein motif:HMM:NF025011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-associated domain-containing protein"
                     /protein_id="HLP30196.1"
                     /translation="MRHWTILCTRVPMPHTHFQLLSNCSDEQLRTICERRHLPIPIWS
                     EDGPEGRMRLLKTMVFHLEDHKRLSDTLADLDSGFLVALKHLASEGTLPCPEALAVLR
                     DLGLILPTGTPAPGWAMAERVADALEDFDDGALTFQAPTDVKLKDAEPFRFSLALTSV
                     LLRCVAGLRVLKGGLPAKKELGQLMQRNAMLQEEQDANLLFTLLHRLGLLWNRDGRVE
                     TLLPAVTSHPPRWVAERAFASLLEHDLKAWGMPPAEDRHFLMQHLLERRGQALAVQPF
                     LAFLKTLHPLDEERTRAVFLPFLRRMGIIQADESLAHLRLSDHGEALAHEYLLRDLKG
                     TAAHWQPLEQDQPMIMQPTLELLTPLLQSPHRLLQLAQLAEVESLDAMGSFRVSHATL
                     VRALDAGVPLEELGQRLGAATQTLPQPLLQLLEDLSRRVGEVEVHQGVRLVRARTAHL
                     ADELKLRPELAPLKLGSLSDTVLEVRGDGNAHALLKQAGFMPKPGRFLALSVDSDEKL
                     YLWALAALAFVDEKGMNHHLEPVQQMVRSALQRLHDEDPALYQEVQRRIPMLHLGGED
                     QLAEEVQRILEYAAGHTLMVELTYLPPAAHRTQLRRVSPRTIQEDHLLAFCHLHQEEM
                     AFRLTRIQGVKLLNERGWTPANHSQAG"
     gene            complement(3565..4413)
                     /locus_tag="VK150_02470"
     CDS             complement(3565..4413)
                     /locus_tag="VK150_02470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30197.1"
                     /translation="MTPMKQFLSATAFLGLTLLLACGGGGGGSTPPPPPTAPAISAQP
                     TDQSVQAGATATFTVTATGTAPLSYQWKKGGAAITGATSASYTTPVTVVGDSGSSFTV
                     TVTNSAGSVTSSAAVLTVTPVATTLAYTDPTTGTYQLKKNGTLSNSTHLVLDLVGPAA
                     TTGTGVTATFSADTTKVTWVNVAAADPANTFVQNGDAFTLGAAPQILKGKVTGNVLQV
                     TAAQKGTASPVALNVPLLRIALDLKAAQGTGAITFTADSTKCQVVDGTGTIGAITVTV
                     GTLAAQ"
     gene            complement(4425..>5395)
                     /locus_tag="VK150_02475"
     CDS             complement(4425..>5395)
                     /locus_tag="VK150_02475"
                     /inference="COORDINATES: protein motif:HMM:NF025264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="proprotein convertase P-domain-containing
                     protein"
                     /protein_id="HLP30198.1"
                     /translation="AQKAIANITVAVPVPVTFSTQPQSVATAVGHKATFTVAASGSGV
                     LTYQWKKGGAVIAGATSASYTTPTLALVDSGSVYTCEVTGKAGTVASNPATLTVQALG
                     TATTVSSTTVTAIPDATQPGGPGTAVTPGAAVEIPFTVAGVTGNVGEVTMAVYLSHTW
                     VGDLDITLVAPDASTVTLAHAINGGNAGSAGGSALGTSCGTYATFSDLGTVSIQTQTS
                     GNLPLTGIYIPYQALDRFNGKSPNGTWKLRIQDFGPVDTGTFNCGVLTVKPLAGQSLD
                     LNADGTTDLRDLLYFSKFYGTTTATCDLNSDGTVNDADLALLLAGL"
BASE COUNT          821 a         1705 c         2029 g          840 t
ORIGIN      
        1 tactttcctt aggatatcgc ccaggaggcc ttcgtcatcc tcatgcagcg ggaggagcgg
       61 gtggagcacc ccacggcctt cctgtatggc accgtccgaa ccctgtctct caccgagcgc
      121 cgtcccatga agaaccagaa cctcagcctg gaagccgtcg ccgaacccgg cctggccggc
      181 ggggccgacg acctggtgct gaaccaggag gtccgggagc gcatgcggct gctctcgccc
      241 accttccgtg aagccctttg gctcttcgtg gtcgagggcc tctcgatccg ggagatcgcc
      301 gacatcctcg gcattcccga agccaccgtg aagacccgca tccaccgggc gaaggcccag
      361 ctgaaagatc agctcaatcc ctcaggaggc gtgcatgtcc tggtctgatc ccgctcggcg
      421 tttcgagccc gccgaagatg tccagctgag ggcggagctc cgcgacctgc tgggcctcgg
      481 gcccgtggcc gccagccggc ccgccgaacc cacgcccgag ctgacggccc tggccgacga
      541 cctccgccgg gaggcccagc gccgcagccg caccgagcgg aagcgcccca cctggggcct
      601 gctcgccact gcggccctgc cgctcctcgc cgccctggtg ggtctgggca cctggggcct
      661 ccagcagaag caccgggccg acgggctggt cgcccaggcc cagcgccagg agcaggagct
      721 cacgcgcctc gccgccctcc acgccagtga gctggcccgg gaacggcaag taaaagaaga
      781 agtccagcaa cagcttcagt tggtcgccaa gaaggggggc cggaagggcg agccctacct
      841 ggtgatcccc gtggaaaaac ccctcaagac catgggcgac gactaccagc gggtgaagca
      901 gaatccccaa tagccccggg tcggcatggt cctggcaata tcgagggcaa ggtgtgccca
      961 tggccagcaa tccccttctt ctcctgatcc tcctgctctc cgccctcgcc acggtgctgg
     1021 cgggcatgag cgtcttcagc aacagccgcc cccccgaccc ccggctcaac tccctggtca
     1081 atgacttgga cgacatcaag gggatgctcg cgcagctcca gaaatccgtt atgcagaccg
     1141 agcggaagct cgaaaaggaa gtccaggccg gccgaagcga aagccgcgaa ctcgtcgaaa
     1201 aactggccga agtcgtggac aagcgcctga aggaactggt cggctagcca cccctccgat
     1261 gagatcgaac aagacaaagc ccggctcggc cgggctttgt cgcgggggtc cgggggtgtg
     1321 cgcgcagcgc ggaacctccg gagagaaaag acaaagcccg gctcggccgg gctttgtcgc
     1381 gggggcccgg gggtgttcgc gaagcgagga acccccggag aaaagacaaa gcccggctcg
     1441 gccgggcttt ctcgcgaggg tctcgggggt atgcgcgcag cgcgacccta gctccctgcc
     1501 acgcatgcgt ggcagggagg acccccagac agcattcacc ccgcctggct gtggttcgcc
     1561 ggcgtccagc cccgctcgtt gagcagcttc acgccctgaa tgcgggtgag gcggaaggcc
     1621 atctcctcct ggtggaggtg gcagaaggcc agcaggtggt cctcctggat ggtgcggggc
     1681 gacacccgcc gcagctgcgt gcggtgcgcc gccgggggca ggtaggtgag ctccaccatg
     1741 agcgtgtggc ccgcggcgta ttcgaggatg cgctgcacct cttcggccag ctggtcctcg
     1801 ccgcccaggt gcagcatggg gatgcggcgt tgcacttcct gatagagggc cgggtcctcg
     1861 tcgtggaggc gctgcagggc cgagcgcacc atttgctgca cgggctccag gtggtggttc
     1921 atgcccttct cgtccacgaa ggccagggcc gccagggccc agaggtagag cttctcgtcg
     1981 gaatccacgc tcagggccag gaagcggcct ggcttgggca tgaagcccgc ctgcttgagc
     2041 agggcgtggg cgttgccgtc gccgcgcact tccagcaccg tgtccgacag cgagcccagc
     2101 ttgagcggcg ccagctcggg ccgcagcttc agctcgtcgg ccaggtgcgc cgtgcgagcc
     2161 cgcacgagcc gcacgccctg gtggacctcc acctcgccca cgcggcggga gagatcttcc
     2221 agcagctgta ggaggggctg gggcagggtc tgggtggcgg cgcccaggcg ctggcccagc
     2281 tcttcgagcg gcaccccggc gtcgagggcg cgcaccaggg tggcgtggct cacgcggaag
     2341 ctgcccatgg cgtcgaggga ttccacctcg gccagctggg cgagctgcag cagccggtgg
     2401 gggctctgca gcagcggcgt cagcagctcc agcgtgggct gcatgatcat gggctgatcc
     2461 tgctccaggg gctgccagtg ggcggcggtg cccttgaggt cgcgcagcag gtactcatga
     2521 gccagggcct cgccgtggtc gctgaggcgc aggtgcgcga ggctctcgtc cgcctggatg
     2581 atgcccatgc gccgcaggaa ggggaggaac acggcgcggg tgcgctcctc atccaggggg
     2641 tgcagagtct tcaggaaggc gaggaagggc tgcacggcca gggcctgacc ccggcgctcc
     2701 agcaggtgct gcatgaggaa gtggcggtcc tccgccgggg gcatgcccca ggccttgagg
     2761 tcgtgctcca gcaggctggc gaaggcgcgc tcggccaccc agcggggcgg atggctggtt
     2821 acggcgggca gcagggtctc cacccggccg tcgcggttcc acagcaggcc caggcggtgc
     2881 agcagcgtga acagcaggtt ggcgtcctgc tcctcctgca gcatggcgtt gcgctgcatg
     2941 agctggccta gttccttctt ggcgggcagg ccgcccttga gcacccgcag gcctgccacg
     3001 cagcgcagca gcacgctggt gagggcgagg gagaaccgga agggctcggc gtccttcagc
     3061 ttcacgtccg tcggcgcctg gaaggtcagg gcgccgtcgt cgaagtcctc cagggcgtcg
     3121 gccacccgct cggccatggc ccagccgggg gccggggtgc ccgtgggcag gatgagaccg
     3181 aggtcgcgga ggaccgccag ggcctcaggg cagggcaggg tgccttcgct ggccaggtgc
     3241 ttgagggcca cgaggaatcc gctgtcgagg tccgccaggg tgtcggacag ccgcttgtgg
     3301 tcctccaggt ggaagaccat ggtcttgagg aggcgcatcc ggccttcggg cccgtcctcc
     3361 gaccagatgg ggatgggcag gtggcggcgc tcacagatgg tcctgagctg ctcgtccgag
     3421 cagttcgaga gaagctggaa gtgcgtgtgc ggcatgggca cccgggtaca gaggatcgtc
     3481 cagtgtctca cggaaccccg gaacgctcac gcgcaaaaag cgcccggcag gccgggcgct
     3541 ttctacgaac gggaatggtt ccagttactg ggcggcgagg gtgcccacgg tcacggtgat
     3601 ggcgccgatg gtccccgtgc cgtccaccac ctggcacttg gtgctgtcgg cggtgaaggt
     3661 gatggcgccc gtgccctggg cggccttcaa gtccagggcg atgcgcagga gggggacgtt
     3721 cagcgccacg gggctggcgg tacccttctg ggcggcggtc acctgcagga cgttcccggt
     3781 gaccttgccc ttgaggatct ggggcgcggc gccgagggtg aaggcatcgc cgttctgaac
     3841 gaacgtgttg gcgggatctg ccgcggccac gttcacccag gtcaccttgg tggtgtcggc
     3901 gctgaaggtg gcggtgacgc cggtgccggt ggtggcggcg gggccgacca ggtcgagcac
     3961 caggtgggtg ctgttggaga gcgtgccgtt cttcttcagc tggtaggtac cggtggtggg
     4021 atcggtatag gccagggtcg tggccaccgg cgtgacagtc agcaccgcgg cggagctggt
     4081 gacagaaccc gcgctgttgg tgacggtcac cgtgaagctc gagccgctgt cgcccaccac
     4141 ggtgacgggg gtggtgtagc tggccgaggt ggcgccggtg atggcggcgc cacccttctt
     4201 ccactggtag gagaggggcg cggtgccggt ggccgtcacg gtgaaggtgg cggtggcgcc
     4261 ggcctgcaca ctctggtccg tgggctgggc gctgatggcg ggggccgtgg gcggcggggg
     4321 cggggtgctg ccgccgcctc cgccgccgca ggcgaggagg agggtcaggc ccaagaaggc
     4381 ggtggcggag aggaactgct tcatcggggt catggtcgtc tccgtcacag gccggcgagg
     4441 aggagggcga ggtccgcgtc attcacggtg ccgtcgctgt tcaggtcgca ggtcgcggtg
     4501 gtggtgccgt agaacttgga gaaatagagc aggtcacgca ggtcggtggt gccgtccgcg
     4561 ttcaggtcga gggactgccc cgccaggggc ttcacggtaa ggacaccgca gttgaaggtg
     4621 cccgtgtcaa ctgggccaaa gtcctggatc cggagcttcc aggtgccgtt gggggacttg
     4681 ccgttgaagc ggtccaaggc ctggtagggg atgtagatgc ccgtcagggg caggttgccg
     4741 gaggtctggg tctggatgga aaccgtaccc aggtccgaga aggtggcgta ggttccgcag
     4801 gaagtgccca gggcggagcc cccggctgaa ccggcgttcc ccccgttgat ggcatgggcc
     4861 agggtgacgg tgctggcgtc gggggccacc agggtgatgt ccaggtcgcc cacccatgtg
     4921 tggctgaggt agacggccat cgtgacttcg cccacgttcc cggtcacgcc ggcgacggtg
     4981 aaggggatct ccactgccgc gccgggggtg acggctgtgc cgggtccgcc gggctgcgtg
     5041 gcatccggga ttgccgtgac ggtggtgctg ctgaccgtgg tggcggtgcc cagggcctgt
     5101 acggtgaggg tcgcggggtt ggaggccacg gtgccggcct tgccggtgac ctcacaggtg
     5161 tagacggagc ccgaatcgac cagggcgagg gtgggggtgg tgtaggaggc gctggtggcg
     5221 ccggcgatga ccgcgccgcc cttcttccat tggtaggtga ggacgccgct gcccgaggcc
     5281 gccacggtga aggtggcctt gtggcccaca gccgtcgcga cactctgggg ctgggtggag
     5341 aaggtgacgg ggacgggcac cgccacggtg atgttggcga tggccttctg ggcgc
//
LOCUS       DATGWW010000169         2035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_240827, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000169 DATGWW010000000
VERSION     DATGWW010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240827"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            99..1811
                     /locus_tag="VK150_02480"
     CDS             99..1811
                     /locus_tag="VK150_02480"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HLP30199.1"
                     /translation="MRFTVAVPPQHRNTLLDGVAGEMREALVFVESPTADVVLGGPGE
                     GVFAACPAWPGAEAALALLRAGWERAKDRQSMNRLHEVGRALVSEQNLDRLLDLILSK
                     ARELLKAEAGSIYLMNGEEERRELLFAHTQNALVNVPFHRVSMPVSRQTLAGFVALTR
                     ETLNLKDVYGIPPDAPYRFNDSFDRQAGYRTVSMLVVPMLDTEGQVLGVLQLINRRDD
                     DNGKAGIFSPTDQDLAQSLAGQAAVAVKNAQLRLEIEQLFEGFVAASVTAIEARDPVT
                     SGHSGRVADLTVGLAEAVNATPNGTYGDLRFTDRQLREIRYASLLHDFGKVGVREQVL
                     VKAKKLDPGQLELILQRLRQRELEEALNLLSQAWKRGERYNATHWEQVVKDRQAENER
                     LMHLVRQSNEPTVLAQEVAEGLGLLENLEYAHWTGDRRAVVEPEHLASLRIRRGSLSE
                     TERLEIESHVTHTFRFLERIPWTRDLAGIPEIAYAHHERLSGRGYPRQLEAPAIPVQS
                     RAMAIADVFDALTARDRPYKGAVPVDRSLAILEEEARDGALDRPLLDLFIEARIFERT
                     VPRS"
BASE COUNT          337 a          695 c          694 g          309 t
ORIGIN      
        1 aggccaggcg ttcgatgggg ccgcgccagc tttctttcgg ggcgggggaa ttccgatatg
       61 ctggcgaaac cctcgccgat ttggagcctg attccgcctt gcgattcact gtcgccgtcc
      121 cccctcagca ccgtaacacc ctcctggacg gcgttgccgg ggagatgcgt gaagccctgg
      181 tcttcgtgga gtccccgacg gcggacgtgg tcctcggcgg gcccggtgag ggggtgttcg
      241 ccgcctgtcc cgcctggccc ggcgccgagg ccgccctggc gctgctgagg gccggctggg
      301 agcgggccaa ggaccgccag tccatgaatc gcctccatga ggtgggccgg gcgctggtct
      361 ccgagcagaa cctcgaccgg ctgctggacc tgatcctctc caaggcccgg gagctcctca
      421 aggcggaggc cggctccatc tacctgatga acggggagga ggagcgccgc gagctgctct
      481 tcgcgcacac ccagaacgcc ctggtgaacg tgccgttcca ccgggtctcc atgcccgtct
      541 cccggcagac gctggcgggg ttcgtggccc tcaccaggga gacgctgaac ctgaaggatg
      601 tctatggcat cccccccgat gccccctacc ggttcaacga cagctttgat cggcaggcgg
      661 gctaccgcac cgtctccatg ctcgtcgtgc ccatgctgga cacggaaggg caggtgctgg
      721 gggtgctgca gctcatcaac cgccgcgacg acgataacgg gaaggccggg atcttctccc
      781 ccacggacca ggacctggcc cagagcttgg cggggcaggc ggcggtggcc gtgaagaacg
      841 cccagctgcg cttggaaatc gagcagctgt tcgagggttt cgtcgcggcg tctgtgaccg
      901 ccatcgaggc gcgggacccc gtcaccagcg gtcactcggg ccgggtggcg gacctcaccg
      961 tgggtctggc ggaggcggtg aacgccacgc ccaacggaac ctacggcgac ctccgcttta
     1021 cggaccgcca gctgcgcgag atccgctatg ccagtctgct gcacgacttc gggaaggtcg
     1081 gcgttcgcga gcaggtgctg gtgaaggcca aaaagctgga tccaggccag ctggagctga
     1141 tcctccagcg gctccgccag cgggagctgg aggaggccct gaacctgctt tcccaggcct
     1201 ggaaacgcgg cgagcggtac aacgcgaccc attgggagca ggtggtgaag gatcgccagg
     1261 ccgagaacga gcggctcatg cacctggtcc ggcagagcaa cgagcccacc gtgctggccc
     1321 aggaagtggc cgaggggctg ggcctgctgg agaacctcga atacgcgcac tggaccggcg
     1381 acaggcgggc cgtggtggag cccgagcacc tggccagcct ccgcatccgc cggggcagcc
     1441 tctccgagac ggagcggctg gaaatcgaaa gccatgtcac gcacacattc cgattcctgg
     1501 agcgcatccc ctggacccgc gacctggcgg gcattccgga gatcgcctac gcccatcacg
     1561 agcgcctcag cgggcggggc tacccgcgcc agctggaggc ccccgccatc cctgtccaga
     1621 gccgggccat ggccatcgcc gacgtcttcg acgccctgac cgcccgggac cggccctaca
     1681 agggcgcggt gcccgtggac cgcagcctgg cgatcctgga ggaggaggcc cgggacgggg
     1741 ccctcgaccg gcccctgctg gacctcttca tcgaggcccg catcttcgag cggaccgtcc
     1801 cccggagcta agggtggagc caggggcctg gagccggtag gctataggat tggagtggcc
     1861 atgtctgaac gcgaaccgcg cacgatcgat ctgcagggga tcatggacct gctgccccac
     1921 cggtatccca tcctcctggt ggatcgcatc ctcgactacg agccccagca gtggatccgg
     1981 ggcttcaaga acatcagcta caacgagcag atcttccagg gccactttcc cagcc
//
LOCUS       DATGWW010000170         2032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_421566, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000170 DATGWW010000000
VERSION     DATGWW010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421566"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="VK150_02485"
     CDS             <1..191
                     /locus_tag="VK150_02485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30200.1"
                     /translation="LHAVALKFSHPVTGKQIRLTSPLPKELARLFEPKKKPSRPSDPA
                     APRHGDTKARRPRPGEKP"
     gene            1121..1537
                     /locus_tag="VK150_02490"
     CDS             1121..1537
                     /locus_tag="VK150_02490"
                     /inference="COORDINATES: protein motif:HMM:NF017902.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF family regulator"
                     /protein_id="HLP30201.1"
                     /translation="MTSLTTSALEEKLQELCAAIAADAEVASARLQAEAFLADESAVA
                     LYRRLMQTQHELHHKQHGGEKISDADINAFSLLRDQAEANPLIQSFNEAQETLQGIAN
                     LVNGFVTKTLEKGRVPTQEEVFGSQGGGCGEGCGCH"
     gene            1651..>2032
                     /locus_tag="VK150_02495"
     CDS             1651..>2032
                     /locus_tag="VK150_02495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30202.1"
                     /translation="MATTTTEFEAPDMAARAAAAGEAYQARTDDVIGEKMVLNIGPSH
                     PATHGVLRLIVELDGEIITKAEPDVGFLHRGDEKLAENMHYNQFVPYTDRLDYLAPLA
                     NNVAYACAVEKLLGWELPPRGQAIR"
BASE COUNT          363 a          728 c          581 g          360 t
ORIGIN      
        1 gcctccacgc cgtcgccctt aaattcagcc atccggtcac cggcaagcag atccgcctga
       61 cctcccccct ccccaaggag ctcgccaggc tgttcgaacc caaaaaaaaa ccctcccggc
      121 catcagaccc cgcagcgccc cggcacggcg acaccaaagc gcgccgcccg cgccccggcg
      181 aaaagccctg agttgcgacc ctgacccgcc ccgggacgcg tccgcgagac cgccccgccg
      241 tgcgacatga tggagcgggc cttcgggccc tttggccctg tataattcgg ccctctattg
      301 atgggctctc tattgatggg cctctatggg tcggccctcg atcgatcgcc ctctatgaat
      361 gggctctttg tgtcgcgcct ggcaggatga gcgggccttc agcccttcgc ctttttcgcc
      421 atttttcctg gggcgttgcc ccaggctggg atggtggcgg gccctttggc cctgtataat
      481 tcggccctct attgatgggc ctcaatgggt cgacactcta tcgatggccc tctatgaagg
      541 ggcactttgt ggcgcgcccg gcaggatgaa gcgggccttc agcccttcgc cttttcgcca
      601 attttttcct ggggcgttgc cccaggctgg gatggtgacg ggccttttgg ccctgtatga
      661 atgggcctct gtggatcgac cctctatcga tggcctttcc tgaggcgttg ccccaggctg
      721 ggatggaggc gcgcctttgg ccctctatgg agaacacccg acaccgccgc acggccctga
      781 acggtcctcc gttctccgcc cgacacctgg cattcccagc attcccagcg aagagccatt
      841 tctcgcaggc ccaccaaagg ggcaacgccc cgcccctatc ccagcctggg gcaacgcccc
      901 aggaaactcc ccccataaaa ccacaagggc taaaagcccg ccccatcggc atcaccgatc
      961 cccaggactc cgcttcatcc ttcatccttc atgcttcctc cttcctcctt catccctccc
     1021 tcccatccgc tcgcccacgc cgaggcccgc catccaacac cctgccggcc gcgcaccgat
     1081 tccgttggcg cccgcggcca cccggtgctt taggttcctc atgacatccc tgaccacatc
     1141 cgccttggaa gagaagcttc aagagctctg cgctgccatc gccgcggacg ccgaggtcgc
     1201 ctcggctcgg ctgcaggccg aggcgtttct cgccgacgaa tccgccgtcg ccctctaccg
     1261 tcgcctcatg cagacccagc atgaactgca tcacaagcaa cacggcgggg agaaaatcag
     1321 cgacgcggac atcaacgcgt tcagcctcct ccgcgaccag gcggaagcca atccgctcat
     1381 ccaaagcttc aacgaagccc aggaaaccct gcaggggatc gccaacctgg tgaacggctt
     1441 cgtcaccaaa accctcgaaa aagggcgcgt cccgacccag gaagaggttt tcggaagcca
     1501 gggcggcggc tgcggcgaag ggtgcggctg ccactgaccg gaccactcaa cgcccgaccc
     1561 ttccagccgg gcaccccctt ggacgcccct ttgtgaaaaa tttcacaaaa ggcggttgcc
     1621 gctggggcac ctgcggcgtc tctttccctg atggcgacca cgacgacaga attcgaggct
     1681 ccggacatgg cggcgcgcgc ggcggcggcg ggcgaggcgt atcaggcgcg cactgacgat
     1741 gtgattggcg agaagatggt gctgaacatc ggcccgtcgc atccggccac gcacggggtg
     1801 ctgcggctga tcgtggaact ggacggggag atcatcacca aggcggagcc cgacgtggga
     1861 ttcctgcatc gcggtgacga aaagctcgcc gagaacatgc attacaacca gtttgtgccg
     1921 tacaccgacc ggctcgacta tctggcgccg ctggcgaaca acgtggccta cgcgtgcgcg
     1981 gtggaaaaac tgctgggctg ggagcttccg ccgcgcggcc aggcgatccg gg
//
LOCUS       DATGWW010000171         1908 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_421571, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000171 DATGWW010000000
VERSION     DATGWW010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1908
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421571"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..402
                     /locus_tag="VK150_02500"
     CDS             <1..402
                     /locus_tag="VK150_02500"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HLP30203.1"
                     /translation="VDTLKTLAHPVRLRILALLREGELCVCEVAEVLDIAPSTVSEHL
                     TGLRRTGVVREWKVGRWVHVALADEATVRPVLEALWPLMGEAEADLARDRVQARALRC
                     KTCDPGACPAPDLRSKPLRIATLSPRAEEHP"
     gene            399..731
                     /locus_tag="VK150_02505"
     CDS             399..731
                     /locus_tag="VK150_02505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30204.1"
                     /translation="MTAQTATQNQADTGLNEITLNLIALGAAIGANAERAFRAHQARL
                     TELGVSKEAMIEAVNMGLRVKGDPHAIMMALAESTLTEGGGCCGGACACEAEGKEKGD
                     CGDDCGCC"
     gene            747..1229
                     /locus_tag="VK150_02510"
     CDS             747..1229
                     /locus_tag="VK150_02510"
                     /inference="COORDINATES: protein motif:HMM:NF040504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsinothricin resistance N-acetyltransferase
                     ArsN1 family B"
                     /protein_id="HLP30205.1"
                     /translation="MIRAVRLEDAKALVAIYNPYIRETVITFEEEAISEHEMASRIAK
                     VMEGYPWLVWEEDGVVVGYAYGSTWRTRHAYRFTTETTIYLAPEGQGKGIGSRLYEAL
                     LAELKQRGFHSALGGIALPNAPSVRLHEALGFRKVGHMTEAGWKFGAWVDVGFWERLL
                     "
     gene            1312..1647
                     /locus_tag="VK150_02515"
     CDS             1312..1647
                     /locus_tag="VK150_02515"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HLP30206.1"
                     /translation="MTGPVEQAAEQLKALGHPVRLSILRRVVQGPVAGTPAGELQSRL
                     DIPASTLSHHLATLADAGLVQVAREGTTLRYRADFGSLRALTDYLWQDCWSGGGASGS
                     DPSSCCGRD"
     gene            1715..>1908
                     /locus_tag="VK150_02520"
     CDS             1715..>1908
                     /locus_tag="VK150_02520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30207.1"
                     /translation="MDSQTIKSAVRERYAGFVTQNQSCCGPATSCGCEPGEQSLGLGY
                     ASQDLQAVPEGANLGLGCGNP"
BASE COUNT          312 a          675 c          633 g          288 t
ORIGIN      
        1 gtggacaccc tgaagaccct ggcccacccc gtgcgcctgc gcatcctcgc actcctgcgc
       61 gagggtgagc tctgcgtctg cgaggtggct gaggtgctgg acatagcgcc ctccactgtc
      121 tccgagcacc tcacgggcct gcgccgcacc ggggtggtgc gggagtggaa ggtgggccgc
      181 tgggtgcacg tggccctggc cgacgaagcc acggtgcggc ccgtgctgga ggcactctgg
      241 cccctcatgg gagaggccga ggcggacctg gcccgggatc gcgtccaggc ccgcgccctc
      301 cgctgcaaga cctgcgatcc gggagcctgc ccggcgccgg acctccgttc aaaacccctt
      361 cgaatcgcca ccctttcccc ccgtgccgag gagcacccat gaccgcccag accgcgaccc
      421 agaaccaggc cgacaccggc ctgaacgaaa tcaccctcaa cctcatcgcc ctgggcgccg
      481 ccatcggcgc caacgccgag cgggccttcc gcgcccacca ggcccgtctc accgagctcg
      541 gcgtgtccaa agaggccatg attgaagccg tgaacatggg cctgcgcgtg aagggcgacc
      601 cccacgcgat catgatggcg ctggccgaat ccaccctcac cgagggcggc ggctgctgtg
      661 gcggtgcctg cgcctgcgag gccgaaggca aggagaaggg cgactgcggc gacgactgcg
      721 gctgctgcta ggtccgaggg ggcgccatga tccgcgcggt acggcttgag gatgccaagg
      781 ccctggtggc gatctacaac ccgtacatcc gggagacggt catcaccttc gaagaggagg
      841 ccatctcgga gcatgagatg gcctcccgca tcgccaaggt gatggagggc tacccctggc
      901 tggtgtggga ggaggatggc gtcgtggtcg gctacgccta cggctccacc tggcggaccc
      961 gccacgccta ccgcttcacc accgagacga ccatctacct ggccccggaa ggccagggga
     1021 agggcatcgg gtcgcggctc tacgaggccc tgctggcgga gttgaagcag cgcggcttcc
     1081 attccgccct gggcggcatc gccctgccca acgcgcccag cgtgcgcctg cacgaggccc
     1141 tcggattcag gaaggtgggc cacatgacgg aggccggctg gaagttcggg gcctgggtgg
     1201 acgtggggtt ctgggagcgg ttgctgtgaa ggcgtcgcta atttcgaaaa aattcgaaat
     1261 tagctcttgc gtcatatttc gaaaatttta gaattaagcc aggaggaagc catgaccggg
     1321 cccgtggagc aggcggcaga gcagctgaag gcccttggcc atccggtgcg cctgtccatc
     1381 ctgcgccgcg tggtgcaagg ccccgtggcg gggacgcccg ccggggagct gcagtcgcgc
     1441 ctggacatcc cggcttccac cctcagccat catctggcca ccctcgccga cgccggcctg
     1501 gtgcaggtgg cccgggaagg caccacgctc cgctaccgcg ccgacttcgg ctccctgcgg
     1561 gcgctcaccg actacctctg gcaggactgc tggtccggcg gcggggcctc cggatccgat
     1621 ccttcctcct gctgcggcag ggactgacct tccactcccc tggaacccgg atgcccgcgc
     1681 gtcccaggaa acgtccatct gaaaggccct acccatggat tcccaaacca tcaaatccgc
     1741 cgtccgcgaa cgctacgcag gcttcgtcac ccagaaccag agctgctgcg gccccgccac
     1801 ctcctgcggc tgcgagccgg gggagcagag ccttggtctc ggctacgcct cgcaggatct
     1861 tcaggccgtg cccgaggggg ccaacctcgg cctgggttgc ggcaaccc
//
LOCUS       DATGWW010000172         1768 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_188314, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000172 DATGWW010000000
VERSION     DATGWW010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188314"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..766
                     /locus_tag="VK150_02525"
     CDS             <1..766
                     /locus_tag="VK150_02525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30208.1"
                     /translation="GKHWDPKNWVGAVVENLAGAPGAYHVVRGGCFQGSNHQVTHWFG
                     GGIGLEDAGFRRAAAERIRALGPSGRGAWVFWLEPQGAGLPSPEELASRPAASPARFS
                     IRHPMLHRMLRRQTPPAARGAFIGSLTAEAAVAALSRVARILADYQGQLHRARAEPAH
                     DRWSEQALDPVATVAGALALAEGAAPAAPAPKPMEAALEAAIRDLYQTQGEALRTLES
                     AFDETSGYAAWDAPRNPLRELLSDYLAEDAETRAQV"
     gene            777..1223
                     /locus_tag="VK150_02530"
     CDS             777..1223
                     /locus_tag="VK150_02530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30209.1"
                     /translation="MGYIVLANSTRVILPLRVRLEAPDRIPRLWGILVSQAKASGHCL
                     QSFIEMGEPGLPRPFLGERWRYEWRSDGDGMLACWLGFPNVFFSGGIDPVARISVEAM
                     GRFGTGGGMLRSLSRIHITVKNGIKPSPGPGAAKWVPDDSPRPFPA"
     gene            complement(1261..1551)
                     /locus_tag="VK150_02535"
     CDS             complement(1261..1551)
                     /locus_tag="VK150_02535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30210.1"
                     /translation="MIRMIEMRQWPASAEERLKAADELNDFNRVAEANVMYGRVTGGS
                     GLTGKQKVSALGGLAATFKSMGMKDQALDAADQLLAINPRNTFALRLKEQLK"
BASE COUNT          226 a          633 c          612 g          297 t
ORIGIN      
        1 cggcaagcac tgggatccca agaactgggt gggcgccgtg gtggagaacc tcgcgggcgc
       61 ccccggcgcc taccatgtgg ttcggggggg ctgtttccaa ggcagtaacc atcaggttac
      121 ccactggttc ggcggcggca tcggcctcga ggacgcgggc ttccggcgcg cggccgcgga
      181 gcgcatccgc gccctgggcc cgagcggccg gggcgcctgg gtcttctggc tggagcctca
      241 gggcgccggt ctcccgtccc cggaagagct tgcctcgcgg ccggccgcct ccccggcgcg
      301 cttctccatc cgccacccca tgctccaccg catgttgcgc cgccagaccc ctcccgccgc
      361 ccgtggagcc tttatcggca gtctgaccgc ggaggcggcg gtcgcggccc tgtcccgcgt
      421 ggcccgcatc ctggctgact accagggcca gctccaccgt gcccgcgccg agcccgccca
      481 tgaccgctgg tcggagcagg ccctggatcc cgtggccacg gtggctgggg cccttgccct
      541 cgccgaaggc gctgcccccg cggcccccgc gcccaagccc atggaggccg ccctggaggc
      601 ggccattcgc gatctgtacc agacccaggg cgaggccctg cggaccctgg agtcggcctt
      661 cgatgaaacc agcggctacg cggcctggga cgcgccccgc aatcccctga gggagctcct
      721 gagcgactac ttggccgagg acgccgaaac ccgcgcccag gtctgagcgc agcgccatgg
      781 gttatatcgt cctcgccaac agcacccgcg tgattctgcc cctgcgcgtc cgcctggagg
      841 ccccggatcg catccctcgc ctatggggca ttctcgtgtc ccaggccaag gcctcgggcc
      901 attgcctgca gtccttcatc gagatggggg agccgggcct gccccggcct ttcctggggg
      961 aacgttggcg ttacgaatgg cggagtgatg gggatggcat gctggcctgc tggctggggt
     1021 tccccaacgt gttcttctcc gggggcatcg atcccgtcgc gcgcatctcg gtggaggcca
     1081 tgggccgctt cgggaccggt ggtggtatgt tgcgatccct gtcgcgaatc cacatcacgg
     1141 tgaagaacgg gatcaagcca tccccggggc cgggggcggc caagtgggtc cccgacgaca
     1201 gccccaggcc ctttccggcc taagcccggc ctgagccccg ccttagccgg cgggcccggt
     1261 ctacttcagc tgctccttga ggcgcagggc gaaggtgttg cgggggttga tggcgaggag
     1321 ctggtcggcc gcatcgaggg cctgatcctt catgcccatg gacttgaagg tcgccgccag
     1381 gcctcccagg gccgatacct tctgcttccc ggtgagaccg gaccctcccg tcacgcgtcc
     1441 gtacatcaca ttggcctcgg ccacacggtt gaagtcgttc aactcgtccg cggctttgag
     1501 gcgctcttcg gccgatgcgg gccactggcg catctcgatc atgcggatca attccgccag
     1561 gcgttcctgt gatccccggg gcgccccgga tgtgcctggt gagggtgggc cgaggcggtc
     1621 gtcgcggaag gcgctttgcc ggccgcggga gtgagcggct cttgaaccgg ttctgggacg
     1681 cgctcccccg tcggctccac ggcctcggga taggggggct gcgctacggg accggatgag
     1741 acttcgacct tctgggccgg agccgcct
//
LOCUS       DATGWW010000173         2431 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_103319, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000173 DATGWW010000000
VERSION     DATGWW010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103319"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(874..1185)
                     /locus_tag="VK150_02540"
     CDS             complement(874..1185)
                     /locus_tag="VK150_02540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30211.1"
                     /translation="MIRTLKSVIRRYLGRHSALHWSDIIPYALVAMRMTPAASHGLPP
                     FTIITGGVPVLPSQLPGGLDDVPGDDATPWQEAAYFDAMVHRTEHIREHTAARLTRRD
                     K"
     gene            complement(1564..2400)
                     /locus_tag="VK150_02545"
     CDS             complement(1564..2400)
                     /locus_tag="VK150_02545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30212.1"
                     /translation="MRWRIAFRYIPRQLNSIPDDMCRRAEAAGAPVEFLAGDVPPDAP
                     VVDLAALYRVVDELAAGVRNISYTGPPGAPSDGDPRGGASVEGSDWALDEGPDAVEVV
                     MAAWDDRLRGVPCGICAEVDHEGEMLVCDRCGAPFHSGCQPLSPAGDGPWYCSQCRGI
                     ICVQGSSDPVEDLELLDYLFRGILPDDLDLAARVRRLSGHYRGRGQELETLANPYGVE
                     SLQRWVSVPPIPMRPDIVRDTHEATGHVGRAKLAEALLAAYWWPGLRAQVAREVARCP
                     MC"
BASE COUNT          419 a          896 c          758 g          358 t
ORIGIN      
        1 gtagcgccgc ggtacaccgc ggtgccgcag cgccaacaac agtggcgcta cgccaagtag
       61 gcccctatgg gccatcgccg gtggcctgac gccacatggc gtgccaggaa atcctcctgg
      121 tacggcgcca gcagagcgcc acgcgcccct cctgagctac aatgggctgc cgccaggtag
      181 cggcaaccct cccggggcac tcagcagtgt gcccgctcct ccaggtgccg cggctgagtc
      241 gcgacaaggc cgcgggacac cgcggtgagt cccgcgagcc gcagtgaaga ccggcagcgc
      301 cggattgcgc cgggggcccc agaccccaga gcgccgccac ctgtgacctg ccccccatgc
      361 gggtaacccc tagtcctggg gacgtgccgc gggggcagtc accaggcgcc agggtacccc
      421 ccctcatacc gatagtcccc cagggggtgc tggcgccact cctcatgccg gcccaacgcg
      481 gcgcgcccgc cgccaccgcg gccgctcctc ctccgccagc tcaggtgcag ggggctgggc
      541 cccgcggggt gggacctcca cgtcgtcctc atcccacacc agctccgcgg gggaccaccc
      601 ctcagtatag ggcaccaaca gtgccgcgtg cacccacctg ggccgggcag cccggcggcg
      661 cgtcgccgag tcctcagcgg gctccagcag cacccgctgc ccgcataaac cgcggacctc
      721 cagcacccgg tagggcccat gccccttcgc ggccagccgg ctgcctctct cccaggcctt
      781 ggtcctctgg aggaccaggt cccccggcga gaacagaaac atggtcgccg gggcgacccc
      841 cttagcgtca tggcgacgct gggcggcctg cacctacttg tcacggcggg tgagccgcgc
      901 cgcggtgtgc tcgcggatat gctcggtgcg gtggaccatg gcatcaaagt atgccgcctc
      961 ctgccaaggt gtggcgtcat cgccgggaac atcgtccaac cctcccggca gctgggaagg
     1021 gaggacagga accccccccg tgatgatggt gaaggggggg agcccgtgcg aggcggcagg
     1081 ggtcatcctc atcgccacca aggcgtaggg gatgatgtcg ctccaatgga gcgcggaatg
     1141 ccgtcccaag taacggcgga tgacggactt cagggtccga atcatcctct ccacctaccc
     1201 attcgcccgg ctgttgccca cggtcccctg ccgaactgcg atgtgcagcc ggcggagctg
     1261 ggcacggaac tcagcctccc actctgtccc gtgatccagc cggacgaaat ggggtcgacc
     1321 ccagcggcat accacggcgt cgtaaaacca ggccgccgtg gtgaatgccc gcttgttggg
     1381 tatggcgtca gcctctaccc acttggtaaa gacatcgacg gcaaccgcca tgtagcggtt
     1441 gccatcggca tcagggggga atgggccggc aaggtccact gaccacccct ggaatggacc
     1501 acctggtcgg tccgacacgg cgggcggcag ctcggtagac cgctcgcctc ccacatgctc
     1561 gggctagcac atggggcacc tggcgacctc ccgcgccacc tgggccctca gccccggcca
     1621 ccaataggca gcaagcaacg cttctgccag cttggcgcgg ccgacgtgac ccgtggcctc
     1681 gtgggtgtcc cggacgatgt ctggcctcat cggtatggga ggcacggaca cccaccgctg
     1741 gaggctctca accccatatg ggttggcgag ggtctctaac tcctggcccc tgcccctata
     1801 gtgccctgaa agtcggcgga cacgggcagc taggtccagg tcgtccggca ggatgcctct
     1861 aaagaggtag tccagcaact ccaagtcctc cactgggtcg gatgacccct ggacacagat
     1921 gatgccgcgg cactgggaac agtaccacgg cccatctcct gccggactga ggggctggca
     1981 gccgctgtgg aagggggccc cacagcggtc acagaccagc atctcgccct catgatccac
     2041 ctcggcgcag atcccacatg ggactccccg cagccggtca tcccaagccg ccataaccac
     2101 ctccaccgcg tctggcccct catctagggc ccagtcgctg ccctccacac tggcaccacc
     2161 tctagggtcc ccgtcagagg gggccccagg cgggccagtg tagctgatgt tgcggacccc
     2221 agccgccaac tcatccacca cccggtatag ggccgccaga tccactacag gtgcatcagg
     2281 tggcacatcc ccagccagga actccaccgg tgcgcctgct gcctcagcac ggcgacacat
     2341 gtcgtcgggt atggagttca actggcgggg tatgtaccgg aaggcaatcc tccacctcat
     2401 ctatcgcgcc agggtcttga ccccctctac a
//
LOCUS       DATGWW010000174         1884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_325677, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000174 DATGWW010000000
VERSION     DATGWW010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_325677"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..779
                     /locus_tag="VK150_02550"
     CDS             3..779
                     /locus_tag="VK150_02550"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HLP30213.1"
                     /translation="MLPGLLLVVLYLLWMIFKAVTDPKSCPATPVPEAEKSGLMREVV
                     VALIPPLLLILAVLGSILAGIATPTEAASVGSVGAMILAALRGKLGLGILRQAVISTA
                     TITSMVFIILFGAAVFSIVFRMMGGDNLVHEFLSSMPGGAIGATIIVMFIMFLLGFIL
                     DTFEIIFIVIPITAPVLLALGVDPIWLGVMVGVNLQTSFLTPPFGFALFYLRGVAPAR
                     VTTGMIYRGVVPFVTLQVVGLILLFFFPQLITWLPGLLYQ"
     gene            complement(891..>1884)
                     /locus_tag="VK150_02555"
     CDS             complement(891..>1884)
                     /locus_tag="VK150_02555"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HLP30214.1"
                     /translation="MVTTWPKNFPGLGVGAQRLADRITAASGGRLTIQVFAAGEMVPG
                     LQALDAVIDGSAEMSHGAAYYWQNKAQGLAFFTGVPFGMTSRELTGWVRHMGGQEIWD
                     EIYDQFGVQGFLSGDTGTQAGGWFKNELTGVADVQGLRFRTPGLGGQVWGKLGASVTN
                     LAAGEIFAALQSGTLDAAEFVGPYNDLALGFYQIAKNYYFPSFIEPGLATELVVDKAK
                     YQELPADLQALVKDVCQAEYDNVAADFAANDPRALQALVNEHGVQVRQFPEEILEAGA
                     KAATEVLSEIREGGDALTKKTAESFIAALNVVRQKTEGTDALFLAARQKYFTLS"
BASE COUNT          286 a          624 c          601 g          373 t
ORIGIN      
        1 ccgtgctgcc tggcctgctg ctggtggtcc tctatctgct ctggatgatc ttcaaggccg
       61 tcaccgatcc caaatcctgc ccggccaccc cagtgcccga ggcagagaaa tccggtttga
      121 tgcgcgaagt ggtggtggcg ctcatcccgc cgctgctgct gatcctggcg gttctgggct
      181 ccatcctcgc tggtatcgcc accccgaccg aggcggcctc cgtaggatcg gttggcgcca
      241 tgatcctcgc cgccctgcgc ggcaagctgg gcctgggcat cctgcgccag gcggtgatct
      301 cgacggccac catcacctca atggtgttca tcatcctgtt cggcgccgcc gtcttctcca
      361 tcgtcttccg catgatgggc ggcgacaacc tggtgcacga gttcctctcg tcgatgccgg
      421 gcggggcgat cggcgccacg atcatcgtga tgttcatcat gttcctgctc gggttcatcc
      481 tggacacgtt tgagatcatc ttcatcgtga tcccgatcac agcgcccgtg ctgctggcac
      541 tgggcgtcga cccgatctgg ctgggcgtga tggtgggcgt gaacctgcag accagcttcc
      601 tgaccccgcc gttcggcttc gccctgttct acctgcgcgg ggtagcgccg gcccgggtga
      661 ccacgggcat gatctatcgc ggcgtggtgc cctttgtgac gctgcaggtc gtcgggctga
      721 tcctgctgtt cttcttcccg cagctcatca cctggctgcc gggcctgctc tatcaataag
      781 gccgcaggcc gacggcgtca caaccgccgg ccgccttttc ccggctcagc aaaaaagcag
      841 aggccccatc gcctggcgat ggggcctctt gtttgaggtg tagcgggtcg ttagctcagc
      901 gtgaaatact tctggcgggc ggcgaggaac agcgcgtccg tgccttccgt cttctggcga
      961 accacattga gcgcggcgat gaagctctca gccgtcttct tggtcagggc atcgccacct
     1021 tcgcggattt cgctcagcac ttcggtagca gccttggcac ccgcctcgag gatctcctcg
     1081 gggaactgcc ggacctggac gccgtgttcg ttgaccagcg cctgcagggc gcgcggatca
     1141 ttggcggcaa agtcggcggc cacgttgtcg tactcggcct ggcagacatc cttgaccagg
     1201 gcctggaggt ctgcagggag ctcctgatac ttggccttgt cgaccaccag ctcggtggcc
     1261 aggcccggct cgatgaagct cgggaagtag tagttcttgg cgatctggta gaagccgaga
     1321 gcgagatcgt tataggggcc aacgaactcg gcggcatcca gcgtgcccga ctgcagcgcg
     1381 gcaaagattt cgccggccgc caggttagtg accgaggcgc cgagcttgcc ccagacctgg
     1441 ccgcccagac ccggcgtgcg gaagcgcagg ccctgcacat cggccacgcc ggtcagttcg
     1501 ttcttgaacc agccgcccgc ctgggtgccc gtatcgccgg acaggaagcc ctgcacgccg
     1561 aactggtcgt agatttcgtc ccagatctcc tggccgccca tgtggcggac ccaaccggtc
     1621 agttcgcggc tggtcatgcc gaacggcacg cccgtgaaga aggcgaggcc ctgggccttg
     1681 ttctgccagt agtaggcagc gccatggctc atttcagccg aaccgtcgat gaccgcgtcc
     1741 agcgcctgca ggccgggcac catttcacca gcggcaaaca cctggatcgt gaggcgaccg
     1801 ccagatgccg cggtgatgcg gtcggcgagg cgctgtgcgc ccacgccaag gccggggaag
     1861 ttcttgggcc aggtggtgac catg
//
LOCUS       DATGWW010000175         3044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_421877, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000175 DATGWW010000000
VERSION     DATGWW010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3044
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421877"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="VK150_02560"
     CDS             <1..361
                     /locus_tag="VK150_02560"
                     /inference="COORDINATES: protein motif:HMM:TIGR00697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="queuosine precursor transporter"
                     /protein_id="HLP30215.1"
                     /translation="TARGIVASLAAFWTGEFVNSYVMARMKVWTGGRWLWTRTIGSTV
                     AGEAVDSLVVTFGLFAFTLPVKTIFVMAGSGYVFKVLYEALATPVTYAVVGFLKRTEG
                     VDVYDEGTDFSPFVKDA"
     gene            complement(460..999)
                     /locus_tag="VK150_02565"
     CDS             complement(460..999)
                     /locus_tag="VK150_02565"
                     /inference="COORDINATES: protein motif:HMM:NF024978.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HLP30216.1"
                     /translation="MRALSLSAALLSLALLGACSGYHVTYDYDVTASYGRYRTFDYYT
                     SKKGTGGTTSLMDKRVRAAVEKELQTKGFVMETKADPDFLVTYYPIVHERRYRTTTHI
                     GWGWGYRPIYGRIGTSTSQVHHYQEGTIVIEIVDFKSNQMIWQGAAAGALTGLDNPED
                     ADEVVPRAVRDILSKFPPR"
     gene            1180..2643
                     /locus_tag="VK150_02570"
     CDS             1180..2643
                     /locus_tag="VK150_02570"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HLP30217.1"
                     /translation="MVLDPTLDPGASSPLYLQLQRRLRGLIQQGEWRPGSRLPAVPEL
                     AQRWGVHRLTVLKALAGLKRTGWIQTVQGRGSFVAPRLPEAPGLRASSEFPFEGSPLL
                     VHDGELGSWLGETLERAQDRHLVSFSAGFIPSDLLPGEQLRRITAQVLKDLGSEAWVY
                     SAPAGHAPYLEAVSRWLASEDEPIDEGWGIRALPGAQSGLALALESFTVPGDRVLVES
                     PCYVGILALIRALGREAVPVPVDRQGLDPERLASALQRSEAKMLFTVPSFHNPTGMTQ
                     SKARRERVLALTRAHGVIVVTDSAYGDLRFSGNSLPPFRRLEGADHVIHLGSFSKSLA
                     AGLRLGYLIAKDDLLRRMAPIQEVQTIAQPPLLQAVVARFLDTGGFRRHLARLRRALK
                     ERRDAMVEALAEHFPPGTQVSEPKGGMHLWVVMPEDFSALDLHRDALQHGLGFAPGPL
                     FFADGRGTNCLRLNFSTHDPETTRDAIARLGHLVHRV"
     gene            2687..>3044
                     /locus_tag="VK150_02575"
     CDS             2687..>3044
                     /locus_tag="VK150_02575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30218.1"
                     /translation="MTASLIEIRPSDHAASPEDRARRMTNPGFGRMFTDHMVVVPYKE
                     GEGWGQGVLKAYGPIEMDPAASVLHYGQAIFEGFKAYKQKDGSIASFRPEANARRFNT
                     SAARLAMPELPEALFLE"
BASE COUNT          439 a         1058 c         1052 g          495 t
ORIGIN      
        1 cacggcccga ggcatcgtgg ccagcctcgc ggccttctgg accggcgagt tcgtgaacag
       61 ctacgtcatg gcgaggatga aggtgtggac cggcggccgc tggctctgga cccgcaccat
      121 cggcagcacc gtggccggcg aggcggtgga cagcctggtg gtcaccttcg gcctcttcgc
      181 cttcacgctg ccggtgaaga ccatcttcgt catggcgggg agcgggtacg tcttcaaggt
      241 gctctacgag gccctggcca cgccggtcac ctatgccgtg gtgggcttcc tcaagcgcac
      301 cgagggcgtg gatgtctacg acgaggggac cgacttcagc cccttcgtga aggacgcctg
      361 agcggagggc aaggatcaag cggagcgcgg ctttgccgcg aagcgcgggg gggcccgggg
      421 ttgttcgcga gtgaagcgga gcgaggaacc cccggaaggc taccggggcg ggaacttcga
      481 caggatgtcg cggacggccc ggggcaccac ctcgtcggcg tcctcggggt tgtccaggcc
      541 cgtgagcgct ccggccgcgg cgccctgcca gatcatctgg ttggacttga agtccacgat
      601 ctcgatgacg atggtgcctt cctggtagtg gtgcacctgg ctggtgctgg tgccgatgcg
      661 cccgtagatg ggacggtagc cccagcccca gccgatgtgg gtggtggtgc ggtaccggcg
      721 ctcatgcacg atggggtagt aggtgacgag gaagtcgggg tcggccttgg tctccatgac
      781 gaagcccttg gtctgcagct ccttttccac ggcggcccgc acccgcttgt ccatgaggct
      841 ggtggtgccg cccgtgccct ttttggacgt gtagtagtcg aaggtcctgt agcggccgta
      901 cgaggccgtc acgtcgtagt cgtaggtcac gtggtagccg gagcaggccc cgaggagggc
      961 cagggagagc agggcggcgg acagggacag ggcgcgcatg gatcctccgg ggcaccatta
     1021 tggacggggc ggatcggcaa aggttgaacc ctgccagtgg tctagggtgg tatggggaat
     1081 cccggaaacg cgcgggggcg acccgcctgg tctgtcctgg gctgtgaatt tgctttcgtt
     1141 tctttgaacc gaaagggaaa caggccgatc ctgatcggga tggttctcga tcccaccctc
     1201 gaccctggcg cgtccagccc cctctacctg caactgcaga ggcggctccg tgggctcatc
     1261 cagcagggcg agtggcggcc gggctcgcgc ctgccggcgg tgcccgagct ggcgcagcgc
     1321 tggggcgtgc accgcctcac cgtgctcaag gccctggccg gcctgaagcg cacgggctgg
     1381 atccagaccg tccagggcag gggcagcttc gtggccccgc ggctgccgga ggccccgggc
     1441 cttcgggcca gcagcgagtt cccctttgag ggttcgcccc tcctcgtgca cgacggggag
     1501 ctgggctcct ggctgggcga gaccttggaa cgggcccagg accgacacct ggtgagcttc
     1561 tccgccggct tcatcccatc tgacctgctg cctggcgagc agctgcggcg catcacggcc
     1621 caggtactga aggacctcgg gtcggaggcc tgggtctact cggcgcccgc tggccacgcc
     1681 ccgtacctgg aggccgtgag ccgctggctg gcctccgagg acgagcccat cgacgagggc
     1741 tggggcatcc gggccctgcc tggcgcccag tcgggcctgg ccctggccct ggaatccttc
     1801 acggtgcccg gcgatcgggt gctggtggag agcccctgct acgtgggcat cctggcgctg
     1861 atccgcgccc tcggccgaga ggccgtgccc gtaccggtgg accgccaggg cctggacccg
     1921 gagcgcctgg cctcggccct gcagcgcagc gaagcgaaga tgcttttcac ggtgccgagc
     1981 ttccacaacc ccacgggcat gacccagtcc aaggcccggc gcgaacgggt gctggcgctg
     2041 acgcgggccc acggcgtgat cgtcgtgacg gattccgcct atggcgacct gcgcttctcg
     2101 ggcaactccc tgccgccttt ccggcgcctg gagggcgccg accatgtcat ccacctgggc
     2161 agcttctcca agtccctggc ggccggcctg cgcctgggct acctcatcgc caaggacgac
     2221 ctgctgcgcc gcatggcgcc catccaggaa gtgcagacca tcgcccagcc gcccctgctg
     2281 caggcggtgg tggcccgctt cctcgacacg ggcggcttcc ggcggcacct ggcccggctc
     2341 cgccgcgccc tgaaggaacg ccgcgacgcc atggtggagg ccctggccga gcacttcccc
     2401 cccggcaccc aggtgtccga gcccaagggc ggcatgcacc tctgggtggt gatgcccgag
     2461 gatttctccg ccctggacct gcaccgcgac gccctccagc acggcctggg attcgcgccg
     2521 ggccccctct tcttcgccga cgggcggggc accaactgcc ttcgattgaa cttttccacc
     2581 cacgacccag agaccacccg ggatgccatc gcgcgcctcg gccacctggt ccaccgggtc
     2641 tgatccggtc ccccactccc accacggagt tcctgtgagc cacgccatga ccgcctccct
     2701 gatcgagatc cgtccctcgg atcacgccgc cagccctgaa gaccgggcca ggcgcatgac
     2761 caaccccggc ttcggccgca tgttcaccga ccacatggtg gtggtgccct acaaggaggg
     2821 cgaaggctgg ggccagggcg tgctcaaggc ctacgggccc atcgagatgg accccgccgc
     2881 ctccgtgctg cattacggcc aggccatctt cgaggggttc aaggcctaca agcagaagga
     2941 cggcagcatc gcctccttcc gccctgaggc caatgctcgg cgcttcaaca cctccgcggc
     3001 ccggctcgcc atgccggagc tgcccgaggc cctcttcctc gaag
//
LOCUS       DATGWW010000176         1626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_286020, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000176 DATGWW010000000
VERSION     DATGWW010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286020"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..497
                     /locus_tag="VK150_02580"
     CDS             <1..497
                     /locus_tag="VK150_02580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30219.1"
                     /translation="NPQTTPPVTTPPVAPSDAIQEKKPAGPVEAPPAPSDLVIFMSPV
                     ASEIKVGEAVRITLTVSGGKGLSSGSLELRLPPGLRLQGVTPGEFITGESGSLESIPG
                     KDGVLRLVFKRNPTGTDSGPFATLELVGLSAGNAPVLLQSGQFLVGAAPISGRWSNAL
                     VTVQ"
     gene            494..952
                     /locus_tag="VK150_02585"
     CDS             494..952
                     /locus_tag="VK150_02585"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HLP30220.1"
                     /translation="MKRQAGFTLMELVVTATVLVILASATVPLVRNGLKRQQELELRR
                     TLREMRMAIDEYKKQAEQQKIKAPPVDANFYPESLELLVEGVPVAGSASRKIRFLRRI
                     PVDPLTGKAEWGLRSSNDDPTSTSWGGGHVQDVYSLSQGTGMNGIPYREW"
     gene            1079..1164
                     /locus_tag="VK150_02590"
     tRNA            1079..1164
                     /locus_tag="VK150_02590"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1113..1115,aa:Leu,seq:cag)
     gene            1404..>1626
                     /gene="rpsO"
                     /locus_tag="VK150_02595"
     CDS             1404..>1626
                     /gene="rpsO"
                     /locus_tag="VK150_02595"
                     /inference="COORDINATES: protein motif:HMM:TIGR00952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HLP30221.1"
                     /translation="MALNVEQKKIIIDDYKQHESDTGSPEVQVAILTKRINDLTEHFK
                     THTKDYHSRRGLMIMVGQRRRLLDYLKKKS"
BASE COUNT          305 a          557 c          530 g          234 t
ORIGIN      
        1 ccaaccccca aaccacgccg ccagtgacga ctccgcccgt ggcgccctcg gacgccatcc
       61 aggagaagaa gcctgccgga cccgtggaag cgccgcccgc cccctcggac ctggtgatct
      121 tcatgtcgcc ggtggcctcc gagatcaagg tgggcgaagc ggtccgcatc accctcaccg
      181 tgagcggcgg caagggcctc agctcgggct ccctggagct gcgcctgccc ccgggcctcc
      241 gcctccaggg ggtgaccccc ggtgagttca tcaccggcga gagcggcagc ctcgagtcga
      301 tccccggcaa ggatggggtg ctgcgcctcg tcttcaagcg caaccccacg ggcacggaca
      361 gcggcccctt cgccaccctc gagctggtgg gcctcagcgc gggcaacgcc ccggtgctgc
      421 tccagagcgg gcagttcctc gtcggcgccg cgcccatctc gggccgctgg tccaacgccc
      481 tcgtgacggt gcagtgaagc gccaggccgg attcaccctg atggagctcg tggtcaccgc
      541 cacggtgctg gtgatcctgg cctcggccac ggtgcccctg gtgcggaacg gcctcaagcg
      601 gcagcaggag ctggagctgc gccgcacgct gcgcgagatg cgcatggcca tcgacgagta
      661 caagaagcag gccgagcagc agaagatcaa ggccccaccc gtcgacgcga acttctatcc
      721 ggagagcctg gagcttcttg tggagggcgt gcccgtggcg ggctcggcca gccggaagat
      781 ccggttcctg cggcgcatcc cggtggaccc cctcacgggc aaggcggaat ggggcctccg
      841 cagctccaat gacgatccca ccagcaccag ctggggcggc ggccacgtgc aggatgtcta
      901 cagcctctcc cagggcaccg gtatgaacgg catcccctac cgggagtggt agggccggct
      961 gcccgcgctg gatacccggc gccgtgcgcg agaatggtgg ttgcctcccc cggtgaaccg
     1021 cgctaggctt ggagttcggc acattccgga acctgcgggc cccgggttgt tctttcaagc
     1081 ggatatggcg gaattggtag acgcgctagt ttcaggtact agtgttcaca agacgtgggg
     1141 gttcgagtcc ctctatccgc accaccattc gacatgcacc cgcagggtgc gtggagaaca
     1201 ggaccgcatg cgaccaacgg gagcatggcg gtccgcaggc tgagcgccag cgaagccgag
     1261 gatgacggcc ggaggccgtc accaagatga agctgggaca agcacagcat ttgataaagg
     1321 cacctggcct ccaccaggtt cgacccccct tcggtacggg actggaggac gggtgacggg
     1381 cgatcccccg aaaaggagcc gacatggccc tgaacgtgga acagaagaag atcatcatcg
     1441 acgactacaa gcagcacgag tcggatacgg gttcgcccga ggtccaggtc gcgatcctga
     1501 ccaagcgcat caacgacctc accgagcact tcaagaccca caccaaggac taccacagcc
     1561 gccgcggtct gatgatcatg gtcggccagc gccgccgcct gctcgactac ctcaagaaga
     1621 agagca
//
LOCUS       DATGWW010000177         2233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_369595, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000177 DATGWW010000000
VERSION     DATGWW010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369595"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..260
                     /locus_tag="VK150_02600"
     CDS             <1..260
                     /locus_tag="VK150_02600"
                     /inference="COORDINATES: protein motif:HMM:NF013011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EscR/YscR/HrcR family type III secretion system
                     export apparatus protein"
                     /protein_id="HLP30222.1"
                     /translation="TKADVPMECLLPAFLISELKTAFEIGFMIFLPFLVVDMVVASIL
                     LSMGMMMLPPVVISLPFKVLLFVLVDGWYLIVGSLVRGYTG"
     gene            257..535
                     /gene="fliQ"
                     /locus_tag="VK150_02605"
     CDS             257..535
                     /gene="fliQ"
                     /locus_tag="VK150_02605"
                     /inference="COORDINATES: protein motif:HMM:NF013480.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HLP30223.1"
                     /translation="MNELLIAQIGKDALKTALMVAGPALLVSLVVGLLISVFQVVTSL
                     QDQTIAFVPKVIAVMVVVAISFPWMMSVMLHFTTRMFTEFNSVVRQLS"
     gene            543..1328
                     /locus_tag="VK150_02610"
     CDS             543..1328
                     /locus_tag="VK150_02610"
                     /inference="COORDINATES: protein motif:HMM:NF013478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="HLP30224.1"
                     /translation="MTPTLSDAGIWAFTGAKAGLWVLVLTRITGLLAAFPILGSEQMP
                     LQLRAALGALLATVLLPVIPVPPTLPTGVPELVGLMASELAIGLLLGTVVAWTLEAIA
                     FAGTLMDTQMGFSFVQFIDPATSQSASVSGSLMMQMAALLVFITGLHHQMILALVDSY
                     RVAPMGQGVPLQAMGLIAMIGQLLAKGFQLAFPVLAVLFLLDLIMGIAGKFMPQLQLL
                     QLSFPLKIAVGTVILGLLLREVGPWLVPLLERAPKLALKLLGG"
     gene            1335..>2233
                     /locus_tag="VK150_02615"
     CDS             1335..>2233
                     /locus_tag="VK150_02615"
                     /inference="COORDINATES: protein motif:HMM:NF013479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscU/YscU/HrcU family type III secretion system
                     export apparatus switch protein"
                     /protein_id="HLP30225.1"
                     /translation="MAHDPARTEKATPRRRQKARDEGSVPRSADFDGVILLWGNFFLF
                     MGLGGATLALLARQVAHFLQMARPGALAEAGLVTLLGDVLMILGRLLLPFLGVNLLLA
                     LATGFAQRGFSFSTKPLEPKFDRLNPAQGFQRLFSSRAMVDLVKSLAKFAIMAWVAYA
                     VLAPRIPALMDTLKLPLGQSLELFQSAVFALYRNVLLAMLVLAISDFAWQRSSWEKSI
                     RMTKQEIKDEGKDSEGNPEIKQKQKSIMMAAARRRMLAEVPKATVVVTNPTHVAVALQ
                     YDEKSSAPVCVAKGLDHLALKIR"
BASE COUNT          317 a          753 c          739 g          424 t
ORIGIN      
        1 agaccaaggc ggacgtgccc atggaatgcc tgctgccggc cttcctcatc agcgaactga
       61 agaccgcctt cgagatcggc ttcatgatct tcctgccctt cctggtcgtc gacatggtgg
      121 tggcgagcat cctgctcagc atgggcatga tgatgctgcc acccgtggtg atttcgctgc
      181 ccttcaaggt gctgctgttc gtcctcgtgg atggctggta cctcatcgtc gggtcgctgg
      241 tgcgggggta caccggatga acgagctgct gatcgcccaa atcggcaagg acgccctcaa
      301 gaccgccctg atggtggccg ggcccgcgct cctcgtctcc ctggtggtgg gcctgctgat
      361 ctccgtgttc caggtggtga cgagcctcca ggaccagacc atcgccttcg tgcccaaggt
      421 catcgccgtg atggtggtgg tggccatcag cttcccctgg atgatgtcgg tgatgctgca
      481 cttcacgacg cgcatgttca ccgagttcaa ctccgtcgtg cggcagctct cctgaggccg
      541 ccgtgacgcc caccctttcc gatgccggca tctgggcctt cacgggggcc aaggcagggc
      601 tctgggtgct ggtgctcacg cgcatcacgg gcctgctggc cgcgttcccg atcctcgggt
      661 cagagcagat gcccctccag ctgcgggcgg ccctgggcgc gctcctcgcc acggtgctgc
      721 tgccggtcat ccccgtcccg cccaccctgc ccacgggtgt gccggagctg gtgggcctca
      781 tggcctcgga gctggccatc ggtctgctgc tcggcacggt ggtggcgtgg accctcgagg
      841 ccatcgcctt cgccggcacg ctgatggaca cccagatggg cttctccttc gtgcagttca
      901 tcgatccggc cacctcccag agcgcgtcgg tgtcgggctc cctgatgatg cagatggccg
      961 cgcttctcgt ctttatcacg ggcctgcacc accagatgat cctggccctg gtcgacagct
     1021 accgcgtggc gccgatgggg cagggcgtgc ccctgcaggc gatgggcctc atcgcgatga
     1081 tcggccagct gctggccaag ggcttccagc tggccttccc ggtcctggcg gtgctcttcc
     1141 tgctcgacct gatcatgggc atcgcgggca agttcatgcc gcagctccaa ctgctgcagc
     1201 tgagcttccc cctgaagatt gcggtgggca cggtgatcct cggcctcctg ctccgggagg
     1261 tgggcccctg gctggtgccg ctgctggagc gcgccccgaa gctggccctg aagctgctgg
     1321 gaggctgagg accgatggcc cacgatcccg cccgtactga gaaggccacc ccccggcggc
     1381 gccagaaggc ccgggacgaa ggctcggtcc cccgcagcgc ggatttcgac ggcgtcatcc
     1441 tgctgtgggg gaacttcttc ctgttcatgg ggctgggcgg ggccaccctc gcgctgctgg
     1501 cccggcaggt ggcccacttc ctccagatgg cgcggcccgg ggcgctggcg gaagccggcc
     1561 tagtgaccct gctgggagac gtgctcatga tcctggggcg cctgctgctg cccttcctgg
     1621 gcgtgaacct gctgctggcc ctggccacgg ggttcgccca gcgcggtttc agcttcagca
     1681 ccaagcccct cgagccgaag ttcgaccgcc tgaatcccgc gcaggggttc cagcggctgt
     1741 tctcctcgcg ggccatggtg gatctggtga agagcctggc caagttcgcc atcatggcct
     1801 gggtggccta tgcggtgctg gcgccgcgga tcccggccct gatggacacg ctgaagctgc
     1861 cgctggggca gtccctggag ctgttccaga gcgcagtgtt tgccctctac cgcaatgtcc
     1921 tgctggccat gctcgtgctg gccatctccg acttcgcctg gcagcgcagc tcctgggaga
     1981 agagcatccg gatgaccaag caggagatca aggacgaagg taaggattcc gaaggcaatc
     2041 ccgagatcaa gcagaagcag aaatccatca tgatggccgc cgcgcggcgg cgcatgctgg
     2101 cggaagtccc gaaggccacc gtggtggtga cgaaccccac ccacgtggcg gtggcgctgc
     2161 agtacgacga gaagtcctca gccccggtct gcgtggcgaa gggcctcgac catctggcgc
     2221 tgaaaatccg cga
//
LOCUS       DATGWW010000178         2696 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_13892, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000178 DATGWW010000000
VERSION     DATGWW010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2696
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13892"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..903
                     /locus_tag="VK150_02620"
     CDS             202..903
                     /locus_tag="VK150_02620"
                     /inference="COORDINATES: protein motif:HMM:TIGR02453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2461 domain-containing protein"
                     /protein_id="HLP30226.1"
                     /translation="MATRAIRFDMENPLGPGLFRFLKDLKAHNDRAWFQANKARYEAE
                     ARDPVLRLIAGCTSPLAAVSRHVEADPRPVGGSLFRIYRDTRFSKDKTPYKTHLGVNF
                     RHRSAAAGGVHGPGFYLHLEPGGCFAGGGLWHPEPEALFKVRQAICARSSTWKTLRAS
                     GLEIEGEALKRVPQGFDAEHPCAEDLKFKDFYTATAFTNAEVAAPDFPDALMDAFRRA
                     SPLVAFLCKALDLPF"
     gene            complement(915..1961)
                     /locus_tag="VK150_02625"
     CDS             complement(915..1961)
                     /locus_tag="VK150_02625"
                     /inference="COORDINATES: protein motif:HMM:NF013939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /protein_id="HLP30227.1"
                     /translation="MRIGILGFGRFGRALAALLHDAGHAYRAWDPVADIPAERRAASL
                     RDLVDAHEALVLAVPIPALGGALAALRPYLRPDHLLFDVGSVKVGPCALLDQHLGATI
                     PHAGTHPLFGPVSLARAERPLRVVLCASPRHPGAADRVEALFRSLGCEVLRQSPEDHD
                     RVMATTHALTFFIAKGLLAVGAGAELPFTPPSFHAIARTLESVREDAGHLFAALQNEN
                     PFAAGAREGLLEALAAIHQSLAEAVQSGGGGEQLAIPDLGSRSPALQEARDHIDALDQ
                     ELVALLARRTDLVLRAGRAKAELGLPVHDPEREAAQLQARRAWAEAAGLSPQGIEDVF
                     RAVLRSSRSAQGGG"
     gene            complement(1992..2222)
                     /locus_tag="VK150_02630"
     CDS             complement(1992..2222)
                     /locus_tag="VK150_02630"
                     /inference="COORDINATES: protein motif:HMM:NF024590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HLP30228.1"
                     /translation="MRIEVLGSGCAKCKLLAERAEEAAKGLGAEYTLVKVTEYPDIVA
                     RGVMSTPGLVVDGVVKSQGHVPTVAAIQALLR"
     gene            complement(2232..>2696)
                     /locus_tag="VK150_02635"
     CDS             complement(2232..>2696)
                     /locus_tag="VK150_02635"
                     /inference="COORDINATES: protein motif:HMM:NF015715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HLP30229.1"
                     /translation="VLTVPFEASAGGKGPAGFAARMELALQGTRDIVGKVWPFVVAGI
                     AVGAFLHGYAPAELLARFMGKSAWWSVPLAVLIGVPLYANAAGIIPIVQVLLAKGAAL
                     GTALAFMMAVTGLSLPETVILRKVLKPRLLAVFLGIVSVGIVLTGFLFNLLL"
BASE COUNT          419 a          964 c          958 g          355 t
ORIGIN      
        1 tccctcggcg tacggcgcct cgcgggcagc cggctcttct ggcccgagga acgacccgac
       61 gtgatcatcg aggaggcgcg acgcctgtgg gagacggcct gaggctggaa gcgacctcga
      121 ccccagggcc gcgcctccgc cgaaagggtg gggttccgga tgcgctggtt ctactctgga
      181 ggcacacgac cggaggccgg gatggcgacg agggcgatcc gcttcgacat ggagaatccg
      241 ctggggccgg gactcttccg attcctgaag gatctgaagg cacacaatga ccgggcctgg
      301 tttcaggcga acaaggcccg atacgaagcc gaggcccgcg atccggtgct gcgactcatc
      361 gcaggctgca cgagccccct ggccgccgtc agccggcacg tcgaggccga cccccggccc
      421 gtgggcggct ccctcttccg catctaccgc gacacccgct tcagcaagga caagacgccc
      481 tacaagaccc acctgggcgt caacttccgg caccgctccg cggcggccgg aggggtgcac
      541 gggccggggt tctacctcca cctcgagccc ggcggctgct tcgcgggcgg tggcctgtgg
      601 caccccgagc ccgaggcact gttcaaggtg cggcaggcca tctgcgcccg gtcctcgacc
      661 tggaagacac tgcgggcctc ggggctggag atcgaaggag aggccctcaa acgggtgccc
      721 cagggtttcg acgccgagca cccttgtgcc gaggacctca agttcaagga cttctacacg
      781 gccacggcct tcaccaacgc cgaagtcgcg gccccggatt ttcccgacgc cttgatggac
      841 gccttccggc gggcatcgcc cctggtcgcc ttcctgtgca aggccctgga tctgcccttc
      901 tgacccgggc tggctcagcc cccgccctgg gcggatcgcg aagaccgcag cacggcccgg
      961 aacacatcct cgatcccctg cgggctcagc ccggccgctt ccgcccaggc tcggcgcgcc
     1021 tgtagctgcg cggcttcgcg ctcggggtcg tggacgggca ggcccagttc ggccttggcc
     1081 cggccagcgc ggagcaccag gtcggtacgg cgcgccagga gggccaccag ctcctggtcc
     1141 agggcgtcga tgtggtcgcg ggcttcctgc agggccgggg accggctgcc caggtcggga
     1201 atggcgagct gctcgcctcc gccaccgctc tgcaccgcct cggcgaggct ctggtggatg
     1261 gcggcgagcg cctccagcag gccctcccga gccccggcgg cgaaggggtt ctcgttctgc
     1321 agggccgcga agaggtggcc ggcgtcctcc cgcacggatt cgagggtgcg ggcgatggca
     1381 tggaacgagg ggggcgtgaa gggcagctcg gcgccggccc ccacggccag gaggcccttg
     1441 gcgatgaaga aggtgagggc gtgggtggtg gccatcaccc ggtcgtggtc ctcggggctc
     1501 tgccgcagca cctcacagcc aagactccgg aagagcgcct ccacgcggtc ggcggcgccc
     1561 gggtgccgcg gcgaggcgca gagcaccacg cggaggggcc gctcggcccg ggcgaggctc
     1621 acagggccga acagcggatg ggtgcccgcg tgggggatgg tcgcgccgag atgctggtcc
     1681 agcagcgcac agggacccac cttcacgctg cccacgtcga agagcaggtg gtcgggccgc
     1741 aggtatgggc ggagggccgc cagcgccccg cccagggccg gaatgggcac ggccagcacc
     1801 agggcctcgt gggcgtccac caggtcgcgc aggctggccg cccggcgctc cgcgggaatg
     1861 tcggccaccg ggtcccaggc ccgataggca tggccggcgt cgtggagaag cgcggcgagc
     1921 gccctcccga agcggccaaa acccaggatg ccgatgcgca tgggagtcct cagggaaacg
     1981 gagaggagat cctaccgcag cagggcctgg atggcggcca cggtgggcac gtggccctgg
     2041 ctcttcacga cgccgtccac cacgagcccg ggcgtggaca tcacgccgcg ggcaacgatg
     2101 tcggggtact ccgtgacctt caccagcgtg tactccgcgc ccagaccctt ggcggcctcc
     2161 tccgcgcgct ccgccagcag cttgcacttg gcgcagccgc ttcccagcac ctcgatcctc
     2221 atggttcctc cctacagcaa caggttgaac aggaatccgg tcagcacgat gcccacggac
     2281 acgatgccca ggaagaccgc gagcagccgg ggcttgagca ccttccgcag gatcacagtc
     2341 tcggggagtg aaagccccgt taccgccatc atgaacgcca gggccgtgcc cagggctgcg
     2401 cccttggcga ggagcacctg cacgatgggg atgatgccgg cggcgttcgc gtagagcggc
     2461 acgccgatga gcaccgccag cggcacgctc caccaggcgg acttgcccat gaacctcgcg
     2521 aggagctccg ccggggcgta gccgtgcagg aaggcgccca cggcgatgcc cgccaccacg
     2581 aacggccaga ccttgcccac gatgtcccgg gttccctgga gggccagttc catccgcgcg
     2641 gcgaacccgg cgggcccctt gcccccggcg gaggcctcga agggcacggt cagcac
//
LOCUS       DATGWW010000179         2647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_369707, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000179 DATGWW010000000
VERSION     DATGWW010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2647
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369707"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1150
                     /gene="gpmI"
                     /locus_tag="VK150_02640"
     CDS             <1..1150
                     /gene="gpmI"
                     /locus_tag="VK150_02640"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR01307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HLP30230.1"
                     /translation="DQLIAMVKLAKQAGVNDIMIHAITDGRDTGQKSADGYLQWLTFQ
                     LRDCPLVTLGSVCGRYTAMDRDKRWERTEQAWRLYVDGEGAQQAPDALAAIAAAYGRG
                     ETDEFVAPTRLDAFQPIADGDGVLFFNFRADRARQMCHALVHPAFAGFAPKHRPAVKL
                     VTFTAYDGELDPYVAVAYPPQVLDHILGELVSAQGWRQFRTAETEKYAHVTYFFNGGR
                     EVPFEGEARRLVPSPKVATYDLQPEMSLPDVSDGLEKAIRSGQYRLLVCNLANPDMIG
                     HTGDLAAAVTACEAVDAAVGRIADATLAMGGALLITADHGNCECMRDEGGNPHTAHTL
                     NPVPAVLVARGFEARQLRAGGALRDVAPTLLKLFGLDQPGTMDGTSLY"
     gene            1160..>2647
                     /locus_tag="VK150_02645"
     CDS             1160..>2647
                     /locus_tag="VK150_02645"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLP30231.1"
                     /translation="MTSSSRTPRVTPATFARGMRIFLVVFNLLIVAFAAWALIQARQH
                     EVARAEIATNNLAQVLEQSIKGTLRQIDMVLLSLKDQVEHASGGLRSPALAPFTATQF
                     SRLGLLEALCITDAEGRVLQGLPSDARPKLGGQEYFKALKENPGAGLVISRPTRSALN
                     GGWALTLARRLDAPDGSFAGAVCATLAIDRLAQAMALIDVGEGGSVSLRGQDLGLLAR
                     YPSFRGQDQMVGDTQVFGDYLAATTGSAPTAHFTAVSILDGDRRTYTLRKLDSPRFYI
                     LVGFSERDYLRAWRHQAAFAAAAVTALVGLTLAMGWLARSAWLRQLADQARLAAQEAK
                     YRLLAENATDLIWSMDPQGRLTYVSPSILRQRGWTPEEFLALDPEFRAVPGAGARSMQ
                     ARIAAAPSLPPGSQPFDDELIEARVRCKDGREIEVEAQYRLVWSEDGQLLGFQGVTRD
                     ITERKRMEAEREELIQELTKALADVRQLSGMLPICSQCKKVRDDQG"
BASE COUNT          415 a          981 c          859 g          392 t
ORIGIN      
        1 ggaccaactg atcgccatgg tgaaattggc caaacaagcc ggcgtcaatg atatcatgat
       61 ccacgccatc accgatggcc gcgacaccgg ccagaagagc gccgacggct acctgcagtg
      121 gctcaccttc cagctgcggg actgccccct ggtgaccctc ggctccgtct gcggccgcta
      181 caccgccatg gaccgcgaca agcgctggga gcgcacggaa caggcctggc ggctctacgt
      241 ggacggagaa ggcgcccagc aggcccccga cgccctggcc gccatcgccg cggcctatgg
      301 tcggggcgaa accgatgaat tcgtggcccc cacccgcctg gacgccttcc agcccatcgc
      361 ggacggcgac ggggtgctgt tcttcaactt ccgcgccgac cgggcccggc agatgtgcca
      421 cgccctggtg cacccggcct tcgcaggctt cgccccgaag caccgcccgg cggtgaagct
      481 ggtgaccttc accgcctacg acggcgagct ggatccctac gtcgccgtgg cctatccgcc
      541 ccaagtcctc gaccacatcc tcggggagct ggtgagcgcg cagggttggc ggcagttccg
      601 caccgccgag accgagaagt acgcccatgt gacttacttc ttcaacggcg gccgcgaggt
      661 gcccttcgag ggcgaggcgc gccgcctggt gccctccccc aaggtggcca cctacgacct
      721 gcagcccgag atgagccttc cggacgtgag cgacggcctg gagaaggcca tccgctcagg
      781 ccagtaccgc ctgctggtgt gcaacctggc caacccggac atgatcggcc acacggggga
      841 cctggcggcg gccgtcaccg cctgcgaggc cgtggacgcc gccgtgggcc gcatcgccga
      901 cgcgaccctg gccatggggg gcgccctcct catcaccgcc gatcacggca attgcgagtg
      961 catgcgcgat gagggcggca atccccacac cgcccatacc ctgaatcccg tccccgccgt
     1021 gctggtggcc cgcggcttcg aggcccgcca gctccgcgcg ggcggcgcgc tccgcgacgt
     1081 ggcgcccacc ctcctgaagc tcttcgggct ggaccaaccc ggtaccatgg acggcacaag
     1141 cctgtactga cggatgtcca tgaccagcag cagccgaacc ccccgggtga cgcccgcgac
     1201 tttcgcgcgc ggcatgcgca tcttcctcgt ggtgttcaac ctgctgatcg tcgccttcgc
     1261 ggcctgggcc ttgatccagg cgcggcaaca cgaggtggcc agggccgaga tcgccaccaa
     1321 caaccttgcc caggtgctgg agcagagcat caaggggacc ctccggcaga tcgacatggt
     1381 cctgctctcg ctcaaggacc aggtcgagca cgcctctggt ggcctgcgaa gcccggcctt
     1441 ggcgcccttc accgccacgc agttcagccg cctgggtctg ctggaggccc tctgcatcac
     1501 ggacgccgag ggccgcgtgc tccaagggct tccctccgac gcccggccaa agctcggcgg
     1561 ccaggaatat ttcaaagccc tgaaggagaa tcccggggct ggtctcgtga tctcccgccc
     1621 cacccggtct gccctgaatg gaggctgggc cctcaccctg gcacgccgac ttgacgcccc
     1681 cgacggatcc ttcgccgggg cggtgtgcgc caccctcgcc atcgaccggc tggcccaggc
     1741 catggccctg atcgatgtgg gagagggggg ctccgtgtcc ctccggggcc aggatctcgg
     1801 gctcctggcc cggtacccca gcttccgggg ccaggatcag atggtcggcg acacccaggt
     1861 cttcggcgac tacctcgcgg ccacgacggg atcagccccc accgcccact tcaccgccgt
     1921 ctccatcctc gacggcgacc gccgcaccta cactctgcgc aagctggact cgccacggtt
     1981 ctacatcctg gtgggtttct cggagcggga ttacctgcgc gcctggcggc accaggctgc
     2041 gttcgccgcc gcggcggtca ccgccctggt ggggctcacc ctggccatgg ggtggctcgc
     2101 gcgctccgcc tggctgcgcc agttggccga ccaggcgcgc ctggccgccc aggaggcgaa
     2161 gtaccgactg ctcgccgaga acgccacgga cctcatctgg tccatggatc cccagggccg
     2221 actcacctat gtcagcccgt ccatcctccg gcagcgtgga tggacgccgg aggagttcct
     2281 ggcgctcgat cccgaattcc gggccgttcc cggcgcgggc gcccgatcca tgcaggcacg
     2341 gatcgccgcg gccccctcgc ttcccccggg ttcccagccc ttcgacgacg agctgatcga
     2401 ggccagggta cggtgcaagg atggccgaga gatcgaggtg gaggcccagt accggctggt
     2461 gtggtccgag gatgggcaac tgctggggtt ccagggcgtc acccgcgaca tcaccgagcg
     2521 caagcggatg gaagccgagc gggaggaact gatccaggag ctgaccaagg cgctggccga
     2581 cgtgcgccag ctcagcggca tgctgcccat ctgcagccag tgcaagaagg tccgtgacga
     2641 ccagggg
//
LOCUS       DATGWW010000180         2906 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_326285, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000180 DATGWW010000000
VERSION     DATGWW010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2906
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326285"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..1724)
                     /locus_tag="VK150_02650"
     CDS             complement(78..1724)
                     /locus_tag="VK150_02650"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HLP30232.1"
                     /translation="MAVLLAGNLILPLYYQEGRTAITALDYLCVHLLAFTTTALAWRR
                     ARREGPPAFYLLGLGAGLGSLQYLPTLFRLPNAAILGPAISIAGFLFLGAGFLWWPQQ
                     IRMPRDRMRVSLDGLSIALSVFALAWLAMGLLPWSSRTPRAVTVTYAIHISAALGVLS
                     LWLLQETRLMLPEQAPAKRFVRLAMVLLLARVSLAAFLKVLGHYQGYLAHGAEALHQV
                     ANVLLALAALSPPARPGQAPSGGARSHAWATVPSLLSLAVLLLLGLRIYFGGGEPPRP
                     LLGMGLALVLVVALRHGLLIRDLERFSRDLESRVEARTRELEQHHREALGDLRVRMMA
                     GLAAGLAHDLNNILGVIRLRLDLLRETSAPRQLENLEVLREASERAIAMTQRILSSGR
                     AENLSPMPFCLTDWMGTRSGLLRALLGPGQNLIIRSAPQVAVVADPQSLDQVLQNLVS
                     NARDAMGPAGTLTITLGAGPGQALVEVRDDGPGFPPEHMARLFEPFFTTKPSGTGLGL
                     ATVRNLVHQNRGTIRVESGEGQGTAFFIGLPAATEPPLLA"
     gene            complement(1891..>2906)
                     /gene="rsgA"
                     /locus_tag="VK150_02655"
     CDS             complement(1891..>2906)
                     /gene="rsgA"
                     /locus_tag="VK150_02655"
                     /inference="COORDINATES: protein motif:HMM:TIGR00157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HLP30233.1"
                     /translation="GIEAHDPLALLRLPDPAPWMHLPEATLIQRHSQWVDLELADRTL
                     LRATLSGKLKGVRLVCGDKVRYSVVPVEPDDPRFPASVNTRGEGGSPEAQVVAVMPRT
                     SLLKRGGGDDREPWQLICANADELWVCAAVVDPPLRPGLLERAQVLALDAGLSFRVLV
                     TKRDRASRKDTLPELDPLREQGVAIHETSALKGEGIEPLRGLLKDRVVVLLGHSGVGK
                     STLVNVLHPEAALKTGGLTRFGTGKQTTTAARWLPLATGGTLVDTPGIRSLSVRGFDR
                     ALLGQVFPEFPPEVMEDPTALDAEDEDTLDRLELAYPERLQSLQRLWLEMEGRNPNQN
                     VWR"
BASE COUNT          457 a          973 c         1092 g          384 t
ORIGIN      
        1 gggaacaggg tgccgaagac cgcgccgtag gcgagtccga gcagcctgga atcggattgc
       61 atgcgatctt gcatgcctca ggctagcagc gggggttccg ttgcggcggg caggccgatg
      121 aagaaggccg tgccctggcc ctcgccgctt tccacccgga tggtgccgcg attctggtgc
      181 accaggtttc gcacggtggc gaggccgaga ccggtgcccg agggcttggt ggtgaagaaa
      241 ggctcgaaca ggcgcgccat gtgttcaggc ggaaacccgg gaccgtcatc ccgcacttcc
      301 accagggcct ggccgggtcc ggcaccgagc gtgatggtca gggtccccgc cggtcccatg
      361 gcatcccggg cgttggagac gagattctgg aggacctggt ccagggactg ggggtcggca
      421 accaccgcga cctgcggcgc cgaccggatg atcaggttct ggccggggcc cagcagggcc
      481 cgcagcaggc cgcttcgcgt ccccatccag tccgtgaggc agaagggcat gggggacaga
      541 ttctccgcgc ggcccgagga aaggatgcgc tgggtcatgg cgatcgcccg ttcagaggct
      601 tcccggagca cctccaggtt ctcaagctgg cggggcgcgg aggtctcgcg gagcaggtcg
      661 aggcggagcc ggatgacacc caggatgttg ttcaggtcgt gggccaggcc cgcggccagg
      721 cccgccatca tccggaccct gaggtcgccg agggcctccc ggtgatgctg ttcaagctcc
      781 cgggtgcgcg cttccacgcg ggactccagg tcccgcgaga acctttcgag gtcgcggatg
      841 agcagaccat gccgcagggc cacgaccagc accagcgcga gccccatgcc cagcagggga
      901 cggggcggct ccccgccgcc gaagtagatc cgcaggccca gcagcaggag gacggcgagg
      961 gagaggagcg aggggaccgt ggcccacgca tgggatctgg cgccgccgga aggagcctgg
     1021 cctggcctcg cgggcgggct gagggcggcc agggcgagca ggacgttggc cacctggtgc
     1081 agggcttcag ctccatgggc caggtagccc tggtagtggc cgagcacctt caggaaggcg
     1141 gcgagcgaga cccgggccaa cagcaggacc atggccaggc ggacgaaccg cttcgccggg
     1201 gcctgctcgg ggagcatcag gcgcgtctcc tggagcagcc agagggacag cacccccagg
     1261 gccgcgctga tgtggatggc gtaggtgacc gtcacggccc ggggcgtgcg gctggaccag
     1321 ggcagcaggc ccatggcgag ccaggccagc gcgaacacgg agagggcgat ggacaggccg
     1381 tcgaggctca cccgcatccg gtcccgcggc atccggatct gctggggcca ccagaggaat
     1441 cccgcgccca ggaagaggaa acccgcgatg gagatcgccg gccccaggat cgccgcgttg
     1501 ggaagccgga agagcgtcgg caggtactgc aggctgccca gcccggcccc gaggcccagc
     1561 aggtagaagg ccggcggacc ctcgcgccgc gcgcggcgcc aggcaagggc ggtggtcgtg
     1621 aaggccagca ggtggacgca caggtagtcc agggccgtga tggcggtccg gccttcctgg
     1681 tagtacaggg gcaggatcag gttccccgcc agcaggacgg ccaagcccag gatgaccccc
     1741 aggtgcgggc gccaggatgc aggccaggcc tggggcggcc ccgggggtgc ggacatcccc
     1801 cgagtgtcac cggccgcggc ctccctgaca atctcttaac agccgggccc ggtgcagttg
     1861 tcgcccgaat cacagtgcct ggcggacggt ctaccgccac acgttctggt tcgggttccg
     1921 gccttccatc tccagccaga gccgctggag gctctggagg cgctcggggt aggccagctc
     1981 caggcggtcc agcgtgtcct cgtcctcggc atcgagggcg gtggggtcct ccatcacctc
     2041 cggggggaac tcggggaaca cctggcccag cagagcccgg tcgaagcccc gcacgctcag
     2101 gctgcggatg cccggcgtgt ccaccagggt gccgccggtg gcgaggggca gccagcgcgc
     2161 cgcggtggtg gtctgcttgc cggtgccgaa gcgcgtgagg ccgccggtct tcagggccgc
     2221 ttcgggatgc aggacgttca ccagcgtgct cttccccacg ccgctgtgcc ccagcagcac
     2281 gaccacccgg tccttcagca ggccgcgcag gggctcgatg ccctcgccct tcagtgccga
     2341 ggtctcgtgg atggccacac cctgttcgcg cagggggtcc aattccggca gggtgtcctt
     2401 cctggaggcc cggtcgcgct tggtgacgag cacgcggaag gacaggcccg cgtccagggc
     2461 caacacctgg gcccgctcca ggaggccagg ccgcagaggg ggatccacca ctgcggcaca
     2521 gacccacagc tcatcggcat tggcgcagat cagctgccag ggctcgcggt cgtcgccgcc
     2581 gccgcgcttg agcaggctgg tccggggcat cacggccacg acctgggcct cgggcgagcc
     2641 gccctcaccc cgggtgttga cggaggcggg gaacctcgga tcgtcgggct ccaccggcac
     2701 gaccgagtac cgcactttgt ccccgcagac gagccggact cccttcagct tgccgctgag
     2761 ggtggcgcgc aggagggtgc ggtccgcgag ctcgagatcc acccactggc tgtgccgctg
     2821 gatcagcgtg gcctcgggca gatgcatcca gggcgccggg tccgggaggc ggaggagggc
     2881 caggggatca tgggcctcaa tgccgg
//
LOCUS       DATGWW010000181         1657 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_241529, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000181 DATGWW010000000
VERSION     DATGWW010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_241529"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /locus_tag="VK150_02660"
     CDS             <1..281
                     /locus_tag="VK150_02660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30234.1"
                     /translation="EALCMGVPAAVWGQNERQHTILSDLAMANGCFDLGVGPEADLAI
                     VREALAQWLGPEGQDNRQEQVRDGMALVDGMAASRVAQELWRLAECPA"
     gene            390..824
                     /gene="rplM"
                     /locus_tag="VK150_02665"
     CDS             390..824
                     /gene="rplM"
                     /locus_tag="VK150_02665"
                     /inference="COORDINATES: protein motif:HMM:TIGR01066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HLP30235.1"
                     /translation="MSTYFPKANDLKRQWFLVDATGIPVGRLSTAVADVLSGKNKPTW
                     TPFLDTGDHVIVINAEKAVLTGKKGVQKFYRRTTTQPGSMKEVRAEVMKTTFPERIIE
                     SAVKGMLPKGPLGRAMYRKLKVYAGPEHEQAAQQPQILTIQK"
     gene            838..1230
                     /gene="rpsI"
                     /locus_tag="VK150_02670"
     CDS             838..1230
                     /gene="rpsI"
                     /locus_tag="VK150_02670"
                     /inference="COORDINATES: protein motif:HMM:NF001099.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HLP30236.1"
                     /translation="MAISQNYGTGRRKSAAARAFLRPGTGKITVNGRTLESYFPNAVL
                     RMMVHQPLVLADLDGKFDMIISVCGGGPAGQASAIRMGISRALLGYNEQLKSLLRGAG
                     LLTRDPRMKERKKPGRKAARRRFQFSKR"
     gene            1384..>1657
                     /gene="rpsB"
                     /locus_tag="VK150_02675"
     CDS             1384..>1657
                     /gene="rpsB"
                     /locus_tag="VK150_02675"
                     /inference="COORDINATES: protein motif:HMM:TIGR01011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HLP30237.1"
                     /translation="MAAIQMKELLEAGAHFGHQTKRWNPKMKKFIFGARNSIYIIDLQ
                     KTLRLWNTAANFLTKAAGEGKNFLFVATKPQAQELIAEQAGRCGAFY"
BASE COUNT          301 a          601 c          501 g          254 t
ORIGIN      
        1 ccgaggcgct ctgcatgggc gtgccggcgg ccgtctgggg ccagaacgag cgccagcaca
       61 cgatcctctc ggacctggcc atggccaacg ggtgcttcga cctgggcgtg ggtcccgagg
      121 ccgacctcgc catcgtgcgc gaagccctgg cccagtggct gggccccgag ggccaggaca
      181 accggcagga gcaggtccgc gacggcatgg cgctggtgga tggcatggcc gcttcccgcg
      241 tcgcccagga attgtggcgg ctcgcggagt gcccggccta gaaatcccgg cttgaccccc
      301 tggccactca acgataagct ttcccttctg tgaactcgcc acccctgggg tggtgtcttt
      361 gcaggctgat cgtgatcccg gagcaggcca tgagcacgta cttcccgaaa gccaatgatc
      421 tcaagcgcca gtggttcctg gtggatgcca ccgggattcc cgtgggccgc ctcagcaccg
      481 ccgtcgcgga cgtcctgtct ggcaagaaca agccgacctg gacgcccttc ctcgacaccg
      541 gcgaccacgt catcgtcatc aacgccgaga aggcggtcct gaccggcaag aagggcgtgc
      601 agaagttcta ccgccgcacc accacccagc ccggctccat gaaggaagtc cgcgccgagg
      661 tgatgaagac caccttcccc gagcgcatca tcgagagcgc ggtcaagggc atgctgccca
      721 agggccccct cggccgggcg atgtaccgca agctgaaggt ctatgccggc cccgagcacg
      781 agcaggccgc ccagcagccc cagatcctga ccatccagaa gtagaggcga ggaccccatg
      841 gccatttccc agaactacgg aaccggtcgc cgcaagagcg cggccgcccg cgccttcctc
      901 cgccccggca ccggcaagat caccgtcaac ggccggacgc tggagagcta cttccccaat
      961 gccgtgctcc gcatgatggt ccaccagccc ctggtgctgg ccgacctcga cggcaagttc
     1021 gacatgatca tcagcgtgtg cggcggcggc cccgccggtc aggcctcggc catccgcatg
     1081 ggcatctccc gcgcgctgct gggctacaac gagcagctca agtccctcct gcgcggcgcc
     1141 ggtctcctga cccgcgaccc ccgcatgaag gaacgcaaga agcccggtcg caaggccgcc
     1201 cgtcgtcgct tccagttcag caagcgctag tcgttctctg gaagggggag ccactcggtt
     1261 cccccttctg cttttccggt tcacgggatt ccgtggacga ttcgggccga gggatccaac
     1321 ccgacgcctt tcatcccacc cgcggcgtcc ttcaaccatc gccgcttgac cagggaggcc
     1381 agcatggctg ccatccagat gaaggaactt ctcgaggccg gtgcccactt cggacaccag
     1441 accaagcgtt ggaacccgaa gatgaagaag ttcatcttcg gcgcccgcaa cagcatctac
     1501 atcatcgacc tccagaagac cctgcgcctc tggaacaccg ccgcgaactt cctgaccaag
     1561 gccgccggcg aggggaagaa tttcctcttc gtggccacca agccccaggc ccaggagctc
     1621 atcgccgagc aggccggccg ctgcggcgcc ttctacg
//
LOCUS       DATGWW010000182         2223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_422794, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000182 DATGWW010000000
VERSION     DATGWW010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2223
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422794"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..942
                     /locus_tag="VK150_02680"
     CDS             <1..942
                     /locus_tag="VK150_02680"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HLP30238.1"
                     /translation="LAVLAEDTIDLILCDIQMPGASGLDLVKAIQPRIPDTSVIMVSS
                     LEDAETAIECLQQGAFGYVLKPYQPREILVQVNGALRRRMLEIAFRDREAQLARKVRE
                     QTLEIRQSREEIALRLIAASEHRDNETGMHVRRIGLYAADMARLLGWSEEAIDTIQSA
                     APMHDIGKIGVPDAILQKPSALTEDEWVTMKRHTSMGATILKGSTVPFIRMGARIAIG
                     HHEKWDGSGYPKGIQGEAIPMEARITALVDVFDAASNRRHYKEPWPEDQVVELIRKGR
                     AAHFDPQLVDLFLANLHRFRAILQDNPDESHDEDPGI"
     gene            complement(1164..>2223)
                     /gene="nrfD"
                     /locus_tag="VK150_02685"
     CDS             complement(1164..>2223)
                     /gene="nrfD"
                     /locus_tag="VK150_02685"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HLP30239.1"
                     /translation="FYIGNFTFLVGVAAAAIMLVIPAYIYDWEPIKEITILGEMLAIA
                     ALVMCLGFVMVDIGRPDRFWHIMPLVGRLNWPQSMLAWDVIVLNLYLLLNWFVVTYLL
                     FCAYTERHYVKKLVLPLVLLSIPMAVSIHTVTAYLYNGLAARPFWNSAILAPRFLASA
                     FCSGPAILLILLQVLRRTTKLSIKDEAIFKIAELMAYTMGFNLFLTAAEAFKELYSGT
                     EHMVYFQYLLFGLKGHTTLVPFAWASILCGLAAFILFLVPKTRTNWVTLNLGCVLIYA
                     SVYIEKGMGLIIPGLTPDVLGDIYVYKPSYTEIAVAAGIFAIGFLVFTLMLKAAVPMM
                     LGEFTLTRGRRAAEADPT"
BASE COUNT          429 a          702 c          762 g          330 t
ORIGIN      
        1 ctggccgtgc tcgccgagga caccatcgac ctgatcctct gcgacatcca gatgccgggc
       61 gcctcgggcc tcgacctcgt gaaggcgatc caaccgcgca tcccggacac ttccgtgatc
      121 atggtgagct ccctggagga tgcggagacc gccatcgaat gcctgcagca gggcgccttc
      181 ggctacgtgc tcaagcccta ccagccccgg gagatcctgg tgcaggtgaa cggcgcgctg
      241 cgccgccgga tgctggaaat cgccttccgc gaccgcgagg cgcagctggc ccggaaggtg
      301 cgggagcaga cgctggagat ccgccagtcc cgggaggaga tcgcgctgcg gctcatcgcc
      361 gccagcgagc accgcgacaa cgagacaggc atgcacgtgc gccgcatcgg gctctatgcc
      421 gccgacatgg cgcgcctcct tggctggagc gaggaggcca tcgacaccat ccagtccgcc
      481 gcgcccatgc acgacatcgg gaagatcggc gtgcccgacg ccatcctcca gaaacccagt
      541 gccctcacgg aggacgagtg ggtgaccatg aagcggcaca ccagcatggg cgccaccatc
      601 ctcaagggct ccaccgtgcc cttcatccgc atgggcgcgc gcatcgccat cggccaccac
      661 gagaagtggg acggctccgg ctatccgaag ggcatccagg gcgaggcgat ccccatggaa
      721 gcccgcatca cggccctggt ggatgtcttc gacgccgcca gcaaccggcg ccactacaag
      781 gaaccctggc ccgaggatca ggtggtggag ctgatccgga agggccgggc cgcgcacttc
      841 gacccgcagc tggtggacct gttcctggca aacctgcacc ggttccgggc catcctccag
      901 gacaatcccg acgaatccca cgatgaggat cccggcatct gaggtgaccc gttgtcaggg
      961 attcaccgat tcaccacgga ggcacggagg gtgcggagag gctcggatgg acgagcttcg
     1021 cgagaccagc gcggactggc ggggccgcat gcggcccctg ggcgcgccgc gcccagcgat
     1081 gctggacggg aggggcacgg agcctccgtg ccgtctctgt gagttccgtg tctccgtggt
     1141 gaatctctaa aaccttgtcg cgctcaggtc ggatccgcct cggcggcgcg gcggcccctg
     1201 gtgagggtga actcgccgag catcatcggc actgcggcct tcagcatgag ggtgaagacc
     1261 aggaagccga tggcgaagat gcccgccgcc accgcgatct ccgtgtacga cggcttatag
     1321 acgtagatgt cgcccagcac gtccggcgtg agcccgggga tgatgagccc catgcccttc
     1381 tcgatgtaga cgctggcgta gatcaggacg cagccgagat tcaaggtcac ccagttggtg
     1441 cgggtcttcg gcaccaggaa caggatgaag gccgccaggc cgcagaggat cgacgcccag
     1501 gcgaagggca cgagggtggt gtggcccttc aggccgaaga gcaggtactg gaaatacacc
     1561 atgtgctcgg tgccggagta gagctccttg aaggcctccg ccgccgtgag gaagaggttg
     1621 aagcccatgg tgtaggccat aagctccgca atcttgaaga tggcctcgtc cttgatgctc
     1681 agcttggtgg tcctgcgcag cacctgcagc aggatgagca gaatggccgg ccccgagcag
     1741 aaggccgagg cgaggaagcg gggcgcgagg atggccgagt tccagaaggg gcgggcggcc
     1801 aggccgttgt agaggtaggc cgtcaccgtg tggatgctca cggccatggg gatggagagc
     1861 agcacgaggg gcagcaccag cttcttcacg tagtgccgtt cggtgtaggc gcagaagagc
     1921 aggtaggtga ccacgaacca gttcagcagc aggtagaggt tcagcacgat cacgtcccag
     1981 gccagcatgg actggggcca gttcagtcgg cccaccaggg gcatgatgtg ccagaagcgg
     2041 tcgggacggc cgatgtccac catcacgaag ccgaggcaca tcactagggc cgcgatggcc
     2101 agcatctcgc ccaggatggt gatctccttg atgggctccc agtcgtagat gtaggcgggg
     2161 atcaccagca tgatggccgc cgcggccacg cccaccagga aggtgaagtt gccgatgtag
     2221 aag
//
LOCUS       DATGWW010000183         1887 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_369893, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000183 DATGWW010000000
VERSION     DATGWW010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369893"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..959)
                     /gene="hflX"
                     /locus_tag="VK150_02690"
     CDS             complement(<1..959)
                     /gene="hflX"
                     /locus_tag="VK150_02690"
                     /inference="COORDINATES: protein motif:HMM:TIGR03156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HLP30240.1"
                     /translation="MDDSPLRCLLIARQGPEDREDRIQDHLLELAELARSCGFEVQTR
                     RILKRPQIAPRTFYGSGQLEALAEEAARQGTRHLICDDELSGSQVNAIEKLTGLICLD
                     RTGLILSIFEQRAQTREAKAQVELARCEYELPRLKGAWTHLERQGGGVGLRGGPGETQ
                     IEVDRRMIRTRISQLKRELTHLEQVRETQRQGRPKGLPRVALVGYTNAGKTSLLKALT
                     GEGEPRDLLFATLDTTTRKAWLGQDFDPDTGEGSLEPKHCLVADTVGFIRKLPHQLVA
                     AFRSTLGEVRTADALLVVADAAHPDLEDHLKVVGATLREIGCEP"
     gene            1046..>1887
                     /locus_tag="VK150_02695"
     CDS             1046..>1887
                     /locus_tag="VK150_02695"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HLP30241.1"
                     /translation="MFGQKKAKPSEGSDLVLAYLEEAQRVRATITLVDGRNRETSGTL
                     GAVMEDKITLSTQGPLLAEKGQDLSLLFILDGLRFKAVGRLLEVKPGSATLELPASIS
                     LAERRKKPRARLNAREAVTATALTGLFDGVGLNGTVENISEGGICIRVDRAMDVKTQR
                     KMHMGANILEVGQAFMLIKLSKIPKCPPLELAGTVAWLDATHGLLVGLAFEPGKESLL
                     GPVRSLVASRAGAIPAGVPPKARRQIEEAPEEDEVPLHRPAPRKEPEPAPHPAPALPE
                     AAAPP"
BASE COUNT          287 a          659 c          653 g          288 t
ORIGIN      
        1 ggctcgcagc cgatctcgcg cagcgtggcg cccaccacct tgagatgatc ctccaggtcc
       61 ggatgggcgg cgtcggccac caccagcagg gcgtccgccg tgcgcacctc gcccagggtg
      121 ctgcggaagg ccgccaccaa ctggtggggc agcttgcgaa tgaaaccgac ggtgtcggcc
      181 accaggcagt gcttgggctc gaggctgccc tccccggtgt cgggatcgaa atcctgaccc
      241 agccaggcct tgcgggtggt ggtgtcgagg gtggcgaaga ggaggtcgcg gggctcgcct
      301 tcgcccgtga gggccttcag gaggctggtc ttgccggcat tggtgtaacc caccagcgcc
      361 acccggggca ggcccttggg ccggccctgg cgctgggtct cccgcacctg ctccaggtgg
      421 gtgagctccc gcttgagctg gctgatgcgg gtgcggatca tgcggcggtc cacctcgatc
      481 tgggtctcgc cgggtccgcc acggaggccc acgccgccgc cctggcgctc caggtgggtc
      541 caggcgccct tcaaccgggg cagctcgtac tcgcagcggg ccagctccac ctgggccttg
      601 gcctcccggg tctgggcccg ctgctcgaaa atgctgagga tgaggccggt gcggtccagg
      661 cagatgagcc ccgtgagctt ctcgatggcg ttcacctggc tgccgctgag ctcgtcgtca
      721 cagatgaggt ggcgcgtgcc ctggcgcgcc gcctcctcgg cgagggcctc cagctggccg
      781 gacccgtaga aggtcctcgg ggcgatctgt ggacgcttca agattcgcct tgtctgcact
      841 tcgaacccgc agctccgggc cagttccgcc agttccagca ggtggtcctg gatgcggtcc
      901 tcccggtcct cgggtccctg gcgggcgatg agcaggcagc gaaggggcga atcatccata
      961 cggtcaagct gcctgccccg agggcaataa tcaagcccca gccgtgcgag tcgatgcgat
     1021 aggcgaggta cctgtctcca tggcgatgtt cggacagaaa aaagccaagc cgtcggaggg
     1081 atccgacctg gtgctggcct acctggagga agcccaacgg gtgagggcca cgattacgct
     1141 cgtggacggg cgcaaccgtg aaacctccgg caccctcggt gcggtgatgg aggacaagat
     1201 cacgctcagc acccagggcc ccctgctcgc cgagaagggg caggacctga gcctcctgtt
     1261 catcctcgac ggcctgcgct tcaaggcggt cggccgcctc ctcgaggtca agccggggtc
     1321 ggccaccctg gagctgccgg catccatcag cctggctgag cggcggaaga agccccgcgc
     1381 ccgcctgaac gcccgggagg ccgtcaccgc caccgccctc accggtctct tcgacggggt
     1441 gggcctgaac ggcaccgtgg agaacatctc cgaaggcggc atctgcatcc gggtggaccg
     1501 ggccatggat gtgaagacgc agcggaaaat gcacatgggg gcgaacatcc tcgaggtggg
     1561 ccaggccttc atgctcatca agctttccaa gattccgaag tgccccccgc tggaactcgc
     1621 cggcacggtg gcctggctgg atgccaccca cggcctgctg gtgggcctcg ccttcgagcc
     1681 cggtaaggaa tccctgctgg ggccggtgcg aagcctggtt gccagccgtg ccggtgccat
     1741 ccccgcgggc gtgcccccca aggcccgtcg gcagatcgaa gaggccccgg aagaagacga
     1801 ggtccccctg caccgcccgg caccccggaa ggagcccgag cctgcgcccc accccgcgcc
     1861 ggccctcccc gaggccgcgg cgccgcc
//
LOCUS       DATGWW010000184         3676 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_104121, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000184 DATGWW010000000
VERSION     DATGWW010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3676
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104121"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            213..3035
                     /locus_tag="VK150_02700"
     CDS             213..3035
                     /locus_tag="VK150_02700"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HLP30242.1"
                     /translation="MPFSRRFTLPLCGALAFGLVAGEAPRPAAPAAKVASKGKITKAI
                     AAPVLAAPVKVTTVEGITEYRLANGLRVLLFPDASKPTITTNITYLVGSRHENYGETG
                     MAHLLEHMVFKGTPKHPNVPQLLNELGGDFNGTTWLDRTNYYISFPATEENLAKALDL
                     EADRMQNSHFNAETLWGKDGKSGEMTVVRNEFETGENNPFRVTLQRIQSVAFDWHNYG
                     KSTIGARTDIEKVNVDHLRAFYHRYYAPDNAILVVAGKFDEAKTLQRINQAFGPLQNP
                     QRTLEPTYTQDPVQDGERSVSIRRVGGTPLLMVGYHIAPGFHPSRSQLDLAASILADA
                     PSGRLYKALVETKLAAQVFPIVFPTLEPGLMMFGVALAKDGDPEQVKTVLLKELEDLK
                     AKPFTQAELDRAQAKARKMVDQTFADTKNLAVALSDSMASGDWRHLFFDRDWTLAAKL
                     DQVQGAAVSVFKASNRTLAQYIPTEAPDRAEVPAASDIAALVKDYKGKEVIAQGEAFD
                     ASPENVDARTVRFTAPNGLKGALLSRKTKGAMATLQLTLRFGREAELMDRKAVPAMTG
                     AMLMRGTTKHTRQELTDTFDKLRAQVMVNGGPASATATLTVPRENLAAALRLVAEVLR
                     EPAFPASELETLVKQQVTGIESQRNEPQAKVIEFMGQAFDPYPAGHPSAYRGPDARLE
                     EFKTLKAEDLKAFHQAFYGANHAGFAASGDFDAAELQKLVTELFGSWTSPAAYERLAA
                     RLKVPAAQRKDIETPDKKGAFFLVQSRWAMKDTDADYPAFLMANQILGGGALKSRLAD
                     RLRQKEGFSYGAGAFANVGNLDPVTSWQAYAIYAPENAAKLEAAFDDEIQKALKGGFT
                     QEELDFARTTWLQGEKTERQEDRAIATWLGRSLYLGRSVRFEAELEAKVQALKLDEVN
                     AALRKYLHPETFVVVKAGDFAKAPKK"
     gene            complement(3105..>3676)
                     /locus_tag="VK150_02705"
     CDS             complement(3105..>3676)
                     /locus_tag="VK150_02705"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HLP30243.1"
                     /translation="AHNYRVAWMSSRLAEAAGIHGAQMQALIAGSFLHDAGKIGIPDA
                     ILLKPGKLTAEEMGLMRGHVHMGEEIVSGARWLDGAREVVAGHHEKWDGSGYPRGLAG
                     EAIPLAARVFAIADVFDALCSKRPYKEPLSFDSAMEILQAGAGNHFDPTLLEAFASIA
                     KDLYDTSLHASEEEARQLLETVLRRYFEI"
BASE COUNT          673 a         1361 c         1114 g          528 t
ORIGIN      
        1 ccccatccca gtgcccaggg cctcctgcag ggtgcgccca atcgtggcaa gggcttgaaa
       61 ctggatgatc tgcgtgagca atggcagcaa cggctcatcg ccctgctggc cccttcttga
      121 caactcttaa caattcttaa cagggatggc cccggcagct ctcgtaagct gaggccttcc
      181 cctgcgggga tctttcacag cctggaggca ccatgccctt ctcccgtcgt ttcacgctgc
      241 ccctgtgcgg ggccctggct ttcgggctgg tggccggaga ggcccccagg cccgccgcgc
      301 ccgccgcgaa ggtcgcctcc aagggaaaga tcacgaaggc cattgctgcc ccggtcttgg
      361 ccgcccccgt caaggtgacg acggtggagg gcatcacgga gtaccggctg gccaacggcc
      421 tgcgcgtgct gctcttcccg gatgccagca agccgaccat caccacgaac atcacctacc
      481 tggtgggcag ccgccacgag aactacggcg agaccggcat ggcccacctg ctggagcaca
      541 tggtcttcaa gggcacgccg aagcacccca acgtgccgca gctgctcaac gaactgggcg
      601 gtgacttcaa cggcaccacc tggctggacc gcaccaacta ctacatctcc ttcccggcca
      661 ctgaggagaa cctggccaag gccctcgacc tcgaggccga ccgcatgcag aacagccact
      721 tcaacgccga gacgctgtgg ggcaaggacg gcaagagcgg cgagatgacc gtggtgcgca
      781 acgagttcga gacgggcgag aacaacccct tccgcgtgac cctccagcgc atccagtccg
      841 tggccttcga ctggcacaac tacggcaagt ccaccatcgg cgcccgcacg gacatcgaga
      901 aggtgaacgt cgaccacctc cgcgccttct accaccgcta ctacgcccca gacaacgcca
      961 tcctcgtggt ggccggcaag ttcgacgaag ccaagaccct ccagcgcatc aaccaggcct
     1021 tcggcccgct gcagaatccc cagcgcaccc tggagcccac ctacacccag gatccggtgc
     1081 aggacggcga gcgcagcgtc agcatccgcc gggtgggcgg cacgccgctg ctcatggtgg
     1141 gctaccacat cgcccccggc ttccacccca gccgcagcca gctggacctg gccgcctcca
     1201 tcctcgccga cgcccccagc ggccgcctct acaaggccct ggtggagacg aagctggccg
     1261 cccaggtctt ccccatcgtg ttccccaccc tcgagcccgg cctgatgatg ttcggcgtgg
     1321 cgctggccaa ggatggcgac cccgagcagg tcaagaccgt gctgctgaag gagctggagg
     1381 acctcaaggc caagcccttc acccaggccg agctggaccg ggcccaggcc aaggcgcgca
     1441 agatggtcga ccagaccttc gccgacacca agaacctggc ggtggcgctg agcgacagca
     1501 tggcctccgg cgactggcgc cacctcttct tcgaccgcga ctggaccctc gccgccaagc
     1561 tcgaccaggt ccagggcgcc gcggtgtccg tcttcaaggc cagcaaccgc accctggccc
     1621 agtacatccc caccgaggcg cccgaccgcg cggaggtccc cgccgcctcc gacatcgcgg
     1681 ccctggtgaa ggactacaag ggcaaggagg tgatcgccca gggcgaggcc ttcgacgcca
     1741 gccccgagaa cgtggacgcc cgcaccgtgc gcttcaccgc ccccaacggc ctgaaggggg
     1801 ccctgctctc ccgcaagacc aagggcgcca tggccaccct gcagctcacc ctgcgcttcg
     1861 gccgcgaggc ggagctgatg gaccgcaagg ccgtgcccgc catgaccggc gccatgctca
     1921 tgcgcggcac caccaagcac acccgccagg agctgaccga caccttcgac aagctgcgcg
     1981 cccaggtcat ggtgaacggc ggcccggcgt ccgccacggc caccctcacc gtcccccgcg
     2041 agaatctggc cgccgccctg cgcctggtgg ccgaggtgct gcgcgaaccc gccttcccgg
     2101 cctccgagct ggagacgctg gtgaagcagc aggtcacggg catcgagtcc cagcgcaacg
     2161 agccccaggc caaggtcatc gagttcatgg gccaggcctt cgatccctac ccggccggcc
     2221 acccttcggc ctaccgcggc cccgacgccc gcctggaaga gttcaagacc ctcaaggccg
     2281 aggacctgaa ggccttccac caggccttct acggcgccaa ccacgcgggc ttcgccgcct
     2341 ccggcgattt cgacgccgcc gagctgcaga agctggtgac cgagctcttc ggcagctgga
     2401 cctccccggc cgcctatgag cgcctcgcgg cccgcctcaa ggtgcccgcc gcccagcgca
     2461 aggacatcga gacccccgac aagaagggcg ccttcttcct cgtgcagagc cgctgggcca
     2521 tgaaggacac cgatgcggac taccccgcct tcctcatggc gaaccagatc ctgggcggcg
     2581 gcgcgctgaa gagccgcctc gccgatcgcc tgcgccagaa ggagggcttc agctacggcg
     2641 ccggcgcctt cgccaacgtg ggcaacctcg atcccgtcac cagctggcag gcctacgcca
     2701 tctacgcgcc ggagaacgcc gccaagctgg aggccgcctt cgacgatgag atccagaagg
     2761 ccctgaaggg cggcttcacc caggaggagc tggactttgc ccgcaccacc tggctccagg
     2821 gcgaaaagac cgagcgccag gaggaccgcg ccatcgcgac ctggctgggc cgcagcctct
     2881 acctgggccg gtcggtccgc ttcgaggccg agctggaagc caaggtacag gccctgaagc
     2941 ttgacgaggt caacgccgcc ctgcgcaagt acctccaccc cgaaaccttc gtggtggtca
     3001 aggccggcga tttcgccaag gcccccaaga agtagccgcg gctgaagcat gaacgaccga
     3061 aggggcggcc atggccgccc cttcggcttg ggggaacgac accctcagat ttcgaagtac
     3121 cgacgcagaa ccgtttccag gagttgccga gcttcctctt ccgaggcatg gaggctggtg
     3181 tcgtacagat ccttggcgat ggatgcaaat gcctcaagca gggttggatc gaagtgattt
     3241 ccagcccctg cctggaggat ctccatggcg gaatcgaagg acagtggttc cttgtagggc
     3301 cgtttggaac acagggcgtc gaagacatcc gcgatggcga aaacacgtgc ggccagcggg
     3361 atggcctcac ccgccaggcc tcgcgggtaa cccgagccgt cccatttctc gtggtggcct
     3421 gccacaacct cccgggcgcc atccagccat cgagcccccg atacgatctc ctcgcccatg
     3481 tggacgtggc cccgcatcaa acccatttcc tccgccgtca gctttccggg cttgagcagg
     3541 atggcatccg ggatcccgat cttgcctgcg tcgtgcagga agctgccggc gatcaatgcc
     3601 tgcatctggg caccgtggat tccagcggct tccgcaagcc tggacgacat ccaggccacc
     3661 cggtagttgt gggcgc
//
LOCUS       DATGWW010000185         3609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_287215, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000185 DATGWW010000000
VERSION     DATGWW010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3609
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287215"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1176
                     /locus_tag="VK150_02710"
     CDS             <1..1176
                     /locus_tag="VK150_02710"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HLP30244.1"
                     /translation="ALSGSAGPRYLGFVTGGSTPAATVGDLLVAMTDQNLSDRSQATA
                     TAIEHHALALLRDLFGLPAAFEGAFVTGGTQANLVGLAVGRQWAAQRLGFDAAEDGLA
                     GQPPIRLLAAAPHASLLKAAAVLGLGRRAWLPVACEPGTERMDLASLASALAGLKGAQ
                     AVVAASAGTVTTTAFDDLARTADLCERHGAFLHVDGAFGLFAATVPALAGRLEGLQRA
                     DSVATDAHKWLNVPYDAGLLFTRHLALQEQVFKASAAYLSAGGDLFHRTPENSRRWRA
                     LPVWATLQAYGRSGVAEVVSRCCDLASALGDWIEASDAYDLLAPVDLNIVCFAPKHAD
                     PAVVLDRLAADGRCFLTPGAWQGRKGLRAAFSNFMTTGEDLTLVQAALADAAQMERP"
     gene            1173..1499
                     /locus_tag="VK150_02715"
     CDS             1173..1499
                     /locus_tag="VK150_02715"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HLP30245.1"
                     /translation="MIADTPKPPYVAVIFSSLRTEGDRGYGAMADRMEELAKAQPGFL
                     GVESARDAEGFGITVSYWRDEASVAAWKAHAEHAVAQRLGREAWYGAFRVRVCRVERD
                     SGMGTA"
     gene            1499..2365
                     /locus_tag="VK150_02720"
     CDS             1499..2365
                     /locus_tag="VK150_02720"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HLP30246.1"
                     /translation="MLGWLAYLTVAVVWGSTYFAIALGLESFTPYGMVAARFSVASVL
                     ALVLGRLRKEAWPPRREVGHLMIVGALLLGGSNALVSWAELHVSTGLVAVLAALVPLW
                     LAVFSIVKEPLGPKGWAGLALGIAGVAVLVWPSGGVRIHAGGLMAMVAAPLIWSWGTL
                     HGKHFVHGGGLLTNVGIQMLTAAVIGLAVAPLTGGFLRGPVTPKALLAIGYLALFGSV
                     LAFSAYIYLAKAWPPAKMGTYAYLNPLVAVLLGSLILHEAFGFREVLGMVVILAAVAL
                     VQLRPKDADSTH"
     gene            2430..>3609
                     /locus_tag="VK150_02725"
     CDS             2430..>3609
                     /locus_tag="VK150_02725"
                     /inference="COORDINATES: protein motif:HMM:TIGR02231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mucoidy inhibitor MuiA family protein"
                     /protein_id="HLP30247.1"
                     /translation="MERFPFLLLPTLSVLLCAQEPVILQAPIIRVRLHPDEAWVTRSG
                     RTRVDGAGIHRLDIGNLPSGLRLEDLQVSAKGPAGTRMGDVAVRADVRTVTETAEWRK
                     LEGERERLRDRRDDLESQRDSLAAEQKFLRELQATHAKELSTRLAYTLPPSQGLTEFG
                     KSLQQRLAVLMKEERRATRDLNDLTKEERRLDAELLKRQGEQRTAPSIVRVELTTAGA
                     GVVEVELLYRQTQARWRPNYEARLSEDRKTLGLGLYAAITQKTGEPWNGVRLEISNAR
                     PSRGLDFGMFDGPQIVSLDYSSPGSTPIKFAHSERALAAQSNTYSAAAPPPPPPRQAT
                     AVVEVVASSSEAEMVEEATGLASTWVLEGSKDIPSDGEPHRFRVTGQDLRPTMTLLAV
                     P"
BASE COUNT          544 a         1216 c         1233 g          616 t
ORIGIN      
        1 gccctgtccg gttccgcggg gccgcggtat ctcggcttcg tcacgggcgg gtccaccccg
       61 gccgccaccg tcggggacct gctggtggcc atgaccgacc agaacctcag cgaccgttcc
      121 caggcgacgg ccacggccat cgagcaccac gccctggccc tgctgcggga cctcttcgga
      181 ctgccggcgg ccttcgaagg cgccttcgtc accggcggca cccaggcgaa cctggtgggc
      241 ctcgccgtgg gccgccagtg ggctgcgcag cgcctgggct tcgacgccgc ggaggacggc
      301 ctggcggggc agcccccgat ccgcctcctc gccgccgcgc cccacgcgag cctgctgaag
      361 gccgcggccg tgctcggcct gggtcgccga gcctggcttc ccgtcgcctg cgaaccgggc
      421 acggagcgga tggacctcgc cagcctcgcg tcagccctgg cgggcctgaa gggcgcgcag
      481 gcggtggtgg ccgcgagcgc cggcacggtg accaccaccg cgttcgatga cctggcccgc
      541 acggcggacc tctgcgagcg ccacggtgcg ttcctgcacg tggacggtgc cttcggtctc
      601 ttcgccgcga cggttccagc cctggcgggg cgcctggagg ggctgcagcg ggccgacagc
      661 gtggccaccg acgcgcacaa gtggctgaac gtgccctatg atgccgggct gctgttcacg
      721 cggcatctcg ccctgcagga gcaggtgttc aaggccagcg cggcctacct gtccgccggc
      781 ggcgacctgt tccaccgcac gcccgagaac agccggcggt ggcgcgcgct gcccgtctgg
      841 gcgacgctcc aggcctacgg ccgctcgggc gtggcggagg tggtctcccg ctgctgcgat
      901 ctggcctccg ccctcggcga ctggatcgag gcgtccgatg cctacgacct gctcgcgccg
      961 gtggacctga acatcgtctg cttcgcgccg aagcatgcgg accccgccgt ggttcttgat
     1021 cgactggcgg cggacggccg ctgcttcctc acgcccgggg cctggcaggg ccgcaagggc
     1081 ctgcgggcgg ccttctccaa cttcatgacc accggtgagg acctgactct tgtccaggcc
     1141 gccctcgccg atgccgcgca gatggagcgc ccatgattgc cgacaccccc aagccgccgt
     1201 acgtggcggt catcttcagc agcctgcgca ccgagggcga ccggggctac ggcgccatgg
     1261 ccgaccgcat ggaggagctg gcgaaggcac agccgggctt cctgggcgtg gagagcgcgc
     1321 gggacgcgga aggcttcggc atcaccgtgt cctactggcg ggacgaggcc tcggtcgcgg
     1381 cctggaaggc gcatgcggag catgccgtgg cccagcgcct cgggcgcgag gcctggtacg
     1441 gggccttccg cgtccgggtc tgccgcgtcg agcgcgactc cggcatgggg acggcctgat
     1501 gctcggctgg ctcgcctacc tcaccgtggc cgtggtgtgg ggctccacct acttcgccat
     1561 cgccctgggc ctggagtcct tcacgcccta cggcatggtg gccgcgcggt tctcggtggc
     1621 ctcggtgctg gccctggtcc tgggccggtt gcggaaggaa gcctggccac cacggcggga
     1681 ggtgggccac ctgatgatcg tgggcgcgct gctgctgggc ggctccaatg ccctggtctc
     1741 ctgggcggaa ctgcacgtct ccaccggcct cgtggcggtg cttgcggccc tcgtgcccct
     1801 gtggctcgcc gtgttctcca tcgtgaagga gccactgggc cccaagggct gggcgggcct
     1861 ggcgctcggc atcgccggcg tggccgtgct ggtgtggccc agcggcgggg tgcgcatcca
     1921 cgcgggcggc ctgatggcca tggtggcggc gccgctcatc tggtcctggg gcaccctcca
     1981 cggcaagcac ttcgtccatg gcggcggcct gctcaccaac gtgggcatcc agatgctcac
     2041 ggccgccgtg atcggcctgg ccgtggcgcc gctcacgggc ggcttcctcc gggggcccgt
     2101 cacccccaag gccctcctcg ccatcgggta cctggcgctc ttcggctcgg tgctggcctt
     2161 ctccgcctac atctacctgg ccaaggcctg gcccccggcc aagatgggca cctacgccta
     2221 cctcaacccg ctggtggcgg tgctgctggg cagcctcatc ctgcatgagg ccttcggctt
     2281 ccgcgaggtt ctcggcatgg tggtcatcct ggcggccgtg gccctggtgc agctgcgacc
     2341 gaaagatgcg gattcaacgc actgagattt attcgccgac gatgactcag ctgccatggt
     2401 ttattctctg agccactggg gattcaatca tggaacggtt tccttttttg cttctgccga
     2461 ccctgtctgt gctgctctgc gcccaagagc cggtgatttt acaggctcca atcatcaggg
     2521 tgcgattgca ccctgatgaa gcttgggtta cccgatcagg acgcactcgg gtggacgggg
     2581 ctggcatcca tcgcctggat atcggcaatc ttccctccgg acttcgccta gaggatttgc
     2641 aggtgagtgc caagggaccg gcaggaacgc gcatgggcga tgtggccgtg cgagcggatg
     2701 tgaggaccgt caccgaaacg gcggaatgga ggaagttgga gggcgagcgg gagaggctcc
     2761 gagatcgacg agacgatcta gagtcccagc gcgactcact tgctgctgag cagaagtttc
     2821 ttcgggagct tcaggccacc cacgccaagg aattaagcac gcgccttgcc tacacattgc
     2881 ccccttctca gggcctcacg gagtttggaa aaagcctgca gcaacggctc gcggtgctca
     2941 tgaaggagga gcgtcgtgca acccgtgacc tcaacgacct gacgaaggag gagcggcggc
     3001 tcgatgcgga actactcaag cgccagggag agcaacgaac agcacctagc attgttcggg
     3061 tggagctcac caccgcagga gcgggggtgg ttgaagtcga gctgctctac cgtcaaaccc
     3121 aagcacgctg gcgaccaaat tatgaagctc gactcagcga ggatcgtaaa acactcgggc
     3181 tgggactcta cgcggccatt acgcagaaaa ccggcgagcc ctggaatggt gtgaggttgg
     3241 agatcagcaa cgctagaccc agccgtggac tggattttgg aatgttcgat ggaccacaga
     3301 ttgtgagtct ggattactcg agtccaggga gtacgcctat aaaatttgca cactcggaga
     3361 gggctctggc tgcgcaatcc aatacgtact cggccgcagc accaccaccc ccgccgccac
     3421 gccaggccac cgccgtggtt gaggttgttg cttccagctc agaggcggaa atggtcgaag
     3481 aggccacggg attggctagt acttgggtgc tggagggatc caaggacatt ccaagcgatg
     3541 gcgagccaca tcgctttcga gtcacgggtc aggacctgcg accaaccatg accctccttg
     3601 ccgtgcctc
//
LOCUS       DATGWW010000186         3219 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_242225, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000186 DATGWW010000000
VERSION     DATGWW010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3219
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242225"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..829)
                     /locus_tag="VK150_02730"
     CDS             complement(113..829)
                     /locus_tag="VK150_02730"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLP30248.1"
                     /translation="MAILEIKNVSKFFGGLAANSDVSFSVEEGMIMGLIGPNGAGKTT
                     LFNCITGYYPPSKGEIIFDGRRMNGLDPDKVCMLGMVRTWQKVRPLAKLSVVDNVMVG
                     ALARTSSLKIAREMAMEQIKVVRMEHRMDFPAGGLPIGERKKLEVARALATQPKLLLL
                     DEVMGGLNPAESEEIIQLILDIKQRGLTQMVIEHDMKAIMRISDRIVVLTSGEKLTEG
                     SPQEVVANPDVISAYLGTSH"
     gene            complement(829..1878)
                     /locus_tag="VK150_02735"
     CDS             complement(829..1878)
                     /locus_tag="VK150_02735"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLP30249.1"
                     /translation="MTKTIFKAAFGFLVLASLLILPKYVESPYALHMMILLFLSVSQG
                     QSWNILGGYAGQHSVGHAAYFGVGAYATMMLMHTKQIAPWYGVWAGIVIVVVVALAIG
                     SICFRLRGPYFVLASIAVAEILRLSAINLTTLTNGAEGILATELPVFKIGETVITDFL
                     TKVPFYYIGLFLALLTIGVTYWVQHSKLGYYFQAIREDQDAAHSLGIHISVYKNIGLV
                     ISAVLTSLAGSFYGIYVGFVDPPTVLGLDVSVQIMLICIIGGMGTLWGPVLGSLILVP
                     LSEALRSNMITEGLVKVGLVGADTKVGLFLKENLSHAHVLLYGILVVLVILFMPDGLM
                     GFVKKLATRRKQEAV"
     gene            complement(1889..2758)
                     /locus_tag="VK150_02740"
     CDS             complement(1889..2758)
                     /locus_tag="VK150_02740"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLP30250.1"
                     /translation="MAVFLQSLISGILIGGVYALIGIGLTLIFGVMRVINFAHGDILM
                     VGMYLTYIIFTMMGVDPFVSVLITFPLMFLFGGFLQKVFINRILNAVAQNQILLTIGL
                     GLIMSNTVMLIFTSDYKILTTSYSSATLQVGGGVSVSTPLLISFLITAAITAALYWFL
                     LKTDTGQAIRATAQDRDAAQLMGINVKRMSIIAFGLGAALAGTAGALISPTYYIFPQV
                     GGVFTLKAFVITVLGGMGSVVGATLGGVLIGITESMSAVYISSGWKDVVVFVLFLLVL
                     LFKPSGLMGKSRT"
     gene            complement(2864..>3219)
                     /locus_tag="VK150_02745"
     CDS             complement(2864..>3219)
                     /locus_tag="VK150_02745"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLP30251.1"
                     /translation="QWTDDVSWPGAKDFGVRYKAKFGKEPTYHAACAYASMMIMAETA
                     RNAGGDRAKTRDGLKAGKWNGVMGEVKFADYDGFTNQNNHQMLVQQILGGNYETVLPA
                     PFATKKAVYPFPKWK"
BASE COUNT          629 a          967 c         1067 g          556 t
ORIGIN      
        1 ccgaggcctt gaagatgagc acgaagccga gcgcgatgag cgagtacagc atgcctgcca
       61 tcaggccgcc gaacaaggtt tcaagaaaga atcccatggt ccgtcgcgtc cttcagtggc
      121 tggtgcccag gtaggcgctg atcacatcgg ggttggcgac gacttcctgt ggagagccct
      181 cggtgagttt ctcccccgac gtcaggacga cgatgcggtc tgagatgcgc atgatggcct
      241 tcatgtcgtg ctcgatgacc atctgcgtga gtccgcgttg cttgatgtcg aggatgagct
      301 ggatgatctc ctcgctctcg gcggggttca gcccgcccat gacctcgtca agcagcagca
      361 gcttcggctg ggtggccagg gcccgggcca cctcgagctt cttgcgctcg ccgatgggca
      421 gcccaccggc cgggaagtcc atccggtgtt ccatgcgcac gaccttgatc tgctccatgg
      481 ccatctccct ggcgattttc agggagctgg tgcgcgccag ggcgcccacc atcacgttgt
      541 ccaccacgga gagcttcgcc aggggccgga ccttctgcca ggtgcgcacc atgcccaaca
      601 tgcaaacctt gtcgggatcc aagccgttca tgcggcggcc atcgaagatg atctcgccct
      661 tggagggcgg gtagtaccca gtgatgcagt tgaagagggt ggtcttgccc gcgccgttgg
      721 gcccgatgag gcccatgatc atgccttcct ccaccgagaa ggagacatcc gagttggccg
      781 cgaggccgcc gaagaacttg ctgacgttct tgatctccag gatggccatc agaccgcctc
      841 ctgcttccgg cgcgtggcca gcttcttgac gaaccccatg aggccgtcgg gcatgaacag
      901 gatgacgagc accacgagga tgccgtagag cagcacgtgg gcgtgggaga ggttctcctt
      961 gaggaagagc cccaccttgg tgtccgcccc caccaggccc accttcacca ggccctcggt
     1021 gatcatgttg cttcggaggg cctcggagag cggcaccagg atcaaggagc ccagcacggg
     1081 cccccagagg gtgcccatcc caccgatgat gcagatgagc atgatctgga cggacacgtc
     1141 gaggccgagg accgtgggcg gatccacaaa tcccacgtag atgccgtaga agctgcccgc
     1201 cagcgaggtg aggaccgctg agatgaccag gccgatgttc ttgtagaccg agatgtggat
     1261 gcccagggag tgcgccgcat cctggtcctc gcggatggcc tggaagtagt acccgagctt
     1321 ggaatgctgc acccagtagg tgacgccgat ggtgagcagc gccaggaaga ggccgatgta
     1381 gtagaaggga accttggtca ggaagtcggt aatgacggtt tcgccaatct tgaacacggg
     1441 cagttccgtg gcgaggatgc cttccgcccc gttggtcagg gtcgtgaggt tgatggccga
     1501 gagccggagg atttccgcca cggcgatgga ggccagcacg aagtaggggc cccggaggcg
     1561 gaagcagatg ctgccgatgg ccagcgccac gaccacgacg atgacaatgc cggcccacac
     1621 gccataccag ggggcgatct gtttggtgtg catgagcatc atggtggcgt aggcgcccac
     1681 gccgaagtag gcggcgtggc ccacggaatg ctgtcccgcg tagccgccca ggatgttcca
     1741 gctctggccc tgggagacgc tcaggaagag caggatcatc atgtgcagcg cgtacgggct
     1801 ctccacatac ttcggcagga tcagcagtga ggcgagcacg aggaaaccga aggcggcctt
     1861 gaagatggtc ttggtcatgg gggtctcctc aggtccgcga cttgcccatc aagcccgagg
     1921 gcttgaagag gagcaccaac aggaagagca caaagaccac cacgtccttc cagccggacg
     1981 agatgtagac cgcgctcatg gattcggtaa tgccgatcag cacacctccc agcgtggcac
     2041 ccaccacgct gcccataccg cctagcaccg tgatgacgaa ggccttcaac gtgaagaccc
     2101 cgcccacctg ggggaagatg tagtaggtcg gcgagatcag cgccccggcc gtgcccgcca
     2161 gcgccgcgcc gaggccgaag gcgatgatgg acatccgttt gacgttgatg cccatgagct
     2221 gcgccgcgtc gcggtcctgg gccgtggccc ggatcgcctg ccccgtgtcg gtcttcagca
     2281 ggaaccagta gagggcggcc gtgatagccg cagtgatcag gaaggagatc agcagcggtg
     2341 tggacaccga cacgccgccg cccacctgga gggtggccga ggagtacgaa gtcgtgagga
     2401 tcttgtagtc cgacgtgaag atcagcatca cggtattgct catgatgagc cccaggccga
     2461 tggtgagcag aatctggttc tgcgccacgg cgttgaggat ccggttgatg aagaccttct
     2521 ggaggaagcc cccgaacagg aacatcaggg ggaacgtgat caggacggac acgaacggat
     2581 ccacgcccat catcgtgaaa atgatgtagg tgagatacat ccccaccatg aggatgtcgc
     2641 cgtgggcgaa attgatcacg cgcatcacgc cgaagatgag cgtgagcccg atgccgatga
     2701 gcgcgtacac cccgccgatc aggatgccgc tgatgaggga ttgcagaaag acagccatag
     2761 gcgactggac ctcggtgaaa ggaagcccca gcgcggctca gccgagctgg ggcgaggggg
     2821 ctcgggagtg tgcgcggcgc acggcccccc gggcagggtc agctcacttc cacttgggga
     2881 aggggtagac cgccttcttc gtggcgaacg gggcgggaag caccgtttcg tagttcccgc
     2941 cgaggatctg ctgtacgagc atctggtggt tgttctggtt ggtgaagccg tcgtaatcgg
     3001 cgaacttgac ctcgcccatc acgccgttcc acttgcccgc cttcaggcca tcacgggtct
     3061 tggcgcggtc gccgccggcg ttccgggcgg tctcggccat gatcatcatc gaagcatagg
     3121 cgcacgcggc gtggtaggtg ggttccttgc cgaacttcgc cttgtagcgg acgccgaaat
     3181 ccttcgcgcc cggccagctc acgtcgtcgg tccactggg
//
LOCUS       DATGWW010000187         2390 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_327056, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000187 DATGWW010000000
VERSION     DATGWW010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2390
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327056"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            392..1159
                     /locus_tag="VK150_02750"
     CDS             392..1159
                     /locus_tag="VK150_02750"
                     /EC_number="3.1.4.17"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004114 - 3',5'-cyclic-nucleotide
                     phosphodiesterase activity [Evidence IEA];
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-nucleotide phosphodiesterase"
                     /protein_id="HLP30252.1"
                     /translation="MELRVLGCSGGIGGGHRTTSFLVDGDVLIDAGSGVTGLSLDQMA
                     CVRHIFLTHSHLDHVHCIPLMVDSIFDTITEPIQVHGQPETLKALEEHLFNGVIWPDF
                     TRLPHPERPVLKFVPMRPEQSVHVGRREFRMVPVNHIVPGVGYVVSSEGDGTFAFSGD
                     TTTNDTFWEGLNRLPKLDLLVVEAAFSNEEVELCRLARHYCPELLAKDLKKLKHRPKV
                     YLTHAKPGEEVKIFDECRALIRDREVHQLSGGEVFTL"
     gene            1226..>2390
                     /gene="ffh"
                     /locus_tag="VK150_02755"
     CDS             1226..>2390
                     /gene="ffh"
                     /locus_tag="VK150_02755"
                     /inference="COORDINATES: protein motif:HMM:TIGR00959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HLP30253.1"
                     /translation="MFDGLTERLSRTLANLRGTGRLTEENVKETLREVRMALLEADVA
                     LPVVRDLIEHIRERAVGQEVLKSLTPGQTLVKIVHDELVKVMGAETAELDLAVRPPAV
                     VLMAGLQGSGKTTTVAKLSRWLKETRKKSVLVASGDVYRPAAIDQLKTLAAEVGVEFF
                     PSDPKQDPVVIAKAAVDYAQKHSKDVLIFDTAGRLHIDEAMMGEIQRLHAALNPVETL
                     FVVDSMTGQDAANTAKAFNDALPLTGVVLTKTDGDARGGAALSVRQITGKPIKFLGVG
                     EKTTALEPFHPDRVASRILGMGDVLSLVEEVQRKVDHEEAARLAKKITKGKGFDLEDF
                     RDQLRQLQSMGGVANIMDKLPGMSQVPEHMKAQVNDKEFKRLEAIINSMTPGER"
BASE COUNT          437 a          790 c          779 g          384 t
ORIGIN      
        1 ggtggcggga ctcgcgttca ggccctgggc caagcgccag gagagcaggg ctccggcggc
       61 gagatagagg atcgcggcaa taatgggggc ggtgacggtc atggagaggg gttatccgat
      121 ccgaggccgc atgatggcac agttcgcaga attgtttaac tcgccgccgg cgcacacgga
      181 ttggggagcc cttcgctgtt ttggtggcgc cggggtggtg aaattggcgc cgctcgacgg
      241 gaccggcggg gcggggtgcc ggggcgcaaa ctgtgacaac ggttgcaaaa gcgtgctaca
      301 aaaggcgggc ccaggggcga aatggggagc tcgccctgta ttctctggta caaaccgggg
      361 cgcaaaaggc gccaggggag caaggggtgg tatggagctg agggttctgg gttgcagtgg
      421 aggcatcggt ggcggccacc gcaccacctc gttcctggtc gacggcgacg tcctgatcga
      481 cgcgggcagc ggcgtgacgg ggctctccct ggaccagatg gcctgcgtcc ggcacatctt
      541 tcttacccac tcccacctcg accatgtcca ctgcatcccg ctcatggtgg acagcatctt
      601 cgacaccatt accgagccca tccaggtcca cggccagccg gagaccctca aggcccttga
      661 agagcacctc ttcaacggcg tcatctggcc cgatttcacc cgcctgcccc atccggagcg
      721 cccggtactg aagttcgtgc ccatgcggcc ggagcagtcc gttcatgtgg gccggcgtga
      781 gttccggatg gtgcccgtga accacattgt gccgggggtg ggttacgtgg tcagcagcga
      841 gggggacggt accttcgcct tcagcggcga caccaccacc aacgacacct tctgggaggg
      901 gctcaaccgc ctgcccaaac tcgacctgct ggtggtcgaa gccgccttct ccaacgagga
      961 ggtggagctc tgccgcctgg cccgccacta ctgccccgaa ctgctggcca aggacctcaa
     1021 aaagctgaaa caccgcccca aggtctacct cacccacgcc aagcccggcg aagaggtgaa
     1081 gatctttgac gaatgccgcg ccctgattcg cgaccgcgaa gtgcaccaac tgtcgggcgg
     1141 cgaggtcttc actctataat ccccgtttca tgaccgcggc cggggcccct tgccccggcc
     1201 gcgtatccct atttcgaggc tccccatgtt cgacggcctg accgaacgac tttcccgtac
     1261 cctggccaac ctgcgcggca cgggccgcct gacggaagag aacgtcaagg agaccctgcg
     1321 cgaggtgcgc atggccctgc tggaggccga cgtggccctg ccggtggtgc gcgacctcat
     1381 cgagcacatc cgcgagcggg cggtgggcca ggaggtgttg aagagcctga cccccggcca
     1441 gacactggtg aagatcgtcc atgacgagct ggtgaaggtc atgggcgccg agaccgccga
     1501 gctggatctg gccgtgcgtc ctcccgcggt ggtgctcatg gccggcctgc agggttccgg
     1561 caagaccacc accgtggcga agctctcccg ctggctcaag gagacccgca agaagtcggt
     1621 tctggtcgct tccggcgacg tttaccgccc ggcggccatc gatcagttga agaccctggc
     1681 cgcggaggtc ggggtcgagt tcttcccctc ggacccgaag caggacccgg tggttatcgc
     1741 caaggccgcc gtggactacg cccagaagca ctcgaaggat gtgctgatct tcgacaccgc
     1801 cggccgcctc cacatcgacg aggcgatgat gggggagatc cagcgccttc acgccgccct
     1861 gaacccggtc gagaccctct tcgtggtcga ctccatgacc ggccaggacg cggccaatac
     1921 ggccaaggcc ttcaacgacg ccctgcccct gaccggtgtc gtcctgacca agaccgacgg
     1981 cgatgctcgc ggcggcgcgg ccctctcggt ccgccagatc accggcaagc ccatcaagtt
     2041 cctgggcgtg ggcgagaaga ctaccgccct ggaaccgttc catcccgacc gcgtcgcctc
     2101 ccgcatcctg ggcatgggcg acgtcctctc cctggtggaa gaggtccagc gcaaggtcga
     2161 ccacgaggag gcggcccgcc tcgccaagaa gatcaccaag gggaaggggt tcgacctgga
     2221 ggacttccgc gaccagctcc gccagctcca gagcatgggc ggcgtcgcca atatcatgga
     2281 caagctgccg ggcatgtccc aggtccccga gcacatgaag gcgcaggtaa atgacaagga
     2341 attcaaacgc ttggaggcca tcatcaactc catgacccct ggtgagcgcc
//
LOCUS       DATGWW010000188         2118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_189081, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000188 DATGWW010000000
VERSION     DATGWW010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189081"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..497
                     /locus_tag="VK150_02760"
     CDS             <1..497
                     /locus_tag="VK150_02760"
                     /inference="COORDINATES: protein motif:HMM:NF018652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30254.1"
                     /translation="SEDEVADVFEALQEELPRLGLQPYEISNYARPGAESRHNNRYWE
                     RRPFLGLGPSAASQIGDFRWTEGSVLPAWAEGRAALDLQELDPAEALAEIPLLGLRLH
                     RGLDWGALRARAESLNLRPLCDAWEARLRALAGEGLAIWEADRVHLSSRGMLVSNGIL
                     GMFT"
     gene            494..1381
                     /locus_tag="VK150_02765"
     CDS             494..1381
                     /locus_tag="VK150_02765"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HLP30255.1"
                     /translation="MRYLGESAALLTSVCWTLNSVCFTVAGRRVGSTTVNVGRMLMGW
                     ASLLLLHLALYGSLFPVQVGGARLGWLAVSGLIGFALGDAVLFEAFVLIGARLAMLLM
                     TLSPIFSALLAWLFLGQDLGLPKLLAMVVTLGGIAWVVWGGGDHENHPHLWRGILLGV
                     GGAMGQSIGLLFSKFGLAGDFPPISANLIRVTAGGAALLLYFGVTGSLRGTVARLRDG
                     RATAFIGLGALTGPVLGVVLSLIAIAKAPMGVAATLMSLSPVLLLPISHLLFKEKVGG
                     HAILGTLLALAGAAALFFV"
     gene            1515..>2118
                     /gene="pip"
                     /locus_tag="VK150_02770"
     CDS             1515..>2118
                     /gene="pip"
                     /locus_tag="VK150_02770"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HLP30256.1"
                     /translation="MSLRKDPVSWLYPPIEPRRVMHLKVSDLHELHVEESGNPDGKPV
                     VFLHGGPGGGTSPKHRRYFDPAKYRIILFDQRGCGQSTPYAEVRENSTWDLVADIERI
                     REHLGIERWMVFGGSWGATLGLAYAERHPERVTELILRGIFMLRRREVDWLYQEGASR
                     IFPDAWEPYRDAIPEGERGDFLQAYATRLLSEDPAVNLPAA"
BASE COUNT          286 a          776 c          699 g          357 t
ORIGIN      
        1 cctccgagga cgaggtggcc gacgtcttcg aggccctgca ggaagagctg ccccggctcg
       61 gcctccagcc atacgagatc agcaactacg cccgacctgg cgccgagtcc cgccacaaca
      121 accgctactg ggagcgccgc cccttcctgg gcctgggccc cagcgccgcc tcgcagatcg
      181 gcgacttccg gtggacggag ggcagcgtcc tccccgcctg ggctgaaggt cgcgctgcgc
      241 tcgatctgca ggagctcgac cccgccgagg cgctggcgga gattcccctc ctgggtctcc
      301 gcctccaccg cggcctggac tggggtgccc tccgcgcccg cgccgagtcc ctgaacctgc
      361 gtcccctctg cgacgcctgg gaggcccgcc tccgcgccct ggccggggag ggtctcgcga
      421 tctgggaggc ggaccgcgtg cacctcagct cccgcgggat gctcgtcagc aacggcattc
      481 tggggatgtt cacatgagat acctcggcga aagcgccgcc ctgctcacct cggtctgctg
      541 gacgctgaac tccgtctgct tcacggtggc gggccgccgg gtgggctcga ccacggtgaa
      601 cgtgggccgc atgctcatgg gctgggcctc gctcctcctg ctgcacctgg ccctctacgg
      661 cagcctcttc cccgtgcagg tcggcggcgc ccggctgggc tggctggcgg tctcagggct
      721 catcggcttc gccctgggcg acgcggtgct gttcgaggcc ttcgtgctca tcggggcgcg
      781 gctggccatg ctgctcatga cgctctcgcc catcttcagc gccctgctgg cctggctgtt
      841 cctcggtcag gatctcggcc tgcccaagct cctcgccatg gtggtcaccc tcggcggcat
      901 cgcttgggtg gtgtggggcg gcggcgacca cgagaaccat ccgcacctct ggcgcggcat
      961 cctcctgggt gtcggcgggg ccatgggcca gtccatcggc ctgctcttca gcaagttcgg
     1021 cctggcgggc gatttcccgc cgatctcggc gaacctcatc cgggtcaccg ccggcggcgc
     1081 ggccctcctg ctctacttcg gcgtcacggg cagcctgcgc ggcaccgtgg cgaggctgcg
     1141 cgacggccgg gccacggcct tcatcggcct cggcgccctc acaggcccgg tgctgggggt
     1201 ggtgctctcc ctgatcgcca tcgccaaggc ccccatgggc gtggccgcca ccctgatgag
     1261 cctctccccc gtgctcctgc tgcccatctc ccacctcctg ttcaaggaga aggtgggcgg
     1321 ccatgcgatc ctcggaaccc tgctggccct ggcgggcgcg gcggcgctgt tcttcgtgta
     1381 gccccagccg gggtcaaagg aaaaaatcac caccaataca ccaggaaaga agaggcagtt
     1441 cttggtgcct tggtgtcttg gtggtgaaaa tgaacgttct caatcccagg tgctcaccat
     1501 cgaaggagcc acgcatgtcg cttcgcaagg atcccgtcag ctggctctat ccgcccatcg
     1561 agccgcgtcg cgtgatgcac ctgaaggtct cggatctgca cgagctgcac gtggaggaga
     1621 gcggcaatcc cgacggcaag cccgtggtct tcctccacgg cggccccggg ggcggcacca
     1681 gccccaagca ccgccgctac ttcgaccccg cgaagtaccg catcatcctc ttcgatcagc
     1741 ggggctgcgg ccagagcacg ccgtacgccg aagtccgcga gaattccacc tgggatctcg
     1801 tggccgacat cgagcgcatc cgtgagcacc tgggcatcga acgctggatg gtcttcgggg
     1861 gctcctgggg ggcgacgctg ggcctggcct acgcagagcg gcatcccgag cgggtgaccg
     1921 agctgatcct ccgcggcatc ttcatgctgc gccgccgcga ggtggactgg ctctaccagg
     1981 agggcgccag ccgcatcttc ccggatgcct gggagcccta ccgcgacgcc atccccgagg
     2041 gcgagcgtgg cgacttcctg caggcctacg cgacgcggct gctgagcgag gatccggccg
     2101 tgaacctgcc cgccgcca
//
LOCUS       DATGWW010000189         1872 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_61737, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000189 DATGWW010000000
VERSION     DATGWW010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1872
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61737"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(205..1125)
                     /locus_tag="VK150_02775"
     CDS             complement(205..1125)
                     /locus_tag="VK150_02775"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HLP30257.1"
                     /translation="MAGRILIVDDNAMIRSEIKAVLMKDGTFAHFMEASDGLTAFKTI
                     METPPDLVLCDLVMPGFDGLKFLGLKASRKELEQIPVIILTAEDDLDRKAEILERGAS
                     DYVTKPFHEKELLARVRIHTKLKLLQDELRQMNTQLEALSVTDVLTGLANRRRLMTRL
                     EEEVQRARRYKTPLSVVMIDIDHFKQVNDTHGHAMGDEVLRNIGAMLRASVRTTDLAA
                     RYGGEELTVVLPHTDLAAAVQVADNLRQKFAEIEHNLDGVALRKTASLGVAARDGQGE
                     VPSAEDLLKHADEALYRAKQNGRNRVEAAE"
     gene            complement(1125..>1872)
                     /locus_tag="VK150_02780"
     CDS             complement(1125..>1872)
                     /locus_tag="VK150_02780"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HLP30258.1"
                     /translation="RRLWTAGGPEACAAWGRLWGEGLRMLGFNVDFAPVLDLWDGHPT
                     AGIGDRAASERPSEAAAAVGAFLHGLEGAGVRGCLKHFPGLGGTTLDSHQGLPTLDDP
                     AQVDRNASAFVPLGHPDRLVMVAHLRTPASGTLPASLHRGSVAENPWGVQGRFLPDDL
                     EMGGCADFSWDERVRLALEAGNQWLLVCQTPEGWAACAEAAAHLPEPLWAPALAATVI
                     MRRHLAPAPPFDPEAWKAWLTRLQTAAKEA"
BASE COUNT          254 a          638 c          686 g          294 t
ORIGIN      
        1 aaggccatga tcgaggccct ggacctgcgc aagcccatct accgcgccac cgcggcctac
       61 ggccacttcg ggcgccccga gttcagctgg gagaagaccg acaaggtcga cgcccttcgc
      121 aaggccgcca agtagccccg cgattcgcgc cccatggaaa cggccccgga cggggccgtt
      181 tccatggggg ttcagaaagg ccagctactc cgccgcctcc acccggttgc gtccgttctg
      241 cttggcgcgg tacagggcct cgtcggcgtg tttcagcagg tcctcggcgc tgggcacctc
      301 gccctggccg tcccgggccg cgacgccgag gctggcggtc ttgcgcaggg cgacgccgtc
      361 gaggttgtgc tcgatctccg cgaacttctg ccggaggttg tcggccacct ggacggccgc
      421 ggccaggtcg gtgtggggca gcaccacggt gagctcctcg ccgccgtacc gggcggccag
      481 gtctgtggtg cggacgctgg cccgcagcat ggcgccgatg ttgcgcagca cctcatcgcc
      541 catggcgtgg ccgtgggtat cgttcacctg cttgaagtgg tcgatgtcga tcatcaccac
      601 cgagaggggc gtcttgtagc gccgtgcgcg ctgcacctcc tcctcgagcc gcgtcatgag
      661 acggcgccgg ttggccaggc ccgtcagcac gtcggtgacg gagagggcct ccagctgcgt
      721 gttcatctgg cgcagctcgt cctggagcag cttcagcttg gtgtggatgc gcacccgggc
      781 cagcagctcc ttctcgtgga agggcttggt gacgtagtcg gaggcgcccc gttcgaggat
      841 ctccgccttg cggtcgaggt cgtcctcggc ggtgaggatg atgacgggga tctgctccag
      901 ctccttgcga ctggccttga gccccaggaa cttcagcccg tcgaagccgg gcatgacgag
      961 gtcgcacagc acgaggtcgg ggggcgtctc catgatggtc ttgaaggccg tgaggccgtc
     1021 ggaggcttcc atgaagtgcg cgaaggtgcc gtccttcatg agcacggcct tgatctcgct
     1081 gcggatcatc gcgttgtcgt cgacgatgag gatgcggccg gccatcaagc ctccttcgcg
     1141 gcggtctgga gccgcgtcag ccaggccttc caggcctcgg gatcgaaggg gggcgccggc
     1201 gcgaggtgcc ggcgcatgat caccgtggcc gccagggccg gcgcccagag gggttcgggc
     1261 aggtgggccg ccgcctcggc gcaggcggcc cagccctcgg gggtctggca caccagcagc
     1321 cactggtttc cggcctccag ggccaggcgc acccgctcgt cccagctgaa gtccgcacag
     1381 ccgcccattt ccaggtcatc cggcaggaat cggccctgga cgccccaggg gttttcggcg
     1441 accgagccgc ggtgcaggct ggcgggcagg gtgccgctgg ccggcgtgcg gaggtgcgcc
     1501 accatcacca ggcggtcggg gtgccccagg gggacgaagg ccgaggcatt gcgatccact
     1561 tgagctgggt catccaaggt gggcagcccc tggtggctgt ccagggtggt gccgccgagg
     1621 ccggggaagt gcttgaggca gccgcggacc ccggcgccct cgaggccgtg caggaaggcg
     1681 ccgacggcgg cggcggcttc cgagggccgc tcgctggcgg cgcggtcgcc gatgcccgcg
     1741 gtgggatggc catcccagag gtccagcacg ggggcgaaat ccacgttgaa ccccagcatc
     1801 ctcaggccct cgccccagag tcggccccag gccgcgcagg cctccggtcc gccggcggtc
     1861 cagaggcggc gc
//
LOCUS       DATGWW010000190         1593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_61749, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000190 DATGWW010000000
VERSION     DATGWW010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61749"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..550
                     /locus_tag="VK150_02785"
     CDS             <1..550
                     /locus_tag="VK150_02785"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HLP30259.1"
                     /translation="RRLSGWEALPEDVRSGHRPAVFIGNHTSLFDPPLMISTLPCHPV
                     FVAKRELAQVPFLGWVIWLAGFIFIDRRNQASARGSLHRAAERIREGQAIVAFPEGTR
                     SLDGRLLPFKMGAFALAFEAGVPVVPFAIQGGPGILPKGTWRVQGGPYHIRMGTLLES
                     SAFDSPNALRLAAEAAVAALLA"
     gene            complement(566..967)
                     /locus_tag="VK150_02790"
     CDS             complement(566..967)
                     /locus_tag="VK150_02790"
                     /inference="COORDINATES: protein motif:HMM:NF015953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HLP30260.1"
                     /translation="MTTLLRFLFSAIGLLVACSVVPGLGHGTFLDLLIVAVILGALNA
                     TLGTFLKLIAIVPMACSFGCFSLVINGLIFWLAGGLSSKLGLNFTVSGFWAGVFGALV
                     SSVVASILGAIFIPKDRQRPQGPPPPIKIIN"
     gene            complement(964..>1593)
                     /gene="epsC"
                     /locus_tag="VK150_02795"
     CDS             complement(964..>1593)
                     /gene="epsC"
                     /locus_tag="VK150_02795"
                     /inference="COORDINATES: protein motif:HMM:NF041874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase EpsC"
                     /protein_id="HLP30261.1"
                     /translation="GLMASDPACGNCEKRSLDLAQAFLARLPEVRRLLAADIQAGFEG
                     DPAATSPDEVLFCYPGLLAITNHRLAHELLKLGVPLLPRMITELAHSQTGIDIHPGAQ
                     IGERFFIDHGTGVVIGETCVIGRNVRIYQGVTLGAKSFPLDAEGHPVKGVPRHPVVED
                     DVIIYSNATVLGRITLGKGSAIGGNVWLTRSVPPGSVITQANEKDGMPS"
BASE COUNT          247 a          532 c          582 g          232 t
ORIGIN      
        1 ccgccgcctc tcaggctggg aggcgctgcc cgaagacgtg cgcagcggcc accgcccggc
       61 cgtcttcatc ggcaaccaca cctccctgtt cgatccgccc ctgatgatct ccacgcttcc
      121 ctgccacccc gtgttcgtgg ccaagcgcga gctggcccag gtccccttcc tcgggtgggt
      181 gatctggctg gcgggcttca tcttcatcga ccggcgcaac caggcctccg cccgcggaag
      241 cctccaccgg gccgccgagc gcatccgcga ggggcaggcc atcgtggcct ttcccgaagg
      301 cacccgcagc ctggacggcc gcctgctgcc cttcaagatg ggcgcgttcg ccctggcctt
      361 cgaggccggc gttccggtgg ttcccttcgc catccagggc ggccccggca tcctgcccaa
      421 gggcacgtgg cgcgtccagg gagggccgta ccacatccgc atgggcaccc tgctcgaatc
      481 gagcgccttt gacagcccga acgcgctcag gctggccgcg gaggccgcgg tggccgcgct
      541 gctggcctga ggccgattcc caccgtcagt tgatgatctt gatggggggc ggcgggccct
      601 gggggcgctg ccggtccttg gggatgaaga tggcgccaag gatggaggcg acgacgctcg
      661 acaccagggc gccgaagacg ccggcccaga agccgctcac ggtgaagttc aggcccagct
      721 tcgaggacag cccgccggcc agccagaaga tcaggccgtt gatgaccagg ctgaagcagc
      781 cgaaggagca ggccatgggc acgatggcga tgagcttgag gaaggtgccc agggtggcgt
      841 tcagggcacc gaggatcacg gccacgatca gcagatccag gaaggtccca tggccgaggc
      901 cgggcaccac ggaacaggcc accagcagcc cgatggcgga gaagaggaag cggagcaggg
      961 tggtcacgag ggcatcccgt ccttttcgtt ggcctgggtg atgacgctac ccggtggcac
     1021 gctgcgggtg agccacacgt tgccgccgat ggcggagccc ttcccgaggg tgatgcggcc
     1081 cagcaccgtg gcgttggagt agatgatgac gtcatcctcc accacgggat ggcgggggac
     1141 gcccttgacc gggtggccct cggcgtccag cgggaagctc ttggcgccca gcgtcacgcc
     1201 ctggtagatg cgcacgttgc ggccgatgac gcaggtctcg ccgatgacca cgccggtgcc
     1261 gtggtcgatg aagaaccgct cgccgatctg ggcgccaggg tggatgtcga tgccggtctg
     1321 gctgtgggcc agctcggtga tcatgcgggg cagcaggggc acgcccagct tcagcagctc
     1381 gtgggccagg cggtggttcg tgatggccag caggcccggg tagcagaaca gcacctcgtc
     1441 gggactggtg gccgccgggt cgccctcgaa gccggcctgg atgtccgcgg cgaggaggcg
     1501 gcgcacctcg ggcaggcggg ccagaaaggc ctgggcgagg tccagggagc gcttctcgca
     1561 gttcccgcag gcggggtcgg aggccatgag gcc
//
LOCUS       DATGWW010000191         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_327569, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000191 DATGWW010000000
VERSION     DATGWW010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327569"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..852)
                     /locus_tag="VK150_02800"
     CDS             complement(<1..852)
                     /locus_tag="VK150_02800"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HLP30262.1"
                     /translation="MPERIQIHPNAPVTAAGGAVRVVLLYSGFSGLWILLSDRVVGAL
                     VHDPELMTRVSIAKGWFFVAATAAMLFFLVRRQVRGVANREAKLQTLIHAIPDMVWLK
                     NGEGVYLGCNRAFERLFGAPEAEIIGKTDYDFVTKELADFFRQKDREAIEAGGTRENE
                     EWVTMAETGQAVLLETLKTPMYDDRGNLIGVLGIGRDITEHQKLLDERERLQAQLSQS
                     QKMELVGRFAGGVAHDYNNMLGVILANADLALYQMSQDRPERKNLEEIARAARHSADL
                     TRQLLGFA"
     gene            complement(901..>1618)
                     /locus_tag="VK150_02805"
     CDS             complement(901..>1618)
                     /locus_tag="VK150_02805"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30263.1"
                     /translation="LAEDEPLARARLARLLREAGCEVKAELADGPSVLAWLREPREVD
                     ALFLDIQMPGATGLEVHAELADCRHCPPVVFVTAYSEHAVRAFEAAALDYIVKPVSAE
                     RLAKTLARLREGGSRRVEAGQGVAQRFPVRAGEGHVFLELRRTTHFEVEEEVVWAWAS
                     VQGVPGRHRTAWTTLAEVEAAFPGAGLLRIQRHLLLRPEAVLGLKPLEGGRASVRVAE
                     GLDLEVSRSATPKIKEMLGL"
BASE COUNT          234 a          580 c          541 g          263 t
ORIGIN      
        1 ggcgaagccc agcagctggc gggtgaggtc ggcggagtgc cgggccgccc gggcgatttc
       61 ctcgaggttc ttccgctccg gtcggtcttg ggacatctgg tagagggcca ggtccgcatt
      121 cgcgaggatc acccccagca tgttgttgta gtcgtgggcc acaccgccgg cgaagcgccc
      181 caccagctcc atcttctgcg actggctgag ctgggcctgg aggcgctcgc gctcgtccag
      241 caatttctgg tgctcggtga tgtcccggcc gatgcccagc acgccgatca ggttgccccg
      301 gtcgtcgtac atcggggtct tgagcgtttc aagcagaacg gcctggcccg tttcggccat
      361 ggtcacccat tcctcgttct cccgggtgcc ccccgcctcg atggcctcac ggtctttctg
      421 gcggaagaag tcggcgagtt ccttcgtcac gaagtcgtag tccgtcttcc cgatgatctc
      481 ggcctccggg gcgccgaaca gccgctcgaa cgcgcggttg cagcccaggt agacgccttc
      541 gccgttcttc agccagacca tgtcggggat ggcgtggatg agggtctgca gcttggcttc
      601 gcggttggcc acgccccgca cctggcgcct caccaggaag aacagcatgg ccgccgtggc
      661 agccacgaag aaccagccct tggcgatgct gacccgggtc atgagctccg ggtcgtgcac
      721 cagggcgccc accacccggt cggacagcag gatccagagg ccggagaacc cactgtagag
      781 caggaccacc cgaacggccc ctccggcggc agtgaccggg gcgttcgggt ggatctggat
      841 ccgttcgggc atgcgggtgg ccctgcgtca actggggacg attgtccacc atgcttctcg
      901 tcagagcccc agcatttctt tgattttcgg ggtggcgctg cggctgactt ccaggtccag
      961 cccctcggcc acgcgcaccg acgcccggcc accttcgagg ggtttcaacc cgaggaccgc
     1021 ctccgggcgg aggagcaggt ggcgctggat gcggagcagg ccggctcccg ggaaggccgc
     1081 ttcgacttct gcgagggtgg tccaggccgt gcggtgccgt ccgggcacac cctggacgga
     1141 cgcccaggcc cagaccacct cctcctccac ctcgaagtgg gtcgtgcgcc tcaactccag
     1201 gaagacatgg ccctccccgg cccgcacggg aaaccgctgc gcgaccccct gcccggcctc
     1261 gacccgccgg ctcccccctt cccgcagccg ggcgagggtc ttggccaggc gctccgccga
     1321 cacgggcttc acgatgtagt ccagggccgc ggcctcgaag gcgcgcacgg cgtgttcgga
     1381 ataggcagtc acgaagacca cgggcgggca gtggcggcag tccgccagtt cggcgtgcac
     1441 ctcgagcccc gtcgcgcccg gcatctggat gtcgaggaac agggcgtcca cctcccgggg
     1501 ctcgcgcaac caggccagca ccgaggggcc gtcggccagc tcggccttca cttcgcagcc
     1561 cgcctccctt agcaggcgcg ccagccgggc gcgggccagg ggctcatcct ccgccaag
//
LOCUS       DATGWW010000192         1509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_370497, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000192 DATGWW010000000
VERSION     DATGWW010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370497"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            210..1421
                     /gene="tyrS"
                     /locus_tag="VK150_02810"
     CDS             210..1421
                     /gene="tyrS"
                     /locus_tag="VK150_02810"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HLP30264.1"
                     /translation="MPTLPTLDPWKTITRGVLEIIEEDDLRKKLAKGTPLKVKLGIDP
                     TSPNVHLGFTVVMRKLRQFQDLGHEVILIVGDYTATVGDPSGKNKTRPILTHEEVLKN
                     AETYKQQFFKIVDPARTRVVYNGEWFAKLSFTEVTRLMSQITVAQMLEREDFQKRYRG
                     GQPISLHEFLYPMMQAYDSVMIDADLELGGMDQKFNVLRGRELQRSLGKEPQVGLFLP
                     ILLGTDGKEKMSKSLGNDIGINEPPQSMYHKLYSLPDALVESYFELLTDAEMDGEGGI
                     RARLAEVAAGRLGPNVLKGELARAVTAQYHGAEAADKAAEQERKIHAGEALPDDLPVL
                     AVPAGSHWIPELIVKAGLAKSNGEARRLVENGGVSFDDVKVTDPKARAEVAGEHVLRC
                     GKRNYVRVRAD"
BASE COUNT          297 a          489 c          494 g          229 t
ORIGIN      
        1 tcgggccgcg cggcggactc cacatggtag atgaacagtc ggacgatgta gaagagcccg
       61 gcgaaccagc tcaccacggc gataaggtgg agggccttga ggtacggata ggcgcccatg
      121 ccgactgctc ccggaccccg gtttccctag ggcgggaagg ccccatggga cgcggaggat
      181 tgggaccaaa ggtactatct tttcccgcca tgccgaccct gccgaccctg gatccctgga
      241 agaccatcac ccgcggggtg ttggagataa tcgaggagga cgacctccgc aagaagctcg
      301 ctaaaggcac tccgctcaag gtgaagctgg gcatcgatcc cacctccccc aatgtccacc
      361 tgggcttcac cgtggtgatg cgcaagctgc gccagttcca ggacctgggc catgaagtca
      421 tcctcatcgt cggcgactac accgccacgg tgggcgatcc ttccggcaag aacaagaccc
      481 ggcccattct cacccacgaa gaggtgctga agaacgccga gacctacaag cagcagttct
      541 tcaagatagt ggaccccgcc cgcacccggg tggtgtataa cggggagtgg ttcgcgaagc
      601 tctccttcac cgaggtgact cgcctcatga gccagatcac cgtggctcag atgctggagc
      661 gcgaggactt ccagaagcgc tatcgcggcg gccagcccat cagcctgcac gaattcctct
      721 atcccatgat gcaagcttac gacagcgtca tgatcgacgc ggatctcgag ctcggcggca
      781 tggaccagaa gttcaacgtg ctgcgcgggc gcgagctgca gcggagcctg ggcaaggagc
      841 ctcaggtggg cctcttcctc cccatcctcc tcggcaccga tggcaaggaa aagatgtcca
      901 agagcctcgg caacgacatc ggcatcaatg agccgcccca gtccatgtac cacaagctct
      961 attcgctgcc ggacgccctg gtggagagct acttcgagct cctgaccgac gcggagatgg
     1021 acggggaggg cggcatccgc gcccgtctcg ccgaggtcgc cgcgggccgg ctgggtccca
     1081 acgtcctcaa gggcgaattg gcgcgcgccg tcacggccca gtaccacggc gccgaggccg
     1141 ccgacaaggc cgccgagcag gagcggaaga tccacgccgg cgaggccctg cccgatgatc
     1201 ttcccgtgct ggccgtgccc gcggggtccc actggatccc cgaactcatc gtgaaggccg
     1261 gcctggccaa gtccaacggc gaggcccgcc gactggtgga gaatgggggc gtctccttcg
     1321 acgatgtgaa ggtgaccgat cccaaggccc gggccgaggt tgccggcgag catgtcctgc
     1381 gctgcggcaa gcgcaactac gtgcgcgtcc gggcggactg aggcggccgg ggtccgtccc
     1441 ggcgcaaccc aggcgatctc agcgatcgag gatgacgagg agagtcgtgg gaattgagta
     1501 ggggagggg
//
LOCUS       DATGWW010000193         4327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_15184, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000193 DATGWW010000000
VERSION     DATGWW010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4327
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15184"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..656)
                     /locus_tag="VK150_02815"
     CDS             complement(<1..656)
                     /locus_tag="VK150_02815"
                     /inference="COORDINATES: protein motif:HMM:NF013071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HLP30265.1"
                     /translation="MRSIVWFRGKDLRVTDHGPLAEAAASGDVIPLFVLDPHFFRPDR
                     ARDLPHRMQFLLDSLQALAADLALLGSRLLVVPGRSVEVVPRLAAQWRVDRVLAHRWV
                     EPFGRERDRRVGEALGRSGIPFHLFEGETLLPPGSVRNGQGAMFRVFTPFARACWARL
                     DPGPALNAPKRLPPLPGGLGVDVVPVPTMAELGLSTNPRLQAGGEAAGGARLKAFVAG
                     P"
     gene            complement(718..1059)
                     /locus_tag="VK150_02820"
     CDS             complement(718..1059)
                     /locus_tag="VK150_02820"
                     /inference="COORDINATES: protein motif:HMM:NF012753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HLP30266.1"
                     /translation="MKLITAIIPEEKLDEVREALIEAEIERITVSRVSGHGRQQEIVV
                     QRGKKVVPNLIPKVQITIACNDEFEDITVDTIIRTARHGKGEVGDGKIFVQDLKECIR
                     IRTGERGGQAI"
     gene            complement(1068..2387)
                     /locus_tag="VK150_02825"
     CDS             complement(1068..2387)
                     /locus_tag="VK150_02825"
                     /inference="COORDINATES: protein motif:HMM:TIGR00836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HLP30267.1"
                     /translation="MTWKRAFPLAILGAGLPLAAQGAAPANDSGATAWLLTSTTLVLL
                     MVPGLAMFYGGLVRTKNVLGTMMHSFAAMAVVGVLWTVVGYALSFGPNALGGLIGWSR
                     GLVLLRSIDHTILPAGVPEYAFAMFQGKFAIITPALIAGAVAERITFRGWVAFITLWV
                     IFVYCPLCHWVWAPDGYFFNLGAKGAVDFAGGTVVHISSGVAGLALALFLGARHGYPK
                     TAMAPNNLTFTLIGAGLLWVGWFGFNAGSSIASNLETARALTVTQVAAAAGALTWVLL
                     ETIRDDKPTSLGMASGILAGLVVITPAAGVVQVGGALALGAIAACACFGMIILKNRLG
                     YDDSLDAFGIHGTGGIVGALGLTFFIRDSWWAEAAAKAPGWGLLAQLKVQGFAVGATI
                     LFSVVMTLLIAFLVEKVVGLRASEAVERTGLDHEIHGERAYGLNNLN"
     gene            complement(2511..3038)
                     /locus_tag="VK150_02830"
     CDS             complement(2511..3038)
                     /locus_tag="VK150_02830"
                     /inference="COORDINATES: protein motif:HMM:NF014659.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HLP30268.1"
                     /translation="MIIGIMIYEAPCLLVASPALLDPNFLHSVVLIVEHDEEGALGLI
                     LNRPLPLALSQVGEEGSMAYQGSEEATAWRGGPVDPQRGILLVQGGLPEEEDTVVDLT
                     HFVSHRKDLLVSLLGDATARYRLFLGYAGWGPGQLDQELEMGAWSRRPVVSDWLLHPD
                     PSGLWQVALESGAGS"
     gene            3063..3797
                     /locus_tag="VK150_02835"
     CDS             3063..3797
                     /locus_tag="VK150_02835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30269.1"
                     /translation="MPAPLPSHLGALREGLRLLRRHPLLSLGLIVLAMALSQLGPALE
                     LAAGVGPNLAFQPLFGLAGLLPLEMYFIPRLMAQLDAETVNGHGNPADGWQAAFDQRW
                     LRTFLVRLGLSVIIGLGLLAFLIPGIVILTLYGWAPLRMLLRGDALPAALKWSQGAMA
                     RHWPRIVQAVLAMLLVVLTYQLAAGWALDRLLPATDPDLGPGALLRLKHPAFWVLNLT
                     GGVLNLWLSCALLSLYHRLEAAAGPV"
     gene            complement(3806..4021)
                     /locus_tag="VK150_02840"
     CDS             complement(3806..4021)
                     /locus_tag="VK150_02840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30270.1"
                     /translation="MTVWARVNHVGWVHLWRRREDFDGAEPSAHFLNGRTDPRWLEAP
                     LSADQRRGLEAGELVEIEDPGYFIGED"
     gene            complement(4018..>4327)
                     /locus_tag="VK150_02845"
     CDS             complement(4018..>4327)
                     /locus_tag="VK150_02845"
                     /inference="COORDINATES: protein motif:HMM:NF013183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HLP30271.1"
                     /translation="AGAPLVLTCGGTGFGSRDTTPEATRRVIEREAPGICELIRAKGG
                     HPLAYASRAVCGIAGRTVVLNLSGRPAAALEQIQLAWPLLTHAVAVLRKEGEAGGPCT
                     "
BASE COUNT          649 a         1554 c         1503 g          621 t
ORIGIN      
        1 ggacccgcca cgaaagcctt cagccgcgcg ccccccgccg cctcgccacc ggcctggagc
       61 cgcgggttgg tcgagaggcc gagctcggcc atcgtcggga ccggcacgac gtccaccccc
      121 aagccaccgg gcaggggcgg cagacgcttc ggcgcgttca gagccggtcc cgggtccagc
      181 ctcgcccagc aggcccgcgc gaagggcgtg aacacccgga acatggcgcc ctgcccattc
      241 cgcaccgagc cgggcgggag cagggtctcg ccttcgaaga ggtggaacgg gatgcccgac
      301 cgcccgaggg cttcgcccac gcggcggtcc cgctcgcggc cgaagggctc cacccagcgg
      361 tgggccagca cccggtccac ccgccactgg gcggccaggc gcggcaccac ctccacgctg
      421 cgcccgggca ccaccagcag gcgcgagccg agcagcgcca gatccgccgc gagggcttgg
      481 agcgagtcca gcaggaactg catgcggtgc ggaaggtcgc gggcccggtc cgggcggaag
      541 aagtggggat ccagcacgaa gagcgggatc acgtcgcccg aggcggcggc ctccgccagc
      601 ggcccgtggt ccgtcaccct caggtccttg ccccggaacc acacgatgct gcgcatgaag
      661 ggagcctagc ggagatccgg ggtcggcagc cgcgggagaa cctggacgag gcggccttca
      721 gatggcctgg ccgccccgct cgcccgtgcg aatgcggatg cactccttca ggtcctggac
      781 gaagatcttc ccgtcgccga cctcgccctt gccgtgccgg gccgtgcgga tgatggtgtc
      841 caccgtgatg tcttcgaact catcgttgca ggcgatggtg atctgcacct tggggatgag
      901 gttcggcacg accttcttgc cgcgctgcac cacgatctcc tgctggcggc cgtggccgct
      961 cacgcgagag acggtgatgc gctcgatctc cgcttcgatc agggcctcgc ggacctcgtc
     1021 gagcttctct tcggggatga tggcggtaat cagcttcatg gcagccctca gttcaggttg
     1081 ttcaggccgt aggcgcgctc gccgtggatc tcgtgatcga ggccggtccg ttccaccgcc
     1141 tcgctcgccc gcaggcccac gaccttttcc accaggaagg cgatgaggag ggtcatgacg
     1201 accgagaaca ggatggtggc gcccacggcg aacccctgca ccttgagctg cgcgagcaga
     1261 ccccaccccg gcgccttggc cgccgcctcg gcccaccagg aatcgcggat gaagaaggtg
     1321 agcccgaggg ctcccacgat gcccccggtg ccgtggatgc cgaaggcgtc cagggagtcg
     1381 tcgtagccca ggcggttctt caggatgatc atgccgaagc aggcgcaggc ggcgatggcc
     1441 ccgagggcga gggcgccccc cacctgcacc acgcccgccg ccggggtgat gaccaccaga
     1501 ccggccagga tccccgacgc catgccgagg ctcgtgggct tgtcgtcgcg gatggtctcc
     1561 agcagcaccc aggtcagggc cccggcggcc gcggccacct gggtgacggt cagggcccgg
     1621 gcggtctcca ggttcgaggc gatggacgat cccgcgttga aaccgaacca gcccacccag
     1681 agcagccccg cgccgatgag ggtgaaggtc aggttgttgg gcgccatggc ggtcttggga
     1741 tagccgtggc gggcgcccag gaacagtgcc agggcgaggc cggcgacccc cgaggagatg
     1801 tgcaccaccg tgccgcccgc gaaatccacc gcgcccttcg cgcctaggtt gaaaaagtag
     1861 ccatccggcg cccacaccca gtggcagagc gggcagtaga cgaagatcac ccagagcgtg
     1921 atgaaggcca cccagccgcg gaaggtgatc cgctcggcca cggcgccggc gatgagcgcc
     1981 ggcgtgatga tggcgaactt gccctggaac atggcgaagg cgtattccgg caccccggcg
     2041 ggaaggatcg tgtggtcgat gctgcgcagc aggacgagtc cccggctcca gccgatgagc
     2101 ccgcccaggg cgttgggtcc gaagctcagc gcgtagccca ccacggtcca gagcacaccc
     2161 accacggcca tcgcggcgaa ggaatgcatc atcgtgccca gtacgttctt ggtgcgcacc
     2221 aggccgccgt agaacatggc caggcccggc accatcagga gcaccagggt ggtcgaagtg
     2281 agcagccagg ccgtggcccc ggaatcgttg gcgggggcgg ccccctgggc ggccaggggc
     2341 agccccgcgc ccaggatggc gagggggaac gcgcgcttcc aggtcatcgg ttcctccgag
     2401 agcaggggcg tggattgaac gtgtgagcag acgatgacca gagcctaccc cgaagcccgg
     2461 gcggttggtc tcccttccgt cactttttca ggttcgggaa gggtgcggcc tcagctgccc
     2521 gccccgcttt cgagggccac ctgccagagg cccgagggat cgggatgcag cagccaatcg
     2581 gagaccacgg gccgccgcga ccaggccccc atctccagtt cctggtccag ctggccgggg
     2641 ccccagccgg cgtagccgag gaacaggcgg tagcgggccg tggcatcgcc cagcagcgac
     2701 accagcaggt ccttgcggtg gctcacgaag tgggtgaggt ccaccacggt gtcttcttct
     2761 tcaggaaggc cgccctgcac caggaggatg ccccgctggg gatccaccgg tccgcctcgc
     2821 caggccgtgg cctcctcgga gccctggtag gccatgctgc cctcctcgcc cacctgggag
     2881 agggccaggg gcagcggccg gttgaggatc aggcccaggg cgccctcctc gtcatgctcg
     2941 acgatgagca cgacgctgtg taggaaattt ggatccagca gcgccgggct ggccaccagg
     3001 aggcaggggg cttcgtagat catgatgccg atgatcatag ccccaccggc taggctggag
     3061 tcatgcccgc acccctgccc tcccaccttg gcgccctccg cgaggggctc cgcctgcttc
     3121 gccgccatcc gctcctttcc ctcggcctga tcgtgctggc catggcgctc tcccagctgg
     3181 gcccggccct ggagctcgcc gcgggcgtgg gcccgaacct ggccttccag cccctgttcg
     3241 gcctggcggg acttctgccc ctggagatgt acttcatccc gcggctcatg gcccagctgg
     3301 atgccgagac ggtgaacggg cacggcaatc ccgcggacgg ctggcaggcc gcgttcgatc
     3361 agcggtggct cagaaccttc ctggtccgcc tcggcctgag cgtgatcatc gggctgggac
     3421 tcctggcttt cctcatcccg ggcatcgtga tcctcaccct gtatggctgg gcccctctgc
     3481 gcatgctcct ccgcggcgac gccctcccgg ccgccctgaa gtggagccag ggggccatgg
     3541 cccggcactg gccccgcatc gtgcaggcgg tgctggccat gctgctggtg gtgctcacct
     3601 atcagctggc cgccggctgg gccctggacc gcctgctgcc cgccacggac ccggacctgg
     3661 gccccggggc cctgctccgg ctgaaacacc ccgccttctg ggtcctcaac ctcacgggcg
     3721 gcgtgctgaa cctgtggctc agctgcgccc tgctgtccct ctaccaccgc ctggaagccg
     3781 cggccggccc ggtctgagtc ccgtctcagt cctcgccaat gaagtagccc ggatcctcga
     3841 tctccaccag ctcgccggcc tcgagcccgc gccgttggtc ggcactcagg ggggcctcga
     3901 gccaccgggg atccgtccgg ccattcagga aatgggccga gggctcggcg ccgtcgaaat
     3961 cctcgcggcg gcgccacagg tgcacccagc ccacatggtt gacgcgggcc cagacggtca
     4021 cgtgcagggc cctccggctt cgccctcttt ccggaggacc gccacggcat gggtcagcag
     4081 cggccaggcc agctggatct gctccagcgc cgccgcgggg cggcctgaca ggttgaggac
     4141 cacggtgcgt cccgcgatgc cgcagacggc ccggctggcg taggcgaggg ggtggccgcc
     4201 cttggcgcgg atgagctcgc agatgccggg ggcctcccgc tcgatgacgc gtcgcgtggc
     4261 ctcgggggtg gtgtcccggg agccgaagcc cgtgccgccg caggtgagta ccaggggcgc
     4321 gccggcc
//
LOCUS       DATGWW010000194         2660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_143891, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000194 DATGWW010000000
VERSION     DATGWW010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2660
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143891"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1822
                     /locus_tag="VK150_02850"
     CDS             <1..1822
                     /locus_tag="VK150_02850"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HLP30272.1"
                     /translation="ESPVLLGDHVTADTGTGLVHTAPDHGVDDFNLAHHLGLLQLVGP
                     DGKFVAAVNDPELEGKNIFDCNPLVVDKLRRIGALLHEETLTHSYPHCWRTKTPILFR
                     ATEQWFITMDSELNGKGRSLRELGIEGVEQTQWIPAQGQNRIHAMIAGRPDWCISRQR
                     AWGTPITVLRCEACGEPLVADSIFETAAAAIEQGGIEAWSELPVERLLPAGATCRCGG
                     TAFQKETDILDVWIDSGVSASVVCQSHPELSQADYSQFIYLEGSDQHRGWFHSSLLFN
                     LAATGTKPYKQVVTHGFVLDGKGQKMSKSLGNVITPEEILKTLGADILRWWAASCDYS
                     EDIRISKEILDRSADAYRKIRNTLRFLLGALADFDPVRDAVAPADLAPLDAWVLGAFA
                     RATVEARDAYTRFEFHRATQAIHGFCQLDLSGRYFEIIKDRLYCDALDSARRRSCRYA
                     CWELAKGLCTLLAPVMSFTADEAWEQIPGCSGSVHEQRFPELAAAAPDPAWEKLWEVR
                     EAVQAAMEPHRAAKTIGTSLDAQVALAVPARDRAALEGLGESLEDLLVVSGLDLTEGD
                     LAVTVSSHEGTKCPRCWNHKGGHGVGEDAALCLRCASVVA"
     gene            1822..2313
                     /gene="lspA"
                     /locus_tag="VK150_02855"
     CDS             1822..2313
                     /gene="lspA"
                     /locus_tag="VK150_02855"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:TIGR00077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HLP30273.1"
                     /translation="MRRLTWLLLPAVALAADLGSKAWILRTLAEGESMPIIRGFFYLT
                     LGFNRGAIFGSLTWLPAQARYIIFALAGLAALFYFGRLFLAKETSGWERVALGLILGG
                     ALGNGVDRILRGAVVDFLDFVFGTWHYWTFNLADSFILVGAILYGVRMLMAPKPEHRT
                     TEN"
     gene            complement(2405..>2660)
                     /locus_tag="VK150_02860"
     CDS             complement(2405..>2660)
                     /locus_tag="VK150_02860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30274.1"
                     /translation="YVTAGKWAEAKAAYEAAAKLAPGIWEMPFWQAVALASSGKVNEA
                     LPLFKQVFAAEPFWKRLVPRLADVDQLPKDPALLRAIEAQ"
BASE COUNT          414 a          956 c          864 g          426 t
ORIGIN      
        1 ggagagcccc gtgctgctgg gcgaccacgt caccgccgac accggcacgg gcctggtgca
       61 cacggcaccc gaccacggcg tggacgactt caacctggcc catcacctgg gcctgctcca
      121 gctggtgggc cccgacggca agttcgtcgc cgcggtcaat gaccccgagc tggagggcaa
      181 gaacatcttc gactgcaacc cgctggtggt ggacaagctc cgccgcatcg gtgcgctgct
      241 gcacgaggag accctgaccc acagctaccc ccactgctgg cgcaccaaga cccccatcct
      301 tttccgcgcc accgagcagt ggttcatcac catggattcg gagctgaacg ggaagggccg
      361 aagcctgcgt gagctgggca tcgagggggt cgagcagacc cagtggattc ccgcccaggg
      421 acagaaccgc atccacgcca tgatcgcggg ccgtcccgac tggtgcatca gccgtcagcg
      481 cgcctggggc acgcccatca ccgtgctgcg ctgcgaagcc tgcggcgagc ccctggtcgc
      541 cgattccatc ttcgagacgg ccgccgccgc catcgagcag ggcggcatcg aggcctggtc
      601 cgagctgccc gtggagcgcc tgctgcccgc cggggccacc tgccgctgcg gcggcaccgc
      661 cttccagaag gagacggaca tcctcgacgt gtggatcgac tccggcgtca gcgcctccgt
      721 ggtctgccag tcgcaccccg agctgagcca ggccgactac agccagttca tctacctgga
      781 gggctcagac cagcaccgtg gctggttcca cagctccctg ctcttcaacc tcgccgccac
      841 gggcaccaag ccctacaagc aggtggtcac ccacggcttc gttctggatg gcaagggcca
      901 gaagatgtcc aagagcctgg gcaacgtcat cacgcccgaa gagatcctga agacgctggg
      961 cgccgacatc ctgcgctggt gggcggcctc ctgcgactac agcgaggaca tccgcatctc
     1021 gaaggagatc ctcgaccgca gcgccgacgc ctaccggaag atccgcaaca ccctgcgctt
     1081 cctgctggga gccctggcgg atttcgaccc ggtccgggat gcggtggccc ccgccgacct
     1141 cgcgccgctg gacgcctggg tactcggcgc tttcgcccgc gccacggtgg aagcccgcga
     1201 cgcctacacg cgcttcgagt tccaccgcgc cacccaggcc atccacggct tctgccagct
     1261 ggacctgtcg ggccgctact tcgagatcat caaggaccgc ctctactgcg acgcgctgga
     1321 ttcggcccgc cgccggagtt gccggtacgc ctgctgggag ctggccaagg gcctctgcac
     1381 cctgctcgcg ccggtgatga gcttcaccgc cgacgaagcc tgggagcaga ttcccggctg
     1441 ttcgggcagc gtgcatgagc agcggttccc cgagctggcg gctgcagccc cagaccccgc
     1501 ctgggaaaaa ctgtgggagg tccgcgaggc cgtgcaggcc gccatggaac ctcaccgtgc
     1561 cgccaagacc atcggcacca gcctggacgc gcaggtggcc ctcgccgttc ccgcccggga
     1621 ccgggccgcc ctggagggtc tgggcgagtc gctggaggac ctgctcgtgg tctccggcct
     1681 ggacctcacg gaaggtgatc tcgccgtcac ggtgtccagc cacgaaggca ccaagtgccc
     1741 ccgctgctgg aaccacaagg gcggccatgg cgtcggcgag gacgccgcgc tgtgcctccg
     1801 ctgcgcctcg gtggtggcct agtgcgtcgc ctgacctggc tgctgcttcc cgccgtggcg
     1861 ctggccgcgg acctcggctc caaggcctgg atcctccgca ccctggcgga gggcgagtcc
     1921 atgcccatca tccggggctt cttctacctg accctgggct tcaaccgggg ggcgatcttc
     1981 ggcagcctca cctggctgcc ggcccaggcg cgctacatca tcttcgccct ggcgggcctg
     2041 gcggcgctgt tctacttcgg ccgcctcttc ctggcgaagg agacctccgg ctgggagcgg
     2101 gtggcgctgg ggctcatcct cggcggtgcc ctgggcaacg gggtggaccg catcctgcgc
     2161 ggcgccgtgg tggacttcct ggatttcgtc ttcggcactt ggcactactg gaccttcaac
     2221 ctggccgaca gcttcatcct cgtgggggcc atcctctacg gcgtgcggat gctgatggcg
     2281 ccgaaacccg agcatcggac caccgagaac tgatcaccgg ctttatttgc cacagatgaa
     2341 caccgatgga cccggatgaa gatccgaaaa accatctgtg ttcatctgcg gctgatccat
     2401 cccctcactg ggcctcgatg gccctcagga gggcggggtc cttcggcagc tgatccacat
     2461 cggcgaggcg cggcaccagg cgcttccaga agggctcggc ggcgaagacc tgcttgaaga
     2521 ggggcagagc ctcattcacc ttgccgctgg aggcgagggc caccgcctgc cagaagggca
     2581 tctcccagat gccgggcgcg agcttcgcgg cggcttcgta ggcggctttg gcttccgccc
     2641 acttgccggc ggtgacgtag
//
LOCUS       DATGWW010000195         2207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_327947, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000195 DATGWW010000000
VERSION     DATGWW010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327947"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..555
                     /locus_tag="VK150_02865"
     CDS             <1..555
                     /locus_tag="VK150_02865"
                     /inference="COORDINATES: protein motif:HMM:TIGR01670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HLP30275.1"
                     /translation="AHLDPSARERMARVRFVLTDVDGVLTTSHLLYDDRGVRQRAFST
                     RDGAAIQWLIRAGIPVGFLSALDDPSTRQRGLDLGVEELHLGAKDKLVTLQAILDRLV
                     LRPEELAYFGDDLVDLPVLASVGFSACPSDAAAEVRAACTWVFEPKGGEGFFRAAAES
                     ILKAQNHWDAIVARYRLPGHAPAE"
     gene            608..>2207
                     /locus_tag="VK150_02870"
     CDS             608..>2207
                     /locus_tag="VK150_02870"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HLP30276.1"
                     /translation="MTPRPRLSLCIPTYNRAACFQQALESGLREAAGLAPGQVELLVC
                     DNASTDGTGELLARAQAQHPDLKVFRNAENLGFDRNYLRCVEEATGEFVWVLGDDDVW
                     QPGAVARILRELAAGADACLCLSEACDLDLNPLVTLPWYLDAHPPLRWRLESRTDLIS
                     YFDSCARNAGVFAFISVAVFRRDRFLQALKGMTERLGPEAAQGYPHLLGMMAYLRQPL
                     SLHYVPEALIRNRMSDLHANSYANNDLYGRLLQDLHGWAQVADAVFGDDPEVHGAFSR
                     ILGRNHHNTILPSLRRCVPHRAAWLEAEPYLRRAGFSAVQIAAVDFGHQHAQGERLPM
                     ATLNPGALCLADLALVARGARRIAVLALGGLSNLLEGGSLLAALRLPGWLPRTRIYCT
                     MDCAALLDGFDIQCVDPKRYLADEAYRAGIAQGMADHAPELIVNLDPERGLEGDDLVM
                     AAQPAGALAFELPDRQQDAELIKAVTQAYQALLPRSAGVAAMVSILDLPPQEPALWPS
                     DATKEEAARVLAGLGWDAARTLAVL"
BASE COUNT          300 a          845 c          724 g          338 t
ORIGIN      
        1 gcccacctcg acccgtccgc ccgtgagcgg atggcgcgcg tccgcttcgt gctgaccgat
       61 gtcgacggcg tcctgacgac ctcgcacctg ctctacgacg accggggggt ccgccagcgg
      121 gctttcagca cgcgggacgg cgcggccatc cagtggctga tccgggccgg catacccgtg
      181 ggcttcctct ctgcgctcga cgaccccagc acccgccagc gcggcctgga cctgggcgtc
      241 gaggagctcc acctcggcgc caaggacaag ctggtcaccc tgcaggccat cctcgaccgg
      301 ctggtcctgc ggccagagga gctggcctac ttcggcgacg acctggtcga cctcccggtc
      361 ctcgcctcgg tgggcttctc ggcctgtccc tccgacgccg ccgccgaagt gcgggccgcc
      421 tgcacctggg tcttcgagcc gaagggcggc gagggcttct tccgggcggc ggcggaaagc
      481 atcctgaagg cccagaacca ctgggacgcc atcgtggccc gctaccggct tccggggcac
      541 gctcccgcgg aatgatcccc cggattcggc gccggtccgg cggtctatac tcgccctgga
      601 gcgcgccatg accccacgtc cccggttgtc cctgtgcatc cccacctaca accgcgcggc
      661 gtgtttccag caggccctgg agagcgggct ccgggaggcg gccgggctcg cgccgggcca
      721 ggtcgagctg ctggtgtgcg acaacgcctc gacagacggc acgggggaac tcctggcccg
      781 cgcccaggcc cagcaccccg acctgaaggt gttccggaac gcggagaacc tgggcttcga
      841 ccggaactac ctgcgctgtg tcgaggaggc caccggagag ttcgtgtggg tgctcggcga
      901 cgatgacgtc tggcagcccg gggcggtcgc ccgcatcctg cgggagctgg cggcgggcgc
      961 cgacgcctgt ctttgccttt ccgaagcctg cgacctggac ctgaatcccc tcgtcaccct
     1021 gccctggtac ctcgacgcgc atccacccct ccgctggcgg ctcgagagcc gtacggacct
     1081 gatcagctac ttcgacagtt gtgcccggaa tgccggcgtg ttcgccttca tcagcgtggc
     1141 ggtcttccgg agagaccgtt tcctccaggc cctgaagggc atgacggagc gcctcggccc
     1201 agaggccgcc cagggctatc cccacctgct cgggatgatg gcctacctcc gccagcccct
     1261 ctccctgcac tacgtccccg aagccctgat ccgcaaccgc atgagcgacc tgcacgccaa
     1321 ctcgtacgcg aacaatgatc tctacggccg gctgctgcag gacctccacg gctgggccca
     1381 ggtggcggac gcagtgttcg gggatgaccc cgaggtgcac ggcgctttct cgcggatcct
     1441 ggggcgcaac caccacaaca cgatccttcc cagcctgcgc cgttgcgtgc cccatcgtgc
     1501 cgcgtggctg gaggccgagc cgtacctgcg gcgggccgga ttctccgctg tccagatcgc
     1561 cgccgtggat ttcggccacc agcacgccca gggcgagcgc ctgcccatgg ccaccttgaa
     1621 ccccggcgcc ctgtgcctcg ccgacctggc cctggtggcg cgcggggccc ggcgcatcgc
     1681 cgtcctggcc ctcggcggcc tgtccaacct gctggagggg ggcagcctgc tcgccgccct
     1741 gcgcctgccc gggtggcttc cccgcacccg gatctactgc accatggact gcgccgccct
     1801 gctggacggg ttcgacatcc agtgcgtgga tcccaagcgc tacctcgccg acgaggccta
     1861 ccgggccggc atcgctcagg gcatggccga ccatgcgccc gagctgatcg tgaacctgga
     1921 tcctgagcgt ggcctcgaag gggatgacct tgtgatggcc gcccagcccg ccggagccct
     1981 cgccttcgag ctgcccgacc ggcagcagga cgccgagttg atcaaagcgg tgacgcaggc
     2041 ctaccaggcc ctgctccccc gaagcgccgg cgtggccgcc atggtctcga tcctcgacct
     2101 ccccccccag gaaccggccc tgtggccctc cgacgccacg aaggaagaag cggcgcgcgt
     2161 gctggccggc ctcggctggg acgcggcccg gaccctcgca gtgctcg
//
LOCUS       DATGWW010000196         5947 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_15424, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000196 DATGWW010000000
VERSION     DATGWW010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5947
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15424"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..852
                     /locus_tag="VK150_02875"
     CDS             106..852
                     /locus_tag="VK150_02875"
                     /inference="COORDINATES: protein motif:HMM:NF015340.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /protein_id="HLP30277.1"
                     /translation="MNNEIPIIPFHGQEGIQAVSAKTLYRELYDTDQFSRWAETNILS
                     NPHGKRGEDWVVSDIASETPQGGRPSQDYILRIDFAKKLAMMARSARGEQVRQYFLKC
                     EEMAQAPAPVRDWIAMSDEDKALAYFSERKARKAIEVARAEEAPLVAYAAKVQASPTS
                     FTVDTTAKELGLPVVKFREFVQAKYLFRRGRDWLPRAEYAGRGWFEVRTRTYDHNGVE
                     ITYHTTTVTGEGRIRLKDAWDRGHAVAEVA"
     gene            909..1094
                     /locus_tag="VK150_02880"
     CDS             909..1094
                     /locus_tag="VK150_02880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30278.1"
                     /translation="MELFKELYNRNGAAFTAFEEGFNIKPFLEACRWRMNLSEKDTEE
                     LNRAEDFLAEMIRKGRA"
     gene            1654..1959
                     /locus_tag="VK150_02885"
     CDS             1654..1959
                     /locus_tag="VK150_02885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30279.1"
                     /translation="MEAQRDQALALVAKSQDRAIRLLDKQNAKLDEQEAKLRTAEAQA
                     APQEGEALDLEAALGDLLAEHEDWIRSSSQGRVNPSERHTVIAARKALARLRAGRPA"
     gene            1956..2309
                     /locus_tag="VK150_02890"
     CDS             1956..2309
                     /locus_tag="VK150_02890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30280.1"
                     /translation="MNAPKTFTQPLHVTRRILACAVVLEDARRVPVAYLRGGRPEEEA
                     EYMAHAVNFHRALLEGLEKAALALESAAEGFELFGRPTLEREARDAQEAAELLLAQAR
                     GTVNDSLTVGGGRGA"
     gene            2299..2571
                     /locus_tag="VK150_02895"
     CDS             2299..2571
                     /locus_tag="VK150_02895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30281.1"
                     /translation="MALENFFALLYEVAAQFPGWAVAYVLPPITIILGLVFFLALVLQ
                     AKLKQDRKRRGVVEYTEEYPYVPRRAARAEVEESLNKHGIKTEADK"
     gene            2631..2852
                     /locus_tag="VK150_02900"
     CDS             2631..2852
                     /locus_tag="VK150_02900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30282.1"
                     /translation="MASLQDDLADALARYQASAAREREMFAKLFEVKQQLHHEKWLSA
                     SYRTLAKERRAVEEADDIEDMLREAEGSW"
     gene            complement(2963..3247)
                     /locus_tag="VK150_02905"
     CDS             complement(2963..3247)
                     /locus_tag="VK150_02905"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HLP30283.1"
                     /translation="MKAWRSGRELSQSQVAELLGISQAGYSKLEAGGVDTSLSTVAKA
                     AEVTGLSPGVLLGEARPEGGTITLDQALRALYLAGHRVTLEPLGGISPET"
     gene            complement(3284..3547)
                     /locus_tag="VK150_02910"
     CDS             complement(3284..3547)
                     /locus_tag="VK150_02910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30284.1"
                     /translation="MLGSLGFHGLFRGSQTEVDDGSDGREVGARMGSLDRLGDGRYFQ
                     VVFAEDPDLAEGFVLGFLEADSPGFSLASHRLSPLVIIYHWDK"
     gene            3546..3827
                     /locus_tag="VK150_02915"
     CDS             3546..3827
                     /locus_tag="VK150_02915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30285.1"
                     /translation="MSSTFCPVSASIDRYLRDIDQEQAEQEMEWDPELESLEATPEGR
                     EWMPDGRDATKAPPAYLNPRWILRMRRRLDHFRNTGRVDWMTHQGKVAK"
     gene            3824..4906
                     /locus_tag="VK150_02920"
     CDS             3824..4906
                     /locus_tag="VK150_02920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30286.1"
                     /translation="MSTNTEIEAALEAAEGEFAPVEVDKVKEHIVKTFDLTEAQIAVM
                     RERFSGLTIAGIEDKKGLEAVHAARVEVKSYRVEVEKVRKRLKEDSLAYGRKVDSVAK
                     HFTGLLLEIEKPLEEREEAVLVEKERIKAERQREADAKLQRRVDALNAVGHPISLGEL
                     VMMTDTAFELLLATATEANQAREKVRLEAEAALAAKLEAECLEAERKAREEAEARARR
                     EAELAEQEKALAARQAEIKAQEEALAAKARAMEQAAREETIRKEAEEKARLDAERARL
                     REEERKAQAAAEEKAKQEAAARRQAEVEAARPDAEKILAVATSFGTYKLPEMSTEAGK
                     AAMKDVAASLGRFCLYIEKKAEGLTK"
     gene            4903..5112
                     /locus_tag="VK150_02925"
     CDS             4903..5112
                     /locus_tag="VK150_02925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30287.1"
                     /translation="MTKEAREKFLARWIPWGMAKLARAEAYGIPWERIPLEQLDDHIH
                     LAEEFATPDEYKTKEARTTQKRARA"
     gene            5112..5762
                     /locus_tag="VK150_02930"
     CDS             5112..5762
                     /locus_tag="VK150_02930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30288.1"
                     /translation="MVDFTKYLKRNKPIEAKEAKMENEFMATYGEDSGPKELPSIGMH
                     QAVCAQVHSLGFQVFKGQVSFSPKCVFVFELDEKMKEGQMAGKPFVISERHGQYMGKP
                     GKSSNLRRFLEKWKGKEYTEEEAKATNIKKCEGQPCTLMIDHEPKDGGGFRAKIVGIS
                     RRDSSKPLVPITYTEVPKWIVEEKAKAVPPPNQQRQAQPQTAPAGVPPQAEDDLPF"
BASE COUNT         1320 a         1840 c         1918 g          869 t
ORIGIN      
        1 ccgcgacatc gtgcaggaag aggaaaaccg catcctgcgc gaagcagccg aaagcctgaa
       61 cccctgaagg taacccccca cccacatttc ccccaaggtg aacaaatgaa taacgaaatc
      121 cccatcatcc cattccacgg ccaagaaggc atccaggcgg tcagcgccaa aaccctatac
      181 agggagctct acgacactga ccaatttagc cggtgggcgg aaaccaacat cctttccaat
      241 ccccacggga agcgcggaga ggactgggta gtttccgaca tcgcgtcgga aaccccgcag
      301 ggtggccgtc cgagccagga ttacatcctc cgcatcgact tcgccaagaa gctggccatg
      361 atggcccgct ccgctcgcgg ggagcaggtc cgtcagtact tcctcaagtg cgaggagatg
      421 gcgcaggccc cggccccggt gcgggactgg atcgctatga gcgacgagga caaggctctg
      481 gcctacttct ccgagcggaa ggcccgtaag gctatagagg tcgcgcgcgc cgaggaggcg
      541 cccctggtgg cctacgccgc caaggtccag gcctcgccca cctccttcac cgtagacacc
      601 acggcaaagg agcttggcct gcctgtggtg aagttccggg agttcgtcca ggccaagtac
      661 ctgttccggc gcggccgcga ttggcttccc cgggccgagt atgccgggcg cggatggttc
      721 gaggtccgca ccaggaccta cgaccacaac ggggttgaga tcacttacca cacgaccacg
      781 gtgacgggcg aggggcgaat ccgcctcaag gacgcctggg accggggcca tgctgtcgcg
      841 gaggttgcgt aatggaaacc gcacaagagc acaccgaatc cctggccggc cttcccaccc
      901 ctcgcggcgt ggagctcttc aaagagcttt acaaccggaa cggcgcggcg ttcaccgcct
      961 tcgaggaggg ctttaacatc aaaccttttt tggaggcgtg ccggtggagg atgaacctgt
     1021 cggagaaaga cacggaggag ctgaaccgcg cggaggactt cctggccgag atgatcagga
     1081 agggcagggc atgagcgggg cggaacgaat caccctgctc ctacagcacg ggtacgcgct
     1141 gaccatgctg gagaggatcg aaatcatcaa gaggtacggg ccatgagcta cagacgcgaa
     1201 ccccggtatc tggatggcct cgcggcaaac ccaggtgcga cggatctggt catcgtcaag
     1261 gtctggctgc aagggctgga tgccgcgagg atgggagaga acagcaaccc gcatcccgtg
     1321 ggtacctggg agcactactc ctgggcagcg ggtcgagagg attgaagtag ttgggccgcg
     1381 ccgttcgagc ggccggcccg ggtccacgtc acaaccattg aaggagaaga caacgtgaac
     1441 gagagagaag ataagaattc tgttacgcat gcggcgggtc cttcggccct ggagccatgc
     1501 ccatggtgcg gcaagccggg caaggagttc ggcggcaagt atgccaagtg ccccgacatc
     1561 ttcggatgcc caggtggatc ggtttacgcc actatcgagg attggaaccg tcgcgccccc
     1621 gccccccagg gagcagcacc cgcaccggga ggggtggagg cccagcggga ccaagccctg
     1681 gccttggtcg ccaagtccca ggaccgcgcc atccggctat tggacaagca gaatgccaag
     1741 ctggacgagc aggaggcgaa gcttcgcacg gccgaagccc aggcggcccc ccaagagggg
     1801 gaggcgctgg acctggaggc cgccctcggt gacctcttgg cggaacacga ggattggatt
     1861 cgttccagta gccagggcag ggtgaaccct tcagagcgcc acacggtcat cgccgcacgt
     1921 aaggctctcg cccgcctccg cgccgggagg cccgcatgaa cgcccccaag accttcaccc
     1981 agcccctcca tgtcacccgc cgaattctcg cgtgtgccgt ggtcctagag gacgcccgcc
     2041 gtgtcccagt ggcctaccta cggggcggca ggccggagga ggaggccgag tacatggctc
     2101 acgcggtcaa tttccaccgc gccctactgg agggcctgga gaaagccgcc ttggccctgg
     2161 agtcagcggc ggaagggttc gagttgttcg gtaggccaac cctggaacgc gaggccaggg
     2221 atgcccagga agcggccgaa ctcctgctcg cccaggcgcg tggaaccgtc aacgattcct
     2281 tgacagttgg gggcggccgt ggcgcttgaa aactttttcg ccctcctgta cgaggtggcc
     2341 gcgcaattcc ctggttgggc cgtggcctac gtccttcctc ccatcaccat aattcttggt
     2401 cttgtgtttt tcctggccct tgtgctgcaa gccaagctca agcaggaccg caagcgccgg
     2461 ggcgtggtcg agtacaccga agagtacccc tatgttcccc gccgcgccgc gagggccgag
     2521 gtggaggagt cgctgaataa acacggaatc aaaacggagg ccgacaagtg atcaaatgga
     2581 tggttcgact cagccaaaaa tccgccgagt gttcccgcct acagaagcag gtggcatccc
     2641 tccaggatga cctcgccgac gccctcgccc gataccaggc cagcgcggcc agggaacggg
     2701 agatgttcgc caagctgttc gaggtcaaac agcagctaca ccatgaaaag tggttatccg
     2761 catcctaccg caccctcgcc aaggagcggc gggcggtgga ggaagcggat gatattgagg
     2821 acatgctgcg cgaggccgag gggagctggt gatggacgct ctccgagcct gggccgagaa
     2881 gaaaggccct caccgcctcg cggacctcgc ccgcctggtt atccggtcga gtgacgtgga
     2941 gttcgggcgc tgggccgagg tctcacgtct ccggggagat gccgcccagg ggttcgaggg
     3001 tgacgcggtg gccggccagg tagagggcgc ggagggcctg gtcgagggtg atggttccgc
     3061 cctccgggcg ggcttcgccc aggaggacgc ccggggaaag gccggtgacc tcggcagcct
     3121 tggcgacggt ggagaggctg gtatccaccc caccggcttc gagcttggaa taccccgcct
     3181 gggagattcc gagcaattcc gcaacctgag actggctcaa ttcgcgccca gatctccaag
     3241 ccttcataac ccggccgaat aatttattca aatcgattga caatcactta tcccagtgat
     3301 agattataac caagggcgat aaacgatgac tcgcaagact aaatccaggc gaatcagcct
     3361 caaggaaccc caagacaaag ccttccgcca agtctggatc ctccgcgaag accacctgga
     3421 aataccttcc atcgccaagg cgatcaaggc tgcccatccg ggcaccgact tcccgaccat
     3481 cgcttccgtc atccacttct gtttgactgc cgcgaaaaag accgtggaaa cccagggagc
     3541 ctaacatgtc ctccaccttc tgccccgtct ccgcctccat cgaccgctat ctccgcgaca
     3601 tcgaccagga gcaggccgag caggagatgg agtgggaccc ggagctggag agcctggaag
     3661 ctacccccga gggccgggag tggatgccgg acgggcggga cgccaccaag gctccgcctg
     3721 cctacctgaa cccccgttgg atcctacgga tgcgccggcg cctggaccac tttcgaaata
     3781 ccggccgagt tgactggatg acccaccaag gaaaggttgc aaaatgagca cgaacacaga
     3841 aatagaagcc gccctcgaag ccgcggaagg ggaattcgcc ccggtcgagg tggacaaggt
     3901 caaggagcat atcgtcaaga ccttcgacct caccgaggcc cagatagcgg tgatgcggga
     3961 gcggttctcc ggcctcacca tcgccggcat tgaggacaag aagggtctgg aggccgtcca
     4021 cgccgcccgg gtggaggtga agtcctaccg ggtcgaggtg gagaaggtga gaaagcgcct
     4081 caaggaggac tccctggcct acggccgcaa ggtggattcc gtggcgaagc acttcactgg
     4141 cctgctcctc gagatcgaga agcccctgga ggagcgggag gaggcggtcc tggtcgagaa
     4201 ggagcgtatc aaggccgagc ggcaacggga ggcggacgcc aagctccagc gccgggtgga
     4261 cgccttgaac gccgtgggac accccatttc cctgggcgag ctggtcatga tgactgatac
     4321 cgcattcgag ctcctcctgg cgaccgccac cgaggccaac caggcccggg agaaggtccg
     4381 cctggaggcc gaggccgccc tggccgcgaa gctggaagct gagtgcctgg aagcggagcg
     4441 gaaggcccgg gaggaagcag aggcccgcgc gcgccgggag gccgagctgg ccgagcagga
     4501 gaaggccctg gccgcccgcc aggccgagat caaggcccag gaggaagccc tggccgcgaa
     4561 ggcccgcgcc atggagcagg cagcccggga agagaccatc cgcaaggagg ccgaggaaaa
     4621 ggctcgcctg gatgccgagc gcgcccgcct gcgggaggag gagcggaagg cccaggccgc
     4681 cgcagaagag aaggccaagc aggaagccgc cgcccgccgc caggccgagg tcgaggccgc
     4741 ccgccccgac gctgagaaga tcctcgccgt cgccacctcc ttcgggacct acaagctccc
     4801 ggagatgtcc accgaggcgg gcaaggccgc catgaaggac gtggccgcat ccctgggccg
     4861 gttctgcctc tacatcgaga agaaggcgga agggctgacg aaatgaccaa ggaggcgcgc
     4921 gaaaagttcc tggcccggtg gattccgtgg ggcatggcga agctggcgcg cgccgaagcc
     4981 tacggcatcc cctgggagcg gatcccgctg gagcaactag acgaccacat tcacctcgcc
     5041 gaggagttcg ccacccccga cgagtacaag accaaggagg cccgcaccac acaaaaacga
     5101 gcacgcgcgt aatggtcgat tttaccaagt atttgaaacg caataagccc atagaggcaa
     5161 aggaagcgaa aatggaaaac gaattcatgg caacatacgg cgaagacagc ggccccaagg
     5221 aactcccgag catcggcatg catcaggcgg tatgcgccca ggtccacagc ctcggatttc
     5281 aggtgttcaa gggccaggtc tctttcagtc ccaagtgcgt cttcgtgttc gagctggacg
     5341 agaagatgaa ggaaggccag atggccggca agcccttcgt gatctccgag cggcacggcc
     5401 agtacatggg caagccgggc aagtcctcca acctccggag gttcctggag aagtggaagg
     5461 gcaaggagta caccgaggag gaggcgaagg cgacgaacat caagaagtgc gaggggcagc
     5521 cctgcacact gatgatcgat catgagccta aggacggcgg cggattccgc gcaaagattg
     5581 tcggaatcag ccgccgcgac tcctcgaagc ccttggtgcc catcacctac accgaggtgc
     5641 cgaagtggat tgtggaggag aaggcgaagg cggtaccacc tccgaaccag cagaggcagg
     5701 cccagccaca gacggccccc gcaggtgtcc cgccgcaagc ggaagacgac cttcccttct
     5761 gagaacgacg gggaagtcgg atacttccct ctccccctgg tcggagcgaa ggccaggaac
     5821 gaattttact aatgactcaa agacaataaa tagtagtaga aatcactaga caaaaccgta
     5881 accgatacgg taccttagat taccccggga ggaagacggg acaatgggac atccagctaa
     5941 aaaacac
//
LOCUS       DATGWW010000197         1911 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_62603, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000197 DATGWW010000000
VERSION     DATGWW010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62603"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VK150_02935"
     CDS             complement(<1..509)
                     /locus_tag="VK150_02935"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLP30289.1"
                     /translation="MKILIHDYAGHPFQVQLSRVLAARGHDVVHAFATSLQTPRGELA
                     PKPGDAATLRLQPVEMGAGYVRHKYSFVRRRGLEIAYGKRVASLIAAERPDVVLSSNT
                     PTETQESIVQACRAQGAAFYYWVQDFYSLAVDKLLRKKLPVLGALAGAYYRWLEGRQL
                     RGAAGVVAIT"
     gene            complement(735..1832)
                     /locus_tag="VK150_02940"
     CDS             complement(735..1832)
                     /locus_tag="VK150_02940"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HLP30290.1"
                     /translation="MGILRLLLALWVVAMHGRGFLGLEVTQAWVAVQCFFIISGFYIT
                     LILNEKYTGPGSTRLFLSQRFLRLLPVYWAVLLLTLAASGLAWGWWGHALPPLQTWLD
                     HHPSMHGGAKAFLASANVLLFGQAEALFLGLDPAAGTLYWTTDFSVSEPMVWHFLAVP
                     QAWSIELELLFYALAPWIVRRPLPVVLGVLGASFAARLACYTVFGLRTDPWTYRFFPN
                     ELGMFLLGAVAYALYRSPWRARAAEGLWIWGLFACFFAFTLAFPFIPLRGQLKAWPYF
                     ALATLTIPFLFAETRNLRWDRWIGELSYPVYLIHFLVIWICEAALPPAAQKNLGLWAI
                     IGSIAVSIVLLRTLLEPFERWRARRAPRLLA"
BASE COUNT          387 a          594 c          670 g          260 t
ORIGIN      
        1 gtgatggcca ccacccccgc cgcaccgcgc aactgcctcc cctccagcca ccggtaatac
       61 gcgcccgcca gcgcccccag cacaggcagc tttttgcgca gcagcttgtc caccgccagg
      121 ctgtaaaaat cctgcaccca ataataaaag gccgccccct gcgcccggca ggcctgcaca
      181 atcgactcct gcgtctcggt gggcgtgttc gaggacagca ccacgtccgg tcgctccgcc
      241 gcaatcagcg aagccacccg cttgccgtag gcgatctcca gtccgcgccg ccggacaaac
      301 gaatacttgt gccgcacata ccccgccccc atttccaccg gctgcagcct cagcgtcgcc
      361 gcgtccccgg gtttcggcgc caattcccca cgcggcgtct gcagcgaagt ggcaaaagca
      421 tgcaccacat catggccgcg cgccgccagc acccggctga gttgcacctg gaagggatgc
      481 cccgcgtaat cgtgaatgag aattttcatt tcggagtgcc gcaatttaga taaaaatcat
      541 acaaaaggca agcccttctt tagaatttcc gtaacttgca ggcttatcgg taaagccctg
      601 atggggctgc cagccgcccg ttggggccgg ccggcgggag caatggccgg gggcgagccg
      661 gtcgcgggca cagtcgaggg gggctgaggg ggccggcgct ggggtgttcc gccgggtccg
      721 ggtccgggtc ctggtcaggc tagcaggcgg ggggcgcggc gggcgcgcca gcgttcgaag
      781 ggttcgagga gggtgcggag caggacgatg gagacggcga tgcttccgat gatggcccag
      841 aggccgaggt ttttttgggc ggcggggggc agggcggcct cgcagatcca gatcacgagg
      901 aagtggatga ggtagaccgg atagctcagc tcgccgatcc agcgatccca gcgcagattc
      961 cgcgtttcgg cgaagaggaa ggggatggtg agggtggcga gggcgaagta gggccaggcc
     1021 ttgagctggc cgcggagcgg gatgaagggg aaggcgagag tgaaggcgaa gaagcaggca
     1081 aagagccccc agatccagag gccttcggcg gcacgggcgc gccaggggga tcggtagagg
     1141 gcgtaggcga ctgcgccgag caggaacatg cccagctcgt tggggaaaaa ccggtaggtc
     1201 caggggtccg tgcgcagacc gaagacggtg tagcacgcca gacgggcggc gaagctggcc
     1261 ccgagcaccc cgagcaccac ggggagcggc cggcgcacga tccagggcgc cagcgcataa
     1321 aacaacagtt cgagctcgat cgaccaggct tgggggacgg cgaggaaatg ccagaccatg
     1381 ggctcgctca cgctgaaatc ggtcgtccaa taaagcgtgc ccgcggccgg gtccaggccg
     1441 aggaaaagcg cctccgcctg gccgaagagg agcacgttgg ccgaggccag gaacgccttg
     1501 gcgccgccgt gcatcgacgg atgatggtcg agccacgtct gcagcggcgg cagggcatgc
     1561 ccccaccagc cccaggccag tccgctggcg gccagggtga ggagcagcac ggcccagtac
     1621 accggcagaa ggcgcagaaa ccgctggctc agaaagaggc gggtgctgcc gggtcctgtg
     1681 tatttctcgt tcaggatcag tgtaatatag aatccggaaa tgatgaagaa acattgcacc
     1741 gcgacccacg cctgcgtgac ttccagcccg agaaagcccc gcccatgcat ggcgaccacc
     1801 cacagggcca gaagaagtcg cagaatgccc atgccgcagg atcgataaaa caggtgtcag
     1861 cggcgggacg gccgaacggt gtcgggcggc gcgggggtcc gccggcggcg c
//
LOCUS       DATGWW010000198         2071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_15881, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000198 DATGWW010000000
VERSION     DATGWW010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15881"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1089
                     /locus_tag="VK150_02945"
     CDS             <1..1089
                     /locus_tag="VK150_02945"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30291.1"
                     /translation="DRSEKEQTELVAKNARQKEEWEGLTDQLQEKLLALADQIQSLHE
                     RMEKEEEARDQAKAVYDAKVGRLDELRTIIRNLNDELRGLTARNHDSALKMEQARAAM
                     ANIRERMFELHEVDLSNPVKPGDGEDGEPAPAFERVEYDPATAQEEITSYKDKLKNLG
                     NINPGALEDYEAEKARLEEVNKQYQDLEKARLGLEKAIKKLDKVAREQFLETFGIVQK
                     NFQEVFSSLFEGGEAQLALEDNVDPLDAKIEINARPTGKKMRGVSLLSGGERALTAIS
                     LLFALYLVRPSPYCIMDEVDGPLDDANIGRFVNLLRRFSHQTQFIVVTHNKRTMAASD
                     MLYGVTQEIKGISKLVSVQLDEASRIAA"
     gene            1190..>2071
                     /locus_tag="VK150_02950"
     CDS             1190..>2071
                     /locus_tag="VK150_02950"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HLP30292.1"
                     /translation="MTTASQPLLYRAVNYLTRTHTRERRRNIWAQVEAKAERSSNLIR
                     IGYVSVWILCTVAHVPGNPFWSNVANLGVGGFWLLWAMGYQAYLLRYPYHAKLKYLST
                     TVDMVVITSMLYLYSFSAGPAYALKVPAFLNYFCCLGLAAMRYRLFLALYGGALAAVL
                     YLVVYAVFLAQYSPALGSGVEHTLGPFINPGYVFFNVVYLLNFTFLTYFLVYNVKRLV
                     DLRIREGEAAVKAKERAAMAASVAHEIKNPLEGIYGAAQLLKEEGKGNGRFVDMILKD
                     SVRLNGVVQQFLQFSRPF"
BASE COUNT          404 a          676 c          628 g          363 t
ORIGIN      
        1 gatcggtccg agaaggagca gaccgagctc gtggccaaga acgcccggca gaaggaggag
       61 tgggagggtc tcaccgacca gctccaggag aagcttctgg cccttgccga ccagatccag
      121 tcgcttcacg agcgcatgga gaaagaggag gaggctcgcg accaggccaa ggccgtctat
      181 gacgccaagg tgggccgcct cgacgagctc cgtaccatca tccgcaacct caatgacgag
      241 ctgcgcggcc tcaccgcgcg gaaccatgac tcggccctca agatggagca ggctcgcgcc
      301 gccatggcca atatccgcga gcgcatgttc gaactccacg aggtggacct ctccaacccc
      361 gtgaagcccg gcgacggaga ggacggcgag ccggcgcccg ccttcgagcg cgtggaatac
      421 gatccggcga cggcccagga ggagatcacc tcctacaagg acaaactgaa gaacctgggg
      481 aacatcaacc ccggcgccct cgaggactac gaggcggaga aggcccgcct cgaggaggtg
      541 aacaagcagt accaggatct ggagaaggcg cgcctggggc tggagaaggc catcaagaag
      601 ctcgacaagg tggcgcgcga gcagttcctc gagactttcg gcatcgtgca gaagaacttc
      661 caggaggtat tctcgagcct gttcgaggga ggcgaggccc aactcgccct cgaggacaac
      721 gtggaccccc tcgacgccaa gatcgaaatc aacgcgcggc ccacgggcaa gaagatgcgg
      781 ggtgtcagcc tcctctccgg cggcgagcgc gccctcacgg cgatctccct gctgttcgcc
      841 ctgtacctcg tccgcccctc cccctattgc atcatggacg aggtggacgg cccgctggac
      901 gacgccaata tcggccgctt cgtgaacctg ctcaggcgct tcagccacca gacccagttc
      961 atcgtggtga cccacaacaa gcgcaccatg gcggcttcgg acatgctcta tggcgtgacc
     1021 caggagatca aggggatttc gaagctggtg agcgtgcagt tggacgaggc gagcaggata
     1081 gcggcgtgag gagagagagt gacaagtgtc cagtgacaag tgaccagttt aagaggtccg
     1141 gtgtcccaac tggtcacttg tcactggtca ctggccacta gttcgttaca tgaccaccgc
     1201 ctcccaaccc ctcctctacc gcgccgtcaa ctacctcacc cgcacccata cccgcgagcg
     1261 gcggcggaac atctgggctc aggtcgaggc caaggcggaa cgttcctcca acctgattcg
     1321 catcggctat gtgtcggtgt ggatcctctg caccgttgcc cacgttcccg gcaacccctt
     1381 ctggtccaat gtcgccaacc tcggagtggg gggcttctgg ctcctttggg ccatggggta
     1441 tcaggcgtac cttctgcgct acccctacca tgccaagctc aagtacctct ccaccacagt
     1501 ggacatggtg gtcatcacct ccatgctcta cctctattcc ttctccgccg gcccggccta
     1561 cgctctcaag gttcccgcct tcctcaacta cttctgctgc ctcggcctag cggccatgcg
     1621 gtaccggctc tttctggccc tctatggcgg ggcgttggcg gcggtcctgt acctggtggt
     1681 gtacgctgtc ttcctggcgc agtacagccc ggcccttgga tcgggggtgg agcataccct
     1741 ggggcccttc atcaatccgg gctatgtgtt cttcaacgtg gtgtacctgc tcaacttcac
     1801 cttcctgacc tacttcctgg tatacaacgt gaagcgcctc gtggacctgc gcatccgcga
     1861 gggcgaggcg gcggtgaagg ccaaggagcg cgccgccatg gccgccagcg tcgctcacga
     1921 gatcaagaac cccctggagg gcatctacgg agccgcccag cttctcaagg aggagggcaa
     1981 ggggaacggc cgcttcgtgg acatgatcct gaaggactcg gtgcggctga atggagtggt
     2041 gcagcaattc ctgcagttct cccggccctt c
//
LOCUS       DATGWW010000199         2694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_370912, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000199 DATGWW010000000
VERSION     DATGWW010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2694
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370912"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..827)
                     /locus_tag="VK150_02955"
     CDS             complement(45..827)
                     /locus_tag="VK150_02955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30293.1"
                     /translation="MNAPSPLATVRATAMGYAPRVLQGRGWVVAGLLAVPVGLSLVIS
                     MVARIKGMDGDPAEVLRIFHEVLVKMMLPIMALVAAPAGIREDLEQRTLPLLLVRPAP
                     AWALPLGKGLPWFLWGALWLILGALGLQAVGGDPSLLLGRIAALVGAWWGELALMTLA
                     GLLFKRGTLWGALYFFIWEPLVRIFPPFLQRLTFTHHIESLAGSRAAQVQTHQLLAQE
                     QVTTHPAVALLALLAFGIICWALAGWKLHRTPVGLAGSEAEG"
     gene            complement(838..1758)
                     /locus_tag="VK150_02960"
     CDS             complement(838..1758)
                     /locus_tag="VK150_02960"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLP30294.1"
                     /translation="MISLDRASLRYGPILGLSPTTFHLPDGGGITGLLGPNGAGKSSL
                     LQLLSGLLPPSGGEVKVFGQAPFRNPDVLARLGMVPEGDRLPMGLRADRWLRMMGELS
                     GLSGDGLGAAVARSLETVGMADRAHLTFTRMSKGMRQRIRLAQALLHNPQLLILDEPF
                     NGLDPEARLTLMALLRDLAARGTRILVSSHILGEIAQLTDRILLLFRGRLLAEGTVTE
                     IRQLLDRHPVELRLTGEAQVLARWAVEQPELAALRMEEGAVVLSIRSPRDLLPRLQRA
                     AAEGGVPLEALDPLDLNLDAVFQYLTKDHA"
     gene            complement(1758..2618)
                     /locus_tag="VK150_02965"
     CDS             complement(1758..2618)
                     /locus_tag="VK150_02965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30295.1"
                     /translation="MPIYAPTLPPAPDLHLGQPPALVLMRFDLARLWRQKIGRFFGFS
                     FLVVLLWKVARIYVDQLLQTNQAFKPMQDFAKTILTQGAEFQADLLNPTSYLLWFLVA
                     LVGGGLVARDTLYRVRPLMYAHPVAPKDYLLAKLGFASGLPFLILLPFALLPWLMSLL
                     LAGLNGPVWATAPLRLLPAMAISSVLMGSLAVGASSMAATPRAGIGWVLGLVLGAGTL
                     ASMIQGLTGFRAISALNPVLLAEAWPQLFVGVSRPLVDWLPAILGTAFHIGLWTYVAA
                     RRTRPSEAVI"
BASE COUNT          461 a          884 c         1030 g          319 t
ORIGIN      
        1 gtgaaatctg tggacaaccg ctgttcccgc gacgctccgt acgactaccc ctccgcctcg
       61 ctccccgcca ggcccacggg cgtccggtgc agtttccagc ccgcgagggc ccagcagatg
      121 atgccgaagg ccagcagggc cagcagggcc acggcgggat gggtggtcac ctgctcctgg
      181 gccagcagct gatgggtctg cacctgggcg gcgcggctgc ccgcgaggct ctcgatatgg
      241 tgggtgaagg tgagccgctg caggaagggc gggaagatgc ggacgagggg ttcccagatg
      301 aagaagtaga gggcgcccca gagggtgccg cgcttgaaga ggaggcccgc cagggtcatg
      361 agggccagtt cgccccacca ggcccccacc agcgccgcga tgcggccgag cagcagcgac
      421 ggatccccgc ccacggcctg gaggcccagc gcgcccagga tgagccacag ggcgccccac
      481 aggaaccagg gcaggccctt gcctagcggc aaggcccagg ctggcgccgg ccgcacgagc
      541 agcagcggga gcgtccgctg ctccaggtcc tcgcggatgc ccgccggggc ggccaccagg
      601 gccatgatgg gcagcatcat cttcacgagc acctcgtgga agatgcggag gacttccgcc
      661 ggatcgccat ccatgccctt gatccgggcc accatcgaga tgaccaggct aagacccacg
      721 ggcaccgcca gcaggccggc gaccacccag ccgcggccct gcagaacccg aggggcgtac
      781 cccatggccg tggcgcgcac cgttgcgagg ggagatgggg cgttcatgcg ggctccctca
      841 ggcatggtct ttggtcaggt actggaagac cgcgtccagg ttcaggtcca ggggatccag
      901 ggcctcgagt ggcacgccgc cttcggccgc cgcccgctgc aggcgcggca ggaggtcgcg
      961 gggagagcgg atggacagca ccaccgcgcc ctcctccatg cgcagcgcgg ccagctccgg
     1021 ctgctccacc gcccagcggg cgaggacctg cgcctcgccc gtgaggcgga gctccaccgg
     1081 gtggcgatcc agcagctggc ggatctcggt gacggtgccc tcggccagca ggcgcccgcg
     1141 gaacagcagg aggatgcggt ccgtgagctg ggcgatctcg cccaggatgt ggctcgacac
     1201 caggatgcgg gtgccgcggg ccgccaggtc gcggagcagg gccatgaggg tgagccgcgc
     1261 ctcggggtcg agaccgttga agggctcgtc aagaatgagc agctgcgggt tgtgcagcag
     1321 ggcctgggcc agccggatgc gctggcgcat gcccttggac atccgggtga aggtcaggtg
     1381 ggcgcggtcg gccatgccga cggtttcgag ggaccgggcc accgcggcgc cgaggccgtc
     1441 gccggagaga cctgagagct cgcccatcat gcgcagccag cggtcggcgc gcaggcccat
     1501 gggcaggcgg tcgccctcgg gcaccatgcc caggcgggcg agcacgtcgg gattgcggaa
     1561 aggggcctgc ccgaatacct tcacctcgcc gccggacggt ggcagcaggc ccgagagcag
     1621 ctgcagcaag gacgacttgc cggcgccgtt ggggcccagc aggcccgtga tgccgccgcc
     1681 gtccggcagg tggaaggtgg tggggctgag gcccaggatg gggccgtagc ggagggaggc
     1741 gcggtcgagg gaaatcatca gatcaccgcc tccgagggac gggtgcgccg ggcggccaca
     1801 taggtccaga ggccgatgtg gaaggcggtg ccgaggatcg ccggcagcca gtccaccagc
     1861 ggccggctca cgccgacgaa gagctgcggc caggcttcgg ccagcagcac cggattcagg
     1921 gcgctgatgg cccggaagcc cgtgagtccc tggatcatcg acgccagggt gccggcgccg
     1981 agcaccaggc ccagcaccca gccgatgccc gcccggggcg tggccgccat gctggaggcg
     2041 cccacggcca gcgaacccat cagcaccgag ctgatggcca tggcgggcag caggcgcagg
     2101 ggcgcggtgg cccagacggg gccgttcagg cccgccagca gcagggacat aagccagggc
     2161 agcagggcga agggcaggag gatgaggaag ggcaggcccg aagcaaagcc cagcttggcc
     2221 aggaggtagt ccttcggggc cacggggtgg gcatacatca gggggcgcac gcggtagagc
     2281 gtgtcccgcg ccaccaggcc gccgcccacc agggccacga ggaaccagag gaggtagctg
     2341 gtgggattga ggagatccgc ctggaattcc gcgccctggg tcaggatggt cttcgcgaaa
     2401 tcctgcatgg gcttgaaggc ctggttcgtc tggagcagtt ggtccacgta gatgcgcgcc
     2461 accttccaga ggagcaccac gaggaaggaa aagccgaaga agcggccgat cttctggcgc
     2521 cagagccgcg ccaggtcgaa gcgcatgagc accagggccg gaggctggcc cagatgcagg
     2581 tccggcgcgg ggggcagcgt gggagcgtag atgggcatct caggcctccc tctgggacga
     2641 gggccccgtc gatggcgtta agtccggagc aggctccgct tgatccggac gcgg
//
LOCUS       DATGWW010000200         2660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_328872, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000200 DATGWW010000000
VERSION     DATGWW010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2660
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_328872"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VK150_02970"
     CDS             complement(<1..332)
                     /locus_tag="VK150_02970"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HLP30296.1"
                     /translation="MKRNTWIGLGIGVAVVAGGGWWAFRKPAEEIKWRSAKVERGGIT
                     QRINATGSVSPVVQVAVGTQVSGVISALYVDYNSIVKKGQLIAQIDPTIWETQLKDAE
                     AGLERART"
     gene            complement(444..1943)
                     /locus_tag="VK150_02975"
     CDS             complement(444..1943)
                     /locus_tag="VK150_02975"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HLP30297.1"
                     /translation="MSLTPSQWAALLPLLLPALGGCLIPLMSLDKDQATAKWIRAVMY
                     GTALLAVGASFWYLTDLWVTGAQPSFYQLRMDRLAQFTGIFVLVASALTILQSWDHFH
                     QEGWVKGETLSLLLFSVTGMLLFASTSHFVVLFLALELFSIPLYAMVGTVRLRPESAE
                     GGMKYFITGAVASSCFLMGGVLIYGLSGTLDLTAAALTLKAQGLAADPLVLAGAALML
                     LGFLFKVSAVPFHQWTPDAYEASPHPIAGFMSVATKGVAFIALLRIFPGSLAPLGTVG
                     VKMQAVMAVLAVATLVAGNLTALVQTNVKRMLAYSSISHAGYLMLGFVAGTPAAFNGV
                     LFYLVIYLAMNLGAFGLLTAFGMVGDKTTFDDMRGLGWKRPAMGISAAIFMLSLAGIP
                     PLGGFYGKYMIFRELVGTGHVGMAILGVLASLVSAYYYLRLLVALFLQAPSAEAERLA
                     SDRPAVHAPLAGATVLVSAVIVLAGGFLQAFLADGFAKRALTEGLGLIR"
     gene            complement(1940..>2660)
                     /locus_tag="VK150_02980"
     CDS             complement(1940..>2660)
                     /locus_tag="VK150_02980"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HLP30298.1"
                     /translation="VAYSSVSHMGFVMLGLASFTVIGTQGAMLQMLNHGISTGALFLL
                     VGMLYDRAHTRMIADFGGVAVKMPIFTTFFFIVTLSSIGLPLTNGFVGEFWILNGTFL
                     SGFNWGRLYACLATSGVLLGAVYMLWMFKRVFWGAENKDEDSGTHHLHSDLNAREIAV
                     LLPLVVLIIWMGVHPRTFVAVSEAPVTALLLDAKAPAPRTFVLKPATHEAPAVHGPAS
                     PEGAAAHDAPAAEPAAHEVHR"
BASE COUNT          498 a          837 c          953 g          372 t
ORIGIN      
        1 ttcgtccggg cccgctcgag gccggcctcc gcgtccttca actgggtctc ccagatggtc
       61 gggtcgatct gggcgatgag ctggcccttc ttcacgatgc tgttgtagtc gacgtagagc
      121 gccgagatca cgccggagac ctgggtgccg acggccacct gcaccacggg gctcaccgag
      181 ccggtggcat tgatccgctg ggtgataccg ccccgctcga ccttggccga acgccacttg
      241 atctcctccg ccggtttgcg gaacgcccac cagccgccgc cagccaccac cgcgacaccg
      301 attccaagac cgatccaggt atttcgcttc atggcgccgc gctccacgtg tcaaggggcc
      361 gggggagccc agccttcaac cttcgcataa cgatgtatgg accgccactc caggatcccg
      421 gttgaggcgc attttcccgg tgttcagcgg atcaggccga gcccttccgt cagggcgcgc
      481 ttggcgaacc catccgccag gaaggcctgg aggaatcccc cggcaagcac aatgaccgcc
      541 gagaccagca ccgtggcgcc cgccaggggg gcatgcacgg cgggccgatc ggaggccagg
      601 cgttcggctt cggcgctggg cgcctggagg aacagggcca ccaggaggcg caggtagtag
      661 taggcggaca ccaggctcgc caacacgccg aggatggcca tgcccacatg ccccgtgccg
      721 accagctcgc ggaagatcat gtacttgccg tagaagccgc ccaggggggg gatgcctgcg
      781 aggctcagca tgaagatggc ggcggagatg cccatggcgg gccgtttcca gcccaggccg
      841 cgcatgtcgt cgaaggtggt cttgtcgccc accatgccga aggccgtcag caggccgaag
      901 gcgcccaggt tcatggccag gtagatcacc aggtagaaga gcacgccgtt gaaggcggcg
      961 ggggtgcccg ccacgaagcc cagcatcagg tagcctgcgt ggctgatgct ggaataggcc
     1021 agcatgcgct tgacgttggt ctgcaccagg gcggtgaggt tgccggccac cagggtggcc
     1081 acggccagca cggccatgac cgcctgcatc ttcacgccca cggtgcccag gggggccagg
     1141 ctgccgggga agatgcggag gagggcgatg aaggcgacac ccttggtcgc cacggacatg
     1201 aagccggcga tggggtgggg cgaggcctca taggcgtccg gcgtccactg gtggaagggc
     1261 acggccgaca ccttgaagag aaagcccagc agcatcaacg cggcccccgc gagcaccagg
     1321 ggatccgcag ccaggccctg ggccttgagg gtgagcgcgg cggcggtgag gtccagcgtg
     1381 ccgctcagcc cgtagatcag cacgccgccc atcaggaagc agctggaggc cacggcgccg
     1441 gtgatgaaat acttcatgcc gccctcggcg ctttccgggc gcagccgcac ggtgcccacc
     1501 atggcgtaga gggggatgct gaagagctcg agggccagga acaggaccac gaaatgcgag
     1561 gtggaggcga agagcagcat gcccgtcacc gagaacagca ggagggacag ggtctcgccc
     1621 ttcacccagc cttcctggtg gaagtggtcc cagctctgga ggatggtcag ggccgaggcc
     1681 acgagcacga aaatgccggt gaactgggcg aggcgatcca tacgcagttg atagaagctg
     1741 ggctgagcgc cggtcaccca caggtccgtc agataccaga agctggcgcc cacggcgagg
     1801 agggccgtgc cgtacatcac ggcgcgaatc cacttcgcgg tggcctggtc cttgtcgagg
     1861 gacatcagcg gaatcaggca gccgccgaga gccggaagga ggagcggcag cagggccgcc
     1921 cactggctgg gagtgaggct catcggtgca cctcgtgggc ggcgggttcg gcggcgggag
     1981 cgtcatgtgc cgcagcgcct tcgggcgacg ccggcccgtg gacagcaggc gcctcgtggg
     2041 tcgccggctt caggacgaag gtccgcggcg cgggagcctt ggcgtccagc aggagcgccg
     2101 tcacgggcgc ttcgctgacg gccacgaagg tgcggggatg gacgcccatc cagatgatga
     2161 ggaccaccag cggcagcagc accgcgatct cgcgggcgtt caggtcgctg tggagatggt
     2221 gggtgccgct gtcctcatcc ttgttctcgg cgccccagaa gacgcgcttg aacatccaga
     2281 gcatgtagac cgcgcccagc agcacacccg aggtggccag gcaggcgtag aggcggcccc
     2341 agttgaaacc ggagaggaag gtgccgttca ggatccagaa ctcgcccacg aacccgttgg
     2401 tgaggggcag gccgatggag ctcagggtca cgatgaagaa gaaggtggtg aagatgggca
     2461 tcttcacggc cacgccgccg aagtcagcga tcatgcgggt gtgggcccgg tcgtagagca
     2521 tgcccaccag gaggaagagc gcgccggtgc tgatgccgtg gttgagcatc tggagcatgg
     2581 caccctgggt gccgatcacc gtgaaggagg ccaggccgag catcacgaag cccatgtggc
     2641 tcacggaaga ataggccacc
//
LOCUS       DATGWW010000201         1614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_63093, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000201 DATGWW010000000
VERSION     DATGWW010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63093"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1338)
                     /locus_tag="VK150_02985"
     CDS             complement(<1..1338)
                     /locus_tag="VK150_02985"
                     /EC_number="3.4.17.19"
                     /inference="COORDINATES: protein motif:HMM:NF014165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase M32"
                     /protein_id="HLP30299.1"
                     /translation="MAKAFDDLLEYSRDLYALRSAAGLLAWDQETYMPGKAGEGRARS
                     MAALSRVMHQRASDPRFADLLEASAADASLAPEEKALVRELKRDRDRTVRVPESLAAE
                     IASTVSLSQRAWAEARPKEDTKTFNPWLAKVIALKRKEAECLGHEGTPYNALLEGYEP
                     GARAEPLAAVLKDLKAALVPLLGRILEKAKGEKDPLAGLDFPLDRQRAFNARVLADMG
                     FDLEAGRLDESAHPFTEGLQPRDVRLTTRYSASDPMSALFSTLHEGGHGLYEQGFEER
                     WFGTPLAEAQGLGIHESQSRLWENQVGRSRDYWTRYYPLLKEHFPAQLASLDLDGFLR
                     AINRVEPSFIRVEADEVTYNLHIVLRFELELALFDGKLDAGDLEAAWNEGMRRNLGVT
                     PPSPSRGYMQDVHWSCGLLGYFPTYTLGNLRAAQLFAAARRDLPNLPGDVRQGR"
     gene            complement(1387..>1614)
                     /locus_tag="VK150_02990"
     CDS             complement(1387..>1614)
                     /locus_tag="VK150_02990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30300.1"
                     /translation="DLVVTDSHLGRDPAERKGHLLHARWRALHPVPPFIFLCGWGDAN
                     PPPETCCQVYGLAKPFPFPALLTLVRAVIGP"
BASE COUNT          250 a          507 c          618 g          239 t
ORIGIN      
        1 gcgtccctgg cgtacgtccc cggggagatt cgggaggtca cggcgcgcgg cggcgaagag
       61 ctgggcggcg cgcaggttgc ccagggtgta ggtggggaaa taccccagaa ggccgcagct
      121 ccaatggacg tcctgcatgt aaccccggga gggcgagggc ggggtgacac ccaggttacg
      181 ccgcatcccc tcgttccagg ccgcctccag gtcccccgcg tccagcttcc cgtcgaagag
      241 ggcgagctcc agctcgaagc gcagcacgat gtgcaggttg taggtcacct cgtcggcctc
      301 cacgcggatg aaggagggct ccacgcggtt gatggcgcgg aggaagccgt cgaggtccag
      361 ggaggcgagc tgggcgggga agtgctcctt gagaagcggg tagtagcggg tccagtagtc
      421 ccgggaccgc cccacctggt tctcccagag gcgcgactgg ctctcgtgga tgcccaggcc
      481 ctgggcttcc gccaggggcg tgccgaacca acgctcctcg aagccctgct cgtagaggcc
      541 atgcccgccc tcgtgcaggg tgctgaacag cgccgacatg ggatccgacg cgctgtagcg
      601 ggtggtgagg cgcacgtcgc gcggctggag gccctcggtg aagggatggg cgctctcgtc
      661 taggcggccc gcctcgaggt cgaagcccat gtcggcgagc acgcgcgcgt tgaaggcccg
      721 ctgcctatcc agggggaagt cgaggcccgc cagagggtcc ttctccccct tcgccttctc
      781 aaggatgcgg cccagcagag gcaccagggc ggccttcaga tccttgagca cggccgcgag
      841 gggctcggcg cgcgccccgg gctcgtagcc ctccaggagg gcgttgtagg gcgtgccctc
      901 gtggcccagg cattcggcct ccttgcgctt gagggcgatc accttggcga gccagggatt
      961 gaaggtcttg gtgtcttcct tcgggcgggc ctccgcccag gcgcgctggg acagggaaac
     1021 ggtggaggcg atttccgccg ccagggactc gggaaccctg accgtgcggt cgcggtcgcg
     1081 cttcagctcg cggaccaggg ccttctcctc gggcgcgagg gaggcgtcgg cggccgaggc
     1141 ctctaggagg tcggcgaaac gcgggtccga agcgcgttga tgcatcaccc gcgagagggc
     1201 cgccatggag cgggcgcgtc cctcgccggc cttgccgggc atgtaggttt cctggtccca
     1261 tgcgagcaat cccgcggcgg agcgcagggc gtaaaggtcg cggctgtatt ccaggaggtc
     1321 gtcgaaagcc ttggccatgg ggtctccggt gggtgaggat gcgaggaaga taacattccg
     1381 ggccgctcaa ggcccgatca cggcgcgcac caaggtgagc agggccggga aggggaaggg
     1441 cttggccagg ccgtagacct ggcagcaggt ctccggaggc ggattcgcat cgccccagcc
     1501 gcaaaggaag atgaagggcg gcacgggatg gagggcgcgc cagcgcgcat ggaggaggtg
     1561 gcccttgcgc tcggcgggat cgcggcccag gtgggaatcg gtcaccacca ggtc
//
LOCUS       DATGWW010000202         2712 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_371041, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000202 DATGWW010000000
VERSION     DATGWW010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371041"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1429)
                     /locus_tag="VK150_02995"
     CDS             complement(<1..1429)
                     /locus_tag="VK150_02995"
                     /inference="COORDINATES: protein motif:HMM:NF013665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HLP30301.1"
                     /translation="MFDIEASLDSRLLAVPRNRPTVVFPEALDARTLEAACFLGRFIR
                     PVFLAPEAEVRALAARELAHLGADRVAYTLSESAFVDPASRPDLIESFAAACLEWCQI
                     HERPMCIEEARSLVSEPGRFGIWAVKLGHADMVVGGAIHEPKAFFRPMVDLLAQRSVA
                     CEAGVFVLPDEHPEEVYPHNIVVFGDVGVNASMTPRTLAEVAVGTCAVARDLIPEDVL
                     PEIRCAMVSYSNRGSDEGPSPELVRQAADLVPEILAERVKHAQRYASIQIRGEVKVSV
                     ALSKRSASLYKAEGQPWEGVPNVIVCPNLDMGNLLYHLYATRFPGARKFPVMFGLWFQ
                     GVDLPMDCTPEDIRLAVKASVMRLHHYGQWQRTPKDTFFRRHRVLVLNPGSTSTKTSI
                     FEGDEERFTEEIQHPAEALKAFEGKPITEQFAFRKEAVLRFLAEKGLALGDLDAVAGR
                     GGLLRPIPHGTWNVADAMLDDLKAGR"
     gene            complement(1515..2138)
                     /locus_tag="VK150_03000"
     CDS             complement(1515..2138)
                     /locus_tag="VK150_03000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30302.1"
                     /translation="MDGWLDRLREHWRGLAVALLVGALILATWQGRALTQPAGVLAPE
                     DPVQTDPDVLGSWTHRGHRVTPLAGFQLRARVLGAERYRHDRPAELSPLDLALGWGPM
                     SDSRVLEAITVRQQDRWYFWSAKRLPIPEGDIVRHSANMHMIPANGAVAKQLLAARPG
                     QLVTLRGQLVRVDGADGFHWVSSLSRADTGDGSCEVVWVESASLADH"
     gene            complement(2163..>2712)
                     /locus_tag="VK150_03005"
     CDS             complement(2163..>2712)
                     /locus_tag="VK150_03005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30303.1"
                     /translation="RASLVKGWAPGTGNLLLFQARSSARHEADGWQECLVNASLTAYH
                     QGFPYQTQAAYLQVDATHRPDPDKVLYLGGMDGLRGYGNHLLLGDRRWMASVEERILT
                     SYDWLGILQLGFVVYADAGAIRRADTGAWSRTYMDVGGGLRLGNLKSSIGRVFLMTIA
                     YPLVREPGMDHHQFVVGNLVKF"
BASE COUNT          424 a          938 c          948 g          402 t
ORIGIN      
        1 ggcgcccggc cttcaggtcg tccagcatcg cgtcggccac gttccaggtg ccgtggggga
       61 tgggccgcag caagccgccc cgccccgcca cggcgtccag gtcgcccagg gcgaggccct
      121 tttctgccag gaaccgcagc accgcctctt tgcggaaggc gaactgctcg gtgatgggct
      181 tcccctcgaa ggccttgagc gcctcggcag ggtgctggat ctcctcggtg aaccgctcct
      241 cgtcgccctc gaagatggag gtcttcgtcg aggtcgagcc ggggttcagc accagcaccc
      301 ggtgcctccg gaagaaggtg tccttcggcg tgcgctgcca ctgcccatag tggtgcaggc
      361 gcatcaccga ggccttcacc gccaggcgga tgtcctccgg ggtgcagtcc atgggcaggt
      421 ccacgccctg gaaccagagg ccgaacatca cggggaactt gcgcgccccg gggaagcggg
      481 tggcgtagag gtggtagagc aggttgccca tgtcgaggtt ggggcagacg atcacgttcg
      541 gcacgccctc ccagggctga ccctcggcct tgtagaggct cgccgagcgc ttggacaggg
      601 ccacgctcac cttcacctcg ccgcggatct ggatgctggc gtagcgctgc gcgtgcttga
      661 cgcgctcggc caggatctcc ggcaccaggt cggcggcctg gcgcaccagc tcgggcgagg
      721 gtccttcgtc gctgccgcgg ttcgaatagg acaccatggc gcagcggatt tcgggcagga
      781 cgtcctcggg gatgaggtcc cgggccacgg cgcaggtgcc cacggccacc tcggccaggg
      841 tgcggggcgt catgctggcg ttcacgccca catcgccgaa caccacgatg ttgtgggggt
      901 acacctcctc gggatgctcg tcgggcagca cgaagacgcc ggcctcgcag gcgacgctgc
      961 gctgggcgag caggtccacc atggggcgga agaaggcttt cggctcatgg atcgcgccac
     1021 ccaccaccat gtcggcgtgg cccagcttca cggcccagat gccgaaccgg cccggctcgg
     1081 acaccagcga ccgggcctcc tcgatgcaca tggggcgctc atggatctgg caccactcca
     1141 ggcaggcggc cgcgaaggat tcgatcaggt cgggccgcga agcgggatcc acgaaggcgc
     1201 tctcggacag ggtgtaggcc acccggtccg cgccgagatg tgccagctcg cgggccgcga
     1261 gggcgcggac ctcggcttcg ggggccagga acacggggcg gatgaagcgg cccaggaagc
     1321 aggcggcttc gagggtccgg gcatccaggg cttccgggaa gaccaccgtg gggcggttcc
     1381 ggggcacggc cagcaggcgg ctgtcgaggg aggcttcgat gtcaaacatg ggactccaag
     1441 gccaccaggg gcctctgcgc cgagtctatc agggtgatct gccgtcgttt tccacctgca
     1501 ggtcacatgt gatctcagtg gtctgcgagg ctcgccgatt ccacccacac cacctcgcag
     1561 gaaccatccc cggtatccgc ccgggacagg ctgctgaccc agtggaaacc gtcggcgccg
     1621 tccacgcgga cgagctgccc gcggagcgtc acaagctgcc cgggccgggc cgccagcagc
     1681 tgtttcgcca ccgccccgtt cgccggaatc atgtgcatgt tggcgctgtg ccggacgatg
     1741 tcgccttcgg gaatgggcag acgcttcgcg ctccagaagt accagcggtc ctgctgccgg
     1801 accgtgatgg cttccaggac ccgcgaatcg gacatgggcc cccagcccag ggccaggtcc
     1861 agcggagaga gctccgcggg ccgatcatgg cggtagcgtt ccgcgcccag cactcgggcc
     1921 cggagctgga agcccgccaa cggcgtgacg cggtggccgc ggtgggtcca gctgcccaag
     1981 acatccggat cggtctggac gggatcctcc ggcgccagca cccccgcggg ctgggtcagg
     2041 gcgcggccct gccaggtggc gaggatcagc gcgccgacca gcagcgccac cgcgaggccg
     2101 cgccagtgct ctctcagtcg atcaagccat ccgtccatgg gacaaggcta ccctgccctc
     2161 attcagaact tcacgaggtt gcccacgacg aactggtggt ggtccatgcc cggctcccgc
     2221 accagcggat aggcgatggt catgaggaac acccgaccga tggagctctt caggttgccc
     2281 aggcgcaacc cgccgcccac atccatgtac gttcggctcc aggcgcccgt gtcggcccgg
     2341 cggatggccc cggcatccgc gtagaccacg aagcccagct gcaggatgcc cagccagtcg
     2401 taggacgtga ggatgcgctc ctccacggag gccatccagc ggcgatcccc cagcagcagg
     2461 tggttcccgt agccccgcag gccgtccatg cccccgaggt agagcacctt gtcggggtcg
     2521 ggacgatgcg tcgcgtccac ctgcaggtag gccgcctggg tctgatacgg gaagccctgg
     2581 tggtaggccg tgaggctggc gttcaccagg cactcctgcc agccgtcggc ctcgtggcgc
     2641 gccgaggacc tggcctggaa caggaggagg ttgcccgtgc ccggcgccca gcccttgacg
     2701 aggctggccc gg
//
LOCUS       DATGWW010000203         3037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_63274, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000203 DATGWW010000000
VERSION     DATGWW010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3037
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63274"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..829)
                     /locus_tag="VK150_03010"
     CDS             complement(<1..829)
                     /locus_tag="VK150_03010"
                     /inference="COORDINATES: protein motif:HMM:NF024872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HLP30304.1"
                     /translation="MAKASPLFECTACGVRHPKAMGKCTGCGAWDTVQEVRGSLKRDL
                     QRAGSAYAQSHYTGPVALADVEVTDAQRSPTGIQELDRVLGGGVVPGMVVLLGGEPGI
                     GKSTLLLQWAATAQGSVLYASGEESERQIKLRAQRLGAEYPGIHLLAETDVRRILEEA
                     ERMKPGLLLVDSIQTLFDPDFESSAGSVSQVRGCAALLTRWAKTTGTPLVLVGHVTKD
                     GSLAGPKVLEHLVDTVLAFEGDRHHHHRLLRALKNRFGAAFELGVFAMTEKGLVAAEG
                     "
     gene            complement(829..1227)
                     /locus_tag="VK150_03015"
     CDS             complement(829..1227)
                     /locus_tag="VK150_03015"
                     /inference="COORDINATES: protein motif:HMM:TIGR00640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HLP30305.1"
                     /translation="MSPAPIRVVIAKPGLDGHDRGAKVVARALRDAGMEVIYTGLRQT
                     PQQIVAAVVQEDARVLGMSILSGAHNQIFPEVLRLLKAQGADDVLVFAGGIIPDEDIP
                     ALKALGIREVFQPGTNTDDIVAFIQRETRD"
     gene            complement(1246..1701)
                     /locus_tag="VK150_03020"
     CDS             complement(1246..1701)
                     /locus_tag="VK150_03020"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HLP30306.1"
                     /translation="MFHIILHQPEIPQNTGSIGRLCVNNGVKLHLIHPLGFETTDYYL
                     RRAGLDYWEKLDPTHYESWRDFMARNPAKRLWFFSTKGAKRHTQVPWAFGDGLVFGRE
                     TVGLPEDILAAHPANLVRIPMLGDHHRSLNLAQAAAIGLYEALRQTEGW"
     gene            1713..2060
                     /locus_tag="VK150_03025"
     CDS             1713..2060
                     /locus_tag="VK150_03025"
                     /inference="COORDINATES: protein motif:HMM:NF023395.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HLP30307.1"
                     /translation="MDGCLFCQIAKKEIPAAVVYEDDTLIAFKDIFPQAPVHLLLIPK
                     AHCSGLADLTPETAAAAARIPQVAARLAAEHGVEASGWRLLSNNGADAGQTVFHLHFH
                     LLGGKPLGGKLCL"
     gene            complement(2063..2473)
                     /locus_tag="VK150_03030"
     CDS             complement(2063..2473)
                     /locus_tag="VK150_03030"
                     /inference="COORDINATES: protein motif:HMM:NF033749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HLP30308.1"
                     /translation="MAYMQWRSTLEVGHAQIDSEHQSLVEVLNRLHAAMKQGKGKDEI
                     EKVLVFLKDYTVGHFKAEEALMMSHRYPGAQMHMAIHADLVKQVAQLITDFQAGKTVL
                     TGAVLDFLEAWLVKHIMSEDKLLGEFLRAKGSVA"
     gene            2744..>3037
                     /locus_tag="VK150_03035"
     CDS             2744..>3037
                     /locus_tag="VK150_03035"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HLP30309.1"
                     /translation="MPAAQVDLQLMAQRLKALGHPSRLAILRLVVQGQVQGTPAGEIQ
                     ARLGMPASTLSHHLSDLAEAGLLKATRERTTIRYAARFDQLKALTDYLWQDCCG"
BASE COUNT          462 a         1017 c         1011 g          547 t
ORIGIN      
        1 tgccctcggc ggcgaccagg cccttctcgg tcatggcgaa gacgcccagt tcgaaggcgg
       61 cgccgaagcg gttcttgagg gcccgcagca ggcggtggtg gtggtggcgg tcaccttcga
      121 aggcgagcac cgtgtccacc aggtgctcaa gcaccttggg gcccgcgagg ctgccgtcct
      181 tggtaacgtg gccgaccagc accaggggcg tgcccgtggt cttggcccag cgggtgagca
      241 gcgcggcgca gccgcgcacc tggctcacgc tgccggcgct gctctcgaaa tcgggatcga
      301 agagggtctg gatgctgtcc accagcagca ggcccggctt catgcgctcg gcctcctcga
      361 ggatgcggcg cacgtcggtc tcggccagca ggtggatgcc ggggtactcc gcccccagcc
      421 gctgggcgcg gagcttgatc tggcgctcgc tctcctcgcc gctggcgtag agcaccgagc
      481 cctgggccgt ggccgcccac tgcaacagca gcgtggattt gccgatgccg ggctcaccac
      541 ccagcagcac caccatgccc ggcaccacgc cgccgcccag cacccggtcc agctcctgga
      601 tgccggtggg ggaccgctgg gcatccgtga cttccacgtc cgccagggcc acggggccgg
      661 tgtagtgact ctgggcgtag gccgagcccg cccgctgcag gtcgcgcttc agtgaaccac
      721 ggacctcttg cacggtgtcc caggcgccgc agccggtgca tttgcccatg gccttcgggt
      781 ggcggacccc gcaggccgtg cattcgaaca ggggggaagc cttggccatc agtcgcgggt
      841 ctcgcgctgg atgaaggcca cgatgtcatc ggtgttggtg ccgggctgga agacctcgcg
      901 gatgccgagg gccttgagcg cggggatgtc ctcgtcgggg atgatgccgc cagcgaagac
      961 cagcacatcg tcggcgccct gcgccttcag cagccgcagc acctcgggga agatctggtt
     1021 gtgggcgccg ctgaggatgc tcatgcccag cacccgggcg tcctcctgca ccaccgccgc
     1081 gacgatctgc tggggcgtct ggcggaggcc cgtgtagatc acctccatgc cggcatcccg
     1141 cagggcccgg gccacgacct tggcgccgcg gtcatgcccg tcgaggcccg gcttggcgat
     1201 gacgacgcgg atgggcgctg ggctcatggg gggactccgg agggattacc agccctcagt
     1261 ctgcctcagc gcctcgtaaa ggccaatggc ggcggcctgg gccaggttca ggctgcggtg
     1321 gtggtcgccc agcatgggga tgcgcacgag gttggcggga tgggcggcca ggatgtcctc
     1381 gggcaggccg acggtctcgc ggccgaagac caggccgtcc ccgaaggccc agggcacctg
     1441 ggtgtgccgc ttggccccct tggtgctgaa gaaccacagc cgcttggcgg ggttccgcgc
     1501 catgaagtcc cgccagctct cgtagtgggt ggggtcgagc ttctcccagt agtcgaggcc
     1561 cgcccggcgc aggtagtagt ccgtggtctc gaagcccagg ggatggatga ggtgcagctt
     1621 cacgccgttg ttcacgcaga ggcggccgat gcttccggta ttctgcggaa tctcgggctg
     1681 gtgcaagatg atgtggaaca tgggaggtcc cagtggatgg ttgcctgttc tgccagatcg
     1741 cgaagaagga gatccccgcc gccgtggtgt atgaagacga tactctgatc gccttcaagg
     1801 acatcttccc gcaagcaccg gtccacctgc tgctcattcc gaaggcacac tgctccggcc
     1861 tcgcggacct cacccccgag acggccgccg ccgcggcgcg gatcccccag gtggcggccc
     1921 ggctcgccgc ggaacacggg gtggaggcca gcggctggcg cctgctcagc aacaacggcg
     1981 ccgatgcggg ccagactgtg ttccacctgc atttccacct gctggggggc aagcccctgg
     2041 gcggaaagct ctgcctctag gactaagcca cggacccctt ggcccgcagg aactcgccga
     2101 ggagcttgtc ctcgctcatg atgtgcttca ccagccacgc ctcgaggaag tcgaggacgg
     2161 cccccgtgag caccgtcttg ccggcctgga agtccgtgat cagctgggcc acctgcttca
     2221 ccagatcggc gtggatggcc atgtgcatct gggccccggg gtagcggtgg ctcatcatca
     2281 gggcctcctc ggccttgaag tgccccacgg tgtagtcctt gaggaacacg agcaccttct
     2341 cgatctcatc cttgcccttg ccctgcttca tggccgcgtg gaggcggttc agcacctcca
     2401 ccagcgactg gtgctcgctg tcgatctgcg cgtgtccaac ttccagggtg ctgcgccatt
     2461 gcatgtaggc catcgattcg ctcctgtgat tccggccaac cgtgagggtg gttctctgtc
     2521 tcagccgtag gatgaaggag ctcggttttt ttggcgaccc gagtgtgatt aatgtcatta
     2581 gatctattga aattagcagt ttgtattctt tttcatgctt gacttcacgc ccctgttgga
     2641 gaaataccag gtcggttact cctaatccca gccgggtggc gccgcgttca atcgtgcccc
     2701 aggtcccttg attcttaatt tctagaaatt tagaatatga accatgcctg ctgcccaggt
     2761 cgacctgcaa ctcatggccc agcgcctcaa ggcgctcggc catccctcgc ggctcgcaat
     2821 cctgcgcctg gtggtgcagg gccaggttca gggtaccccg gcgggcgaga tccaggcccg
     2881 cctggggatg ccggcctcga ccctcagcca ccacctgtct gacctggcgg aggccgggct
     2941 cctgaaggcc acccgcgagc gcaccaccat ccgctacgcc gcccgcttcg accagctcaa
     3001 ggccctcacc gattacctct ggcaggactg ctgcggc
//
LOCUS       DATGWW010000204         2010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_329185, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000204 DATGWW010000000
VERSION     DATGWW010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329185"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /gene="hisI"
                     /locus_tag="VK150_03040"
     CDS             complement(<1..456)
                     /gene="hisI"
                     /locus_tag="VK150_03040"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: protein motif:HMM:NF000768.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HLP30310.1"
                     /translation="MDLDTLRFDADGLIPGLVQSRTGELRMVAWLNRDALRRTLDTGF
                     VTFWSRSRQSLWVKGETSGNRLRLLQIRPDCDRDALLILVDPEGPSCHRGTESCFDAG
                     PGDAPGAPWPATLPWLGRLEALLQARKAAADPAGSYTQKLFAQGVDRIAK"
     gene            complement(458..1210)
                     /gene="hisF"
                     /locus_tag="VK150_03045"
     CDS             complement(458..1210)
                     /gene="hisF"
                     /locus_tag="VK150_03045"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HLP30311.1"
                     /translation="MPAKRIIPCLDVKNGRVVKGVQFKDLRDLGNPADLARRYDAEGA
                     DELVFLDISASIENRGTREAWVREVARELSIPFTVGGGVSSVADARSLLRSGADKVAV
                     NTAAALRPALVSELADAFGRQCVVAAVDVKRDPALGWRVYLKGGTQPTERPALDWLWE
                     LNELGAGEILLTSMDRDGTGEGFDLPLLEKAAELPIPLIASGGAGREIHFLEALEHGA
                     DAVLAATLFHEGILPIPRLKAYLAQNDLSVRI"
     gene            complement(1210..1923)
                     /locus_tag="VK150_03050"
     CDS             complement(1210..1923)
                     /locus_tag="VK150_03050"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HLP30312.1"
                     /translation="MQLIPSLDLLQGRLVRLRHGDPAQATFYDMTPEDWVGQLAEAGA
                     RRIHLVDLNGAFGNPRQGLFTALPSRYPEIRFQLGGGLRDRAAIEETLDLGFEAVVGT
                     LAVERPSALKGLPGHRLIMALDLQGDRIVTRGWQAPSACASTDVFEALLTLGFDRALV
                     TDVSRDGTLEGPGHEAAAWVAKEGFHVQASGGVKALSDLPPLSTIPGVVGAISGKALM
                     EGFIPLDDPRTRAALAGEA"
BASE COUNT          279 a          674 c          779 g          278 t
ORIGIN      
        1 cttggcgatg cggtccacgc cctgggcgaa gagcttctgg gtgtagctgc ccgccggatc
       61 ggcggcggcc ttccgcgcct ggagcagggc ctccagccgg cccagccagg ggagggtggc
      121 gggccaaggg gcgccgggag cgtcgcccgg accggcgtcg aagcagctct ccgtcccgcg
      181 gtggcagctg gggccttccg ggtcgacgag gatgagcagg gcgtcgcgat cgcagtcggg
      241 acggatctgg aggaggcgca ggcggtttcc gctggtctcg cccttcaccc agagggattg
      301 ccgagagcgg ctccagaagg tgacgaagcc cgtgtcgagg gtgcgacgga gggcgtcgcg
      361 gttgagccag gccaccatgc ggagttcgcc ggtgcggctt tgcaccaggc cgggaatgag
      421 cccgtcggcg tcgaagcgga gggtgtcgag gtccatgtca gatccgtacg gagaggtcgt
      481 tctgggccag gtaggccttc agtcggggaa tgggaaggat gccctcgtgg aagagcgtgg
      541 cggcgaggac cgcgtcggcg ccgtgctcca gcgcctccag gaagtggatc tcgcggcccg
      601 cgccgcccga ggcgatgagc gggatcggaa gctccgcggc cttctcgagc agcggcaggt
      661 cgaaaccctc gccggtgccg tcgcgatcca tggacgtgag gaggatctcg ccggcgccca
      721 gctcgttcag ctcccagagc cagtccaggg ccgggcgttc ggtgggctgc gtgccgccct
      781 tcagatacac gcgccagccc agggcgggat cgcgcttcac gtccacggcg gccaccacgc
      841 actggcggcc gaaggcgtcg gccagctcgg agaccagcgc gggccgcagc gccgcggcgg
      901 tgttcacggc caccttgtcc gcgccggagc ggagcaggct gcgggcatcg gccacgctgg
      961 acacgccccc gcccaccgtg aagggaatgc tcagttcgcg ggccacctcg cgcacccagg
     1021 cctcccgggt gccgcggttc tcgatcgagg ccgagatgtc gaggaacacc agctcgtccg
     1081 cgccttccgc gtcgtagcgg cgggccaggt ccgcggggtt gccgaggtcg cgcaggtcct
     1141 tgaactgcac gcccttcacg acgcggccgt tcttcacgtc gaggcagggg atgatgcgct
     1201 tggcgggcat caggcctccc cggccagcgc ggcccgggtc cgggggtcgt ccagggggat
     1261 gaacccttcc atgagcgcct tgccgctgat ggcgcccacc acgccgggga tggtggagag
     1321 cggcggcaga tccgacagcg ccttgacgcc gccggaggcc tgcacgtgga agccctcctt
     1381 cgcgacccac gcggcggcct catggcccgg cccttccagg gtgccgtcgc ggctcacgtc
     1441 cgtcaccagg gcccggtcga agccgagggt gagcagggcc tcgaagacat cggtcgaggc
     1501 gcaggcgctg ggggcctgcc agccccgggt gacgatgcgg tcgccctgga ggtcgagggc
     1561 catgatgagg cggtgccccg gcagcccctt gagggcggag gggcgctcca cggcgagggt
     1621 gccgaccacc gcttcgaagc ccagatccag ggtttcctcg atggcggcgc ggtcgcgcag
     1681 gccgccgccc agctggaaac ggatctcggg gtaccgcgac ggcaaggcgg tgaacaggcc
     1741 ctgcctgggg tttccgaagg cgccgttcag gtccaccagg tggatgcgcc tggcgccggc
     1801 ctccgccagc tgtccgaccc agtcctcggg ggtcatgtcg tagaaggtgg cctgcgccgg
     1861 gtcgccgtgc cggaggcgca ccaggcgtcc ctgcaggagg tcgaggctcg ggatcagttg
     1921 catggcacct ccggctgcgg cgcggtggcg cccatccagg agagggcgga ctggagcagg
     1981 agtaggcccg cccggccgga tttctcgggg
//
LOCUS       DATGWW010000205         2254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_144502, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000205 DATGWW010000000
VERSION     DATGWW010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144502"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..604
                     /locus_tag="VK150_03055"
     CDS             <1..604
                     /locus_tag="VK150_03055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30313.1"
                     /translation="YGAHGALAAPGSYKATLAFQVDGVLKPVSEPVSFEVKPLDADRL
                     TPAQWTEFSAFCARMGEAQRRAMGASERLTETQARLDAVRKALLETASADAMNLEKAR
                     GLHTELKALRDLLSGDAVVGRYQEPTAPGILGRISDVTGSVWNTTQLPTASQRQNLAW
                     AEEGLQGVNGRLEAALTTLTALETALEAAKAPHTPGRAIR"
     gene            679..1416
                     /gene="lptB"
                     /locus_tag="VK150_03060"
     CDS             679..1416
                     /gene="lptB"
                     /locus_tag="VK150_03060"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR04406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HLP30314.1"
                     /translation="MTEQTPCLEAVNLQKRYGDRTVVRDVSLCVGTGEVVGLLGPNGA
                     GKTTTFYMVVGVEAPDRGGIRWLGQDVTPQPMHRRARLGIGYLAQESSVFRGLTVWEN
                     LMALAELQPISKEAQKDRCEQLLADFHLGKVRDTLGMSLSGGERRRCELARALVTEPR
                     IMLLDEPFAGVDPKSVLEIQGLIADLKARGIGVLITDHNVRETLQIADRAYILADGMI
                     MKHGLPSEIAEDPDIRRVYLGDRFRLD"
     gene            1686..>2254
                     /locus_tag="VK150_03065"
     CDS             1686..>2254
                     /locus_tag="VK150_03065"
                     /inference="COORDINATES: protein motif:HMM:NF012530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30315.1"
                     /translation="MAAGPFLSQRLAQSQTLALTPAMQLKLKLWQMNLQELSETIERE
                     LEDNPLLELAEDADEVPTLEAIEEGRDSDVTEGSSDQASDGVELPEGVDTVDLGPMLD
                     AAGEMNPDGDLEKFTEEGVAQVQETELGAENSWDQDLPRTSNLPEEDRLSWEDRLSAF
                     ESLQDHLVGQLYETLEHEDPRAALVERLI"
BASE COUNT          398 a          761 c          780 g          315 t
ORIGIN      
        1 ctacggtgcc cacggcgccc tggccgcgcc cggaagctac aaggccacgc tggccttcca
       61 ggtggacggg gtgctcaagc ccgtgtcgga gcccgtctcc ttcgaggtca agcccctcga
      121 tgccgaccgc ctgacgccgg cccagtggac ggagttcagc gccttctgcg cccgcatggg
      181 cgaggcccag cgccgggcca tgggcgcctc ggagcgcctg accgaaaccc aggcccgcct
      241 ggatgcggtg cgcaaggcgc tcctcgaaac cgcctccgcg gatgcgatga acctggagaa
      301 ggcccgaggg ctgcacacgg agctcaaggc cctgcgggac ctcctgagcg gcgacgctgt
      361 ggtgggccgg taccaggagc cgacggcgcc tggcatcctc gggcgcatct cagatgtcac
      421 gggcagcgtc tggaatacca cgcagctgcc gaccgcctcc cagcgccaga acctcgcctg
      481 ggccgaggaa ggcctccagg gcgtgaacgg acgcctcgaa gcggccctca ccaccctgac
      541 cgcgctggaa acggccctgg aggccgccaa ggccccgcat accccaggcc gggccatccg
      601 ctgacgcgcg caaccgatcc tccgggcggc ttcggccgcc cggaggcaaa ggtcgccgtc
      661 gtgtgttctg atagaaccat gaccgagcag accccctgcc tagaggccgt gaacctccag
      721 aagcgctacg gcgaccgcac cgtggtgcgg gacgtcagcc tttgcgtggg caccggcgag
      781 gtggtggggc tcctgggacc caacggggcg gggaagacca cgaccttcta catggtggtg
      841 ggcgtggagg ccccggaccg cggcggcatc cgctggctgg gccaggacgt gacgccgcag
      901 cccatgcacc ggcgggcgcg actgggcatc ggctacctgg cccaggaatc cagcgtgttc
      961 cggggcctca ccgtctggga gaacctcatg gccctggcgg agttgcagcc catctccaag
     1021 gaggcccaga aggaccgctg cgagcagctg ctggccgact tccacctggg caaggtgcgc
     1081 gacaccctgg gcatgagcct gtcgggcggc gagcggcgcc gctgcgagct ggcccgggcc
     1141 ctggtcacgg aaccgcgcat catgctcctg gacgaaccct tcgccggcgt ggacccgaaa
     1201 tccgtgctgg agatccaggg gctcatcgcc gacctcaagg cgcgaggcat cggcgtcctt
     1261 atcacagatc acaatgtccg cgagaccttg cagatcgctg accgggccta tatcttggcg
     1321 gacgggatga tcatgaagca cggcctgccc agcgagatcg cagaggatcc ggacattcgc
     1381 cgggtgtacc tgggcgatcg gttcaggttg gattagggtc tgatttcgaa atggggtgtg
     1441 gccgcgcaag gggcgccgcc aagcgagaca aggaaagcga cgatggcaat agcggcacta
     1501 tggacgagga gcttgacgca ggatcgcgcc aggcgccgcc ccttgccctt cgggacgggt
     1561 ccagccgcgc gcccagctgt gtcaccacgc ttgaacgatg tcccgcatcg ccctgcgcgc
     1621 gcttccttgc tgggtcacgc ggctggaccc gtcgcgggtc gcatccattt tgaaatcaga
     1681 ccctaatggc agccggcccg ttcctctccc agcgcctggc ccagagccag accctcgccc
     1741 tcacgccggc catgcagctg aagctgaagc tctggcagat gaacctgcag gagctgtcgg
     1801 agaccatcga gcgtgagctg gaggacaatc ccctgctgga gctggccgag gacgccgacg
     1861 aagtgccgac cctcgaggcc attgaggagg gccgggactc cgacgtgacg gagggcagct
     1921 cggatcaggc ctcggacggc gtcgagttgc ccgaaggggt ggacacggtg gacctgggac
     1981 cgatgctgga tgcggcgggt gagatgaatc ccgacggcga tctggaaaaa ttcacggaag
     2041 aaggcgtggc ccaggtgcag gagaccgagc tgggcgccga gaacagctgg gatcaggacc
     2101 tgccacggac cagcaacctg ccggaggagg accgcctctc ctgggaggac cgcctcagcg
     2161 ccttcgaatc cctgcaggat cacctggtgg gccagctcta cgaaaccctg gagcacgagg
     2221 atccccgggc cgccctggtg gaacgcctca tcga
//
LOCUS       DATGWW010000206         4959 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_105184, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000206 DATGWW010000000
VERSION     DATGWW010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4959
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105184"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(165..983)
                     /locus_tag="VK150_03070"
     CDS             complement(165..983)
                     /locus_tag="VK150_03070"
                     /inference="COORDINATES: protein motif:HMM:NF023385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3473 domain-containing protein"
                     /protein_id="HLP30316.1"
                     /translation="MNPPRLPLSLDWEDWFQLCCPPYDQPEALDRYECRLPLATDRAL
                     GLCAELGARATWFCLGDQARRHPQLLRRIVAEGHAIALHGLTHRRAFEMDRATWLASL
                     RDGKALLEDLSGAPVVGYRAPEWSLRGPAEGWWADLPDLGFRYDSSRVPLSVIGNPAW
                     PRRPHKLGENLWELPPPVLWSGPPRSPLWGWGLRVLPFSVIRRALETLALEDAGTPLV
                     LHPWELDEGQPDLPGASFGHRFAHSAGLRGHHGHLRDLFAGFRLTTLETWLGGR"
     gene            complement(980..1675)
                     /locus_tag="VK150_03075"
     CDS             complement(980..1675)
                     /locus_tag="VK150_03075"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HLP30317.1"
                     /translation="MAILAAPTGSEVNLLEVMLHAGPVSKTVLVILAAFSLLSWVVII
                     RKALLYRRSRDVSEQFRSAFKRATDWREFKQQVEKFALSPLVGLFVAGYGEVTYQLRQ
                     VGQDGRPQLRSMEAVERSLQRASVVEMGRLERSLGGLATVAAVSPFIGLFGTVWGIID
                     AFRGIGATGNANLATVAPGISEALVATAIGLVAAIPALMAYNFFQGQLKQFQTELDDF
                     SLEFISLSERNFT"
     gene            1744..3099
                     /locus_tag="VK150_03080"
     CDS             1744..3099
                     /locus_tag="VK150_03080"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HLP30318.1"
                     /translation="MHVLVIGSGYVGLVAAACFAEAGHHILGVDVDAEKVATLSRGES
                     PIFEPGLDELLAKHLASGTLRFTTDLKAGIAQADAAFICVGTPQSEDGSADMKYVLAV
                     AGQIGDAMALRAKDAKPLIVVDKSTVPVGTAARVHAEIAAHTDRAFEVVSNPEFLREG
                     SAIGDFLEPDRVVVGCRSDHAETVMKGLYQSFLDRSGGKWFRMDPPSAELTKYAANAM
                     LALRISFINEIANLAEAVGADVDHVKVAIGADHRIGPAFLNPGPGFGGSCFPKDLQAL
                     LKVGREQGHPMMTLSATVEANRNQKQVLLRKVKAHFGVKAGVPAPLKGRRFALWGLAF
                     KANTDDIRESMALELIEGLVNLGAEVVAHDFAAMDAVRAKIGDKVRYAGSPLEACDGA
                     DALLIATEWSEYREADLEAVAKALKARRIFDGRNLFRPEAMEAKGWTYHSLGRRAVEA
                     K"
     gene            3096..3440
                     /locus_tag="VK150_03085"
     CDS             3096..3440
                     /locus_tag="VK150_03085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30319.1"
                     /translation="MRIHLEDIAHARSGDKGDGSNVGVIAYTEAGFQLLRKELTTERV
                     KDHFSTICKGSVERFEVPNLKALNFILHDSLGGGGSESVKTDAQGKTHGQALLRMELD
                     LPASQSLADLKP"
     gene            3471..3656
                     /gene="tatA"
                     /locus_tag="VK150_03090"
     CDS             3471..3656
                     /gene="tatA"
                     /locus_tag="VK150_03090"
                     /inference="COORDINATES: protein motif:HMM:NF011430.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HLP30320.1"
                     /translation="MGNLGMMEILLIGIALLIFFGPSRLPELGKSLGKGIQEFKKASR
                     ELTDSVKEDVAVDKDKK"
     gene            3736..4506
                     /gene="tatC"
                     /locus_tag="VK150_03095"
     CDS             3736..4506
                     /gene="tatC"
                     /locus_tag="VK150_03095"
                     /inference="COORDINATES: protein motif:HMM:TIGR00945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HLP30321.1"
                     /translation="MAIPATPPEKMSFWEHLQELRVRIVRSLLIVAVGFAVTYAFRFK
                     LWTWAQKPFLEAMARQTGKPIGTLDPFAFTDLTEPFFSMMRLSLWSAAVLCAPFLFYQ
                     LWAFIRPGLLPKERRLVIPFVFVTSGCFLAGAAFAYTQAFKFLGDILFQEAASAGLRA
                     NLHASDYLDLFISTTLITGVMFELPVLFFFLAKFRIVTSRLMLKYWRHATLAILIFSA
                     FFTPGDVVVTTIFFSVVLLGLYAISVGVAWLAEPRQPR"
     gene            complement(4494..>4959)
                     /locus_tag="VK150_03100"
     CDS             complement(4494..>4959)
                     /locus_tag="VK150_03100"
                     /inference="COORDINATES: protein motif:HMM:NF016027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLP30322.1"
                     /translation="LFEIAPALLDAQPEWDLLHQVGPAELARLQDRPRHARHALVPFI
                     AEVDRAMEAASLVIGRSGASTCAELKAAGRAAVLVPLPTSAGDHQRKNALAMAAEGRA
                     LVLEQGPDFSGRIQAALLPLMGGAAARQSLSKAPEPNLAVASCLDDLATYLG"
BASE COUNT          809 a         1742 c         1644 g          764 t
ORIGIN      
        1 cttcacgtcg aaggccttcc gcaggctttc aggtgcgccg gtctccgcca ggtgcatgag
       61 ctgctcgcgc acccaacgct gggcggggtt ctccttcaag cggccccggt ggccgccggg
      121 ggccttctcc tcggaggggg ccagcaggat gagcggggcg ccggtcatcg gccccccagc
      181 caggtttcca gggtcgtgag ccggaagccg gcgaagagat cccgcaggtg gccatggtgg
      241 ccccgcaggc ccgcgctgtg cgcgaagcgg tggccaaagg aggcgccggg aaggtccggc
      301 tggccctcgt ccagttccca gggatgcagc accaggggcg tgccggcgtc ctcgagggcc
      361 agggtttcca gggcccggcg aatgacactg aaggggagca cccgcaggcc ccaaccccag
      421 agcggggatc gcgggggccc ggaccacagc accggcggcg gcagctccca gaggttttca
      481 cccagtttgt gcggacgccg gggccaggcg ggattcccga tgaccgagag gggcacgcgg
      541 ctggagtcgt agcggaagcc gaggtccggc aggtccgccc accagccttc ggcggggccg
      601 cgcaggctcc attccggggc gcggtaaccc accacgggag cgccggagag atcctccagc
      661 agggctttgc catcgcgcag agacgccagc cacgtggcgc ggtccatctc gaaggcccgg
      721 cggtgggtca ggccgtgcag cgcgatggcg tggccctcgg ccacgatgcg ccgaagcagc
      781 tggggatgcc gccgcgcctg gtctccgagg cagaaccagg tggctcgggc ccccaactcg
      841 gcgcagagcc ccagggcccg gtccgtggcc agcggaagcc ggcactcgta gcggtccagg
      901 gcctcgggct ggtcgtaggg cgggcagcag agctggaacc agtcctccca gtcgagcgac
      961 aggggcaggc ggggtgggtt caggtgaagt tccgctcgga aaggctgatg aactccagtg
     1021 agaagtcatc gagctcggtc tggaactgct tgagctggcc ctggaagaag ttgtaggcca
     1081 tgagcgccgg gatggccgcc accaggccga tggccgtggc cacgagggcc tcggaaatgc
     1141 ccggcgccac tgtggccagg ttggcgttgc ccgtggcgcc gatgccgcgg aaggcgtcga
     1201 tgatgcccca caccgtgccg aagaggccga tgaaggggct cacggccgcc acggtggcca
     1261 ggccgccgag ggaccgttcc agacggccca tctccaccac gctggcccgc tggaggctgc
     1321 gctccaccgc ctccatgctg cgcagctggg gccggccgtc ctggcccacc tgccgcagct
     1381 ggtaggtgac ttccccgtag cccgccacga agaggcccac cagggggctg agggcgaact
     1441 tctccacctg ctgcttgaat tcccgccagt cggtggcccg cttgaaggcg ctgcggaact
     1501 gctcggacac gtcgcggctc cggcggtaga gcagggcctt gcggatgatc accacccagc
     1561 tcagcaggga gaaggccgcg aggatcacca gcaccgtctt ggaaaccgga cccgcatgga
     1621 gcatgacctc cagcaggttg acctcgctgc ccgtgggtgc cgccagaatc gccatgccgc
     1681 ctccgtcagt gaatgatagc aagcgctgaa ggcgatacac tgcttgcttt gagcgaggct
     1741 ctcatgcacg ttctggtcat tggttcgggg tacgtggggc tggtcgcggc cgcctgcttc
     1801 gcggaggcgg gccaccatat cctcggcgtg gacgtggacg ccgagaaagt ggcgaccctc
     1861 tccaggggcg aatcgcccat cttcgagccc ggcctggacg agctgctcgc caaacatttg
     1921 gcctccggaa ccctgcgctt caccacggac ctcaaggccg gcatcgccca ggccgacgcc
     1981 gccttcatct gcgtgggcac cccccagagc gaagacggca gcgcggacat gaagtacgtg
     2041 ctggccgtgg cgggtcagat cggcgacgcc atggccttgc gcgccaagga cgccaagccg
     2101 ctcatcgtcg tggacaagag caccgttccc gtgggcaccg cggcgcgggt gcatgccgaa
     2161 atcgcggcgc ataccgaccg ggccttcgag gtggtgagca atccggaatt cctgcgtgag
     2221 ggctcggcca tcggcgactt cctggagcct gaccgggtcg tggtgggctg ccgctcggac
     2281 cacgccgaga ctgtgatgaa gggcctctac cagtccttcc tcgaccgcag cggcggcaaa
     2341 tggttccgca tggatccccc cagcgccgag ctgacgaagt acgccgccaa cgccatgctg
     2401 gccctgcgca tcagcttcat caacgagatc gccaacctgg cggaggctgt gggcgccgac
     2461 gtggaccacg tgaaggtcgc catcggcgcc gaccaccgca tcggccccgc cttcctcaac
     2521 cccggcccgg gcttcggcgg ctcctgcttc cccaaggacc tccaggccct cctgaaggtc
     2581 ggccgcgagc agggccaccc catgatgacc ctgtcggcca cggtggaagc caaccgcaac
     2641 cagaagcagg tgctcctccg caaagtgaag gcccacttcg gcgtgaaggc cggcgtgccc
     2701 gcgcccctga agggccgccg cttcgccctg tggggcctgg ccttcaaggc gaacaccgat
     2761 gacatccgcg agagcatggc cctggaactc atcgagggcc tggtgaacct cggcgccgag
     2821 gtggtggccc atgacttcgc cgccatggac gcggtgcggg cgaagatcgg cgacaaggtt
     2881 cgctacgccg ggtcgcccct ggaggcctgc gacggcgccg acgccctgct catcgccacg
     2941 gaatggtctg agtaccgcga ggcggacctc gaggccgtgg ccaaggccct caaggcccgc
     3001 cgcatcttcg acggccgcaa cctcttccgc cccgaagcca tggaagccaa gggctggacc
     3061 taccactccc tgggccggcg ggccgtggag gcgaaatgag gatccatctg gaggatattg
     3121 cccacgcccg cagcggcgac aagggggacg gctcgaacgt gggcgtcatc gcctacacgg
     3181 aggccggatt ccagctcctg cggaaggagc tcaccacgga gcgtgttaaa gatcactttt
     3241 caaccatatg caaaggcagt gttgaacgat tcgaagtccc taaccttaag gcgctcaact
     3301 tcatactcca cgattccctc ggcggtggtg gcagcgaaag cgtgaaaacc gacgcccagg
     3361 gcaagaccca tggccaggcc ctgcttagaa tggaactcga ccttcccgcc agccagtcgc
     3421 tggcggacct gaaaccctga ccccgcaccc acccgcactg gagcaccccc atgggcaacc
     3481 tcggaatgat ggaaatcctg ctgatcggca tcgccctgct gatcttcttc ggcccctccc
     3541 ggctgcccga gctgggcaag agcctgggca agggcatcca ggagttcaag aaggccagcc
     3601 gcgagctgac ggattccgtg aaggaagacg tggccgtgga caaggacaag aagtagctcg
     3661 gcgactccca ccgaccggcc tccccatcga cttggcgttc ctggggaggc cggtcccttt
     3721 cagcgatcga ggaccatggc gattccggcc acgccgcccg agaagatgag cttctgggaa
     3781 cacctgcagg aactgcgggt gcgcatcgtg cgctccctgc tcatcgtggc ggtgggattc
     3841 gcggtcacct acgccttccg cttcaagctc tggacctggg cccagaagcc cttcctcgag
     3901 gccatggccc gccagaccgg caagcccatc ggcaccctcg atcccttcgc cttcaccgac
     3961 ctgaccgaac ccttcttcag catgatgcgg ctctcgctct ggtccgccgc cgtgctctgc
     4021 gcccccttcc tcttctacca gctctgggcc ttcatccggc ccggcctgct gccgaaggag
     4081 cgccgcctcg tcatcccctt cgtgttcgtg acctcgggct gcttcctggc cggcgcggcc
     4141 ttcgcctaca cccaggcctt caagttcctg ggcgacatcc tcttccagga agcggcctcg
     4201 gcgggcctcc gcgccaacct ccacgcctcg gactacctcg acctcttcat ctccaccacc
     4261 ctcatcaccg gcgtgatgtt cgagctgccc gtgctgttct tcttcctggc gaagttccgc
     4321 atcgtgacct cgcgcctcat gctgaagtac tggcgccacg ccaccctggc catcctgata
     4381 tttagcgcct tcttcacgcc gggcgatgtc gtggtcacca ccatcttctt cagcgtggtg
     4441 ctgctgggcc tctacgccat ctccgtgggc gtcgcctggc tcgccgagcc ccgtcagccc
     4501 aggtaggtgg ccaggtcatc caggcaggac gccacggcca ggttgggctc gggcgctttg
     4561 gacagggact gtcgagccgc ggcccctccc atcaacggga ggagcgccgc ctggatccgc
     4621 ccggagaaat ccggcccctg ttccagaacc agcgcgcggc cctcggcggc catggccaag
     4681 gcgttcttcc gctggtgatc gccagcgctg gtgggcagcg gcaccagcac cgcggcacgg
     4741 ccggcggcct tcagctcggc gcaggtgctg gcgcccgacc gcccgatcac caggctggcg
     4801 gcttccatgg cgcggtccac ctcggcgatg aagggcacca gcgcgtggcg ggcatggcgc
     4861 ggccgatcct gcagccgcgc cagttccgca ggacccacct ggtggaggag gtcccattca
     4921 ggctgggcgt ccagcagtgc cggggcgatc tcgaacagg
//
LOCUS       DATGWW010000207         2639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_243365, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000207 DATGWW010000000
VERSION     DATGWW010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2639
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243365"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1940
                     /locus_tag="VK150_03105"
     CDS             <1..1940
                     /locus_tag="VK150_03105"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HLP30323.1"
                     /translation="EAQNKVTFAYLEQLPQRARLRERMTQLWDFEKYSAPFKRGKRYF
                     YSYNTGLQNQSVLYVTEDPKAKGRVLLDPNTLSKDGTVALSGLSLTEDGRLMAYSVSV
                     AGSDWQTWKVRDVATGQDLADEIQWSKASGAAWLKDGSGFYYSRYEAPKEGGALTGVN
                     NNHLLCFHKLGTPQAEDKLVYQRPDQPEWYLGGTVTDDGRWLVITGNKGTNPETSIFL
                     QDLRKPGSPVEPFLDRMDASYTVVDNEGDRFFVTTNQGAPRNRLVAIRKGQADPAQWT
                     EIIPQAKGKDVLEAVSLVGGRFVATWMRDAHSAIEFYDLKGKKTGALALPAMGTAGGF
                     GGRREDFETFYTFGSFTYPGTIYRLDLKTGKSSVFRTPKVAFKPSDYEVEQVFYPSKD
                     GTKVPMFLVHKKGLKLDGQNPTLLYGYGGFNVSLTPAFSVSRMVWLEMGGVFAMPNLR
                     GGGEYGLEWYDAGRKDKKQNVFDDFIAAAEWLIAHKVTSTTKLAINGGSNGGLLVGAC
                     LTQRPDLFGAAVPEVGVMDMLRFHKFTLGWGWKSDYGSSETKEGFDTLMKYSPLHTIK
                     PGVAYPPTLITTGDHDDRVVPAHSHKFTATLQAAQAGPAPILTRIEVSAGHGAGKPTA
                     KAIAERADVFAFLVKQLGMKP"
     gene            2012..>2639
                     /locus_tag="VK150_03110"
     CDS             2012..>2639
                     /locus_tag="VK150_03110"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30324.1"
                     /translation="MPTSLNRSLLLALAATVLVGQTAQAPLAYPATRKGDVVDNYHGT
                     KVADPYRWLEDDHAAETAAWVEAQNKVTQAYLGQIPERKAIEARMTRLWNYEKYGAPS
                     KHGKYYVYSHNSGLQNQAVIYLTERLEEKGRVLFDPNALSKDGTVSLAGLRFSEDGAY
                     VAYSLSKGGSDVSTWKVRNVATGVDLPDSFPAGRLGVNAWAKDGSGFYY"
BASE COUNT          497 a          939 c          821 g          382 t
ORIGIN      
        1 tcgaggccca gaacaaggtc accttcgcct acctggagca gctcccgcag cgcgcccgcc
       61 tccgcgagcg catgacccag ctctgggatt tcgagaagta cagcgcgccc ttcaagcgcg
      121 gcaagcgcta cttctattcg tacaacaccg gcctgcagaa ccagtcggtg ctctacgtca
      181 ccgaagaccc caaagccaag ggccgggtgc tgctggaccc gaacaccctg agcaaggacg
      241 gcaccgtggc cctcagcggc ctcagcctca cggaggatgg gcggctcatg gcctattccg
      301 tgtcggtggc cggttccgac tggcagacct ggaaggtgcg ggacgtggcc acgggccagg
      361 acctcgccga cgagatccag tggtccaagg ccagcggcgc cgcctggctg aaggacggca
      421 gcggcttcta ctacagccgc tacgaagcgc cgaaggaggg cggggccctc accggcgtga
      481 acaacaacca cctgctctgc ttccacaagc tgggcacgcc gcaggccgag gacaagctcg
      541 tctaccagcg gcccgaccag cccgagtggt acctgggcgg caccgtcacc gacgatggcc
      601 gctggctggt gatcaccggc aacaagggga cgaaccccga gaccagcatc ttcctgcagg
      661 atctccgcaa gccgggcagc cccgtggaac ccttccttga ccgcatggac gccagctaca
      721 ccgtggtgga caacgaaggc gaccggttct tcgtgaccac caaccagggc gcgccccgga
      781 atcgcctggt ggcgatccgg aaaggccagg ccgatcccgc ccagtggacc gagatcatcc
      841 cccaggccaa gggcaaggat gtgctcgagg ccgtgtccct ggtgggcggc cgcttcgtcg
      901 ccacgtggat gcgcgatgcc cactcggcca tcgagttcta cgacctgaag ggcaaaaaga
      961 ccggcgccct ggcgctgccg gccatgggca ccgccggcgg cttcggcggg cggcgcgaag
     1021 actttgagac cttctacacc ttcggcagct ttacctatcc gggcaccatc taccgcctgg
     1081 acctgaagac cggcaagagc agcgtcttcc gcacgcccaa ggtggccttc aagccctccg
     1141 actacgaggt ggagcaggtt ttctacccca gcaaggacgg cacgaaggtg cccatgttcc
     1201 tggttcataa gaaagggctc aagctcgacg gccagaaccc gacgctgctc tacgggtacg
     1261 gcggcttcaa cgtttcgctc acccccgcct tctccgtgtc ccgcatggtc tggctggaga
     1321 tgggcggcgt cttcgcgatg cccaacctgc gcggcggcgg ggagtacggc ctcgagtggt
     1381 acgacgcggg ccgcaaggac aagaagcaga acgtcttcga tgacttcatc gccgcggccg
     1441 agtggctcat cgcccacaag gtcacctcca cgacgaagct ggccatcaac ggcggcagca
     1501 acggcggcct gctggtcggc gcctgcctca cccagcgccc cgacctcttc ggcgccgccg
     1561 tgcccgaagt cggcgtcatg gacatgctcc ggttccacaa gttcaccctc ggctggggct
     1621 ggaagagcga ctacggcagc agcgagacca aggagggctt cgacaccctc atgaagtact
     1681 cgcccctgca caccatcaag ccaggcgtgg cctacccgcc caccctgatc accaccggcg
     1741 accatgacga ccgcgtggtg cccgcccaca gccacaagtt cacggccacc ctgcaggccg
     1801 cccaggctgg ccccgcgccc atcctcaccc gcatcgaggt gagcgccggc cacggggcgg
     1861 gcaagcccac cgccaaggcc atcgccgagc gggccgacgt cttcgccttc ctggtgaagc
     1921 agctgggcat gaagccctga aggctggttc agccttgtga tacgaggtat cctgggggac
     1981 accacccatg tgtcccccag gaggttgctg catgccaaca tctctgaacc gatctctgct
     2041 gctggccctc gcggccacag tcctggtggg tcaaaccgcc caggcgccgc tggcctaccc
     2101 cgccacccgc aagggcgacg tggtggacaa ctaccacggc acgaaggtgg cggatcccta
     2161 ccgctggctg gaggatgacc acgccgccga gaccgccgcc tgggtggagg cccagaacaa
     2221 ggtgacccag gcctacctgg ggcagattcc cgagcggaag gccatcgagg cccgcatgac
     2281 ccggctctgg aactatgaga agtacggcgc gcccagcaag cacggcaagt actacgtgta
     2341 ttcccacaac tccgggctgc agaaccaggc cgtcatctac ctcactgagc gcctggagga
     2401 gaagggccgt gtgctcttcg atcccaacgc cttgagcaaa gacggcaccg tgtcccttgc
     2461 cggcctgcgg ttcagcgagg acggcgccta tgtcgcctac agcctctcca agggcggctc
     2521 cgacgtgagc acctggaagg tccgcaacgt ggccaccggc gtggacctgc ccgacagctt
     2581 ccccgccggc cgcctgggcg tgaacgcctg ggccaaggac ggcagcggct tctactaca
//
LOCUS       DATGWW010000208         3862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_371177, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000208 DATGWW010000000
VERSION     DATGWW010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3862
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371177"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..579
                     /locus_tag="VK150_03115"
     CDS             <1..579
                     /locus_tag="VK150_03115"
                     /inference="COORDINATES: protein motif:HMM:NF014869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M4 family metallopeptidase"
                     /protein_id="HLP30325.1"
                     /translation="AGHEMTHGVTSRTANLTYRAESGGLNESMSDIFGTMAEFYRGST
                     GSTIPATGGNWTIGEQLATPAFNKPLRYMYKPSLDGSSPNAWSSSLKRLDVHYSSGPM
                     NRCFYFLSQGASNVSTSNFYSSYLPGGMTGIGNDKAARIVYKALTAYMTSSTNYAGAK
                     TACLNAAVALGYPAGSVEYTAVVNAFKAINVN"
     gene            684..1409
                     /locus_tag="VK150_03120"
     CDS             684..1409
                     /locus_tag="VK150_03120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30326.1"
                     /translation="MSSPARRTCPSCQTRLSPLAAECPECGLALAPPRLGRPLLFQAS
                     ALAQVSFEAPPRALTAPALGRVAPVAVEVDPGELVRPEAPATHPPHDPARGAQPALAG
                     QEPVASFWPLVKVEASEAALLLLVQGLALLLPAWSLGVSPARLFTGAWPLVLPYLFSV
                     SWIFFMAPLVLTGQSPLMGLFGVTLPENSPDRRIAFSLTHLLSVVCFPLSFLCMVLSP
                     RHQTLAELLSGQELLARPLPRLR"
     gene            complement(1422..3311)
                     /locus_tag="VK150_03125"
     CDS             complement(1422..3311)
                     /locus_tag="VK150_03125"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HLP30327.1"
                     /translation="MANFRRLLLGRRLASEEIHEARISNPIALAVFSSDALSSVAYAT
                     GEIMAALAPYMALATFGPAVISQSWPVAVGIVLLLVILTVSYRQTIFAYPSGGGAYIV
                     AKENLGELPAQVAGASLLVDYVLTVAVSVSAGVTAITSAFPALDAHRVFLGVAVIAFV
                     GLMNLRGVKESGAVFALPTYGFVVSMFAIIGLGFWRYFTGSMQAAVHHEIAPPPFPGW
                     IAIWVFMKAYAAGCTALTGVEAISNGVSAFREPTSRNASNTMVSMVLMLGAMFLGITW
                     LANHMGVTYTGGAESLLSMLSRRILGDGPGLPHVAYLAVQTFTMLILLLAANTAYADF
                     PRLGAMMARDGFLPRQFASQGDRLVFSNGIFILSFLSALLVWIFNAKEHHLLPLYALG
                     VFLGFTLSQTGMVRHWLKERGRHWGLKAVINGTGAITTLVVMIVITTTKFTHGAWVVV
                     LVLPIMVFGFYNIHRHYIRVKSILAGSRADFISPRKNRVVVLVSGIHSGVVQALNYAK
                     VIADHGEVEALTVDFPDENGRDSAALERLRSDWPRYCEGIPLRSLRSPYRKIVEPIVD
                     ELDRMRRVEPEYTITVILPEFVTGHWWANILHNQTAWRIKGTLLMKPKTVVISIPYHL
                     EPILE"
     gene            complement(3329..3739)
                     /locus_tag="VK150_03130"
     CDS             complement(3329..3739)
                     /locus_tag="VK150_03130"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HLP30328.1"
                     /translation="MAWLSWALAAMVLMGFANLGMKAASLKGLSPASTLLWVVAGELP
                     LALAYWFWRGRPESPAGGMTWALVAGLFTAAALILVNESFFRGAKAAVGIGIMNANFI
                     VVALLAFLLFQERLQPSKLVGLAATLSGLWLMAR"
BASE COUNT          654 a         1357 c         1256 g          595 t
ORIGIN      
        1 gcgggccacg agatgaccca cggcgtgacc tcgcgcaccg ccaacctcac ctaccgtgcg
       61 gaatccggtg gcctgaacga atccatgtcc gacattttcg gcaccatggc cgagttctac
      121 cgcggctcca ccggcagcac catcccggcc actggcggca actggaccat cggcgagcag
      181 ctggccacgc ccgccttcaa caagcccctg cgctacatgt acaagcccag cctggatggc
      241 agcagcccca acgcctggtc ctccagcctg aagcgcctcg acgtgcacta cagctccggc
      301 cccatgaacc gctgcttcta cttcctcagc cagggcgcca gcaatgtgag cacgagcaac
      361 ttctacagct cgtacctgcc cggcgggatg accggcatcg gcaacgacaa ggccgcccgc
      421 atcgtctaca aggccctcac agcctacatg acctccagca ccaactacgc cggcgccaag
      481 accgcctgcc tgaacgccgc cgtggccctg ggctaccccg cgggctccgt ggaatacacg
      541 gccgtggtga acgctttcaa ggccatcaac gtcaactgac agccctgatc tcgaccaggc
      601 ggggacccgg gcgaccgggt ccccgtcgcg ttcagggccg cattccccct ggtcgcctcc
      661 tccggcccgg gcgatagttg ggcatgtcct cgcccgcccg gcgcacctgc cccagctgcc
      721 agacccgcct atcgcccctc gcggcggaat gccccgagtg cggcctggcg ctggccccgc
      781 cccggctggg acggcccctg ctcttccagg cgtccgccct ggcccaggtt tctttcgagg
      841 cgccgccccg ggccctgacg gcccccgccc ttggccgggt ggcgcccgtg gccgtggagg
      901 tggatccggg ggagttggtg cgccctgagg ccccggccac ccaccctccc cacgatcccg
      961 cccgcggggc ccagcccgcc ctggctgggc aggagcccgt ggccagtttc tggcccctgg
     1021 tgaaagtcga ggccagtgaa gcggcgctgc tgctcctggt gcagggcctg gcgctgctgc
     1081 tgcccgcgtg gagcctcggg gtctccccgg cgcgcctgtt cacgggtgcc tggcccctgg
     1141 tgctgcccta cctcttctcg gtgtcctgga ttttcttcat ggcgcccctg gtgctcacgg
     1201 gccaatcgcc cctgatgggc ctcttcggcg tcaccctgcc cgagaacagc cccgaccggc
     1261 gcatcgcctt ctccctcacc cacctgctct cggtggtctg cttccccttg agcttcctct
     1321 gcatggtgct gagcccccgg caccagaccc tggccgagct gctcagcggg caggagctgc
     1381 tggcgcgccc cctgccccgc cttcgctgag cggcggccgc cctattcgag gatcggctcg
     1441 aggtggtagg ggatggagat caccacggtc ttgggcttca tgagcagggt gcccttgatg
     1501 cgccaggccg tctggttgtg caggatgttc gcccaccagt gccccgtcac gaattccggc
     1561 aggatcaccg tgatggtgta ttccggctcc acgcggcgca tgcggtccag ctcgtccacg
     1621 atgggctcga cgatcttccg gtaggggctg cgcaatgacc gcagggggat gccctcgcag
     1681 tagcgcggcc agtcggagcg caggcgctcc agggccgcgc tgtcccggcc gttctcgtcc
     1741 gggaagtcca cggtgagggc ctccacctct ccgtggtcgg cgatgacctt cgcgtagttg
     1801 agggcctgca ccacgccgga gtggatgccc gagaccagca ccaccacgcg gttcttgcgg
     1861 gggctgatga agtccgcccg gctgcccgcc aggatggatt tcacgcggat gtagtggcgg
     1921 tggatgttgt agaagccgaa caccatgatg ggcaacacca gcaccaccac ccaggcgcca
     1981 tgcgtgaact tcgtcgtcgt gatcacgatc atgaccacca gcgtggtgat ggcccccgtg
     2041 ccgttgatga cggccttgag gccccaatgc cggcctcgct ccttcagcca gtgccgcacc
     2101 atgcctgtct gcgacagggt gaagcccagg aagacgccca gggcataaag gggcagcagg
     2161 tgatgctcct tcgcattgaa gatccacaca aggagggcgg agagaaacga caggatgaag
     2221 atgccgttgg agaacacgag acggtcgccc tggctggcga actggcgggg caggaagccg
     2281 tcccgggcca tcatcgcccc gagtcgcggg aaatccgcgt aggcggtgtt tgccgcgagc
     2341 agcaggatca gcatggtgaa ggtctggacg gccaggtagg ccacgtgggg caagcccggg
     2401 ccatctccga ggatgcggcg gctgagcatg gacagcagcg attccgcccc gcccgtgtag
     2461 gtcacgccca tgtggttcgc cagccacgtg atgcccagga acatggcccc cagcatgagc
     2521 accatggaca ccatggtgtt ggaggcattg cgcgacgtgg gttcgcggaa ggccgacacc
     2581 ccgttcgaga tggcctccac gcccgtgagc gccgtgcacc cggcggcata agccttcatg
     2641 aagacccaga tcgcgatcca gcccggaaag ggcggcgggg cgatctcgtg gtgcaccgca
     2701 gcctgcatgc tgcccgtgaa atagcgccag aagcccaggc cgatgatcgc gaacatcgac
     2761 accacgaacc cgtaggtcgg aagcgcgaag acggctccgc tctccttgac gccgcggagg
     2821 ttcatgagcc ccacgaacgc gatgacggcc acgcccagga acacccggtg ggcgtccagg
     2881 gccgggaagg cgctggtgat ggcggtgacg ccggcggaca cgctcacggc cacggtcaac
     2941 acgtagtcca ccaggaggga agcccccgcg acctgggctg gcagctcgcc gaggttttcc
     3001 ttcgccacga tgtaggcgcc cccgccgctg ggataggcga agatcgtctg gcggtagctc
     3061 acggtgagaa tgaccagcag caggacgatg cccacggcca cgggccagga ctggctgatg
     3121 acggcggggc cgaaggtggc cagggccatg taaggggcca gggcggccat gatttcgccc
     3181 gtggcgtagg cgactgagga gagcgcgtcg gaactgaaga ccgccagcgc gatgggattg
     3241 ctgatccgcg cttcgtgaat ctcttcgctg gcgaggcgcc ggcccagcag gagtcgtcga
     3301 aaattggcca tgggtcagca gtcctggttc atcgggccat caaccatagc ccggagaggg
     3361 tcgcggccag gccgaccagc ttggagggct ggagccgctc ctggaacagc aggaaggcca
     3421 ggagggcaac cacgatgaag ttggcgttca tgatgccgat gcccacggcc gcctttgcgc
     3481 cacggaagaa gctctcgttc acgaggatca gcgcggcggc cgtgaacagg cccgccacca
     3541 gcgcccaggt catgccgccc gcagggctct ccggccggcc ccgccagaac cagtaggcca
     3601 gcgccagggg cagctcgccg gccaccaccc agagcagtgt ggacgcggga gagagaccct
     3661 tcaggctggc cgccttcatg cccagatttg cgaatcccat cagaaccatt gccgccagtg
     3721 cccagctcaa ccacgccata ccttgcacac tccaaaggat cccattatgg ccgttgctgc
     3781 ggatcgtggg ggcaagggtt gacggtcgcc acagcgaatt cacgaatcct gctccaaccg
     3841 gcgcagcgcc agcgcctcga cc
//
LOCUS       DATGWW010000209         1520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_289869, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000209 DATGWW010000000
VERSION     DATGWW010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_289869"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..340
                     /locus_tag="VK150_03135"
     CDS             <1..340
                     /locus_tag="VK150_03135"
                     /inference="COORDINATES: protein motif:HMM:NF016296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HLP30329.1"
                     /translation="LGGGPVRFPVKAGDGVVLVDLAKTTHFVFEEDAVWAFAGERLRT
                     TWKTLAEAEAALGSRVVRAHRHLLIRPEAVVGVRAGDSGRLKVRLAGGTELEVSRGAA
                     PGLKARLGLG"
     gene            complement(448..828)
                     /locus_tag="VK150_03140"
     CDS             complement(448..828)
                     /locus_tag="VK150_03140"
                     /inference="COORDINATES: protein motif:HMM:TIGR00004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HLP30330.1"
                     /translation="MPMRTISTPNAPAAIGPYSQAQISGNHLYTSGQIPLVPETMEMV
                     TGPIEDQAHQVLKNLSAVLAAANTGWDRVVKTTVFLTDMADFAAFNATYEQALGSAKP
                     ARSTVQVAALPRGAKVEIELIAEV"
     gene            complement(847..>1520)
                     /locus_tag="VK150_03145"
     CDS             complement(847..>1520)
                     /locus_tag="VK150_03145"
                     /inference="COORDINATES: protein motif:HMM:NF016330.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SWIM zinc finger family protein"
                     /protein_id="HLP30331.1"
                     /translation="QGLDETFREAGASLYPRVPKELQTHCDCPDWANPCKHVAAVCYV
                     MAEALDRDPWLLFDLRGKSRDEVLQALQSALDAAAVAAPKKRGRPPKKKQTVADLLRR
                     ELPEPEPWRRLPEEAYDALPMPLPEISIPRVIPPDPSVFTQLGPLPHARIETSLCLAA
                     LMHRTAQWVQQQIEEGPRRLDDGEADGELEQPASPFDAPLQPAPKASRNWRHKKRRWG
                     KKGGQ"
BASE COUNT          202 a          462 c          597 g          259 t
ORIGIN      
        1 cctaggcggc ggccctgtcc ggttcccggt gaaggcgggc gatggcgtgg tgctggtgga
       61 tctggcgaag accacccact tcgtcttcga ggaggacgcg gtgtgggcct tcgcgggcga
      121 gcgcctgcgc acgacctgga agaccctggc cgaggcggaa gcggccctgg gcagccgggt
      181 ggtgcgggcc caccggcacc tgctcatccg gcccgaggcg gtggtgggtg tgcgggccgg
      241 agattccggc cgcttgaagg tccgcctggc cgggggaacc gagctggagg tgagccgcgg
      301 cgcggcgccg gggctcaagg caaggctggg gctgggctag aacagaacaa gctcaccacc
      361 aagacaccag gaaagatctt ttgcagttct tggtgccttg gtgtcttggt ggtgattctt
      421 tgtttcctga catcccaagc gaggtgatca gacttccgcg atcagctcga tctcgacttt
      481 ggcgccgcgg ggcagggccg ccacctgcac ggtgctgcgc gcgggcttgg cgctgcccag
      541 ggcctgctcg taggtggcgt tgaaggcggc gaaatcggcc atgtccgtga ggaagacggt
      601 ggtcttcacc acccggtccc agccggtatt ggcggcggcg agcacggcgc tgaggttctt
      661 gagcacctgg tgggcctggt cctcgatggg gccggtcacc atctccatgg tctcgggcac
      721 caggggaatc tgccccgagg tgtagaggtg gttgcccgag atctgggcct ggctgtaagg
      781 gccgatggcg gcgggggcat tcggcgtgga gatggtgcgc atgggcatgg aagctcctgg
      841 aacgggctat tgtccgcctt ttttgcccca gcgccgcttc ttgtgacgcc agttgcggct
      901 ggccttcggg gcgggctgga ggggggcatc gaagggcgaa gcgggctgct caagctcgcc
      961 atcggcctcg ccgtcatcga ggcggcgggg gccctcctcg atctgctgct gcacccactg
     1021 ggcggtgcgg tgcatgaggg cggccaggca gaggctggtc tcgatgcggg cgtggggcag
     1081 gggccccagc tgcgtgaaca cggacgggtc cggcgggatc acgcggggga tgctgatctc
     1141 gggcaggggc atgggcaggg cgtcgtaggc ctcttccggc aggcggcgcc agggctcggg
     1201 ctcgggcaat tcccgccgca ggagatccgc gaccgtctgc ttcttcttgg gcggccggcc
     1261 gcgcttcttc ggggcagcca cggcggcggc gtccagggcg gactgcaggg cctgcagcac
     1321 ctcgtcgcgg ctcttgccac gcaggtcgaa gagcagccag ggatcgcggt ccagggcctc
     1381 ggccatcacg tagcagaccg ccgccacgtg cttgcaggga ttggcccagt ccgggcagtc
     1441 gcagtgggtc tgcagctcct tgggcacccg ggggtagagg ctggccccgg cctcgcggaa
     1501 ggtctcgtcc agcccctggg
//
LOCUS       DATGWW010000210         2063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_16528, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000210 DATGWW010000000
VERSION     DATGWW010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16528"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(483..>2063)
                     /locus_tag="VK150_03150"
     CDS             complement(483..>2063)
                     /locus_tag="VK150_03150"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30332.1"
                     /translation="GVSAPAASPLKLRSELEEARATREALLDRLEDLEARRGKGGDEA
                     REARERSVEIDEDLRSLRRRTDTLKAQKTALSSQLAEIRAASERADALWEQIEGEIKR
                     LQGLLRELEEHPEEAVDAALEASIQEAELKVREARLRLDERRDQRMETARSRDAAWAE
                     RDGHERHLQLSQRGRFDLEAERQRLEAESAEQAERVEACVKRLAELEHESQTLLGERE
                     AVHQQAQEAQPRLELDQESLRVQERSAREFQEALENARAQHQEVLIHGAQVQGSQEAL
                     AKEVELALGADVPTFLAGITDEEREAWVEGELVHQTRLNELQGRRMDLGGVNPLAIQE
                     LEEAETRLGFMNEQRADVTAAIANLESTIQEINATSEDRFREAFDFVNTRFQEVFREA
                     FGGGNAHLSLEDPKNLLECGIEITAQPPGKTAKALTLLSGGEKALTAISLLFAIFHFK
                     PSPFCVLDEVDAPLDEANVGRFAAMVQKMKSDTQFIVITHQKPTMVAADTLYGVTMEE
                     AGCSRLVSVQLREAEALV"
BASE COUNT          281 a          699 c          705 g          378 t
ORIGIN      
        1 gacgagggcc agagcctgaa gatggccacc gagcacctcg cgagcctggg cgtggacgac
       61 gccaccatcc gcgaatggct gcggccggac ttcctggtgg ccgaatcgaa ccggtgaccg
      121 cttcgtcacc gattcgtcac accagcgttt ccaggcagtt acacaaaggc ctttccggcc
      181 ctgtggaaaa gcctgcggat tgacctcatt ccgggcctct aaaccttgtc cagatatgga
      241 tttcccggcg caaaaaggcg aaaatccgat ctatcttaac cattatattt caatctttag
      301 cattgatgat cctggcggat tttgccgggc atcgcgaagt cggggttttc cacaatttcc
      361 gttttctttc gcgttgacag cgaagaagcc cttgaggccc ggtgaggagg ggcgaaaagg
      421 gctggcgtca acccattccg tgacgccgcc gtcacccctt ggactgaccc agacgggtcg
      481 gctcagacca gggcctcggc ctcccgcagc tggacgctca ccaggcggga gcagcccgcc
      541 tcctccatgg tgacgccgta gagggtgtcc gccgcgacca tggtgggctt ctggtgcgtg
      601 atgacgatga actgggtgtc gctcttcatc ttctgcacca tggccgcgaa ccggcccacg
      661 ttggcctcgt cgaggggggc gtccacctcg tccagcacgc agaaggggct gggcttgaag
      721 tggaagatgg cgaagagcag cgagatggcc gtgagcgcct tctcgccgcc gctcagaagg
      781 gtgagggcct tggcggtctt gccgggcggc tgggccgtga tctcgatgcc gcattccagg
      841 aggttcttgg gatcctccag gctgaggtgg gcgttgccgc cgccgaaggc ctcgcggaag
      901 acttcctgga aacgcgtgtt cacgaagtcg aaggcctcgc ggaaacggtc ctcgctggtg
      961 gcgttgatct cctggatggt ggactccagg ttggcgatgg cggcggtgac gtcggcccgc
     1021 tgctcgttca taaagccgag gcgggtttcg gcctcctcca gctcctggat ggccaggggg
     1081 ttcacgccgc ccaggtccat gcgacgcccc tgcagctcgt tcaggcgcgt ctggtggacc
     1141 agttcgccct cgacccaggc ctcgcgctcc tcgtcggtga tgccggcgag gaaggtgggc
     1201 acgtcggcgc ccagggccag ctccacctcc ttcgccaggg cctcctggct gccttgcacc
     1261 tgggcgccgt ggatgagcac ctcctggtgc tgggcccggg cgttctccag agcctcctgg
     1321 aactcgcggg cggagcgttc ctggacgcgc agggattcct ggtccagctc caaccggggc
     1381 tgggcctcct gggcctgctg gtggacggcc tcccgctcgc ccagcagggt ctgggattca
     1441 tgctcgagct cggccaggcg cttgacgcag gcctccaccc gctcggcctg ctcggcggat
     1501 tcggcctcca ggcgttgccg ctcggcctcc aggtcgaagc ggccccgctg ggagagctgc
     1561 aggtggcgct cgtggccatc ccgctcggcc caggccgcgt cgcggctgcg ggccgtctcc
     1621 atgcgctggt cgcggcgctc gtccaggcgc aggcgcgcct cgcgcacctt gagctccgcc
     1681 tcctggatcg aggcctccag ggcggcgtcc acggcctcct cggggtgttc ctcgagctcc
     1741 cggagcaggc cctggagccg cttgatctcg ccttcgatct gctcccacag ggcgtcggcg
     1801 cgctcgctgg cggcgcggat ctcggccagc tggctcgaga gggcggtctt ctgggccttg
     1861 agcgtgtccg tgcggcggcg cagggagcgg aggtcctcgt cgatctccac ggaccgctcc
     1921 cgggcctcgc gcgcttcgtc gccgcccttg ccccggcggg cttccaggtc ctccaggcgg
     1981 tcgagcaggg cttcccgggt ggcccgggcc tcctccagct cggagcgcag cttcaggggc
     2041 gaggccgcgg gagccgacac ccc
//
LOCUS       DATGWW010000211         1795 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_425382, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000211 DATGWW010000000
VERSION     DATGWW010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425382"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..634
                     /locus_tag="VK150_03155"
     CDS             <1..634
                     /locus_tag="VK150_03155"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HLP30333.1"
                     /translation="PSKLRLLDAALKVFRAKGYTATRLEDICAEAGVTKGSFFHHFSG
                     KEDLAVAAAGHWSTTTAGIFQQAPYQAHADPLVRLLAYVDFRKSLLRGEPAEFTCLAG
                     TLVQETFETSPAIREACDGAISGHAAAVARDIAEAKARYAPDAAWTAEGLALHTQAVI
                     QGAFILAKARHGAQVAVDSLDHLRRYLELLFNPPKEETCSHPAGPSSGTN"
     gene            595..1368
                     /locus_tag="VK150_03160"
     CDS             595..1368
                     /locus_tag="VK150_03160"
                     /inference="COORDINATES: protein motif:HMM:NF037170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLP30334.1"
                     /translation="MQPPSGTFIWYELNTGNSAAAQAFYGQVLGLSATPFADDGGYTL
                     LSTPAGQVGGVMALPDNACDQHAKAGWVGYIGVEDVDATAQRIRAAGGTLLRDPWDIP
                     GVGRLAVAADPHGAVFLLIRGATEAPKPKVPAGTAGHIGWHELHAGEGQAAFAFYSAL
                     FGWTKDQAVDMGPLGVYQTFCTGEGPADGGMMTRMPDTPHPFWLYYFNVAALDPAIER
                     VKRGGGQVLMGPHEVPGGRWIAQCVDPEGALFALLAPHC"
     gene            1431..>1795
                     /locus_tag="VK150_03165"
     CDS             1431..>1795
                     /locus_tag="VK150_03165"
                     /inference="COORDINATES: protein motif:HMM:NF024867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLP30335.1"
                     /translation="MLSSLRIQNLALVEDLSLDWGPGFTVLTGETGAGKSLLVDALSL
                     LVGARGDGELVRHGAERATVEAVVEGRFEAWRAFLAERGLPEEQPVVLRREVGQGRSR
                     AWINGSPATVAQLREAADHL"
BASE COUNT          254 a          640 c          655 g          246 t
ORIGIN      
        1 cccgtcgaag ctccggctcc tggacgccgc tctcaaggtg ttccgggcca aggggtacac
       61 ggccacccgc ctggaggaca tctgcgctga ggcgggggtg acgaagggga gcttcttcca
      121 ccacttcagt gggaaggagg acctcgccgt ggcggcggcc gggcactggt ccaccacgac
      181 tgccgggatc ttccagcagg ccccctacca ggcccatgcc gatcccctgg tccgccttct
      241 ggcctatgtg gatttccgca agtcgctcct ccgcggcgaa ccggcggaat tcacctgcct
      301 ggcgggcacc ctggtgcagg agaccttcga aaccagcccc gccatccggg aggcctgcga
      361 tggcgccatc agcggccacg cggcggcggt ggcccgggac atcgccgagg ccaaggcgcg
      421 ctacgcgccg gacgcggcct ggacggcgga gggactggcc ctgcacacgc aggccgtgat
      481 ccagggggcc ttcatcctgg ccaaggcccg ccacggcgcg caggtggccg tagacagcct
      541 cgatcacctg cgccgctacc tcgaactgct cttcaatcca cccaaggagg agacatgcag
      601 ccacccagcg ggaccttcat ctggtacgaa ctgaacacgg ggaacagcgc ggccgcccag
      661 gccttctacg ggcaggtgct gggcctcagc gccacgccct tcgcggacga cggcggctac
      721 acgctgcttt cgacgcctgc ggggcaggtg gggggcgtca tggccttgcc tgacaacgcc
      781 tgcgaccagc acgcgaaggc gggctgggtg ggttacatcg gcgtggaaga cgtggacgcc
      841 acggcccagc ggatccgcgc cgcgggcggc acgctgctcc gcgacccgtg ggacatcccc
      901 ggcgtcggcc gcctcgcggt ggcggccgac cctcacggcg cggtcttcct cctcatccgg
      961 ggagcgacgg aggccccgaa gcccaaggtg ccggcgggga cggccggcca catcggctgg
     1021 cacgagctgc acgccggcga ggggcaggcg gccttcgcgt tctactcggc gctctttggc
     1081 tggacgaagg accaggccgt ggacatgggg cccctgggcg tctaccagac cttctgcacc
     1141 ggcgagggtc cggcggacgg cggcatgatg acgcggatgc cggacacgcc ccaccccttc
     1201 tggctctatt acttcaacgt cgcggcgctg gatccggcca tcgagcgggt gaagcggggc
     1261 ggcggccagg tgctcatggg tccccacgaa gtgccgggcg gccggtggat cgcccagtgc
     1321 gtggacccgg aaggggccct gttcgccctg ctggcgcccc attgctgagg ccggaggtgg
     1381 cctcgtcccc tgactgaccg cctcacccgg ccccaggcta gactggccgg atgctctcat
     1441 ccctccgcat ccagaacctg gccctggtcg aggacctgtc cctggactgg ggccccggct
     1501 tcacggtgct caccggcgag accggcgcgg gcaagtccct gctggtggac gcgctctcgc
     1561 tgctggtggg cgcgcggggg gacggcgagc tggtgcggca cggggccgag cgggccacgg
     1621 tggaggcggt ggtcgaaggc cgcttcgagg cctggcgcgc cttcctggcg gaacggggcc
     1681 tgcccgagga acagcccgtg gtgctgcgcc gggaagtggg ccagggccgc agccgcgcct
     1741 ggatcaacgg cagcccggcc accgtggcgc agctgcgcga ggcggccgac cacct
//
LOCUS       DATGWW010000212         2619 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_371279, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000212 DATGWW010000000
VERSION     DATGWW010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2619
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371279"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..457
                     /gene="deoC"
                     /locus_tag="VK150_03170"
     CDS             <1..457
                     /gene="deoC"
                     /locus_tag="VK150_03170"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004139 - deoxyribose-phosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HLP30336.1"
                     /translation="RAKAFEAETALRDGALEVDMVLAVGAAKGGDWDTVQRDLETLRA
                     AVPAPTVLKVILETCLLDDAEKTRACELARDAGLDFVKTSTGFSTGGATEADVALMRR
                     VVGSSVGVKASGGIRTYEVARGMVFAGATRLGLSASVAVVSGGTGAGAY"
     gene            500..997
                     /locus_tag="VK150_03175"
     CDS             500..997
                     /locus_tag="VK150_03175"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HLP30337.1"
                     /translation="MAKLDLMLFEEEYKLLQEIIGRLEKDASAKVVFLVDKNGQQIAA
                     AGDVKSIDATSLASLTAGNVAATDGLAKLIGEKEFSLLFHEGEKDNLHISIVGKRGIL
                     VVIFDQNSSLALVRLRVKKASKELQEIFDQVEQRAQKESDAGGRFESPFSEITDEDID
                     RLFGD"
     gene            1013..1597
                     /locus_tag="VK150_03180"
     CDS             1013..1597
                     /locus_tag="VK150_03180"
                     /inference="COORDINATES: protein motif:HMM:NF012255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase domain-containing protein"
                     /protein_id="HLP30338.1"
                     /translation="MTFINYASREINCKIVYYGPGLCGKTTNIQWIFEQANPDKRGKL
                     VSLATETDRTLFFDFLPLDMGTVKGFKVRFHLYTVPGQVFYDASRKLILRGCDGIIFV
                     ADSQRARMEANIESIANLATNLKENGFDIRSIPYVLQLNKRDMPSAAPVSEMERLLRF
                     RNEPMIEAVANVGTGVIDTLKAAARQVLMELQRS"
     gene            1675..1750
                     /locus_tag="VK150_03185"
     tRNA            1675..1750
                     /locus_tag="VK150_03185"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1708..1710,aa:Asn,seq:gtt)
     gene            2059..>2619
                     /locus_tag="VK150_03190"
     CDS             2059..>2619
                     /locus_tag="VK150_03190"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLP30339.1"
                     /translation="MQTSTLRAVIDSVHAPVFAVDRQYRYTIFNRDHAAAMKALYGVD
                     IQIGRSLLDCMTVPEDRAVAQANLDRALGGERFVEEAYSGEELRSRQYFQISHSPIRM
                     DGGEIIGVAMVAQEITERRRAEEVLRESEVMYRSLVTAMAEGVVLQGATGEITAINPA
                     AMRIEGRSREDLLGRRSEDPVWDAVRG"
BASE COUNT          477 a          820 c          889 g          433 t
ORIGIN      
        1 ccgggccaag gccttcgagg ctgagaccgc cctcagggac ggcgccctgg aggtggacat
       61 ggtgctggcg gtcggcgcgg ccaagggcgg cgactgggac acggttcagc gggacctgga
      121 gaccctgcgg gcggctgttc cggccccgac ggtgctgaag gtgatcctgg agacctgcct
      181 cctggacgac gcggagaaga cccgggcctg cgagctcgcc cgggacgcgg ggctggattt
      241 cgtgaagacc tccacgggct tctccaccgg cggggccacc gaggcggatg tggcgctcat
      301 gcgccgggtg gtgggctcca gcgtgggcgt gaaggcttcc ggcggcattc gcacctacga
      361 ggtcgcccgc gggatggtgt ttgccggcgc cacgcgcctg ggactctcgg cctcggtcgc
      421 cgtggtcagc ggcggtacgg gcgcgggggc ctactgaaaa gtgcggtatc ctcagcttgc
      481 aatccccccg gaggcgatca tggcgaagct tgatctcatg ttgtttgagg aggagtacaa
      541 gctcctccag gagatcatcg gtcgcctcga aaaggacgcc tccgccaagg tggtcttcct
      601 ggtggacaag aacggccagc agattgccgc ggccggggat gtgaagagca tcgacgccac
      661 cagcctcgcc tcgttgaccg ctggcaatgt ggccgccacc gatggcctgg ccaagcttat
      721 cggggagaag gaattcagcc tcctcttcca tgagggcgag aaggacaacc tgcacatctc
      781 catcgtgggc aagcgcggca tcctggtcgt gatcttcgac cagaactcca gcctcgccct
      841 ggtgcgcctc cgggtgaaga aggccagcaa ggaactgcag gagatcttcg accaggtgga
      901 acagcgcgcc cagaaggaat ccgacgccgg gggccgcttc gagagcccct tctccgagat
      961 caccgacgaa gacatcgacc gcctcttcgg cgattgatcc tcggggcgcg ccatgacctt
     1021 catcaactac gcgtcgcgag agatcaactg caaaatcgtg tactacgggc ccgggctctg
     1081 cggcaagacg accaacatcc agtggatctt cgagcaggcc aaccccgaca agcggggcaa
     1141 gctcgtcagc ctcgccaccg agactgatcg caccctgttc ttcgacttcc tgcccctcga
     1201 catgggcacg gtcaagggct tcaaggtccg gttccacctc tacacggtgc ccggccaagt
     1261 cttctacgac gccagccgga agctcatcct ccgcggctgc gacggcatca tcttcgtcgc
     1321 ggacagccaa cgggccagga tggaggccaa catcgaatcc atcgcgaacc tggccaccaa
     1381 cctcaaggag aacgggttcg acatccgctc gattccctac gtcctccaac tcaacaagcg
     1441 ggacatgccc tcggcggccc ctgtgtccga gatggagcgc ctcctccggt tccggaatga
     1501 gcccatgatc gaggccgtgg ccaacgtggg caccggcgtc atcgacaccc tcaaggccgc
     1561 tgcccgccag gtgctcatgg agctccagcg gagctgagga ccgacccgga tcacaggccc
     1621 caagcctggc gcttgaatcc ccgcgcccat ccggtagaat ggacccttgc cctttccgga
     1681 gtagctcagg ggtcagagcg ggtgactgtt aatcactagg tcgggggttc aaatccctcc
     1741 tccggagcca gacaaagcca gaggtcccat cgggacctct ggccgtttct ggtgaaggtt
     1801 ccgcggaagg gaatctccgg gtggcagtag gggatgagat ggccggcgat ggcgggccta
     1861 gatcgagtct cggtcttgca agccgagggc cttgctggag cggcgtagac tggaccccgg
     1921 aacccagtcg aggcattcag gctggggtga tggatgcctg ttggctggac tctcggacgg
     1981 aggatttccg ttgatgcaca ggacccaggc aatcacctac cggaggcggg cggatcggcg
     2041 tttgacggag gcctgagcat gcagacgtcc acgctgcgag ccgtcattga cagcgtccac
     2101 gccccggtgt tcgcggtgga ccgccagtac cgctacacca tcttcaaccg ggaccacgca
     2161 gctgcgatga aggcccttta tggcgtggac atccagatcg ggcgcagctt gctcgactgc
     2221 atgactgtgc cggaggaccg ggccgtggcc caggccaacc tggaccgggc tcttggtggc
     2281 gagcggttcg tcgaggaggc ttactcgggc gaggagcttc gatcccggca gtatttccag
     2341 atctcgcaca gcccgatccg gatggatggg ggcgagatca tcggcgtggc gatggtggcg
     2401 caggagatca ccgaacggag gcgggcggag gaagtgctgc gcgagagcga ggtcatgtac
     2461 cgctcgctgg tcaccgctat ggcggaaggt gtggtgctcc agggcgccac gggggagatc
     2521 accgcgatca atcctgcggc catgcggatc gagggacgaa gtcgcgagga tctcctgggg
     2581 cggcgctccg aagaccccgt gtgggacgcg gtgcgtggg
//
LOCUS       DATGWW010000213         1529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_425424, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000213 DATGWW010000000
VERSION     DATGWW010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425424"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VK150_03195"
     CDS             <1..219
                     /locus_tag="VK150_03195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30340.1"
                     /translation="ARPRREDGEARPRRTFGSAERPLGPRHEARDGRPTRAQAPGDRP
                     ARPRREGPSDRPTRKPAPRTGKPKPRKP"
     gene            241..723
                     /locus_tag="VK150_03200"
     CDS             241..723
                     /locus_tag="VK150_03200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30341.1"
                     /translation="MRAFAFCLLPCLLAAQGPGTAAEPGPSSGSAFATTLGTDPLAQI
                     RLTPPGCWDGLLLSGSLQPPKQGRREGSGATVEVWDLLPVETTRSAAFAVYLESLRKR
                     LSKALELPPPNHGTLELGDFMQSDPTQPQKLDLTKVKSMQERYNQLPPNGSPVKPGRP
                     "
     gene            complement(720..1028)
                     /locus_tag="VK150_03205"
     CDS             complement(720..1028)
                     /locus_tag="VK150_03205"
                     /inference="COORDINATES: protein motif:HMM:NF013494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HLP30342.1"
                     /translation="MSKDLVSPEAMEAFLARHPEWVALGDSHGLTLRRRYVFSAYPRG
                     LGFVVAAAEQAERVNHHPDLTLGYRWVVAVLTTHVSHGVTQRDLDLAEVLDLLYQEHL
                     "
     gene            1075..>1529
                     /locus_tag="VK150_03210"
     CDS             1075..>1529
                     /locus_tag="VK150_03210"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLP30343.1"
                     /translation="MPFDQSRPPLLGHVAFVTGSSRGIGRAIAVELGRWGADVVVHAQ
                     KNLALAESAAAEVRALGRRSIAMLGDVKVKADMEACADRVKAELGPVDILVNNAGTRR
                     DGPFILMGDEKWEEVMNVNLRGTVYATKAFVRGMMNRKWGRIVNIVSPTG"
BASE COUNT          233 a          594 c          490 g          212 t
ORIGIN      
        1 gcccggcccc gccgcgagga cggtgaggcc cggccccgcc gcaccttcgg gtccgctgag
       61 cgccccttgg gcccccgcca cgaagcccgt gatggccgtc caacccgggc ccaggcgccc
      121 ggcgatcgtc cggcccgccc ccgccgcgag ggcccctcgg accgccccac ccggaagccg
      181 gcgcccagga ccggcaagcc caagccccgg aaaccctgat cccaccgtca tccaggtccg
      241 atgcgagcct tcgccttctg cctgctcccc tgcctcctgg ccgcccaggg gcctgggacc
      301 gccgcggaac cgggcccgtc gtccggctcc gccttcgcca ccacgctggg caccgacccc
      361 ctcgcgcaga tccgcctgac gcctcccggc tgctgggatg gactcctcct gagcgggtcc
      421 ctccagcccc cgaaacaggg acgccgcgag ggatccggtg ccacggtgga ggtatgggat
      481 ctgctcccgg ttgagaccac ccgatccgcc gccttcgccg tctacctcga gagcctgagg
      541 aagcgcctct ccaaggccct ggagctgccg ccacccaacc acggcaccct cgaactgggc
      601 gacttcatgc agtcagatcc cacccagccc cagaagctcg acctcacgaa ggtgaagtcc
      661 atgcaggagc gctacaacca gcttccgccg aacggttctc cggtgaagcc cggccgaccc
      721 tagaggtgct cctggtagag gaggtccagc acctcggcca ggtcgaggtc ccgctgggtc
      781 acgccgtggc tcacatgggt ggtcagcacc gccaccaccc agcggtagcc cagggtcagg
      841 tcggggtggt ggttcacccg ctcggcctgc tcggccgcgg ccaccacgaa cccgaggccc
      901 cggggatagg cgctgaagac ataccggcgc cgcagggtga gcccgtgcga atcgcccagg
      961 gccacccact ccgggtgccg cgccaggaag gcctccatgg cctcgggact gaccagatcc
     1021 ttggacatgc tctcccccct ggggcatcct aatccgttgc cttcgagttg tgtcatgccc
     1081 ttcgaccagt cacgccctcc cctgctcggc catgtcgcct tcgtcaccgg ttcctcccgg
     1141 ggcatcgggc gggccatcgc cgtcgagctg ggccgctggg gggccgacgt ggtggtccac
     1201 gcccagaaga atctggcgct ggcggaatcc gccgccgccg aggtgcgggc cctcggccgg
     1261 cggtccatcg ccatgctggg agacgtgaag gtgaaggccg acatggaggc ctgcgccgac
     1321 cgcgtgaagg ccgagcttgg ccccgtggat atcctcgtga acaacgccgg cacccggcgc
     1381 gacggcccct tcatcctcat gggcgacgag aagtgggagg aggtcatgaa cgtgaacctc
     1441 cgcggcaccg tctacgccac caaggccttc gtgcgtggca tgatgaaccg caagtggggc
     1501 cgcatcgtca acatcgtgag ccccacggg
//
LOCUS       DATGWW010000214         1635 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_290012, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000214 DATGWW010000000
VERSION     DATGWW010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290012"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..436)
                     /locus_tag="VK150_03215"
     CDS             complement(<1..436)
                     /locus_tag="VK150_03215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30344.1"
                     /translation="MSRGLVVQILFVEEDASVWPRAEAFFARQLGLVGARMDLHLRSR
                     LPERAAGFDLVSLDGRGLVSALLERGDLLADLRATAIVNLHAETPGPLYGHLRCLLGR
                     HDEGARGDGLWVFPQSWMAPWFEESLEFPELGLAASTPPRKPS"
     gene            complement(522..782)
                     /locus_tag="VK150_03220"
     CDS             complement(522..782)
                     /locus_tag="VK150_03220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30345.1"
                     /translation="MSPTQDRPELTAAEWTLIQELRSLPDEALRSRMQTSMRELLFFF
                     RTPKCQGIGIEGFPCGDPRSSCEDCHQIWDMLDKVAERTRKG"
     gene            912..>1635
                     /locus_tag="VK150_03225"
     CDS             912..>1635
                     /locus_tag="VK150_03225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HLP30346.1"
                     /translation="MALVRPLAAAFAAAILCASLAAQTQVIQPAKAEKTTETRTVPLA
                     SGSTLKVKNVNGFVHVEAWDREEVQFTGEFKPSSKDEQVKVVLESGNHALEIRGEYPK
                     HNGWGHYQGPQCQMTLKVPRRVMPTVETVNGEVTLSGTQGKAVVNTVNGGIRVTSLDE
                     SLKAETVNGGIHLDKVKGSLTLQTVNGAIKGSALDGQGQGIKAETVNGSIHLQLGGMK
                     GRLKATTVNGGISFNAKGAEQVE"
BASE COUNT          303 a          551 c          562 g          219 t
ORIGIN      
        1 gggagggctt ccggggcggg gtgctggccg ccaggcccag ctcggggaac tccagggact
       61 cttcgaacca gggcgccatc caggactgcg ggaagaccca gaggccatcg ccacgagcgc
      121 cttcatcgtg gcggcccagg aggcagcgca ggtggccgta gagcggaccg ggggtctccg
      181 cgtgcaggtt gacgatggcc gtggcccgca ggtcggccag caggtcgccg cgctccagga
      241 gggcggagac gagcccccgg ccatccaggg agacgaggtc gaaccccgcg gcgcgctccg
      301 gcagacgcga gcgcaggtgc aggtccatgc gggcgcccac cagcccgagc tggcgcgcaa
      361 agaaggcctc ggccctgggc cagacggacg cgtcctcctc cacgaacagg atctgcacca
      421 ctaggccccg gctcatcgcg cccccaggaa aggccgtcgg gatcggccct ctccagccta
      481 gcgccgtttt cgggtgatgc cttgtttttc cgagtgggaa ttcagccctt ccgggtccgc
      541 tccgccacct tgtcgagcat gtcccagatc tggtggcagt cctcgcagga ggagcggggg
      601 tccccgcagg ggaagccctc gatgccgatg ccctggcact tgggggtgcg gaagaagaag
      661 aggagctccc gcatcgaggt ctgcatgcgg gaccggaggg cctcgtccgg caggctccgc
      721 agctcctgga tgagcgtcca ttccgcggcg gtcagttcgg gacggtcttg ggtcggcgac
      781 atggtggctc cgaagggctg agtatacaag cctccccgac ggggccgggg cccggggatt
      841 ggaaggggtc taaaccccct ccgaaaccct tcgtatccga cgcacgatct ctgacatcac
      901 aggaggattc catggccctc gtccgacctc tcgccgcggc cttcgccgcc gccatcctct
      961 gcgcctcgct cgcggcccag acccaggtga tccagcccgc caaggcggag aagaccaccg
     1021 agacccgcac cgtgcccctg gcctccggat ccaccctcaa ggtgaagaac gtgaacggct
     1081 tcgtccacgt ggaagcctgg gaccgggaag aggtccagtt cacgggcgaa ttcaagccca
     1141 gcagcaagga cgagcaggtg aaggtggtgc tcgagtcggg gaaccacgcc ctggagatcc
     1201 ggggcgagta ccccaagcac aacggctggg gccactacca gggcccccag tgccagatga
     1261 ccctcaaggt gccccgccgc gtgatgccca cggtggagac ggtgaacggg gaagtcaccc
     1321 tcagcggcac ccagggcaag gccgtggtca acaccgtcaa cggcgggatc cgcgtcacga
     1381 gcctcgatga gtccctgaaa gccgagaccg tgaatggcgg catccacctc gacaaggtga
     1441 agggtagcct cacccttcag accgtgaacg gggccatcaa gggatcggcc ctggatggac
     1501 agggccaggg catcaaggcc gaaacggtga acggctccat ccacctccag ctgggcggca
     1561 tgaagggacg gctcaaggcc accaccgtca acggcggcat ctccttcaac gccaagggcg
     1621 ccgagcaggt ggaag
//
LOCUS       DATGWW010000215         1989 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_290024, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000215 DATGWW010000000
VERSION     DATGWW010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290024"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            42..617
                     /locus_tag="VK150_03230"
     CDS             42..617
                     /locus_tag="VK150_03230"
                     /inference="COORDINATES: protein motif:HMM:NF013426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HLP30347.1"
                     /translation="MNHPQPPETSNEPLAPGQRLPESERKELSPEAIAEIHAIMAKFP
                     DKLAATLPALHIAQREFGFVSLSAMRAVAKAIGIPEGHVFGVATFYTMYQKAPVGKYH
                     FSVCTNISCALRGAAQLLEKVCEKTGVKPGQGPSPDGMWSVEEVECLAGCGVAPCIQV
                     NHDVYDELVDEQKLVEVMEACKRGEYRPWAQ"
     gene            629..>1989
                     /gene="nuoF"
                     /locus_tag="VK150_03235"
     CDS             629..>1989
                     /gene="nuoF"
                     /locus_tag="VK150_03235"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HLP30348.1"
                     /translation="MAAIRTKRDPHTYTFPGFGSEKFPNLMLRGAGDLNNWHLKVYEQ
                     QHEGYVAMKQALKMEPVAVTEEVKTSGIRGRGGAGFPAGLKWSFMPKDTPERKLTRYL
                     VCNGDEGEPGTFKDRVILEYNPHQLIEGMIIGGWAMQCAMGYVYIRGEFLWLIEKLEA
                     ALQEARDAGYLGKNILGTGWDYDILVNRGAGAYICGEETALLNSLEGRRGEPRVKPPF
                     PAAKGAFGQPTTVNNVETLAAVPPIIRMGGAEYAKIGTPKNTGTRIFGVSGHVKRPGI
                     YELPLGTPMNFLVEELAGGSSTGKKIKAIIPGGASAPMFDDKDFDCPLDFDTVKARGS
                     MAGSGGLIVMDEDTCIVQATLRLIKFYAHESCGQCTPCREGCNWMEMILHRIEHGEGR
                     MEDLDLLANLTPRISMRTLCPLGDAACGPMDSALQKFRHEFEHHITHKTCYTSGSRLL
                     SKVG"
BASE COUNT          376 a          686 c          631 g          296 t
ORIGIN      
        1 gtcgtctttg ggctaaactg agccttcatg cgagtgcgcc catgaatcac ccccagcccc
       61 ccgagacgtc gaacgaaccc ctggcccccg gccagcggct gccggaatcc gagcgcaagg
      121 agttgagccc ggaagccatc gcggagatcc acgccatcat ggcgaaattt cccgacaagc
      181 tggcggccac gctgcccgcc ctgcacatcg cccagcggga gttcggcttc gtgagtctct
      241 cggccatgcg cgccgtggcg aaggccatcg gtatccccga ggggcatgtg ttcggcgtgg
      301 ccaccttcta cacgatgtac cagaaggccc cggtgggtaa gtaccacttc tcggtgtgca
      361 ccaacatcag ctgtgccctg cgcggcgccg cccagctgct ggagaaggtc tgcgagaaga
      421 ccggcgtgaa gcccggccag ggccccagcc ccgacggcat gtggagcgtg gaggaagtgg
      481 agtgcctggc cggctgcggc gtggcgccct gcatccaggt gaaccacgat gtctacgacg
      541 agctggtgga tgaacagaag ctcgtggaag tgatggaagc ctgcaagcgc ggtgagtacc
      601 gcccttgggc tcagtgaggg ggaagacgat ggccgccatc cgcaccaagc gcgatcccca
      661 cacctacacg ttccccggct tcggttcgga gaagttcccg aacctcatgc tccgcggcgc
      721 gggcgatctg aacaactggc acctcaaggt ctacgagcag cagcacgaag gctacgtggc
      781 catgaagcag gccctgaaga tggagcccgt ggcggtgacc gaagaggtga agacctcggg
      841 catccgcggc cgcggcggcg cgggcttccc ggcgggcctc aagtggtcct tcatgcccaa
      901 ggacacgccg gagcgcaagc tcacccgcta cctggtctgc aacggcgacg agggcgagcc
      961 cggcaccttc aaggaccgcg tcatcctgga gtacaacccc caccagctca tcgagggcat
     1021 gatcatcggc ggctgggcca tgcagtgcgc catgggctat gtctacatcc gcggcgagtt
     1081 cctctggctc atcgagaagc tggaagcggc gctccaggaa gcccgcgacg ccggctacct
     1141 cggcaagaac atcctgggta ccggctggga ctacgacatc ctggtcaacc ggggcgccgg
     1201 cgcctacatc tgtggcgagg aaacggccct gctgaactcg ctggaaggcc gccgcggcga
     1261 gccccgcgtg aagccgccct tcccggcggc caagggtgcc tttggccagc ccaccaccgt
     1321 gaacaacgtg gagacgcttg ccgccgtgcc ccccatcatc cgcatgggcg gcgccgagta
     1381 cgccaagatc ggcacaccga aaaacacggg cacccgcatc ttcggcgtca gcggtcacgt
     1441 gaagcggccc ggcatctacg agctgcccct cggcaccccc atgaacttcc tggtggaaga
     1501 actggccggc ggttccagca ccggcaagaa gatcaaggcc atcatccccg gcggcgccag
     1561 cgcccccatg tttgatgaca aggatttcga ctgccccctg gacttcgaca cggtgaaggc
     1621 gcggggctcc atggcgggtt cgggcggtct catcgtcatg gacgaggaca cctgcatcgt
     1681 gcaggccacc ctgcggctca tcaagttcta cgcccacgag agctgcggcc agtgcacgcc
     1741 ctgccgcgaa ggctgcaact ggatggagat gatcctccac cgcatcgagc acggcgaagg
     1801 acgcatggag gacctcgacc tgctggcgaa cctcacgccg cgcatcagca tgcggaccct
     1861 ctgccccctg ggcgacgccg cctgcggccc catggattcc gcgctccaga agttccgcca
     1921 cgagttcgag catcacatca cccacaagac ttgctacacc agcgggtcgc gcctgctctc
     1981 caaggtcgg
//
LOCUS       DATGWW010000216         2833 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_290028, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000216 DATGWW010000000
VERSION     DATGWW010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2833
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290028"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..476
                     /locus_tag="VK150_03240"
     CDS             <1..476
                     /locus_tag="VK150_03240"
                     /inference="COORDINATES: protein motif:HMM:NF020839.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MerR family DNA-binding protein"
                     /protein_id="HLP30349.1"
                     /translation="RYSEADAARLEAICTYRRAGVPLDAIGALLAHPDRLAATLQAHL
                     ADLDCQMADLRAQQRVTVGLLRNPDLLEGLQAMDKATWVTLLRASGFTDADMDRWHGT
                     FERTAPDRHQRFLAFLGLSPEEITGLRARASASGHPSAPVDGTGSASPPSSPAER"
     gene            complement(376..804)
                     /locus_tag="VK150_03245"
     CDS             complement(376..804)
                     /locus_tag="VK150_03245"
                     /inference="COORDINATES: protein motif:HMM:NF014119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HLP30350.1"
                     /translation="MFSFLFSWATRMTGSRRGEAARRLGLRAERLTLWLLWLRGWDLV
                     AWRQKLGRWELDLLLCRGPDLRLLEVKARRPGAWVGADIALTPEQRLRLQGALRRWLD
                     RVPWPGQVTFQRVSWAGWRCRFHPPERWDALTLRPGPGAP"
     gene            complement(931..1500)
                     /locus_tag="VK150_03250"
     CDS             complement(931..1500)
                     /locus_tag="VK150_03250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30351.1"
                     /translation="MDLTRFLELVRTQGWQGWSLWAVLLAQALLWVGLVRLHLSLQRE
                     ETPWEECVGKIRSAFLRKVNGDEEIQELKVHRYAPLVDQLLALHFAEEKTDRFDRWLL
                     MRWKVKEGLRPYWIRWGYLLIAFGVVVWYLQGLRLDLGTDMLKRTPVDPRLLWVWLGY
                     AMILAWKIVRLHGNLERVQRSLLLPRRDE"
     gene            1623..1796
                     /locus_tag="VK150_03255"
     CDS             1623..1796
                     /locus_tag="VK150_03255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30352.1"
                     /translation="MTADGLKTAANWAKDLGVPEKKLKDALKAAGIEPDAKKGVCAYY
                     SQASAEKAKKAIK"
     gene            complement(1800..2438)
                     /locus_tag="VK150_03260"
     CDS             complement(1800..2438)
                     /locus_tag="VK150_03260"
                     /inference="COORDINATES: protein motif:HMM:NF013122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HLP30353.1"
                     /translation="MTQSPLLESGSSALRELRFAVLDLETTGGSPKARWGKDGRFLQP
                     SEITEVGVVRLSGLVVEDRWSSLAAIQGFLPEEIQRLTGISLPMLAGAPPWEQVALKL
                     APKLEGRIWVAHHAPYDGSFLKAWLPEGVWRRHRLICTRLLAKKLIPELPRRSLAELC
                     EFLGITNTRAHRALQDAEATAEALQHLLRRAEDQGLDGEAFLAAGEVPWSKV"
     gene            complement(2435..>2833)
                     /locus_tag="VK150_03265"
     CDS             complement(2435..>2833)
                     /locus_tag="VK150_03265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30354.1"
                     /translation="QDVDAPCGRCGGETRHQVLTVTNGIPDKLICGNCRSVHKFRAAK
                     PEPLPRTPRIAAAAKAGGPRPGSLVNQFQQALAQEQGGAKARPYNVAERWEEGAWMDH
                     PTFGLGRIQRKVGKKVDVLFRDGLKTLVSA"
BASE COUNT          450 a          992 c          994 g          397 t
ORIGIN      
        1 gccgctacag cgaggcggac gctgcccgcc tcgaggcgat ctgcacctac cggagggccg
       61 gggtccccct ggacgccatc ggcgccctcc tcgcccaccc ggatcggctc gcggccacct
      121 tgcaggcgca cctggcggac ctggattgcc agatggccga cctgcgggcc cagcagcggg
      181 tgaccgtggg cctgctgcgg aacccggacc tcctggaagg cctgcaggcg atggacaagg
      241 ccacctgggt gaccctgctc cgggcctcgg ggttcacgga cgccgacatg gaccgctggc
      301 acgggacttt cgagcggacc gccccggacc ggcaccagcg cttcctggcc ttcctgggcc
      361 tttcgccgga ggagatcacg gggctccggg cccgggcctc agcgtcaggg catcccagcg
      421 ctccggtgga tggaaccggc agcgccagcc cgcccagctc acccgctgaa aggtgacctg
      481 gccgggccag ggaacccggt ccagccagcg ccgcagcgcc ccttggaggc ggaggcgctg
      541 ctcaggcgtc agggcgatgt ccgcccccac ccaggcgccg ggccgccggg ccttcacctc
      601 cagcaggcgc aggtccgggc cccggcacag gagcagatcc agctcccagc ggcccagctt
      661 ctgacgccag gcgaccaagt cccagccccg cagccagagc agccagaggg tcaggcgctc
      721 ggcccgaagg cccagccgcc gggcggcttc accgcgtctc gaacccgtca tgcgagtggc
      781 ccatgagaag aggaaactga acaccaccaa ggcaccagat acggttttgt ctcgcgtatc
      841 cgccacgcgg ataccgagaa gacaccaaga aaagccaatg cccttgttcc agttcttggt
      901 ggttcgtctt tccacctgaa gttgtgggat ctattcgtcg cgcctcggca gcagcaggct
      961 gcgctgcacg cgttcgaggt tcccgtggag gcggacgatc ttccaggcga ggatcatggc
     1021 gtagcccagc cagacccaca gcaggcgggg atccaccggg gtgcgcttca gcatgtcggt
     1081 acccaggtcc aggcgcaggc cctgcaggta ccacaccacc accccgaagg cgatgagcag
     1141 gtagccccag cggatccagt agggccgcag gccctccttc accttccagc gcatgagcag
     1201 ccaacggtcg aagcggtcgg tcttctcttc ggcgaagtgc agggccagca gctggtccac
     1261 cagcggggcg tagcggtgca ctttcagttc ctggatctcc tcgtcgccgt tcaccttgcg
     1321 gaggaaggcc gaccggatct tcccgacgca ctcctcccaa ggtgtctcct cccgctgcag
     1381 cgagaggtgc aggcgcacca ggcctaccca caggagggcc tgggccagca gcaccgccca
     1441 cagggaccag ccctgccagc cctgggtgcg gacgagttcg aggaagcggg tgagatccat
     1501 gggggtagct tagcggatgc gggcggcccg gcccggactc cggggcgaac tgcaccgccc
     1561 ataggcaaac cggaccgccg tcaccggggc cggggtgtag gctggccccc acggagggtg
     1621 ccatgacggc tgatggcctg aagacggcgg cgaactgggc gaaggacctg ggggtgcccg
     1681 agaagaagct gaaggacgcg ctgaaggccg cgggcatcga gcccgacgcg aagaagggcg
     1741 tgtgcgccta ctactcccag gcctccgccg agaaggcgaa gaaggccatc aagtaggccc
     1801 tagaccttgc tccagggcac ctcgccggcg gcgaggaagg cctccccgtc caggccttgg
     1861 tcctccgccc gcctgaggag gtgctgcagg gcctcggcgg tggcctcggc atcctgaagg
     1921 gcgcgatggg cgcgggtgtt ggtgatgccg aggaattcgc agagctcggc gaggctgcgc
     1981 cggggcagct ccggaatgag cttcttggcc agcaggcgcg tgcagatgag ccggtggcgc
     2041 cgccagacgc cctcgggcag ccaggccttg aggaagctgc cgtcgtaggg cgcgtggtgg
     2101 gccacccaga tgcggccttc cagcttcggc gccagcttca gggccacctg ctcccagggc
     2161 ggcgcgccgg ccagcatggg caggctgatg cccgtgagcc gctggatctc ctcgggcagg
     2221 aagccctgga tggcggccag gctcgaccag cggtcctcca ccaccaggcc cgacaggcgc
     2281 accacgccga cttccgtgat ctccgacggc tggaggaagc gcccatcctt gccccagcgg
     2341 gccttggggc tgccgccggt ggtctccagg tcgagcaccg cgaaccgcaa ctcccgcagg
     2401 gcggaggagc cggattcgag gagcggcgac tgggtcatgc gctgaccagg gtcttcaggc
     2461 cgtcccggaa cagcacgtcc accttcttgc cgaccttccg ctggatgcgg cccaggccga
     2521 aggtggggtg gtccatccag gccccctctt cccagcgttc ggccacgttg tagggtctgg
     2581 ccttggcgcc gccctgctcc tgggccagcg cctgctggaa ctggttgacc agcgagccag
     2641 gtcggggccc gccagccttc gcggccgcgg cgatgcgggg agtacggggc aggggctcgg
     2701 gcttggccgc gcggaacttg tgtacagagc ggcagttgcc gcagatgagc ttgtcgggga
     2761 tgccgttggt gaccgtcagc acctggtgcc gggtctctcc gccgcagcgc ccgcagggcg
     2821 cgtccacatc ctg
//
LOCUS       DATGWW010000217         3383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_63352, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000217 DATGWW010000000
VERSION     DATGWW010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3383
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63352"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..472)
                     /locus_tag="VK150_03270"
     CDS             complement(<1..472)
                     /locus_tag="VK150_03270"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLP30355.1"
                     /translation="MTDAPLIRLTNITKIYQMGDMEVRALDGVSLEISRGEYVAIMGP
                     SGSGKSTMMNVIGCLDTPTSGTYELNGKLASAMTDDDLAQIRNEEIGFVFQTFNLLAR
                     TTSLQNVELPLIYAGKTPAQRHEMAHKALENVGLGTRADHMPNQLSGGQRQRVAI"
     gene            606..3236
                     /locus_tag="VK150_03275"
     CDS             606..3236
                     /locus_tag="VK150_03275"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLP30356.1"
                     /translation="MMSSLIRSLGRPLLRLRYRIHLEGLDAVSPGEGPGILFLATHPT
                     LVDPFLLISELHPRFAPTLVAGRDHAAPAPLRWLARLLGARALPDPINHGDHCREALH
                     AEVMALAAALAAGRNLLLFPGGRLARQKTEDLADNSVVEAILRQAPGARVVVVRLHGL
                     WGSRFSAASGWRPALGRELLRSLGYLFANAIFFMPRREVQVRAEEVHDLPIGQGRPVF
                     NRALEAHLNREASPRTHVPYLVWKDHAPRTLPEPPRPRVEGNPRAVPPQVKDAVRRHL
                     QSVTGVADIQDTQSLVLDLGLDALAHRELELWVERAYGYACSDPASLQTVSDLFLAAT
                     GAAVSLRQGELKAVPHAWFHSRTDLPIEMPEGDTIPEVFLRQARRDPRRVVLADQTGG
                     VKSYRDVLTAVLVLKPLFETLEGTHVGLMLPASGGASIIYLALLFAGKTPVLVNWTAG
                     ARSMAYGLDLVGVKHVITVSTLINRLDAQGVDLSTVKGRLLLLDEAGKKITLATKLAA
                     AFRARFNWAPLLAARPPETAAVLFTSGSESHPKAVPLSHGNILTNIRDATQALNFRQD
                     ERVMGCLPPFHAFGLTTTTILPMLVGLRVVYHPNPTEGRMLARIIEAYHATLLVGTPT
                     FLGGILRMAEDRHLESLRIVVSGAEKCPEQVYATLARRWPKTTVLEGYGITECSPVVS
                     VNREDDPRTGTIGKPLLSVEWAIVDLDTGRRVEPGQPGMLLVRGPSVFSGYLNPDVDS
                     PFETFEGRPWYRTGDLVCQDRGVLVFSGRLKRFVKLGGEMVSLPAIEEALSQRFQGED
                     ETEPLLAVEASPEELNPDLILFSVAGIARDEANAAIRAAGLSTLHNIRVVRRIDHIPT
                     LGTGKTDYRALKAMLAETPV"
BASE COUNT          488 a         1233 c         1116 g          546 t
ORIGIN      
        1 cgatggccac gcgctggcgc tggccgccgg acagctggtt gggcatgtgg tcagctcggg
       61 tgccgaggcc gacgttctcc agggccttgt gcgccatctc gtggcgctgg gcaggggtct
      121 tgcccgcgta gatcaggggc agctccacgt tctgcagcga ggtggtgcgg gcgagcaggt
      181 tgaaggtctg gaagacgaag ccgatctcct cgttgcggat ctgggccaga tcgtcatcgg
      241 tcatggccga ggccagcttg ccattcagct cgtaggtgcc gctggtggga gtgtccaggc
      301 agccgatgac gttcatcatc gtggacttgc ccgagcccga ggggcccatg atggccacgt
      361 actcacctcg gctgatctcc agggacacgc cgtcgagggc ccgcacctcc atgtcgccca
      421 tctgatagat cttggtgatg ttggtgagcc ggatcagggg agcatcggtc atggaagcct
      481 cgcgggaccc cccgcggggc ctgttccatc ttcgcagatg tggccggggc ggtttagggc
      541 cgggcgtcga ttcccgctac aatcctccat ccgtccgtgt cccggcaagc aggtcctgat
      601 tcccgatgat gtcatccctg atccgatccc tgggtcggcc gctcctgcgg ctgcgctacc
      661 gaatccacct cgaggggttg gacgccgtat cccctggtga gggtccgggc atcctctttc
      721 tggccaccca tcccaccctg gtggatccct tcctcctgat ctcggagctg catccgcggt
      781 tcgcgcccac cctggtggca ggccgggatc acgccgcccc ggctcccctc cgctggctgg
      841 cgcggttgct gggtgccagg gccctgccgg atccgatcaa ccacggggat cactgccgcg
      901 aagccctcca cgccgaagtg atggccctgg ccgccgcgct cgccgcgggc cggaacctgc
      961 tgctgttccc cgggggccgc ctggcgcgcc agaagaccga ggatctcgcc gacaacagcg
     1021 tggtggaagc catcctccgg caggccccgg gagcgcgggt ggtggtggtc cggctccacg
     1081 gcctctgggg cagccggttc agcgcggcgt ccggctggcg gccagcgctg ggacgggagc
     1141 tgctccggag cctgggctac ctcttcgcca acgcgatctt cttcatgccc cggcgcgagg
     1201 tgcaggtgcg ggccgaggaa gttcacgacc tgcccatcgg ccaggggcgc ccggtgttca
     1261 accgcgctct tgaggcgcac ctgaaccggg aagcctcgcc caggacccac gttccctacc
     1321 tcgtgtggaa ggaccatgca ccccgcacgc tgcctgagcc gccgcggccc cgggtggagg
     1381 gcaatccccg cgccgtgccg ccccaggtga aggacgcggt gcgtcgccac ctccagtccg
     1441 tgaccggagt ggcggatatc caggacacac agtccctggt gctcgacctc ggcctggacg
     1501 cgctggccca tcgggaactg gaactctggg tcgagcgggc ctatggctat gcctgcagcg
     1561 atcccgcctc cctccagacc gtctctgacc tgttcctggc cgccaccggc gccgcggtgt
     1621 ccctgcgcca gggcgaactg aaagccgtgc cccacgcctg gttccattcc cggactgact
     1681 tgcccatcga gatgcccgag ggggacacga tccccgaggt cttcctgcgc caggcccgcc
     1741 gcgatccgcg ccgcgtggtg ctggcggacc agaccggcgg cgtgaagtcc taccgcgatg
     1801 tgctcacggc cgtcctggtg ctgaagcccc tgttcgagac cctggaaggt acccacgtgg
     1861 ggctgatgct gcccgcgtca ggcggggcca gcatcatcta tctggctctg ctcttcgccg
     1921 gcaagacgcc cgtgctggtg aactggaccg ccggggcccg cagcatggcg tacggcctgg
     1981 atctggtggg ggtgaagcac gtcatcaccg tgtccacgct gatcaaccgc ctggacgccc
     2041 agggggtgga cctctccacc gtgaagggcc gtctgctgct cctcgacgag gccggcaaga
     2101 agatcaccct cgccacgaag ctggcggcgg ccttccgggc ccggttcaac tgggcgccgc
     2161 tcctggcggc cagaccgccc gaaacggcgg cggtgctctt caccagcggc agcgaaagcc
     2221 atccgaaggc ggtgcccctc agccacggca acatcctcac gaacatccgg gacgccaccc
     2281 aggccctgaa cttccgccag gacgagcggg tcatgggctg cctgccgccc ttccacgcct
     2341 tcggcctgac caccaccacc atcctgccga tgctggtggg cctgcgcgtg gtctaccacc
     2401 ccaaccccac cgaaggccgc atgctggccc gcatcatcga ggcctaccac gccaccctgc
     2461 tggtgggcac gcccaccttc ctgggcggca tcctccgcat ggccgaggac cgccacctgg
     2521 agtcgctgcg catcgtcgtc tccggcgccg agaagtgccc cgagcaggtc tacgccacgc
     2581 tggcccgccg gtggccgaag accaccgtgc tggaaggcta cggcatcacc gagtgctcac
     2641 cggtggtctc ggtcaaccgc gaggacgacc cgcgcaccgg aaccatcggc aagcccctgc
     2701 tctccgtgga atgggccatt gtcgacctgg acacgggccg ccgcgtggag ccaggccagc
     2761 cggggatgct gctggtgcgc ggccccagcg tgttctcggg ctacctcaat ccggacgtgg
     2821 attctccatt tgagaccttc gagggccgcc cgtggtaccg caccggcgac ttggtctgcc
     2881 aggaccgcgg cgtgctcgtg ttctctggcc gcctcaagcg gttcgtgaag ctgggcggcg
     2941 agatggtctc cctgccggcc attgaggagg ccctgtcgca gcgcttccag ggcgaagacg
     3001 agaccgagcc cctgctggcc gttgaagcct ccccggaaga actcaacccc gacctcatcc
     3061 tcttctccgt ggcaggcatc gcccgcgatg aggccaacgc ggccatccgc gcggcgggcc
     3121 tatccaccct gcacaacatc cgggtggtcc gccgcatcga ccacatcccc accctcggca
     3181 ccggcaagac cgactaccgc gcgctcaagg ccatgctggc cgagaccccc gtctaggatt
     3241 ccgcctcgat cagcagggcc aggcccaggc cgccgccgat gcccagggtg gccacgccca
     3301 ggccaccgcc ccgctggcgc agctggtgcg cgagggtgca gacgatgcgt gcccccgtgg
     3361 cgccgatggg gtgtccgagg gcc
//
LOCUS       DATGWW010000218         1758 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_290172, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000218 DATGWW010000000
VERSION     DATGWW010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290172"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..503
                     /locus_tag="VK150_03280"
     CDS             <1..503
                     /locus_tag="VK150_03280"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HLP30357.1"
                     /translation="EGLAKLKPAFRKDGTVTAGNASGINDGSAALVLVTEAAAKAHRP
                     IARILGFAQAGVDPATMGLGPVPAIQKLLKKTGVKLSDIDLFELNEAFAAQSLGVLAE
                     LPDLDPAKVNLRGGAIAIGHPIGASGARILVTLLHLLQDENKRLGVAALCVGGGQGVA
                     MLVERL"
     gene            544..1230
                     /gene="ftsE"
                     /locus_tag="VK150_03285"
     CDS             544..1230
                     /gene="ftsE"
                     /locus_tag="VK150_03285"
                     /inference="COORDINATES: protein motif:HMM:TIGR02673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HLP30358.1"
                     /translation="MITLTHVGKQYDRIHTALADVSFAIDSGEFVFLTGPSGAGKSTL
                     LKLLFREQVPSSGEIQLAGHRLASMAENEIPLLRRKLGVVFQDFKLIRTRTIFENVAF
                     VLKVLGVSAAEQKQRTFRALKMVGLQHKLSSYPLQLSGGEQQRVAIARALVNDPLVLL
                     ADEPTGNLDPDLAQEIMALFERINGQGTTVVVATHDRSLIQRMKKRVIGLDHGRIAFD
                     QPAPTSLVTV"
     gene            1319..>1758
                     /gene="yihA"
                     /locus_tag="VK150_03290"
     CDS             1319..>1758
                     /gene="yihA"
                     /locus_tag="VK150_03290"
                     /inference="COORDINATES: protein motif:HMM:TIGR03598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HLP30359.1"
                     /translation="MAQPLTDARFVTSAADARKLGVCHAEVAFVGRSNVGKSSLLNAL
                     ANQKQLARVSKTPGRTRLINVFLTGPDRWIVDLPGYGFATGPAAERATWQAMIEGYLT
                     GRPTLRMVFVLVDAEVGPTKLDHQMIEWLRAEGLPLRVVATKAD"
BASE COUNT          291 a          625 c          578 g          264 t
ORIGIN      
        1 tggagggcct ggccaagctc aagcccgcct tccgcaagga cggcactgtg accgccggga
       61 acgccagcgg catcaatgac ggttccgccg ccctggtgct ggtcacggag gcggcggcga
      121 aggcccaccg gcccatcgcc cgcatcctcg gcttcgccca ggcgggcgtg gatcccgcca
      181 ccatgggcct cggccccgtg ccagccatcc agaagctgct gaagaagacc ggcgtgaagc
      241 tctccgacat cgacctcttc gagctgaacg aggccttcgc cgcccagagc ctgggtgtgc
      301 tggcggagct gcccgatctc gacccggcca aggtcaacct gcggggcggc gccatcgcca
      361 tcggccatcc aatcggcgcc agcggcgccc gcatcctcgt caccctgctg cacctgctgc
      421 aggacgagaa caagcgcctg ggcgtcgccg ccctctgcgt gggcggcggg cagggcgtgg
      481 ccatgctggt ggaaaggctc tgatgaggcc atccgcgcca tctgcggtta aattcggatt
      541 gcgatgatca ccctcaccca tgtcggcaag cagtacgacc gcatccacac cgccctggcg
      601 gacgtgagct tcgccattga ctcgggcgag ttcgtgttcc tcacgggacc cagcggcgcg
      661 gggaagtcca cgctgctgaa gctcctcttc cgcgagcagg tgcccagcag cggggagatt
      721 cagctggcgg gacaccgcct ggcctccatg gcggaaaacg agatcccgct gctgcgccgc
      781 aagctgggcg tggtgttcca ggatttcaag ctgatccgca cccgcaccat cttcgagaac
      841 gtggccttcg tcctgaaagt gctgggcgtg agcgccgccg agcagaagca gcgcaccttc
      901 cgggcgctga agatggtggg gctccagcac aagctgagca gctacccctt gcagctgtcg
      961 ggcggcgagc agcagcgcgt ggccatcgcc cgggccctgg tgaacgatcc gctggtgctg
     1021 ctggcggacg agcccaccgg caacctggac cccgatctgg cccaggagat catggcgctg
     1081 ttcgagcgca tcaacgggca gggcaccacc gtggtcgtcg ccacccatga ccgcagcctc
     1141 atccagcgca tgaagaagcg cgtcatcggc ctcgatcacg gccgcatcgc cttcgaccag
     1201 cccgcgccga ccagcctggt gacggtctga aagaaggatg gagaccgggc tccggccagc
     1261 ctggaagggc gctaatctag agcctgcctc gaccttggtc gtagccaccc gaggtcccat
     1321 ggcccagccc ctcaccgatg cccgtttcgt cacctccgcg gccgacgcca ggaagctcgg
     1381 cgtctgccat gccgaggtgg ccttcgtggg gcgcagcaac gtgggcaagt cgtcattgct
     1441 caacgcgctg gccaaccaga agcagctggc ccgcgtctcg aagacgccgg gccgcacgcg
     1501 gctcatcaac gtgttcctca cgggccccga ccgctggatc gtggaccttc ccggctacgg
     1561 cttcgccaca ggcccggccg cggagcgggc cacctggcag gccatgatcg agggctacct
     1621 cacgggccgc ccgaccctgc gcatggtctt cgtgctggtg gatgcggagg tgggtcccac
     1681 gaagctcgac caccagatga tcgagtggct gcgcgccgag ggcctgccct tgcgcgtggt
     1741 ggccaccaag gccgacca
//
LOCUS       DATGWW010000219         2001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_190082, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000219 DATGWW010000000
VERSION     DATGWW010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190082"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(22..207)
                     /locus_tag="VK150_03295"
     CDS             complement(22..207)
                     /locus_tag="VK150_03295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30360.1"
                     /translation="MARKPNYNFEKRQKDLARQKKKEEKLQKKAMKKDALGNDIPGTE
                     EDGGTEETAETGTPDSE"
     gene            complement(259..750)
                     /locus_tag="VK150_03300"
     CDS             complement(259..750)
                     /locus_tag="VK150_03300"
                     /inference="COORDINATES: protein motif:HMM:NF001095.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HLP30361.1"
                     /translation="MSEGLASPPLRIFVDADACPVKEEIFRVATRCGLRVLLVSNSPL
                     RVPRNPLFESVVVAKGQFDGADDWIVEQIGATDIAVTSDIPLAARCLEKGARALDPKG
                     RVYSPDSIGDALATRELMTHLRAMGAEGELGGGPPPFTARDRSTFLQRLDDLIQALRR
                     SRR"
     gene            complement(747..1280)
                     /locus_tag="VK150_03305"
     CDS             complement(747..1280)
                     /locus_tag="VK150_03305"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HLP30362.1"
                     /translation="MRVLALSGSLRPQSLNTLLLHEAARLAPEGMEIRLWEGLDDLPH
                     FSPERDVEPPPPAVAELRAKISEADAVVVCTPEYIHAMPAVLKNLLEWVVSSGAWVDK
                     PTAAWSASPSLEGGARAHGSLVHTLEVMSARVVAEASCCLTLAHSGLDEAGHLKDPVQ
                     VGRLQTALAALAAAQTP"
     gene            complement(1284..1508)
                     /locus_tag="VK150_03310"
     CDS             complement(1284..1508)
                     /locus_tag="VK150_03310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30363.1"
                     /translation="MAARPAGAWLGLLLVTLGAASLAWPEFSCTRDTHDAKLGPLEFT
                     LKEKETVRLPIWPGLLAVAVGAGLLWRRRG"
     gene            complement(1508..1894)
                     /locus_tag="VK150_03315"
     CDS             complement(1508..1894)
                     /locus_tag="VK150_03315"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HLP30364.1"
                     /translation="MKRLAKYSDQVYALLRIVSGLLFAFHGAGKVFGLLADHQPAVGS
                     QIWIGGVIELVGGLAILLGFQTRLAAFICSGMMAVAYTQFHWKFQFGAKFWPIANMGE
                     MAVLYCFLFLFVATRGGVTWCLDKDA"
BASE COUNT          301 a          671 c          738 g          291 t
ORIGIN      
        1 aggcggcgca cgacgctgac gctactcgga atccggggtg ccggtctcgg cggtctcttc
       61 ggtgccgcca tcttcctcgg tgcccgggat gtcgttgccc agggcgtcct tcttcatggc
      121 cttcttctgg agcttctctt ccttcttttt ctggcgggcg aggtccttct ggcgcttctc
      181 gaagttgtag ttgggctttc tggccatggg gaatccgatc acgaaaaggg ttgaagccga
      241 tgaagccctt ttcccagtct accgcctcga ccgccgcagc gcctggatca ggtcgtcgag
      301 ccgctgcaga aaggtggagc ggtcccgcgc ggtgaagggc ggcgggcccc cgcccagctc
      361 gccctcggcg cccatggccc gcaggtgcgt catcagctcg cgggtggcca gggcgtcgcc
      421 gatggaatcc ggcgaataga cccggccctt gggatccagc gcccgggcgc ccttctcaag
      481 gcaccgggcg gccaggggga tgtccgaagt cacggcgatg tccgtggcgc cgatctgctc
      541 gacgatccag tcgtcggcgc cgtcgaactg gcccttggcc accaccaccg actcgaagag
      601 ggggtttctc ggcacccgca ggggcgagtt ggagacgagc agcacccgca ggccgcagcg
      661 ggtggccacg cggaagatct cctccttcac ggggcaggcg tcggcatcca cgaagatgcg
      721 gaggggcggg gaggccaggc cctcgctcac ggtgtctggg ccgcggccag ggcggccagg
      781 gccgtctgga ggcgtcccac ctggaccggg tccttcaggt gccccgcctc gtcgaggccc
      841 gagtgggcca gggtgaggca gcaggaggcc tcggccacca cccgggccga catcacttcg
      901 agggtgtgga ccagcgaccc gtgggcccgg gcgccccctt ccagcgaggg cgaggcgctc
      961 caggcggcgg tgggcttgtc cacccaggcc ccggaggaca ccacccactc cagcaggttc
     1021 ttcagcaccg cgggcatggc gtggatgtac tccggcgtgc agaccaccac ggcgtccgcc
     1081 tcgctgatct tcgcccgcag ctcggcgacg gccgggggcg gcggctccac gtcccgctcg
     1141 gggctgaagt ggggcaggtc gtcgaggccc tcccacaggc ggatctccat gccctcgggg
     1201 gccaggcggg cggcttcgtg gagcagcagc gtgttgagcg actggggccg caggctgccg
     1261 gagagggcga ggacgcgcac ggctcaaccc ctccggcgcc agagcaggcc cgcgcccacg
     1321 gccacggcga ggaggccggg ccagatgggc aggcgcacgg tctccttctc cttcagcgtg
     1381 aattccagcg ggcccagctt ggcgtcgtgg gtgtcgcggg tgcagctgaa ctccggccag
     1441 gccagggagg ccgcgcccag ggtgacgagg agcagaccga gccaggcgcc ggcgggacgg
     1501 gcggccatca ggcgtccttg tccaggcacc aggtcacgcc cccgcgggtg gccacgaaga
     1561 ggaacaggaa gcagtagagc accgccattt cccccatgtt cgcgatgggc cagaacttgg
     1621 cgccgaactg gaacttccag tggaactggg tgtaggccac ggccatcatg ccgctgcaga
     1681 tgaacgccgc caggcgggtc tggaagccca gcaggatggc caggccgccc accagctcga
     1741 tgacgccgcc gatccagatc tgggagccca ccgcgggctg gtggtcggcc agcaggccga
     1801 agaccttgcc ggcgccgtgg aaggcgaaca gcaggcccga gacgatgcgc agcagcgcgt
     1861 agacctggtc cgagtacttg gcgagccgct tcatggggaa cctccgggga tggtgtgatg
     1921 acattctgac cgggtcgccg atgagagagg ccggcctggg gcaaggcgag gcggggaggg
     1981 gtggcgcccg ggctagccct t
//
LOCUS       DATGWW010000220         1914 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_425604, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000220 DATGWW010000000
VERSION     DATGWW010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425604"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1659
                     /locus_tag="VK150_03320"
     CDS             <1..1659
                     /locus_tag="VK150_03320"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HLP30365.1"
                     /translation="AVERFSRHHDELSLQGDSRPSLETHYRDLIPLGMPSPGQQFAFE
                     VDLDRCTGCKACVTACHSLNGLDEGETWRSVGLIHSVRGKPLQQTVTTACQHCLEPGC
                     SHGCPVKAYDKDPVTGVVKHLDDQCIGCEYCILKCPYDVPQYHHGKGIVRKCDMCIGR
                     LEAGEAPACVQACPTKAIRITLVEVAEVRAHPEDFTALAGAPNQSFTLPTTRYRTARK
                     LPADMEAADAHKVRREKAHLPLVFMLAISQLAAGFYFVLEGASAFASWAAHAGFQAAG
                     HALALGITLLAMAISLSHLGRPLYAFRAFLGWRRSWLSREILAFGVLAPLGSLAAVAT
                     TLAAAPFGLPAPVASLVPHARALLDGGSGAALRILLIFAALAVVHCSAMVYRDTPRVY
                     WATRATSARFLLSAGASGLAAVLALTTLFAALVPDFAAAAPGSLSAWLTGMVAALPLL
                     LIAKLGLEARVLRHEDDQNPTPLKKTALLLKGELSRIHTLRLNAGMLGGILLPILWLF
                     RAPGSNPTLDLGLALVAVAMVAVGEILERYLFFTTCVPPRMPGT"
     gene            1723..>1914
                     /locus_tag="VK150_03325"
     CDS             1723..>1914
                     /locus_tag="VK150_03325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30366.1"
                     /translation="MAIAEKFATWIRQRDGKLTHEMVLTPGRFGLGRTPERLQPDSTT
                     TMICGYCSTGCGLKIHMKDG"
BASE COUNT          286 a          766 c          517 g          345 t
ORIGIN      
        1 gccgtggagc gcttctcgcg gcaccatgac gagttgtctc tccagggtga ctcccgcccc
       61 agcctggaga cccattaccg cgacctcatc cccctcggga tgcctagccc cgggcagcaa
      121 ttcgccttcg aagtggatct cgatcgctgc accgggtgca aggcctgcgt caccgcctgc
      181 cacagcctca acggcctcga cgagggcgag acctggcgat ccgtgggcct cattcacagc
      241 gtgcgcggca aacccctgca gcagaccgtg accaccgcct gccagcactg cctcgagccc
      301 ggctgctccc acggctgccc ggtcaaggcc tacgataaag atcccgtcac gggcgtggtc
      361 aagcacctcg acgatcagtg catcggctgc gaatattgca tcctcaaatg cccttacgac
      421 gtgccccaat accaccacgg caagggcata gtccgcaaat gtgacatgtg catcggccgc
      481 ctcgaggccg gcgaggcccc ggcctgcgtg caggcctgcc ccaccaaggc catccgcatc
      541 accctggtcg aggtggccga agtgcgcgcc caccccgagg acttcaccgc cctggccggc
      601 gccccgaacc aatccttcac cctgcccacc acccgctacc gcaccgcccg caaactgccc
      661 gccgacatgg aggccgccga cgcccacaag gtgcgccgcg agaaggccca cctgcccctc
      721 gtcttcatgc tcgccatctc ccagctcgcc gcgggattct acttcgtcct ggagggcgcc
      781 tccgcctttg cctcctgggc cgcccatgcc ggcttccagg ccgccggtca tgccctcgcc
      841 ctcggcatca ccctgctggc catggccatc agcctttccc atcttggacg cccgctctac
      901 gccttccgcg cctttctcgg atggcgccgc tcctggctca gccgcgaaat cctcgccttc
      961 ggagtcctcg cgcccctcgg gtctttggcc gccgtcgcca cgaccctcgc cgccgcgccc
     1021 ttcggcctgc ccgcgcccgt cgcgtccttg gtaccccatg cccgggccct cctcgacggc
     1081 ggctccggag cggccctgcg tatccttctg atcttcgccg ccctggccgt ggtccactgc
     1141 tccgccatgg tgtaccgcga tacaccccgg gtgtactggg ccacccgcgc cacctccgcc
     1201 cgcttcctgc tctccgccgg cgcctccggc ctcgcggccg ttctcgccct caccaccctg
     1261 ttcgcggccc tggtcccgga cttcgccgcc gccgcgcccg ggtccctctc cgcttggctc
     1321 accggcatgg ttgcagccct gcccctgctc ctcatcgcca agctgggcct cgaagcccgg
     1381 gtcctccgcc atgaggacga ccaaaacccc accccgctga agaagaccgc cctgctcctc
     1441 aagggagagc tcagccgcat ccatactttg cgactcaacg cgggcatgct gggcggcatc
     1501 ctgctgccta ttctctggct cttccgcgcg ccgggatcaa acccaaccct cgacctggga
     1561 ttggccctag tagcggtcgc catggttgcc gtgggcgaga tcctggaacg ctacctgttc
     1621 ttcacgacct gtgtgccgcc gcggatgccc gggacctagg tcgtgacgct gtttctgaaa
     1681 ttttcaattt tcaattgtca attttcaatc gggtgacatc ccatggccat cgcggaaaag
     1741 ttcgccacct ggatccgtca acgcgacggc aagctcaccc atgagatggt tctgactccg
     1801 ggtcgcttcg gcctgggacg cacgccggaa aggcttcaac ccgactccac caccaccatg
     1861 atttgtggtt actgctccac gggctgcgga ctcaagatcc acatgaagga cggc
//
LOCUS       DATGWW010000221         3323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_63524, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000221 DATGWW010000000
VERSION     DATGWW010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3323
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63524"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2884
                     /locus_tag="VK150_03330"
     CDS             <1..2884
                     /locus_tag="VK150_03330"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenosylcobalamin-dependent
                     ribonucleoside-diphosphate reductase"
                     /protein_id="HLP30367.1"
                     /translation="IQSVADDLVNEGGIMDLWTREARLFKYGSGTGTNFSKVRGSEEP
                     LSGGGRSSGLMSFLAVGDRAAGAIKSGGTTRRAAKMVCLDLDHPDIEAFIDWKVTEER
                     KVAMMAAGSAVVRRHWDAICRTVEGSTTKDADPHTNEALRKALARAKREGVPAAFLTQ
                     CLGRLAEGDFARDLAGYDTSWDGEAYYTVGGMNSNNSVRVPDAFMRALEMDGDWELKR
                     RIDGKTSKKLRAKDLWEKVNRAAWACADPGIQFNTTINDWHTCPEDGPINASNPCSEY
                     MFLDDTACNLASLNLCTFLTEDGGFDLAGYRHGIRLWTIVLEISVLMAQFPSESIAKL
                     SYDFRTLGLGYANLGAMLMRMGIPYDSVEGTQWCAALTAILTGDAYAASAEMSRELGP
                     FPGYRKNADHMLRVIRNHRRAAYNAPASEYEQLSIRPQGLHGAGVPKRIVEAARESWD
                     TALTYGEQWGFRNAQVTVLAPTGTIGLLMDCDTTGVEPDFALVKFKKLAGGGYFKLVN
                     RAIPEALARLGYSSTQIQEIERHVVGWLQINDQTPGITRSMLKANGWADEEIALVEQK
                     LPTAFDPAYAIDVERLKNDFSPEQVEAFLLALSGTMTVEGAPHLKDEHLPIFDCANRC
                     GRTGRRYIAPQGHLKMMGAAQPFLSGAISKTINLPAEATVAEIGGIYEASWQLMLKAV
                     ALYRDGSKMSQAMATNLDLLDGADTLLDEQATATEKAPVLAQALTQQLVRTYRRRLPN
                     RRGGYTQSATIGGTKLYLRTGEYEDGSLGEIFLDIHKEGAAFRAVLNCFAIAVSMGLQ
                     HGVPLEEFCDAFLFTRFEPGGMVAGSDTIKLSTSLIDFVFRELAISYLGRYDLAHVEP
                     EQLVNAATGLRPNSQAPGVANLPSLPTGTPLPFPDAPAVGAAAAPAPTPVLVGVSGAK
                     ATVSAAQAAREKGYTGDPCPECGHLTLVRNGACMKCQTCGATTGCS"
     gene            3140..>3323
                     /locus_tag="VK150_03335"
     CDS             3140..>3323
                     /locus_tag="VK150_03335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30368.1"
                     /translation="MPDLLDPATLDLASDPELGPLLAACPDIAPLRFRDGELLVKEGE
                     DSQDLFIVRKGSLVVEK"
BASE COUNT          587 a         1254 c         1024 g          458 t
ORIGIN      
        1 catccagtcc gtcgccgacg acctggtcaa tgaaggcggc atcatggacc tctggacgcg
       61 cgaggcccgg ctcttcaagt acggcagcgg cacgggcacc aacttctcca aggtgcgcgg
      121 ctcggaagag cccttgtcgg gcggcggccg cagctcgggc ctcatgagct tcctggccgt
      181 gggcgaccgc gccgcgggcg ccatcaagag tggcggcacc acccgccgcg ccgcgaagat
      241 ggtctgcctc gacctggatc acccggacat cgaggccttc attgactgga aggtcaccga
      301 ggaacgcaag gtggccatga tggccgcagg cagcgccgtg gtgcgccgcc actgggatgc
      361 catctgcagg accgtcgagg gctccaccac caaggacgcc gatccgcaca ccaacgaggc
      421 cctgcgcaag gccctcgccc gcgccaagcg cgaaggcgtg cccgcggcct tcctcaccca
      481 gtgcctgggc cgcctggccg agggcgactt cgcccgcgac ctcgccggct acgacacctc
      541 ctgggacggc gaggcctact acacggtggg cggcatgaac tccaacaact cggtgcgggt
      601 gcccgacgcc ttcatgcgcg ccctcgagat ggacggcgac tgggagctca agcgccgcat
      661 cgacggcaag accagcaaga agctgcgcgc caaggatctc tgggagaagg tgaaccgcgc
      721 cgcctgggcc tgcgccgatc ccggcatcca gttcaacacc accatcaacg actggcacac
      781 ctgccccgag gatggcccca tcaacgccag caacccctgc tccgagtaca tgttcctgga
      841 tgacacggcc tgcaacctgg cctccctgaa cctgtgcacc ttcctcacgg aggacggcgg
      901 cttcgacctg gcgggctacc ggcacggcat ccggctctgg accatcgtgc tcgagatcag
      961 cgtgctcatg gcccagttcc ccagcgaatc catcgccaag ctgagctacg acttccgcac
     1021 cctgggcctg ggctacgcca acctcggcgc catgctcatg cgcatgggca tcccctacga
     1081 cagcgtggag ggcacccagt ggtgcgccgc gctgacggcc atcctcacgg gcgacgccta
     1141 cgccgccagc gccgagatgt cccgcgagct ggggcccttc cccggctacc ggaagaacgc
     1201 ggaccacatg ctgcgggtca tccgcaacca ccgccgcgcc gcctacaacg cgccggcctc
     1261 ggagtacgag cagctctcca tccgacccca gggcctgcac ggcgccggcg tgcccaagcg
     1321 catcgtcgag gccgcccgcg agagctggga cacggcgctg acctacggcg agcagtgggg
     1381 cttccgcaac gcccaggtga cggtgctggc ccccacgggc accatcggcc tcctcatgga
     1441 ctgcgacacc acgggcgtgg agcccgattt cgccctagtg aagttcaaga agctggcggg
     1501 cggcggctac ttcaagctgg tgaaccgcgc cattcccgaa gccctggcgc gcctgggcta
     1561 ctcctcgacg cagatccagg agatcgagcg gcacgtggtg ggctggctgc agatcaacga
     1621 ccagaccccc ggcatcaccc gcagcatgct caaggccaac ggctgggccg acgaggagat
     1681 cgccctggtg gagcagaagc tccccaccgc cttcgatccc gcctacgcca tcgacgtgga
     1741 gcgcctgaag aacgacttca gccccgagca ggtggaggct ttcctgctgg ccctcagcgg
     1801 caccatgacc gtggaaggcg cgccccacct gaaagatgag cacctgccca tcttcgactg
     1861 cgccaaccgc tgcggccgca cgggccgccg ctacatcgcg ccccagggcc acctgaagat
     1921 gatgggcgcc gcccagccct tcctcagcgg cgccatcagc aagaccatca acctgcccgc
     1981 ggaagccacc gtagcggaga tcggcggcat ctacgaggcc agctggcagc tcatgctcaa
     2041 ggccgtggcc ctctaccgcg acggctcgaa gatgagccag gccatggcca ccaacctgga
     2101 cctgctggac ggcgccgaca cgctcctcga cgagcaggcc accgccaccg agaaggcccc
     2161 ggtcctggcc caggccctca cgcaacagct ggtgcgcacc taccggcgcc gcctgcccaa
     2221 ccgccgcggc ggctacaccc agagcgccac catcggcggc accaagctct acctccgcac
     2281 cggcgaatac gaggacggca gcctcggcga gatcttcctc gacatccaca aggagggcgc
     2341 cgccttccgc gccgtgctca actgcttcgc catcgccgtg agcatgggcc tgcagcacgg
     2401 ggtgcccctg gaagagttct gcgacgcctt cctgttcacc cgcttcgagc ccggcggcat
     2461 ggtggccggc agcgacacca tcaagctgag caccagcctc atcgacttcg tgttccgcga
     2521 gctggccatc agctacctgg gccgctacga cctggcccac gtggagcccg agcagctcgt
     2581 gaacgccgcc accggcctgc gccccaacag ccaggccccc ggcgtggcca acctgcccag
     2641 cctgcccacg ggcacgcccc tgcccttccc cgatgcgccc gccgtcggcg cggctgccgc
     2701 tcccgccccc acccccgtgc tggtgggcgt ctccggcgcc aaggccaccg tcagcgccgc
     2761 ccaggccgcc cgcgagaaag gctacaccgg cgacccctgc cccgaatgcg gccacctcac
     2821 cctggtccgc aacggtgcct gcatgaagtg ccagacctgt ggggcgacca cgggctgcag
     2881 ctaggaaaac gatccaccgc agagaacgca gaaaagaagg ggggagacat ccgcccttct
     2941 ttttttccac gtgcggcaga cgaccggagg gaaaagccaa aagctgaaac cgcagatgac
     3001 gcagatgacg cagatggcgt agatgcgcac cggcccatcc ttccggttgt ccgagcttta
     3061 ggccctggaa gccacttcgg cctcctccca tccgcgttta tccgtggcag atcttccttt
     3121 ttcgccacaa gatggcccca tgcctgatct cctcgacccc gccaccctcg acctggcttc
     3181 ggacccggag ctggggcctt tgctggccgc ctgcccggac atcgcgccgc tgcggttccg
     3241 ggatggggag ctgctcgtca aggaggggga ggattcgcag gacctcttca tcgtccgcaa
     3301 gggcagcctg gtggtggaga agg
//
LOCUS       DATGWW010000222         6637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_329897, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000222 DATGWW010000000
VERSION     DATGWW010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6637
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329897"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="VK150_03340"
     CDS             <1..375
                     /locus_tag="VK150_03340"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLP30369.1"
                     /translation="VTRLDRTAFGTPWRDPADHEALWLIPEVAFARWARIPAAGEAEL
                     LRIAVDPAHRGRGLGRTLLEACQRDLAGEGLTQLYLEVRVSNRAAIQLYRACGWEPCG
                     RRPGYYADGEDAALFQWGQASS"
     gene            497..994
                     /locus_tag="VK150_03345"
     CDS             497..994
                     /locus_tag="VK150_03345"
                     /inference="COORDINATES: protein motif:HMM:NF014173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HLP30370.1"
                     /translation="MLGISRQTDYAARVVLHLACLAPGARVPIADIARHRMLPLDFVR
                     RIVGDLVKAGILATSRGSGGGVSLARPAAEISLGEVVHAMEGGIALNHCVSDRRVCPL
                     AARCPVQSVWVDATQVLDDYLTSVRFDALARRSSEHQPAHLRVQATGRVRGSHRCELP
                     AAALA"
     gene            1093..1575
                     /locus_tag="VK150_03350"
     CDS             1093..1575
                     /locus_tag="VK150_03350"
                     /inference="COORDINATES: protein motif:HMM:NF014173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HLP30371.1"
                     /translation="MIGISRQTDYAARLVLHLACLAPGTRVSIAEISKTRLLPAPFTR
                     RLVGCLVKEGILHTVRGTGGGISLARPASEISLLDILNAVEGGVVLNACQEGGRPCVF
                     SQGCLVQKAWGDATDLLQRHLATVTFDTLVGASPEHQAAHGQRAADARKPPRPRSSTP
                     "
     gene            1778..2386
                     /locus_tag="VK150_03355"
     CDS             1778..2386
                     /locus_tag="VK150_03355"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpW family outer membrane protein"
                     /protein_id="HLP30372.1"
                     /translation="MKTLASLTLLAAALAAPGLKAETPWMIRLRAVSLQPANTSDAAP
                     GIPADAIHVSNKTIPEVDFSYFFTPNLAAELILTVPQKHDVTLNGTKIGTFKHLPPTL
                     TAQWHFLPGQTVNPYVGAGLNLTLISDVKLADGVLDLDSSSVGAALQAGVDFKVASNC
                     TINLDIKYVQIQSDVKVAATGAKVTTVKVDPMLYGVGVGYRF"
     gene            complement(2612..3871)
                     /locus_tag="VK150_03360"
     CDS             complement(2612..3871)
                     /locus_tag="VK150_03360"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HLP30373.1"
                     /translation="MGTDGAEAVRRSFLTGFVPRADGPLLDAPPPEPAWDAVDAEGGP
                     YPRLSAEFWTSRQRQAANLHEISYRACYKPQLPRHFIERLTGPGDRVYDPFSGRGTTA
                     LEAALLGRRVAANDVNPLARMLAEPRLTPPEPAEVAARLAAIPKAGASDGLDLGMFFH
                     PDTEAEIRGLRDWCLARAESGELDPLDTWIRMVATNRLTGHSPGFFSVYTLPPNQAVS
                     AEKQRQINAQREQAPAYRDTHALILKKTKQLLSGLQADQRRNLAFAAQDARFLTGDAR
                     QTCNLMAGCMALTVTSPPFLDVVDYSGDNWLRCWFTGLDAEAIGRGISTPRTVAAWSD
                     TMADVFAELHRLTRPGGFVAFEVGEVRRGKVRLDEVVLPLGLKAGFRAHGVLVNTQTF
                     TKTAHIWGVGNNDKGTNSNRVVLFEKA"
     gene            3919..6012
                     /locus_tag="VK150_03365"
     CDS             3919..6012
                     /locus_tag="VK150_03365"
                     /inference="COORDINATES: protein motif:HMM:NF039586.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP30374.1"
                     /translation="MPSPQPKRHPELTRLYVAVGLGVVITMIILAYKTVGNRIAEGGL
                     DAPSRWALVALGLANVLAIGTLLFIVARSLAKLYFERKSGILGSRLRTRMVLTLFIVG
                     IVPSLILFLVGRNFINKNVERWFSPETEVAIRDGQKLAEDLRAAAMARLDFGTGRLLD
                     SASAEPQAIRAASGLDLVAHLGARSDSARGESVRSVDLAPDLAPPDLAALAGDARQET
                     PEGLWLLRAVPRGDGVWAAGVFTPRATVDRVQALEQRFKESQQIRAARDTLQTLPQST
                     FLFLTMLTLFFAVWSGLALAKSLSEPIRALAKAAQRVGAGDLDVQLPELGEDELAFLA
                     RTFNAMTRDLKTNQAAIQAQASRLEQQRAYLDQLLAALPVGVLSWRADGELRTFNAAA
                     RAWLGLDAFDPTEARWATVEALPRLGRLPDLLAAVRESGRGVQEELRLGGEGEGRPVR
                     AILEPLQGGGVLAVLEDLSLLAQAEKRAAWQEVARRMAHEVKNPLTPIQLTAQRLLRR
                     NREGRLDPAAVQEGAETILAEVASLSRLVDSFSRFARLPVPQFSPCDPADLLRQVAAL
                     YSPNHPDIRWDLRLPGQPVSALWDGDMVKRALINYVDNAVAALEGGRGAVQLSLDEEG
                     EYLRFDVVDGGAGVPEGDRDRLFEPYFSTKRKGTGLGLAIVRRIAQDHGGDARYEPRE
                     PGSRFSLILPKAGRS"
     gene            6194..>6637
                     /locus_tag="VK150_03370"
     CDS             6194..>6637
                     /locus_tag="VK150_03370"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLP30375.1"
                     /translation="MDREGTRDAGGTCLIAGCGYVGTRLARRLAARGPVLALVRSAAS
                     AEGLAAAGIRARSVDFDAPAASSLEDLGPFDAVAYLAPPEGPGETDLRLARFLAALGD
                     RRPQVLLYLSTTGVYGDTGGAVVDEASPTAPGDARSRQRLDAERQA"
BASE COUNT          885 a         2377 c         2380 g          995 t
ORIGIN      
        1 gtgacgcggc tcgaccgcac cgccttcggc acgccctggc gggatcccgc cgaccatgag
       61 gccctctggc tcatccccga ggtggccttc gcccgctggg cccgcatccc ggccgcggga
      121 gaggccgagc tgctgcgcat cgccgtggat cccgcccacc ggggccgggg cctgggccgc
      181 accctgctgg aggcctgcca gcgcgacctg gccggggagg gcctgacgca gctctacctg
      241 gaggtgcgcg tgtcgaaccg cgccgccatc cagctctacc gggcctgcgg ctgggagccc
      301 tgcgggcggc gccccggcta ctacgccgat ggcgaggacg cggccctgtt ccagtggggg
      361 caggcctcca gctgaggcgg agggcaggcg ccatccgtga tcgcgaccgg gtctagtggg
      421 cattgttgac ctgggggttt ccatgcattg accaatagga ccggctcact catatttggg
      481 ttttccggtg gcccccatgc tcggcatctc ccgacagacg gattacgcgg cccgcgtggt
      541 gctgcacctg gcctgcctgg cgccgggggc ccgggtgccc atcgccgaca tcgccaggca
      601 ccgcatgctg ccgctggact tcgtgcggcg catcgtgggc gacctggtga aggcggggat
      661 cctcgccacc tcgcggggct cgggcggcgg cgtgagcctg gcccggcccg cggcggagat
      721 ctcgctgggt gaggtggtgc acgccatgga gggcggcatc gccctcaacc actgcgtgag
      781 cgatcgccgg gtctgccccc tggccgcccg gtgcccggtg cagtccgtgt gggtggacgc
      841 cacccaggtg ctggacgact acctcacctc cgtgcgcttc gacgcgttgg cgcggcgcag
      901 ctcggagcac cagccggccc acctgcgggt gcaggccacg ggtcgggtgc ggggctccca
      961 ccgctgcgag ctccccgcgg ccgccctggc ctgaagggca ggtcccgtct cgcttctaga
     1021 ttcatgacca atgggtcttg accaaggtta cgctttgggt aatgttatat ccgaagtcac
     1081 ctttggagtc ccatgatcgg catctcccgg cagacggatt atgcggcgcg gctcgtgctg
     1141 cacctggcct gcctggcgcc gggcacgcgg gtctccatcg ccgagatctc caagacccgc
     1201 ttgctgcccg cgcccttcac ccggcgcctc gtgggctgcc tggtgaagga gggcatcctc
     1261 cacaccgtgc gcggcaccgg gggcggcatc agcctggcgc gtcccgcctc ggagatctcg
     1321 ctgctggaca tcctcaatgc ggtggagggc ggcgtggtgc tcaacgcctg ccaggaaggc
     1381 ggccggccct gcgtgttcag ccagggctgc ctggtgcaga aggcctgggg cgatgccacg
     1441 gacctgctgc agcgccacct ggccaccgtg accttcgaca ccctggtggg cgcttcgccg
     1501 gagcaccagg cggcccacgg ccagcgggcc gccgacgccc gcaaaccgcc acgcccgcga
     1561 tcttccaccc cctgacccgg cgtccccggg ccctttccgc ctctcgccac gttcccacgc
     1621 ctgccggttt cgcgccggcg ggatgagctc tgcccttttt ccgcccccac gcggggcctg
     1681 tcaaacaccc ctgtctgccg gacccgcgcc ggtcgggatg cccctgcctt tcaacccgct
     1741 tccgggagat cccggaggct ttttctggat gcgttccatg aagacccttg cttccctcac
     1801 cctgctcgcc gccgccctcg ccgcgccggg cctgaaggcc gaaaccccct ggatgatccg
     1861 cctgcgcgcg gtgtcgctgc agccggcgaa cacgtcggac gcggcgccgg gcatccccgc
     1921 cgacgcgatc cacgtcagca acaagaccat tccggaagtg gacttcagct acttcttcac
     1981 gccgaatctc gcggcggagc tgatcctcac ggtgccccag aagcacgacg tcacgctgaa
     2041 cggcacgaag atcggcacct tcaagcacct gcctcccacc ctcacggccc agtggcactt
     2101 ccttcctggc cagacggtga acccctacgt gggcgcgggc ctgaacctca cgctgatctc
     2161 ggatgtgaag ctggccgacg gcgtgctgga cctcgacagc agcagcgtcg gcgccgccct
     2221 ccaggcgggc gtggacttca aggtggcctc gaactgcacc atcaacctgg acatcaagta
     2281 cgtgcagatc cagagcgacg tgaaagtcgc cgccaccggc gccaaggtga cgacggtgaa
     2341 ggtggacccg atgctgtacg gcgtcggtgt cggctatcgg ttttaatcct ctccggggtt
     2401 ccgcgccagc gcgcctccag ctgacgcaac gctcccgcgt tgctcccacg cgcctgcggg
     2461 cgcgtggagc tggagcctcc cccggacccc cgcgcgaagg cccggctgag ccgggccttt
     2521 gctttgcagt aaccatcggt cgtgcgtgga tcttggctgg ggcctctggt tgggttgctt
     2581 gcgctcatgc atggcctgat ggtcttgaag gtcatgcctt ctcgaacagc acgacgcggt
     2641 tgctgttggt gcctttgtcg ttgttgccga cgccccagat gtgggcggtc ttggtgaagg
     2701 tctgggtgtt cacgagcacg ccgtgggcgc ggaatccggc tttgaggccc aggggcagca
     2761 ccacttcgtc gaggcgcacc ttgccgcggc gcacttcgcc cacctcgaag gccacgaaac
     2821 cgccggggcg ggtcaggcgg tgcagctccg cgaagacgtc agccatggtg tcagaccagg
     2881 cggccacggt gcggggggtg ctgatgccgc ggccgatggc ctcggcgtcg aggcccgtga
     2941 accagcagcg cagccagttg tcgccgctgt agtccaccac gtcgaggaag ggcggggagg
     3001 tcacggtgag ggccatgcag cctgccatga ggttgcaggt ctggcgggca tcccctgtga
     3061 ggaagcgggc gtcctgggcg gcgaaggcga ggttccgccg ctggtcggcc tgcaggcccg
     3121 agagcagctg cttcgtcttt ttgaggatga gggcgtgggt gtcgcggtag gcgggcgcct
     3181 gctcgcgctg ggcgttgatc tggcgctgct tctcggcgct cacggcctgg ttgggcggca
     3241 gggtgtagac ggagaagaac ccggggctgt ggccggtgag gcggttggtg gcgaccatgc
     3301 ggatccaggt gtcgagggga tccagctcgc cgctctcagc gcgggccagg caccagtcgc
     3361 gcaggccgcg gatctcggcc tcggtgtccg ggtggaagaa catgccgagg tccaggccgt
     3421 cgctggcgcc ggccttcggg atggccgcga gccgcgcggc gacctcggcg ggttccggcg
     3481 gcgtcaggcg gggctcggcc agcatccgcg ccagggggtt cacgtcgttg gccgccaccc
     3541 gccggccgag gagggccgcc tccagcgcag tggtgccgcg cccgctgaag ggatcgtaga
     3601 cccgatcgcc ggggccggtc aggcgctcga tgaagtgccg gggcagctga ggcttgtagc
     3661 aggcgcggta cgagatctca tgcaggttcg cggcctggcg ctgccgcgag gtccagaact
     3721 cggcggagag gcgcgggtag gggccgccct cggcgtccac cgcgtcccag gcgggttcag
     3781 gcgggggcgc gtcgagcagc gggccatcgg cccggggcac gaaacccgtg aggaagcttc
     3841 gccgcaccgc ctccgcaccg tccgttccca tccgcttccg cctgcctttc ctggaacatc
     3901 caggatagcc tgctggggat gccgagcccc caaccgaaac gccaccccga gctgacgcgc
     3961 ctctacgtgg ccgtgggcct gggcgtggtg atcaccatga tcatcctggc ctacaagacc
     4021 gtggggaacc gcatcgcgga aggtgggctg gacgcgccgt cccggtgggc gctggtggcg
     4081 ctgggcctgg ccaacgtgct ggccatcggc accttgctct tcatcgtggc ccgcagcctc
     4141 gccaagctct acttcgagcg gaagagcggc atcctgggtt cccggctgcg cacccgcatg
     4201 gtgctgaccc tcttcatcgt gggcatcgta cccagcctga tcctcttcct ggtgggccgg
     4261 aacttcatca acaagaatgt ggagcgctgg ttcagccccg agaccgaggt ggccatccgc
     4321 gacggccaga agctggcgga ggacctgcgc gccgccgcca tggcccggct ggatttcggc
     4381 acggggcgcc tgctggattc ggcatcggcg gaaccccagg ccatccgcgc cgcctcgggc
     4441 ctcgacctcg tggcccacct gggcgcccgg agcgacagcg cccggggtga gagcgtccgg
     4501 tccgtggacc tggcgccgga cctggcaccg ccggatctgg ccgccctggc tggggacgca
     4561 cggcaggaga cgccggaggg cctgtggctg ctgcgggcgg tgccacgggg cgacggggtc
     4621 tgggccgcgg gcgtcttcac gccccgggcg acggtggacc gggtgcaggc gctggagcag
     4681 cggttcaagg agagccagca gatccgcgcc gccagggaca ccctgcagac gctgccccag
     4741 agcaccttcc tgttcctcac catgctcacc ctgttcttcg ccgtgtggtc gggcctcgcc
     4801 ctggccaagt cgctgagcga gcccatccgc gccctggcca aggcggccca gcgcgtgggc
     4861 gccggcgacc tggacgtgca gctgccggag ctgggcgagg acgagctggc cttcctggcc
     4921 cgcaccttca acgccatgac ccgcgatctg aagaccaacc aggccgccat ccaggcccag
     4981 gccagccggc tggagcagca gcgggcctac ctcgaccagc tgctggcggc cctgcccgtg
     5041 ggcgtgctca gctggcgggc ggacggcgag ctgcgcacct tcaacgcggc ggcccgggcc
     5101 tggctggggc tggacgcctt tgatcccacc gaggcccgct gggccacggt ggaggccctg
     5161 ccgcgcctgg gccgcctgcc ggacctgctg gctgccgtgc gggaatccgg ccggggcgtg
     5221 caggaggaac tgcggctggg cggcgagggc gagggccggc ccgtgcgggc catcctcgag
     5281 cccctgcagg gcggcggcgt gctggcggtg ctggaggatc tctccctgct ggcccaggcg
     5341 gagaagcgcg ccgcctggca ggaagtggcc cggcgcatgg cccacgaggt gaagaaccct
     5401 ctcacgccca tccagctcac ggcccagcgc ctgctgcgcc gcaaccggga aggccgcctg
     5461 gatccggcgg cggtgcagga gggcgcggag accatcctgg cggaggtcgc cagcctgtcc
     5521 cgcctggtgg acagcttcag ccgcttcgcg cggctgccgg tgccccagtt ctccccctgc
     5581 gatcccgcgg acctgctccg ccaggtggcg gcgctctaca gccccaacca ccccgacatc
     5641 cgctgggacc tgcggctgcc cggccagccc gtgtcggccc tctgggacgg cgacatggtg
     5701 aagcgggccc tcatcaacta cgtggacaac gccgtggcgg ccctggaggg cgggaggggc
     5761 gccgtgcagc tgtccctcga cgaggagggc gagtacctgc gcttcgacgt ggtggacggc
     5821 ggggcggggg ttcccgaagg cgaccgcgac cggctcttcg agccctactt ctccaccaag
     5881 cgtaagggca cgggcctggg cctcgccatc gtccgccgca tcgcccagga tcacggcggc
     5941 gacgcacgct acgaaccccg cgagcccggc agccgcttca gcctcatcct gcccaaggcc
     6001 gggcgcagct gacccgaaac tgacccgggg cgaaccggag gcgatcaggc ccgccgcctc
     6061 cgccggagcc agagccccag cgggcccagc accacccagg ccagcagcac gagcttgatc
     6121 agcggtgaca cgcgagaacc ccctgccgac agcctctcat gccccggggc cgggggaccg
     6181 ctatgctggc cccatggacc gtgagggaac cagagacgct ggcggaacct gcctcatcgc
     6241 gggctgcggg tacgtgggaa cgcgcctggc ccggcgcctg gcggcccggg ggccggtgct
     6301 ggctctggtg cgcagcgcgg cctcggcgga aggcctcgcc gcggccggga ttcgggcccg
     6361 cagcgtggat ttcgacgcgc cggccgcctc ttccctggag gatctcggtc ccttcgacgc
     6421 ggtggcgtac ctggcgccgc cagaagggcc gggcgagacg gacctccgcc tcgcccggtt
     6481 cctggccgcc ctgggcgacc ggcggcccca ggtgctgctc tacctgagca ccaccggcgt
     6541 gtatggcgac acgggcggcg cggtggtgga cgaggccagc cccacggcgc ccggcgacgc
     6601 gcggtcgcgc cagcggctcg atgccgagcg gcaggcc
//
LOCUS       DATGWW010000223         1599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_243962, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000223 DATGWW010000000
VERSION     DATGWW010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243962"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1599
                     /locus_tag="VK150_03375"
     CDS             <1..>1599
                     /locus_tag="VK150_03375"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP30376.1"
                     /translation="EDDALILEAHLRNHGLDFEAGRIDSLQDLDQALGAQPWDVLLSD
                     YALPDTDGFEIIRRTLQTHPDLPCIVVSGQVGEEAAVETLRAGAKDFIGKSNLSRLIP
                     AIQRETAEAKDRAEARLAKQELYETERALRQTEALFTTINSHLVDLVAIIDEHGRRIY
                     SSPSYGFSLGYSQEEISRIGSKELVHPDDLGVIEDALGALFRGERPGRLEYRLLPKDG
                     RYLFFESTAVPIAGSEGGPMQALFVARNVTERKEEEKRRAVMEIQLRQAQKMEAIGQL
                     AAGIAHEINTPTQYIGDNARFLRDSFEEVFSLMGRLMAYLLAIGAGEGPAAAEARQAL
                     ADLQGADLDYLGVEIPKAIIQSLEGVARITKIVGAMKDFSHPGSESRVDTDIHRAIES
                     TVTVSRNEWKYVAELETYFDPEVPLVPCFPGEFNQVILNLIVNAAHAIEAAKTTHPDG
                     AMGRIMISTHRRGSEVEIAVADDGTGIPHEILHRIYDPFFTTKPLGKGTGQGLAIAHG
                     VIVEKHGGRLTVDTSPGAGTTFRI"
BASE COUNT          309 a          516 c          532 g          242 t
ORIGIN      
        1 ccgaggatga cgccctgatc cttgaggccc acctgcggaa ccacgggctc gacttcgaag
       61 cagggcggat cgacagcctg caggaccttg accaggctct cggcgcccaa ccctgggacg
      121 tgctcctgtc ggactacgcc cttccggaca cggatggttt cgagatcatc cggaggaccc
      181 tccagaccca tcccgacctt ccctgcatcg tggtttcggg gcaggtgggg gaggaggccg
      241 cggtggagac gctcagggcc ggggcaaagg atttcatcgg gaaatcgaac ctgagccggc
      301 tgatcccggc aatccagcgg gaaactgcgg aagccaagga ccgggccgaa gcacgcctgg
      361 cgaagcagga actctacgag accgagcggg ccctcaggca gacggaggcc ctgttcacca
      421 ccatcaacag ccatctcgtg gacctggtcg ccatcatcga cgagcacggc agacgcatct
      481 attcgagtcc ctcgtacggc ttctcgctgg gttattcgca ggaggagatc tcgcggatcg
      541 gctcgaagga gctggtgcat cccgacgacc tcggcgtgat cgaggacgcc ctgggcgcgc
      601 tgttccgcgg agaacggccg ggccggctcg agtaccggct cctgcccaag gacggccggt
      661 acctcttctt cgagagcacg gcggtgccca tcgccggttc cgagggcggc cccatgcagg
      721 cgctgttcgt cgcccgcaat gtcaccgaac ggaaggagga ggagaaacgc cgcgcggtga
      781 tggagatcca gctgaggcag gcgcagaaga tggaagcgat cggccagctg gcggcgggca
      841 tcgcccatga gatcaacaca cccacccagt acatcgggga caatgcgcgg ttcctgcggg
      901 attccttcga agaggtgttt tcgctgatgg gccgcctcat ggcctacctg ctcgccatcg
      961 gcgcaggcga ggggccggcg gcggcggagg cgcgccaggc tctcgcggac ctgcaggggg
     1021 ccgacctgga ctacctcggc gtggagatcc cgaaggccat catccagagc ctggaggggg
     1081 tggcccggat caccaagatc gtcggagcca tgaaggactt ctcccacccg gggagcgaat
     1141 ccagggtcga caccgacatc caccgcgcca tcgagagcac ggtcaccgtg tcgcgcaacg
     1201 agtggaagta cgtggccgaa ctggaaacgt acttcgatcc ggaggttccg ctggtgccgt
     1261 gcttcccggg tgagttcaac caggtgatcc tcaacctcat cgtcaatgcg gcccacgcca
     1321 tcgaagcggc gaagaccact catcccgacg gggcgatggg gcggatcatg atctccaccc
     1381 atcgccgcgg atccgaagtg gagatcgccg tggccgacga cgggaccggc attccgcacg
     1441 agatcctgca tcggatctac gatcccttct tcaccaccaa gcccttggga aagggcaccg
     1501 ggcaggggct cgccatcgcc catggggtga ttgtcgagaa gcatggcggc cgactcacgg
     1561 tggacacctc acccggggcg ggaaccacgt tcaggatca
//
LOCUS       DATGWW010000224         2226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_425763, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000224 DATGWW010000000
VERSION     DATGWW010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425763"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..221)
                     /locus_tag="VK150_03380"
     CDS             complement(<1..221)
                     /locus_tag="VK150_03380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30377.1"
                     /translation="MSDKECRMALKNRIILIAGDILAALLALPASLAVKLRALPGPED
                     IRALGWGMVAGFVAVVVFLSFLAEFYGSHR"
     gene            complement(292..>2226)
                     /locus_tag="VK150_03385"
     CDS             complement(292..>2226)
                     /locus_tag="VK150_03385"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP30378.1"
                     /translation="LELGEIDAAGATAAGLLQKFPQGGEGHRLKGMVAYHLKRYPEAI
                     ADLQTANKLQASVSGYYFLGLSHYHQGELESALNQFRLILDRVPTFIQARLLTGMVLL
                     RQKRLDDAVAELTRVIEAEGQNALAHNLLGSAYMAMGQYTEGMQELDLATRLDPKLVD
                     THLKKGLFHLSQGKTAEVEADLATAVRVAPEALNTRFILCSFYLHRKNRAKALATLRE
                     GLSGKPEDAVLYAGMAKIVLADRNTAEGVAYLNKAKQINPDALDPRFTLAAHYSSSGN
                     TSAALKEYQEILSKDPRSLKANLRLAALMEMSGQDQRAFEHYRQARESKAPAAFQALA
                     GYFERRGESRRALAALEEGLKTVPRNAPLLEQKVMLHLKEKQYRAALAAIEDVEAVAP
                     DRSIPLRISALVAMDRLPEALRQAERAISRKPESAYGFMLLASVHRAEGKLETAIAEL
                     KKGLERDKGNPQAALMLAGLYAASGRHDLAQGTCDEIVRDLPGFAPAFYAQGSFLEAR
                     GDKRGAAAKYRAALALSDSLTPALNNLAVLYAEGLGTPQEALQLAEQAFALEPANPAI
                     MDTLGYALFKNGRQAEALRMLEKAEAILPGNPSVNYHLALVHRASGEKRQAVARLRKA
                     LATKDFAEATQARNLLVELN"
BASE COUNT          332 a          759 c          721 g          414 t
ORIGIN      
        1 cggtggctgc cgtagaactc ggccaggaac gacagaaaca ccaccacggc aacgaatccc
       61 gccaccatcc cccaccccag tgcccggatg tcctccgggc ccggcagggc gcgcagcttc
      121 accgccaggc tggccggcag cgccagcagc gccgccagga tgtctcccgc aatcaggatg
      181 attctatttt tcagggccat gcggcattcc ttgtcgctca tgaaggtcgc cctcctgacg
      241 agggtcacag ccgggttgcc ccagggcgga aaaaaccgtg tcggaccgaa actagttcaa
      301 ctcgaccagc aggttcctgg cctgggtcgc ctcggcaaag tcctttgtgg ccagggcctt
      361 cctgagccgg gccaccgcct gtcgcttctc ccccgatgcc cggtgcacca gggccaggtg
      421 gtaattgacc gacgggttgc cgggaaggat cgcctcggcc ttttccagca tccgcagggc
      481 ctcggcctgg cgtccgtttt tgaacagggc atagcccagc gtatccatga tcgccgggtt
      541 ggccggctcc agcgcaaagg cctgctcggc cagttggagc gcctcctgcg gcgtgcccag
      601 cccttcggca tacaggaccg ccaggttgtt cagggccggg gtcagggagt cggacagggc
      661 cagggccgcc cggtacttgg ccgcagcgcc ccgtttgtcg ccgcgcgctt ccaggaatga
      721 accctgcgcg tagaaggccg gggcgaatcc gggcagatcc cggacgattt cgtcacaggt
      781 gccctgggcc aggtcatgcc ggcccgaggc ggcgtagaga ccggccagca tcaatgcggc
      841 ctggggattg cccttgtcgc gctccagccc ctttttcagt tcggcgatgg cagtctccag
      901 ctttccctcg gcccgatgga ccgatgccag cagcatgaag ccataggcgg actcgggctt
      961 gcggctgatg gcccgctcgg cctgcctgag cgcctcgggc agccggtcca tggccaccag
     1021 ggccgagatg cgcagcggga tgctccggtc aggcgcaacc gcctccacat cctcgatggc
     1081 agcaagggcg gcccggtact gcttttcctt caggtgcagc atcaccttct gttcgagcag
     1141 gggggcgttg cgggggaccg tcttcagccc ctcctccagt gccgccaggg cccggcggct
     1201 ctccccccgc cgctcgaagt atccggccag ggcctgaaag gcggccggcg ccttgctctc
     1261 cctggcctgg cggtaatgct cgaaggcccg ctgatcctgt ccgctcatct ccataagcgc
     1321 cgccaggcgc aggttggcct tcaggctgcg cgggtccttg ctgaggatct cctggtattc
     1381 tttcaatgcc gctgaggtat tgccgctgga tgaataatgg gcggccaggg tgaagcgcgg
     1441 atcgagcgcg tcggggttga tctgcttggc cttgttcagg tatgccaccc cctcggccgt
     1501 gttccggtcg gccagcacga tcttggccat gccggcgtac agcaccgcat cctccggctt
     1561 gcccgacagc ccctcccgca gggtggccag cgccttggcc cggttctttc ggtgcagata
     1621 gaacgaacag aggatgaagc gggtattcag cgcttccggt gccaccctga cggcagtggc
     1681 caggtcggcc tccacctcgg cggtctttcc ctggctcagg tggaacagcc cttttttcag
     1741 gtgggtgtcg accagtttcg gatcgagccg cgtggccagg tcgagctcct gcatcccttc
     1801 ggtgtactgc cccatggcca tgtaggcgct gccgaggagg ttgtgggcca gggcgttctg
     1861 tccctccgcc tcgatcaccc gggtaagctc cgccaccgca tcgtcgagac gcttctgcct
     1921 gagcaggacc attccggtca acagccgggc ttggatgaag gtgggcacgc ggtccagaat
     1981 cagccggaac tggttcagcg cgctctccag ctccccctgg tgatagtggc tcaggccgag
     2041 aaagtagtag ccgctgacgc tggcctgcag cttgttggcg gtctgcaggt cggcgatcgc
     2101 ctcggggtag cgcttcaggt ggtaggccac catccccttg agccggtgcc cttccccccc
     2161 ctggggaaac ttctgcagca gccctgcggc ggtggccccg gcggcgtcga tctcacccag
     2221 ttcgag
//
LOCUS       DATGWW010000225         1869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_63762, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000225 DATGWW010000000
VERSION     DATGWW010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63762"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="VK150_03390"
     CDS             <1..362
                     /locus_tag="VK150_03390"
                     /inference="COORDINATES: protein motif:HMM:NF018984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CGNR zinc finger domain-containing protein"
                     /protein_id="HLP30379.1"
                     /translation="FSARARDRVLPPEALACLNAQLREALPHLVVDGAGPAPEWQWRD
                     GAQFLTSPLWPIVRAAADLLTSREAPPVRECDGAQCTWLFLDRSRGRSRRWCSMASCG
                     NRAKARRHYHRGRAEGS"
     gene            complement(644..>1869)
                     /locus_tag="VK150_03395"
     CDS             complement(644..>1869)
                     /locus_tag="VK150_03395"
                     /inference="COORDINATES: protein motif:HMM:TIGR01525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042625 - ATPase-coupled ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HLP30380.1"
                     /translation="LAQIVKSVQGALASKSPLERTVDRVSRVFIPAVLALAALTVAAC
                     LFRGLPATEAMLRGIAVLVIACPCALGIATPLATTAAIGAASRQGIIIRDVKVLETFR
                     KVDLLLLDKTGTLTEGDFRVRYTVLDDLDLVAGLESYSEHPLAHAVMRHAAEQGLGPA
                     DATDIVVREGLGLIGTVKGRRVAVGNRRLMAEVGLAIPAVLQPLVEGWEAEGLTVAFA
                     SVDGACSGALAFGDRPRAEAAAVVAELRARGVQTVLLSGDAPATTERIARMVGLDLWV
                     GGVSPAEKADTVRRFQAEGKVVAMVGDGINDAPALAAADLGIAMGSGADLATHAAPVV
                     LMRDSLTRITSVFRLATLTLRVLKQNLFWAFFYNTLGISLAMTGVLNPILAAAAMVLS
                     SLSVIGNSLRLNRAG"
BASE COUNT          264 a          681 c          684 g          240 t
ORIGIN      
        1 tcttctcagc ccgggcccgg gatcgggtcc tgccgcccga ggccctggcc tgcctcaatg
       61 cgcagctccg ggaggccctg ccccacctgg tggtggatgg cgcgggcccg gcgccggaat
      121 ggcagtggcg ggacggcgcc cagttcctga cctcccccct ctggcccatc gtgcgggcgg
      181 cggcagacct gctcacctcg cgggaggcac cgccggtgcg cgagtgcgac ggcgcccagt
      241 gcacctggct cttcctcgac cgcagccgtg ggcgctcccg ccgctggtgc tccatggcca
      301 gttgcggcaa ccgcgccaag gcccgccgcc actaccaccg ggggcgggcc gagggctcct
      361 gagtttcggc gccgtcgcgg ttgcgttcag aggaaacgat tcaccacgga gacaccgagg
      421 gcactgagag gttggtccag gcgagcttcg cgagaccagt cgacgcgggc ggacggccac
      481 gcgatcgcgc ggattctgcc cgcgtcgact ggcggggccg catgcggccc cggggcgcgt
      541 cgcgccccgc gaagcaggat gggtgcacac ggaggcctcc gtgtcccctc cgcgatctcc
      601 gtgcctccgt ggtgaatcct tgacgaccgt acccggaacg cccttaaccg gcccggttca
      661 gccgcagcga gttgccgatg accgagaggc tggacagcac catggccgcg gcggcgagga
      721 tggggttgag cacgccggtc atggccaggg agatgccgag ggtgttgtag aagaaggccc
      781 agaacaggtt ctgcttgagc acccgcaggg tgagggtggc gaggcggaac acgctggtga
      841 tgcgggtgag ggaatcccgc atgagcacca ccggcgcggc gtgggtggcc aggtcggccc
      901 ccgatcccat ggcgatgccc aggtctgccg cggccaaggc cggggcgtcg ttgatgccgt
      961 cgcccaccat ggccaccacc ttgccctcgg cctggaagcg gcggaccgtg tcggccttct
     1021 ccgcgggcga gacgccgccg acccacaggt cgagccccac catccgggcg atgcgctcgg
     1081 tggtggcggg cgcgtccccc gacagcagca cggtctgcac cccgcgggcc cggagctccg
     1141 ccaccacggc ggcggcctcc gcccggggcc ggtcgccgaa ggccaacgcg ccggaacagg
     1201 ctccgtccac cgaggcgaag gccaccgtga gcccctcggc ctcccagccc tccaccagcg
     1261 gctgcagcac cgccgggatc gccaggccca cctcggccat gagcctgcga ttgcccaccg
     1321 cgacgcggcg gcccttcacg gtgccgatca gcccgaggcc ctcccgcacc acgatgtccg
     1381 tggcgtcggc ggggcccagg ccctgctcgg cggcatggcg catcacggcg tgggccaggg
     1441 ggtgctcgga gtaggattcc agcccggcca ccaggtcgag gtcatccagc accgtgtacc
     1501 gcacccggaa gtccccctcg gtgagggtgc cggtcttgtc gaggagcagc aggtccacct
     1561 tgcggaaggt ctcgagcacc ttcacgtcgc ggatgatgat gccctgccgc gaggccgcgc
     1621 cgatggccgc ggtggtggcc agcggcgtgg cgatgcccag ggcgcagggg caggcgatca
     1681 ccagcaccgc gattccccgc agcatggcct ccgtggccgg caggccacgg aacaggcacg
     1741 cggccacggt gagcgccgcg agggcgagga cggcggggat gaagacccgg gagacccggt
     1801 ccaccgtgcg ttccaggggg ctcttgctgg ccagggcgcc ctgcaccgac ttcacgatct
     1861 gggccaggg
//
LOCUS       DATGWW010000226         2209 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_426068, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000226 DATGWW010000000
VERSION     DATGWW010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2209
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426068"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1362
                     /locus_tag="VK150_03400"
     CDS             <1..1362
                     /locus_tag="VK150_03400"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HLP30381.1"
                     /translation="LKRPLAIKVVREGTGDTEVLQRFQREAEVSARLNHPNAVTVFDV
                     GEEPGLGPFLVMEYVDGERLSDLLKVGPIDPGQAAGLLIQAADALEAVHALGILHRDV
                     KPENFMVTRDGRMKLMDFGIARADGGRLTSTATFLGTPAYAAPDILNGAHASAAADRW
                     SFTLTAFEMLTGRLPFGGDSVGAVLYRIVHQEPAFPEDMAPEVREVFQRALQKDPAQR
                     FPDLRSFLRPLLEALPLEPETRRGYLAHLEAATTGRPRTTLRLTTALGIPASRLRWYW
                     AGGLLAVGLALGAVYFRSEPSRQLSIESRPAGAEVFLDGTPLGRTPLRQVVVKGQVTL
                     LRLEKPDYQPLEVRLKDEDRDLSLRLVPAPFEVSVVSEPPGAEVSLDGQVKGRAPLVV
                     QVPGEGPHTLRLALDGYQPWTMVPDRRKSPPDPIRLQKLRPLKPGQEDGKLKKFFKGI
                     FQK"
     gene            complement(1383..1874)
                     /gene="purE"
                     /locus_tag="VK150_03405"
     CDS             complement(1383..1874)
                     /gene="purE"
                     /locus_tag="VK150_03405"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HLP30382.1"
                     /translation="MSTAPLVGLIMGSRSDWETMEHTAETLKELGIPFEAEVVSAHRT
                     PDKLFKYCEKAESRGLRVIIAGAGGAAHLPGMAAAKTLIPVLGVPVQSKALNGMDSLL
                     SIVQMPAGIPVGTLAIGKAGAVNAALFAAAILAGTDQALLMRLKAYREAQAQKVLLND
                     RLP"
BASE COUNT          333 a          760 c          782 g          334 t
ORIGIN      
        1 ctcaagcgtc cgctggccat caaggtcgtg cgggagggca ccggcgacac ggaagtcctg
       61 cagcgcttcc agcgggaggc ggaggtctcg gcccgcctga accatcccaa cgccgtcacc
      121 gtcttcgacg tgggcgagga accggggctc ggccccttcc tggtcatgga gtacgtcgac
      181 ggcgagcggt tgtccgacct gctgaaggtc ggtcccatcg accccggtca ggccgcgggt
      241 ctcctgatcc aggccgccga tgcgctggag gcggtccatg ccctgggcat cctccaccgg
      301 gacgtcaagc ccgagaactt catggtcacc cgggacggtc ggatgaagct catggacttc
      361 ggcatcgccc gggcggacgg ggggcgcctc accagcaccg ccaccttcct gggaaccccg
      421 gcctacgccg cccccgacat cctcaacggc gcccacgcca gcgccgcggc cgaccgctgg
      481 tccttcaccc tcaccgcctt cgagatgctg accggccggc tgcccttcgg cggcgacagc
      541 gtgggggccg tgctctaccg catcgtccac caggagccgg ccttccccga ggacatggcc
      601 ccggaggtgc gggaggtctt tcagcgggcg ctccagaagg accccgccca gcgctttccg
      661 gatctccggt ccttcctgcg gcccctgctg gaggcgctgc ctctggagcc ggagacgcga
      721 cgggggtacc tcgcccacct ggaggccgcc accacggggc gcccgagaac caccctgcgg
      781 ctcaccactg cgctcggaat tccagcgtcc cggctgcggt ggtactgggc cggaggcctg
      841 ctggcggtgg gactcgccct cggcgccgtg tacttccggt cggagccgag ccgccagctc
      901 tccatcgaat cgcggcccgc gggagcggag gtgttcctgg atggcactcc tctgggccgc
      961 acgcccctcc gccaggtggt ggtcaagggc caggtaaccc tcctgcgcct tgaaaagcct
     1021 gattaccagc ccctggaagt tcgcctgaag gatgaggatc gtgacctctc gctccggctc
     1081 gtgcccgcgc ccttcgaggt ctccgtggtg agcgagccgc ccggggcgga ggtgagcctc
     1141 gacggccagg tcaaggggcg cgcgcccctg gtggtccagg ttcccggtga ggggccccac
     1201 accctgcggc tggcgctcga cggctatcag ccgtggacga tggttcccga ccggcgcaag
     1261 tcgccgcccg accccatccg cctgcagaag ctccggcccc tgaagcccgg gcaggaagac
     1321 ggcaagctga agaagttctt caaggggatc ttccagaaat agtcctggcg tcgcgccagg
     1381 gcctagggca gccggtcgtt gagcagcacc ttctgggcct gggcctcgcg gtaggccttc
     1441 agacgcatga gcagcgcctg gtcggtgccg gcgaggatgg cggcggcgaa gagcgcggcg
     1501 ttcacggccc cggccttgcc gatggccagg gtgcccacag ggatgcccgc gggcatctgg
     1561 acgatggaga gcagggaatc catgccgttc agggccttgc tctgcaccgg cacgccgagc
     1621 acggggatca gggtcttggc cgcggccatc ccgggcaggt gggcggcgcc gccggcaccg
     1681 gcgatgatga cgcgcaggcc ccggctctct gccttctcgc agtatttgaa cagcttgtcc
     1741 ggcgtgcggt gcgcgctcac cacctccgcc tcgaagggaa tgccgagctc cttcagcgtt
     1801 tcggccgtgt gctccatggt ctcccaatcc gagcgggaac ccatgatgag gccgacgagc
     1861 ggggcggtgg acatggacat tcctccaggc gaagtcggtc gagcggaagg tcggatcaga
     1921 ggcctgagcc agcgacgtcg gcgaagatga tgaggcctat cagcggggcg gtggacattg
     1981 agcgactcca agtctacaag tcccagtgta gacctggccc ggccatgatg gagggatggt
     2041 gaaggtcgtg gtggtgggcg gaggcgcggc ggggctggtg gcggcctggc gggcagcctc
     2101 gctgggccac gcggtgaccc tgctggaagc caacgggaag ctgggcgtga agctccgcat
     2161 cagcggcggc ggcaagtgca acatcaccca tgagggtccc ccgaaggcc
//
LOCUS       DATGWW010000227         1577 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_371692, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000227 DATGWW010000000
VERSION     DATGWW010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1577
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371692"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..896)
                     /locus_tag="VK150_03410"
     CDS             complement(<1..896)
                     /locus_tag="VK150_03410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30383.1"
                     /translation="MKSLTKYLPWGAFALALLIALVVALPGGKVRGFDVNTFGTLPIL
                     EGGRVKPLDSVARNSLLVIHSRQGFRHEGRAIGPDEWILDVMFRPKVADTQPIFVIDD
                     LEVLGLIGAKQTKNRNYFSFADLSSHLEEIQKQAMTAQPIPPQKRTRFQGAIVNLFDR
                     VYLYYKLRNTLQLAGSPGIAWELQSLGTPEAALRHQDLTSLAHFRILPPPAGAGPDAW
                     MSIGEGLTAANSGSGLHPGLVPMAKLNLAYVANDATAFNQALTEMKGVVTTLKPGALS
                     HAANEITFNRAQPFFVGLTIYF"
     gene            complement(899..>1577)
                     /locus_tag="VK150_03415"
     CDS             complement(899..>1577)
                     /locus_tag="VK150_03415"
                     /inference="COORDINATES: protein motif:HMM:NF016995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c biogenesis protein ResB"
                     /protein_id="HLP30384.1"
                     /translation="DTLLAKGDPIAIPGTPITVKVKKYFPNAELTTQVPGAQPSLATA
                     GVGTGVSVVGIPVVSADNEMNQTSAFVEFTAGGRSYGTWLASVALGAPQSFTHEGRTY
                     AISMRLRRQYLPYAFTLKQFRHDVYPGTQIAKNFSSLVQVVNPSRQESREVLIYMNQP
                     LRYEGKTFYQASFGKNDTLSILSVVENPGWLLPYVSCVLVSIGLLVHFAIVLRRSLKR
                     RQDQKEG"
BASE COUNT          251 a          452 c          611 g          263 t
ORIGIN      
        1 atgaaataga tcgtgaggcc cacgaagaag ggctgggccc ggttgaaggt gatctcgttg
       61 gcggcgtggc tgagggcgcc gggcttcagg gtggtcacca cgcccttcat ctcggtcagg
      121 gcctggttga aggcggtcgc gtcgttggca acgtaggcca ggttgagctt ggccatgggc
      181 accaggccgg gatggaggcc gctgccgctg ttggcggcgg tgaggccctc gccgatgctc
      241 atccaggcgt cgggccccgc gccggccggc ggcggcagga tgcggaagtg cgcgagcgag
      301 gtcaggtcct ggtggcgcag ggccgcctcg ggggtgccga gggactgcag ctcccaggcg
      361 atgccggggg aacccgccag ctgcagggtg ttgcgcagct tgtagtagag gtacacccgg
      421 tcgaacaggt tcacgatggc gccctggaac cgcgtgcgct tctgcggggg gatgggctgg
      481 gccgtcatgg cctgcttctg gatctcctcg aggtgcgagg agaggtccgc gaagctgaag
      541 tagttccggt tcttggtctg cttggcgccg atgaggccca gcacctcaag gtcatcgatg
      601 acgaaaatgg gctgcgtgtc ggccaccttc ggcctgaaca tcacgtcgag gatccactcg
      661 tcgggcccga tggcgcggcc ctcgtggcgg aagccctggc ggctgtggat caccagcagg
      721 gagttgcggg ccacggaatc cagcggcttg acgcggccgc cctccaggat gggcagggtg
      781 ccgaaggtgt tgacgtcgaa gccgcgcacc ttgccgccgg gcagggccac gacgagcgcg
      841 atgagcaggg ccagggcgaa ggcgccccag ggaaggtact tggtcaggct cttcatgttc
      901 agccctcctt ctggtcctgg cggcgcttga gggagcgccg gaggacgatg gcgaagtgca
      961 cgagcaggcc gatggagacc agcacgcagg acacatacgg gagcagccaa ccgggatttt
     1021 cgaccacgga caggatggac agcgtgtcgt tcttgccgaa gctcgcctgg tagaaggtct
     1081 tgccctcata ccgcagcggc tggttcatgt agatcagcac ttcccgggat tcctggcggg
     1141 aggggttcac cacctggacg aggctggaga agttcttggc gatctgggtg ccggggtaca
     1201 cgtcgtgccg gaactgcttg agggtgaacg cgtagggcag gtactggcgg cgcaggcgca
     1261 tggagatggc gtaggtgcgg ccctcgtggg tgaaggactg gggcgcgccc agggccacgg
     1321 aggccagcca ggtgccatag ctgcggccgc ccgccgtgaa ctccacgaag gcggaggtct
     1381 ggttcatctc gttgtcggcg gagaccacgg gaatccccac cacggacacg ccggtgccca
     1441 cgccggcggt ggccagggag ggctgggcgc cggggacctg ggtggtcagc tcggcgttgg
     1501 ggaagtactt cttcaccttc actgtgatgg gcgtgccggg gatggcgatg ggatcgccct
     1561 tggccagcag ggtgtcc
//
LOCUS       DATGWW010000228         2875 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_290968, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000228 DATGWW010000000
VERSION     DATGWW010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2875
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290968"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..887)
                     /locus_tag="VK150_03420"
     CDS             complement(96..887)
                     /locus_tag="VK150_03420"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HLP30385.1"
                     /translation="MADFDPWDPYRDLRFAGTREHPAHGPCFIAEGRILVEDLLQAGR
                     AGRVKVVSVAATTAAAAAVRDLLPEGTELLAADETALSALAGFPFHRGLMACAQVPAA
                     PPSPDLLKTRRLLVLPRLYDSENLGLLLRSAAALGLDGVLAGPGPGQWTRRTVRVSMG
                     AVWRIPVWREADPWALLAAWKEAGPGSEVVAAALSEQAEDARAWRPASRCALVLGPED
                     TGLEEAHLALCDRVVAIPMASGMDSLNVAAAGAILMFQMMVPAGP"
     gene            934..1839
                     /locus_tag="VK150_03425"
     CDS             934..1839
                     /locus_tag="VK150_03425"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HLP30386.1"
                     /translation="MPRKLSRHLTWLEAFVAAVETGSLEAAAQHLGVARSVVSEHLRA
                     LETSVAQGEALLERGPGRRLRLTARGERLFAAAQSPFHQLDLKRLRDLASPEPSLRLG
                     LNPTLSHLLLPEIAAEIAEAKIRLEASFGGAYELVRQVQTGQLDLALGFTPLPPHRGL
                     ETEVLASLPFVVLGAPGSGLAARRRRITVKELEGRPFVDWLRDDPYGGANSARFAEAG
                     IAVHEMARVESFLQLYPALRAFGACAIAPDLRPLAPFPEDLQVLALQEPVPQCVDLVA
                     LWPSDRAPTEAWRCLQRLRARLSGA"
     gene            complement(1836..>2875)
                     /locus_tag="VK150_03430"
     CDS             complement(1836..>2875)
                     /locus_tag="VK150_03430"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP30387.1"
                     /translation="VLAAVLMMASAHQAQTPPGNPLHTAFETIQTACVRGRGLIRRLL
                     DFARNQLEDVHPVDLNALVREEVELLGRTTLQKAEWVLDLDPALKQVKGDPSALGSAI
                     INLCVNSVDAMTRGGTVTLRTRRLEDGWTELAVIDNGEGMPPEVLARALDPFFTTKAA
                     GRGTGLGLSIVYSTMKAHGGTLEISSQQGQGQGTTVVLRFPPYELADGDRQAAQEEAR
                     VEIHHHVLLVDDDVLVREAMLPLLEGLGHTVTATASGQEALDQLEQGLPVDLAIVDQN
                     MPGLSGDETVVRMLQLRPDLPILMASGYLPASHLGEGAPWNHIPAIAKPFSRDELRQA
                     LEAIDQARRRR"
BASE COUNT          378 a         1056 c         1029 g          412 t
ORIGIN      
        1 ggttcgaggc catgggccct ccgcgcaacc ggttcccgga cctgagtgta ggtcccgacc
       61 ggttcctccg cccggccgga ctcagggttc tccttctagg gccccgccgg gaccatcatc
      121 tggaacatga ggatcgcccc ggccgcggcg acgttcaggc tgtccatgcc cgaggccatg
      181 gggatggcca ccacccggtc gcacagggcc aggtgcgctt cctccaggcc tgtatcctcc
      241 ggccccagca ccagggcgca gcgggaggcg ggacgccagg ccctcgcgtc ctcggcctgc
      301 tcgctgaggg ccgcggccac cacctccgag cccggcccag cctccttcca cgccgccagt
      361 agcgcccagg ggtcggcctc ccgccacacg ggaatgcgcc acacggcgcc catggaaacc
      421 cgcaccgtgc gccgcgtcca ctggcccggc cccggtcccg cgaggacccc gtccaggccc
      481 agcgccgccg cgctgcgcag cagcagcccg aggttctcgc tgtcgtagag ccgaggcagc
      541 accagcaggc gccgggtctt gagcaggtct ggcgagggcg gcgccgccgg cacctgagca
      601 caggccatga ggccccggtg gaagggaaag cccgccagag ccgacagggc ggtctcgtcg
      661 gcggccagca gctcggtgcc ctcggggagc aggtcgcgca cggccgcggc ggcggcggtg
      721 gtggcggcca cggacaccac cttgacccgg cccgcccggc ctgcctggag aaggtcctcc
      781 acgaggatcc gcccttcggc gatgaagcag gggccgtggg cgggatgctc ccgggtgccg
      841 gcgaagcgga ggtcgcggta ggggtcccaa ggatcgaagt cggccatggg aacagcgtag
      901 ccccggagtc ggaaatgcgg ttccatggga accatgcccc gcaaactgtc ccgccacctc
      961 acctggctcg aggccttcgt ggccgcggtg gagacggggt ccctggaggc cgccgcgcag
     1021 cacctgggcg tggcacgctc cgtcgtcagc gagcacctgc gggccctgga gacctccgtc
     1081 gcccagggcg aggcgctgct ggaacgcggg cccggccggc ggctgcggct cacggcgcgc
     1141 ggggagcggc tgttcgccgc ggcccagtcg cccttccacc agctggacct caagcgcctg
     1201 cgggacctgg cctcgccgga gcccagcctg cgcctcggcc tcaatcccac gctgtcccac
     1261 ctgctgctgc cggagatcgc ggcggagatc gcggaggcga agatccgcct ggaggccagt
     1321 ttcggcggcg cctacgagct ggtgcggcag gtgcagacgg gccagctgga cctggccctc
     1381 gggttcaccc ccctgccccc gcaccggggc ctggagacgg aagtgctcgc cagcctgccc
     1441 ttcgtggtgc tgggcgcgcc gggcagcgga ctggcggccc ggcggcggcg gatcacggtg
     1501 aaagagctcg agggccggcc cttcgtggac tggctgcgcg acgatcccta cggcggcgcc
     1561 aattcggccc ggttcgccga ggccggcatc gcggtgcacg agatggcgcg ggtggagagc
     1621 ttcctgcagc tctacccggc cctgcgggcc ttcggtgcct gcgccatcgc cccggatctc
     1681 cggcccctgg cgccctttcc ggaggacctg caggtgctgg cgctgcagga gccggtgcct
     1741 cagtgcgtgg acctggtggc cctctggcct tccgaccggg cccccaccga agcctggcgc
     1801 tgcctccagc gcctgcgggc acggctctcc ggcgcctagc ggcggcgccg ggcctggtcg
     1861 atggcttcca gggcctgccg cagttcatcc cgggagaagg gcttggcgat ggctggaatg
     1921 tggttccagg gcgccccctc gccgaggtgg ctcgccggaa ggtagccgct ggccatcagg
     1981 atgggcaggt ccggcctcag ctgcagcatc cggaccacgg tctcgtcccc gctgaggccc
     2041 ggcatgttct ggtccacgat cgcgaggtcc acgggcagac cctgctcgag ctggtcgagg
     2101 gcctcctggc cggaggcggt ggccgtcacg gtgtgtccga gcccctcaag cagcggcagc
     2161 atggcctcgc gcacgaggac gtcgtcgtcc acgaggagga catggtggtg gatctcgacc
     2221 ctggcctcct cctgcgccgc ctggcggtcg ccgtccgcca gctcgtaggg cgggaagcgg
     2281 aggaccaccg tggtcccctg tccctgtccc tgctggctgc tgatctccag cgtcccgcca
     2341 tgggccttca tcgtgctgta gacgatcgag agcccgagcc ctgtcccccg cccggccgcc
     2401 ttggtggtga agaagggatc gagggcccgc gccaagacct cgggcggcat cccttcccca
     2461 ttgtcgatga ccgccagctc cgtccagccg tcctccagcc gccgggtacg cagggtcacc
     2521 gtcccaccgc gggtcatggc gtcgacggag ttgacgcaga ggttgatgat cgcactgccc
     2581 agggccgagg gatcgccttt cacctgcttc aacgcgggat cgagatccag cacccactcg
     2641 gccttctgca gcgtggtgcg gccgaggagc tccacctctt cccggaccag ggcgttcaga
     2701 tctacggggt ggacatcctc cagctggttg cgcgcgaagt cgaggagcct ccggatgagc
     2761 ccccgccccc tcacgcaggc ggtctggatg gtctcgaaag ccgtgtggag ggggttcccg
     2821 ggcggggtct gtgcctggtg cgccgaggcc atcatcagca cggcggccag cacgt
//
LOCUS       DATGWW010000229         1635 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_64277, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000229 DATGWW010000000
VERSION     DATGWW010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64277"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..890
                     /locus_tag="VK150_03435"
     CDS             <1..890
                     /locus_tag="VK150_03435"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HLP30388.1"
                     /translation="IAGVLLLWASAFAGIRAGMRLTPGGAPGPDGYGPGELALLRFGT
                     ASVVLILFALATRMKLPDRADLPKIALAGFLGITVYHVALNFGEVTVQAGAASLLISA
                     GPVFVAILSTFLLHERLTWLGWVGILLAFAGVGLIAVSGGKGLRFTPGSLLILLSAVV
                     TAGFSILSKKSLGRYTAIQFTSYAIWAGTIPLFIFLPGLLRQAPHAAPAATVAVVYLG
                     IFPAAIAYVLWNHALSKMPATLLSSFLYLSPVIAIAIAWVWLREVPALLTFVGGAIAI
                     VGVILVQTRGTARAVQART"
     gene            complement(887..1243)
                     /locus_tag="VK150_03440"
     CDS             complement(887..1243)
                     /locus_tag="VK150_03440"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HLP30389.1"
                     /translation="MIRKDADLVGEVKANIRGGLGSALDTSLLKAGEMHGVLSLGRVT
                     LEPGATIGEHAHPNTEDLYLILEGHGIGILNGARFPVGPGDLFLVKAGGNHGLINDSD
                     QPLTFLGLLTRSEEPA"
     gene            complement(1240..>1635)
                     /locus_tag="VK150_03445"
     CDS             complement(1240..>1635)
                     /locus_tag="VK150_03445"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HLP30390.1"
                     /translation="PLTFQRPTPGELTASFGLRRIFNGLPRSPHAGLDIRAPQGQAVR
                     APAAGTVVLTGDFFYSGNAVFIAHGEGVVSLLCHLSKITVKQGQTVAAGDLVGEVGQT
                     GRASGPHLHWSLSLNNARVDPRIFLRREP"
BASE COUNT          197 a          617 c          542 g          279 t
ORIGIN      
        1 ccatcgccgg cgtgctgctg ctctgggcct cggcctttgc gggcatccgc gcgggcatgc
       61 gcctcacgcc cggcggcgcg cccggccccg acggctacgg ccccggggag ctggccctgc
      121 tgcgcttcgg caccgcctcc gtggtgctca tcctcttcgc cctggccacc cgcatgaagc
      181 tgccggaccg cgcggacctg ccgaaaatcg ccctcgcggg cttcctcggc atcaccgtct
      241 accacgtggc cctcaacttc ggcgaggtca ccgtccaggc cggcgccgcg tcgctgctga
      301 tctcggccgg gccggtgttc gtggccatcc tctcgacgtt cctcctgcac gagcgcctca
      361 cctggctcgg ctgggtcggc atcctgctgg ccttcgccgg cgtgggattg atcgcggtga
      421 gcggcggcaa gggcctgcgc ttcacgccgg gttccctgct catcctgctc tcggcggtgg
      481 tcaccgccgg attttccatc ctgtccaaga agagcctggg ccgctacacg gccatccagt
      541 tcaccagcta cgccatctgg gccggcacga tccccctgtt cattttcctg cccggcctgc
      601 tccgccaggc gccccacgcc gcgccggccg ccaccgtcgc cgtggtctac ctcggcatct
      661 tccccgccgc catcgcctac gtgctgtgga accacgcgct ctcgaagatg cccgccaccc
      721 tgctttccag cttcctgtac ctgtcgccag tgatcgccat cgccatcgcc tgggtgtggc
      781 tgcgcgaggt cccggccctg ctcaccttcg tgggcggcgc catcgccatc gtcggcgtga
      841 tcctggtgca aacccgcggc acggcccggg cggtccaggc ccgaacctag gccggttcct
      901 ccgaccgcgt gagcaggccc aggaaggtga ggggctggtc cgagtcgttg atgagaccgt
      961 ggttcccgcc ggccttcacc aggaacaggt cgccgggccc cacgggaaac cgcgcgccgt
     1021 tcaggatgcc gatgccgtgg ccctcgagga tcaggtagag gtcctcggtg ttggggtggg
     1081 cgtgctcgcc gatggtggcc cccggttcca gcgtgacccg gcccaggctg aggacgccgt
     1141 gcatctcgcc cgccttcagg aggctcgtgt ccagggccga gcccaggccc ccgcggatgt
     1201 tcgccttcac ctcgcccacc aggtcggcgt cttttcggat catggttccc tccgaaggaa
     1261 gatccgggga tccacccgcg cgttgttgag gctcagcgac cagtgcaggt gcggcccgga
     1321 ggcgcggccc gtctgcccca cctcgcccac caggtcgccg gcggcgacgg tctggccctg
     1381 tttcacggtg atcttcgaca ggtggcagag caggctcacc acgccttcgc catgggcaat
     1441 gaacacggcg ttgccgctgt agaagaagtc gcccgtcagc accaccgtgc ccgccgcggg
     1501 ggcccgcacg gcctggccct ggggggcccg gatgtccagg cctgcatggg gcgagcgcgg
     1561 gaggccgttg aagatccggc gcaggccgaa ggaggccgtc agctcgccgg gcgtcggcct
     1621 ctggaacgtc agggg
//
LOCUS       DATGWW010000230         2039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_64330, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000230 DATGWW010000000
VERSION     DATGWW010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64330"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="VK150_03450"
     CDS             <1..271
                     /locus_tag="VK150_03450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30391.1"
                     /translation="AVDAIQIPASAAGPVGWFVGVGLDVATMAAMWALLGFHWAFLPS
                     FLTEWIPYLDMAPIWTLAVAIATRGRSSLQAPDNPLPERRSTLPP"
     gene            complement(284..700)
                     /locus_tag="VK150_03455"
     CDS             complement(284..700)
                     /locus_tag="VK150_03455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30392.1"
                     /translation="MKARWLTPAPIFACLLASASQSPEAASPVDIGAEPTAAEALQYS
                     RIWASKAKLGKSSNLAKVTVVGPVRWHAALTARWPEGKDGKVLEGWLISFEEKPNWGL
                     NPYAHPRKVEILVDKDKVVHWRTQMEWDTRNREVRP"
     gene            complement(769..1572)
                     /locus_tag="VK150_03460"
     CDS             complement(769..1572)
                     /locus_tag="VK150_03460"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLP30393.1"
                     /translation="MSGSANHISVSGVHKVFQSGGQDVYALKAIDLEIARGEFVCLLG
                     PSGCGKSTLLNAVAGFSLPSSGAITVEGQAITTPGPDRGMVFQEYALFPWMTVEQNIA
                     FGLQIKGAAKPVIQEKVDSLLGLLHLQDFRKRYPKDLSGGMRQRVAIARVLALDSPIM
                     LMDEPFGALDALTRRNLQDELLRLWLELKKTILFVTHSIEEALYLADRTVVMTYRPGT
                     IKRDLKVDLPRPRDVASPAFNALKKELSQLLMEEQSRHNQDEFKGAAVD"
     gene            complement(1569..>2039)
                     /locus_tag="VK150_03465"
     CDS             complement(1569..>2039)
                     /locus_tag="VK150_03465"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLP30394.1"
                     /translation="LRPIPPIAYIPLSILWFGLGNPPAVFLISIGAFFPVLMNTVAGV
                     QNVDSIYLRVGRNLGASRFTQFTRIILPAATPYIFTGARIAMGTAFIVVIVSEMIAVN
                     NGLGYRILEAREYLWSDKIIAGMFTIGLLGLGIDTVMSRLSTYLLKWHRGLEQG"
BASE COUNT          323 a          639 c          704 g          373 t
ORIGIN      
        1 ggcggtggac gccatccaga tcccggcgag cgccgcgggg cccgtgggct ggttcgtggg
       61 cgtcggcctc gacgtggcca ccatggccgc gatgtgggcc ctgctgggct tccactgggc
      121 cttcctgccc tccttcctca ccgagtggat tccctacctg gacatggccc cgatctggac
      181 cctggccgtc gccatcgcca cccgggggcg gagctccctg caggcaccgg acaacccgct
      241 gccggaacgg cggtcgaccc tgcctccttg aagcgtccag atcctaggga cggacttccc
      301 gattcctcgt atcccactcc atctgggtgc gccagtgcac caccttgtcc ttgtccacca
      361 ggatctcgac cttcctgggg tgagcgtagg ggttcagtcc ccagttcggt ttctcttcga
      421 aggaaatcag ccatccctcc agaaccttgc cgtccttccc ttccggccac cgggccgtga
      481 gggcggcatg ccaacgaacc gggcctacga ccgtcacttt tgccagattc gagctctttc
      541 ccagtttggc cttgctcgcc cagattcgtg aatactggag cgcctccgct gcggtcggct
      601 ccgctccgat gtcaacggga gaggcagctt caggggactg gctggcactg gccagcaagc
      661 aggcgaagat gggagcaggt gtgagccatc gggccttcat gggttctcca tggatacatg
      721 gtgaatgtgg tggcaatcgt cggtttcgat cagacgacca tcgagggctc aatccaccgc
      781 ggcgcccttg aactcgtcct ggttgtggcg gctctgctct tccatgagga gctggctcag
      841 ttccttcttc agggcgttga aggcggggct ggccacgtcg cgggggcgag gcaggtccac
      901 cttcaggtcg cgcttgatgg tgccgggccg gtaggtcatc accaccgtgc ggtccgccag
      961 gtagagggcc tcctcgatgc tgtgggtgac gaagaggatg gtcttcttca gctccagcca
     1021 caggcgcagc agctcgtcct ggaggttgcg gcgggtgagg gcgtcgaggg cgccgaaggg
     1081 ctcgtccatg agcatgatgg gcgaatccag ggccagcacc cgggcgatgg ccacgcgctg
     1141 ccgcatgccg ccgctcaggt ccttggggta gcgcttccgg aaatcctgga ggtgcagcag
     1201 gcccaggagg ctgtccacct tctcctggat gacgggcttc gccgcgccct tgatctgcag
     1261 gccgaaggcg atgttctgct cgacggtcat ccaggggaag agggcgtact cctggaagac
     1321 catgccgcgg tcgggacccg gggtcgtaat ggcctggccc tccacggtga tggcgccgga
     1381 gctgggcagg ctgaagcccg ccacggcgtt cagcagggtg gatttgccgc agccggaggg
     1441 gcccagcagg cagacgaact cgcctcgggc gatttccagg tcgatggcct tgagggcgta
     1501 gacatcctgg ccgccactct ggaagacctt gtgcacgccg ctgacggaga tgtggttcgc
     1561 gcttccgctc atccctgctc cagaccccgg tgccacttca gcaggtaggt gctgaggcgg
     1621 ctcatgaccg tgtcgatgcc caggcccagg aggccgatgg tgaacatgcc cgcgatgatc
     1681 ttgtcggacc agaggtactc gcgggcttcg aggatgcggt agcccaggcc gttgttcacg
     1741 gcgatcatct cggagacgat caccacgatg aaggccgtgc ccatggcgat gcgcgccccg
     1801 gtgaagatgt agggcgtggc cgccggcagg atgatgcggg tgaactgggt gaagcgcgag
     1861 gcccccaggt tgcggcccac gcggaggtag atgctgtcca cgttctgcac gccggccacg
     1921 gtgttcatga gcacggggaa gaaggcgccg atgctgatga ggaacaccgc cggcgggttg
     1981 cccaggccga accagaggat ggacagcggg atgtaggcga tgggcgggat gggccgcaa
//
LOCUS       DATGWW010000231         2187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_64366, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000231 DATGWW010000000
VERSION     DATGWW010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64366"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..587
                     /locus_tag="VK150_03470"
     CDS             <1..587
                     /locus_tag="VK150_03470"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HLP30395.1"
                     /translation="FYPTKNLGAFGDAGMTAIRDDAALGARVRRIRVHGMEPVYMHHE
                     VGMNGRMDEFQALVLRAKLPMLDGWHEGRRRHAAWYLDRMAALAADEAVLPREVVPEG
                     RHIYNQFTIRVKDGKRDALQAHLKARGIGSAIYYPICLHEQPCFKDLGYKAGQLPESE
                     LAAQEVLSLPVYPEMTEAMREEVAAAILGFFGKK"
     gene            complement(720..1100)
                     /locus_tag="VK150_03475"
     CDS             complement(720..1100)
                     /locus_tag="VK150_03475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HLP30396.1"
                     /translation="MSTQADRRDTRRIVVGPEFAISFTLKGHGYRDVRITNLSPGGCF
                     AMVGARDARLFERGAVLEGLTLLHPELPKAPIMATVSYVLGGRPGHDPMEMVGVGIQF
                     LGMADAAHEALDTWIEAALASQQG"
     gene            1310..1762
                     /gene="rplI"
                     /locus_tag="VK150_03480"
     CDS             1310..1762
                     /gene="rplI"
                     /locus_tag="VK150_03480"
                     /inference="COORDINATES: protein motif:HMM:TIGR00158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HLP30397.1"
                     /translation="MEILLIENVPHLGVRGDVVNVKDGYARNFLLPRKMALPVTAGNK
                     RQIELEKVRAEKLRAKELADAKSLAEKLEAISLAVAKKAGENGHLFGSVTNADVAELF
                     KGKGFTLDRRDITVPHIKDAGTYVVDVRLYSGVHAKVNLEVSAAATAE"
     gene            1871..2170
                     /locus_tag="VK150_03485"
     CDS             1871..2170
                     /locus_tag="VK150_03485"
                     /inference="COORDINATES: protein motif:HMM:NF037081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HLP30398.1"
                     /translation="MAKTTAKPDTLGIAELAATLAEAQDLSKARAKSILDGVRDHIVE
                     TLLTGNRVNLFGLGTFEVRATKEKMGRNPKTGESIQIPAGRKVVFKTAKGLKDQM"
BASE COUNT          402 a          786 c          687 g          312 t
ORIGIN      
        1 gcttctaccc gaccaagaac ctcggcgcct tcggcgacgc gggcatgacg gccatccgcg
       61 atgacgcggc gcttggcgcc cgggtgcgcc gcatccgcgt ccacggcatg gagccggtct
      121 acatgcacca tgaggtgggc atgaacgggc gcatggacga gttccaggcc ctggtgctgc
      181 gggccaagct gcccatgctc gacggctggc acgaaggccg ccgccggcat gcggcctggt
      241 atctcgaccg catggccgcc ctcgcggccg acgaggcggt gctgccccgc gaggtggtgc
      301 ccgagggccg ccacatctac aaccagttca ccattcgcgt gaaggacggc aagcgcgacg
      361 ccctgcaggc ccacctgaag gcgcggggca tcggcagcgc catctactac cccatctgcc
      421 tccatgagca gccctgcttc aaggacctcg gctacaaggc cggccagctg ccggaatccg
      481 agctcgccgc tcaggaagtg ctcagcctgc ccgtctaccc cgagatgacc gaggccatgc
      541 gcgaagaagt cgccgcggcc atcctgggct tcttcggcaa gaagtagcct tctcccaccg
      601 acgagcccga ggcgggccgg acgggttcac cccggccggc ctgcgggggc ccgggaggac
      661 gtcgcgagcc agaggcgagc aggtggtccc cccgcagcat caacgcccct cggacagccc
      721 tacccctgct gggaggccag ggcggcctcg atccaggtgt ccagggcctc gtgggcggcg
      781 tcggccatgc ccaggaactg gatgcccacc cccaccatct ccatgggatc gtggccggga
      841 cgtccgccca gcacgtagga caccgtggcc atgatcggag ccttgggcag ctccgggtgg
      901 agcagggtga gcccctccag taccgcgccc cgttcgaaca ggcgcgcgtc ccgggccccc
      961 accatggcga aacagccgcc ggggctcagg ttggtgatcc gcacgtcccg gtagccatgg
     1021 cccttcaacg tgaaggagat ggcgaattcg ggacctacga cgatgcgccg ggtatcgcgt
     1081 cggtccgcct gggtgctcat tcggtctcca tgaagtagga aatccttgct tgggtatcgg
     1141 gcccctccac gatagactgg attttctgat tggcctgaac ccatcggggg acagggcgga
     1201 ttcccgagga tccgaccctg acggcgcaag acgccgtctc acccacgcgg ggacaccgcg
     1261 agcaagctgc gctggccgaa cccaacccaa atcttttcct ggagttccca tggaaatcct
     1321 cctgatcgag aacgtgcccc acctgggcgt ccgtggcgac gtcgtgaacg tcaaggacgg
     1381 ctacgcccgc aacttcctgc tgccccgcaa gatggccctg cccgtgaccg cgggcaacaa
     1441 gcgccagatc gagctcgaga aggtgcgcgc cgagaagctc cgcgccaagg aactggccga
     1501 tgccaagagc ctcgccgaga agctcgaggc catcagcctc gctgtggcca agaaggcggg
     1561 cgagaacggc cacctcttcg gttccgtcac caacgccgac gtggccgagc tcttcaaggg
     1621 caagggtttc accctcgacc gccgcgacat caccgtgccc cacatcaagg atgccggcac
     1681 ctacgtggtg gatgtgcgcc tctacagcgg cgtgcacgcc aaggtcaatc tggaagtcag
     1741 cgccgccgcg acggccgagt aagcgaccgc caaccccatc ccacacgtgg ccagcccctg
     1801 cggggatgct ggtcgcaccg gggttcgcgt gtcatcggga atcccgtcca tcccatcaag
     1861 gagcccttcc atggcgaaga ccactgccaa gcccgatacc ctcggcatcg ctgaactcgc
     1921 tgccaccctc gcggaggccc aggacctgtc caaggcccgc gccaagtcca tcctcgacgg
     1981 cgtccgcgac cacatcgtcg agaccctcct caccggcaac cgcgtcaacc tcttcggcct
     2041 cggcaccttc gaagtgcgcg cgaccaagga gaagatgggc cgcaacccca agaccggcga
     2101 gagcatccag atccccgccg gccgcaaagt cgtcttcaag acggcgaagg gcctcaagga
     2161 ccagatgtaa ggatcgttag agcacga
//
LOCUS       DATGWW010000232         1515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_64515, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000232 DATGWW010000000
VERSION     DATGWW010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64515"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..613
                     /locus_tag="VK150_03490"
     CDS             <1..613
                     /locus_tag="VK150_03490"
                     /inference="COORDINATES: protein motif:HMM:NF013214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HLP30399.1"
                     /translation="YTLLSATLLFSALTAGISMVVNPPYFVSFICSLAAFGLVWFVLP
                     RTANSAKGLGVVFGMTGLLGFGLGPVLNMYLHLPNGTLIIMEAMGLTGAIFLGLSAYV
                     LTTRKDFSFMGGFLMAGMLVAFGAGLVVMVAALFGYPMPGVSLAISAMVALLMAGMIL
                     YETGNIVNGGETNYILATVGLYLSIYNLFLALLQLLGVANSDD"
     gene            complement(698..>1515)
                     /gene="mltG"
                     /locus_tag="VK150_03495"
     CDS             complement(698..>1515)
                     /gene="mltG"
                     /locus_tag="VK150_03495"
                     /inference="COORDINATES: protein motif:HMM:TIGR00247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HLP30400.1"
                     /translation="LGKYEYLNPRVQAGTYRIARGTTPTMLLMQIIEGRVAQYSITLV
                     EGWNIYQVMDRLAQSNDLKHLLRGQNLAQVMTRIGHPGEHPEGRFFPETYDFPKGLSD
                     IAFLQRAYKMMDERLAVEWEHRDPGLPYRNAYEALIMASIVEKETGQAIERPQIAGVF
                     VRRLQKRMLLQTDPTVIYGLGPTFDGNLRRRDLLADNPYNTYRKQGLPPTPIAMPSAE
                     AIHAALHPAPGKDLYFVARGDGSHYFSATLAEHNAAVIRFQLHGQARPFSSSQ"
BASE COUNT          225 a          491 c          493 g          306 t
ORIGIN      
        1 ctataccctg ctgtcagcca ccctgctctt cagcgcgctc actgcgggca tttccatggt
       61 ggtcaacccg ccctacttcg tgagcttcat ctgctccctg gcggcttttg ggctcgtctg
      121 gttcgtcctt ccccgcaccg ccaactcggc caagggcctg ggcgtggtct tcgggatgac
      181 cgggctgctc gggttcggcc tgggtccggt cctgaacatg tacctccacc tgcccaacgg
      241 caccctgatc atcatggagg ccatgggcct cacgggggcg atcttcctgg gtctttccgc
      301 ctacgtgctg accacccgca aggacttcag cttcatgggc ggcttcctca tggccggcat
      361 gctggtggcc ttcggcgccg gcctggtggt gatggtggcg gccctgttcg gctaccccat
      421 gcccggcgtc tccctggcca tctcggccat ggtggccctg ctcatggccg gcatgatcct
      481 ctatgagacc ggcaacatcg tgaacggcgg cgagaccaac tacatcctcg ccaccgtggg
      541 cctctacctc tccatctaca acctgttcct ggccctgctc cagctcctgg gcgtcgccaa
      601 cagcgacgac tagtcacacc ccaccccaac gaaaaacccc ggcctcgtgc cggggttttc
      661 gtttgcaggg cgccgtcccg gcgcgaggcg gtgagggcta ctggctcgaa gagaagggcc
      721 tggcctgtcc gtggagctgg aagcggatca ctgcggcatt gtgctcggcc agggtggcgg
      781 agaaatagtg gctgccgtct cccctggcca cgaagtagag gtccttcccg ggggcgggat
      841 ggagcgcagc atggattgcc tccgcactgg gcatggcgat gggggtcggc ggcagcccct
      901 gcttccggta ggtgttgtag ggattgtcgg ccagcaggtc acggcggcgg agattgccgt
      961 cgaaggtggg ccccaggccg tagatgacgg tcggatcggt ctgcagcaac atgcgcttct
     1021 ggaggcgacg cacgaagaca ccggcgatct gcggccgctc gatggcctgc cccgtctcct
     1081 tttcgacgat ggaggccatg atgagggcct catacgcgtt ccggtaaggg aggccggggt
     1141 cacggtgctc ccattccacg gcaaggcgct catccatcat tttgtaggcg cgttgcagga
     1201 aggcgatgtc tgagagcccc ttggggaagt cataggtctc cgggaagaag cgcccctcgg
     1261 ggtgctcgcc ggggtggccg atgcgggtca tcacctgggc caggttctgg ccgcgcagca
     1321 ggtgtttcaa atcgttgctc tgggccagac ggtccatcac ctgatagatg ttccacccct
     1381 ccaccagcgt gatgctgtat tgggccacgc ggccctcgat gatctgcatc agcagcatgg
     1441 tgggcgtcgt gccgcgcgcg atccggtagg taccggcctg cacccgcgga ttgagatatt
     1501 cgtacttgcc gagcc
//
LOCUS       DATGWW010000233         2646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_105864, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000233 DATGWW010000000
VERSION     DATGWW010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2646
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105864"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1229)
                     /locus_tag="VK150_03500"
     CDS             complement(<1..1229)
                     /locus_tag="VK150_03500"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HLP30401.1"
                     /translation="MQVGRFRIESLLGTGGMGEVYRAWDATLERSVALKALRAGEERE
                     AGAPERFRREALALAQLNHPNVCQVHDWVDTPGGTFIAMELVEGRTLDQAAPDLKLRD
                     KLQVIRQVALALEAAHAKGLVHRDLKPGNIMVAKGPHEQAPKVKVLDFGLARLVDPQG
                     PHDALVTPPAVPNLALLQALEAEGRDTVPGRKEGSGPHSWDRLTQAGTFMGSPSYASP
                     EQIQGQAAGSSSDVFSLGIVAWELLAGDHPFPGEGRARMRAIIEGARRELKVRGLPGG
                     TADLLRAMLQAHPFKRPTASQVAKTLEQLLRPRLLLRWSAISVAGALLLAGGVNWFLG
                     RGIIADLTRQRPARVAVLPFVNSSGDPQMDTLARLILPEMLETSLREHPKLAPLDAES
                     VAKARAALRLDAGQLPAP"
     gene            complement(1375..>2646)
                     /locus_tag="VK150_03505"
     CDS             complement(1375..>2646)
                     /locus_tag="VK150_03505"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30402.1"
                     /translation="VSRAPLAAPGASASLLKIFSARAAGELERRRSEDARLVLERQMQ
                     HAQKLESLGVLAGGIAHDFNNLLTAMLGHMNVAQMKLAPESPALPHLESLERIIHRAA
                     DLTRQMLAYSGKGRFVVRSYDLNHVVQEVTHLLEVSIQKKIALRFDLAPDLPHVEADA
                     AQIQQVIMNLVTNAADAIGDREGTIRLSTSTLDLDRAYLDQVFQGQDLAPGAYVTLEV
                     SDTGCGMTPEVLDRIFEPFFTTKVAGRGLGLSATMGILKGHRAGMRIYSEPGRGTTFK
                     LLFPTSEARRVEESIQVAAPALARKATVLLVDDEEMIREAAAAVLESLGLSVVTAADG
                     LEAVEAVKRADLQVDVVLMDLTMPHMDGREAFQVIRRLQPDLPVILSSGYNEQESIRE
                     FTGRNLAAFLQKPYTLKSLERTVLEVLAKRP"
BASE COUNT          366 a          892 c          973 g          415 t
ORIGIN      
        1 ggggcgggca gctggccggc gtccagtcgc agggcggcgc gggcctttgc cacgctctcc
       61 gcgtcgaggg gggccagctt cgggtgctcg cggagggagg tctccagcat ctcgggaagg
      121 atgagccgcg cgagggtatc catctgcggg tcccccgaac tgttcacgaa gggcagcacc
      181 gccacccggg cggggcgctg gcgggtgagg tcggcgatga tgccccggcc caggaaccag
      241 ttcacccccc cggcgaggag cagggcgccc gccaccgaaa tggccgacca gcgaagcagc
      301 agcctgggac gcaggagctg ctcgagggtc ttcgccacct ggctggcggt gggccgcttg
      361 aaggggtggg cctgcagcat ggcgcgcaga aggtcggcgg tgccgccggg cagcccgcgg
      421 accttgagct cccgtcgcgc gccctcgatg atggcccgca tgcgggcccg gccctcaccg
      481 gggaagggat ggtcgcccgc aagcagctcc caggcgacga tgccgaggga gaacacgtcg
      541 ctcgacgagc ccgccgcctg gccctggatt tgctcgggcg aggcgtagct tgggctgccc
      601 atgaaggtgc cggcctgggt gagccggtcc cagctgtggg gcccggaacc ctccttccgg
      661 cccggcacgg tgtcccggcc ttccgcctcc agggcctgca gcagggccag gttcggcacc
      721 gcgggtgggg tgacgagggc gtcatggggc ccctggggat ccaccaggcg ggcgaggccg
      781 aaatccagca ccttcacctt cggcgcctgc tcatgggggc ccttggccac catgatgttg
      841 ccgggcttca ggtcccggtg gaccaggccc ttcgcatggg ccgcctcgag ggccagggcc
      901 acctggcgga tcacctggag cttgtcgcgc agcttgagat caggcgctgc ctgatcgagg
      961 gtgcggccct ccacgagttc catggcgatg aaggtgccgc cgggcgtgtc cacccagtcg
     1021 tgcacctggc agacattggg atggttcagc tgagccaggg ccagggcttc gcggcggaag
     1081 cgctccgggg cgccggcctc gcgctcctcg ccggcccgca gggccttcag cgcgacgctg
     1141 cgttccaggg tggcgtccca ggcgcggtag acctcgccca tgccaccggt gcccagcagc
     1201 gattcgatcc ggaaccggcc cacctgcacg ccgggttcca ggatctgcct cccgggaggg
     1261 agggcaggcg caggctggga tccattggac attttgcacc gggctttttt tttaccttac
     1321 cacgcggcag ccgattccca cccgtccctg gggccaggtt tcccgccccg gggctcaggg
     1381 gcgcttggcc agcacttcca ggaccgtccg ctccagggat ttgagcgtgt agggcttctg
     1441 gaggaaggcc gccaggttgc ggcccgtgaa ttcccggatg gattcctgct cgttgtagcc
     1501 gctgctgagg atcaccggca ggtcgggctg gaggcggcgg atgacctgga aggcttcgcg
     1561 cccgtccatg tggggcatgg tcaggtccat gagcaccacg tccacctgca ggtccgcccg
     1621 cttcaccgcc tccacggctt ccaggccatc ggcggcggtg accacggaga ggcccaggga
     1681 ttccaacacc gccgcggcgg cttcgcggat catctcctcg tcgtccacca gaagcaccgt
     1741 ggccttacgg gccagggccg gcgcggcgac ctggatggat tcctccaccc gccgggcttc
     1801 ggaggtgggg aagaggagct tgaacgtggt gccccgcccc ggctcgctgt agatgcgcat
     1861 gccggcccgg tggcccttga ggatgcccat ggtggccgag aggcccaggc cccggcccgc
     1921 caccttggtg gtgaagaagg gctcgaagat ccgatccagc acttccggcg tcatgccgca
     1981 gccggtgtcg ctcacttcca gcgtgacata ggcccccggg gcgaggtcct ggccctggaa
     2041 gacctggtcg aggtaggcgc ggtcgaggtc cagggtgctg gtgctgaggc ggatggtgcc
     2101 ctcccggtcg ccgatggcgt cggcggcgtt ggtcaccagg ttcatgatca cctgttggat
     2161 ctgggccgcg tccgcctcca cgtgcggcag gtccggcgcc aggtcgaagc gcagggcgat
     2221 cttcttctgg atggagacct cgaggaggtg ggtcacctcc tgcaccacat ggttcaggtc
     2281 ataggagcgc accacgaaac gccccttgcc cgaatacgcg agcatctgcc gcgtgaggtc
     2341 ggcggcccgg tggatgatgc gctcgaggct ctccaggtgc ggcagggcgg gggactcggg
     2401 cgcgagcttc atctgcgcca cgttcatgtg gcccagcatg gcggtgagca ggttgttgaa
     2461 gtcgtgggcg atgccccccg ccagcacgcc gaggctctcc agcttctggg cgtgctgcat
     2521 ctggcgctcc agcaccagtc gcgcgtcctc gctgcggcgc cgctccagct cgccagcggc
     2581 ccgggcggag aagatcttca gcagcgaggc ggaggccccc ggggccgcga ggggggcgcg
     2641 tgagac
//
LOCUS       DATGWW010000234         1829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_17884, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000234 DATGWW010000000
VERSION     DATGWW010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17884"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1612
                     /locus_tag="VK150_03510"
     CDS             <1..1612
                     /locus_tag="VK150_03510"
                     /inference="COORDINATES: protein motif:HMM:NF012973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA];
                     GO_process: GO:0071978 - bacterial-type
                     flagellum-dependent swarming motility [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HLP30403.1"
                     /translation="AGIIDDREAKARRQGLEKEAEFFGAMDGASKFVRGDAVAGIIIT
                     VVNVIGGFIVGMTMHGMSFQQSISTFTILTIGDGLVTQTPALMISTASGIIVARAASK
                     QNLGEEVMAQLTQNVKSLYTGAGFMLVSSAIPGMPTVPFLILGCAVGALGYSIQRKGK
                     AEKIEAAAKEKKAAAAKDEAAPQDKIESYLQVDQMELEIGYGLISLVDVNQGGDLLER
                     ITMLRRQCATEIGIIVPPIRIRDNIQLKANQYVVKIKGIEVGGGELMAGCFLAMDPGG
                     TSTRIQGIPTVEPAFGLPAIWITQSQKETADIAGYTVVELPAVIATHLTEIIRGHDGE
                     ILTRQDVKSLVDNIKTVNATVVEELVPGLLSIGEVQRVLINLLNEKIGIRDLGTVLEA
                     LANAAKVSKSEAYLTEQCRQSLSRQICKGFKDAAGVIHVISLEPKLEQMLEASLQNTE
                     RGPRLVIRPELVGRMVGRLTALVERMMAGNMQPVLLCSPGIRYQLRRILEGSFPNLAV
                     LSYSEIANGVNVKAAGTVVLNENEGGSQ"
     gene            1615..>1829
                     /locus_tag="VK150_03515"
     CDS             1615..>1829
                     /locus_tag="VK150_03515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30404.1"
                     /translation="MKTFQADTMQEALARVKDEMGPDAVILKSRKATRKLNGKTVPCF
                     EVTAALEENLFARPDAQARSTAPDRGAP"
BASE COUNT          363 a          629 c          563 g          274 t
ORIGIN      
        1 ggccggcatc atcgacgacc gcgaggccaa ggcccgccgc caggggctgg agaaggaggc
       61 cgagttcttc ggcgcgatgg acggcgcctc caagttcgtc cgcggcgacg ccgtggccgg
      121 catcatcatc accgtggtca acgtcatcgg gggattcatc gtcggcatga ccatgcacgg
      181 catgtccttc cagcagtcca tctccacctt caccatcctg accatcggtg acggcttggt
      241 gacccagacg cccgcgctca tgatttccac cgcctcgggc atcatcgtcg cccgcgccgc
      301 ctccaagcag aacctcggcg aggaggtcat ggcccagctg acccagaacg tcaagtccct
      361 ctataccggc gccggcttca tgctcgtctc ctcggccatc ccggggatgc cgaccgtccc
      421 cttcctcatc ctcggctgcg ccgtgggcgc cctcgggtac tccatccaga gaaagggcaa
      481 ggcggaaaag atcgaggcgg ccgcgaagga gaagaaggcc gcggccgcga aggacgaggc
      541 ggctccccag gacaagatcg agtcctacct gcaggtggac cagatggagc tggagatagg
      601 ctacggcctc atctccctgg tggacgtgaa ccagggcggt gacctgctgg agcgcatcac
      661 catgctccgc cgccaatgcg ccacggaaat aggcatcatc gtccccccca tccgcatccg
      721 cgacaacatc caactcaagg ccaaccagta cgtggtcaag atcaagggca tcgaggtcgg
      781 cggcggtgaa ctcatggccg gctgcttcct ggccatggat ccgggcggca ccagcacccg
      841 catccagggc atccccaccg tggagccggc cttcgggctc ccggccatct ggatcaccca
      901 gagccagaag gagacggcgg acatcgccgg ctataccgtg gtggagctgc ccgccgtcat
      961 cgccacccac ctgaccgaga tcatccgcgg ccatgacggg gaaatcctca cccgccagga
     1021 cgtcaagtcc ctggtggaca acatcaagac cgtcaacgcc accgtcgtgg aagagctcgt
     1081 gcccggcctg ctctccatcg gcgaggtaca gcgcgtgctc atcaacctgc tgaatgagaa
     1141 gatcggcata cgcgacctcg gcaccgtgct cgaggccctg gccaacgccg cgaaggtctc
     1201 caagtccgag gcctacctca ccgagcagtg ccggcagtcg ctgtcgcgcc agatatgcaa
     1261 gggcttcaag gacgccgccg gggtgatcca cgtcatcagc ctggagccca agctggaaca
     1321 gatgctggag gcctccctgc agaacaccga acggggcccg cgtctcgtga tccgtcccga
     1381 actggtgggc cgcatggtgg gcaggctcac ggccctggtg gagcgcatga tggcgggcaa
     1441 catgcaaccc gtgctgctct gctcgccggg catccggtat cagctgagga gaatcctcga
     1501 aggatcgttc cccaacctgg cggtgctttc ctacagcgag attgcgaacg gagtcaacgt
     1561 gaaggccgcg ggcaccgtgg tcctgaacga gaacgaaggc ggtagccaat gaggatgaag
     1621 accttccaag ccgacaccat gcaggaggcc ctggcgaggg tcaaggacga gatgggcccc
     1681 gacgccgtga tcctcaagtc gcggaaggcc acccgcaagc tgaatgggaa aaccgtaccc
     1741 tgcttcgaag taaccgcggc cctcgaggag aatctgtttg cccgccccga cgcacaggct
     1801 cgctccaccg cccccgatcg cggagctcc
//
LOCUS       DATGWW010000235         2044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_190596, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000235 DATGWW010000000
VERSION     DATGWW010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190596"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VK150_03520"
     CDS             <1..363
                     /locus_tag="VK150_03520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30405.1"
                     /translation="GKVGEPEAMAPLLALLDDPFAQREAAEAAAELALRTGQVEVARQ
                     ALRETGLGAAWRWPSRAALGDEAWIRALLTEWPGLTPPFRLQALEAARRLPEPLRAPL
                     KAATSDAAGQARVAWEQL"
     gene            complement(377..964)
                     /locus_tag="VK150_03525"
     CDS             complement(377..964)
                     /locus_tag="VK150_03525"
                     /inference="COORDINATES: protein motif:HMM:NF027675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HLP30406.1"
                     /translation="MAQEPARGALPWRRWNAAVHRDVGYVSVALTLAYAISGLAVNHI
                     ASWNPNYVKIQEARQIAPLDRAEPAGSLIQKAQAELRPEGRFKSAFQPDDDTLQLFYD
                     RATYAIDLPTGKVLVDATRPRPVLHALNQLHLNAPKRLWTLIADLYALALIALSLTGL
                     FILRGPKGLLGRGLWFVGAGLTVPLGYWLWWRYLA"
     gene            complement(973..1428)
                     /locus_tag="VK150_03530"
     CDS             complement(973..1428)
                     /locus_tag="VK150_03530"
                     /inference="COORDINATES: protein motif:HMM:NF027592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4920 domain-containing protein"
                     /protein_id="HLP30407.1"
                     /translation="MRLRHALTVLILLPACVHAAEAKKYGKPLTLKEEVKVSEILANP
                     DQYAGKKVRVKGLVTDVCEERGCWIKIGADKQEIMFKVEDGVIAFPVSAKGGAVVAEG
                     TVSKRVLTVEQQKAMCEKEAKALNKKADYSKVAGPKTIVRIEGLGAEIL"
     gene            1558..2019
                     /locus_tag="VK150_03535"
     CDS             1558..2019
                     /locus_tag="VK150_03535"
                     /inference="COORDINATES: protein motif:HMM:NF016535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HLP30408.1"
                     /translation="MAFLLMAFVIGLIVPLQSTVNNALRATLGSGTLLAAFVSFAVGT
                     LSLLILGVATSQPFATLGGLPRAPWWQWTGGVMGAFFVFGTTLLAPRIGLAAMVSLIV
                     AGQVASSLLFDRFGLLGLPVRDLSWVRIGGALLILAGAVLVNFGDRWFARS"
BASE COUNT          263 a          687 c          747 g          347 t
ORIGIN      
        1 ggcaaggtgg gcgaaccgga ggcgatggcg ccgctgctgg cgctgctgga cgatcccttc
       61 gcccagcggg aggccgcgga agccgcggcg gagctggccc tccgcactgg ccaggtggag
      121 gtggcccggc aggcgctccg cgaaaccggg ctgggcgccg cctggcgctg gccgtcccgc
      181 gccgcgttgg gcgacgaggc atggatccgc gctctgctga ccgagtggcc ggggctgacc
      241 ccacccttcc gcctgcaggc cctggaggcc gcccggcggc tgcccgagcc gctgcgcgcc
      301 ccgctgaagg ccgccacctc cgacgccgcg ggccaggccc gggtggcgtg ggaacagctg
      361 tgagctcggg gcccggtcag gccaggtagc gccaccagag ccagtagccg agcgggacgg
      421 tgagtccggc gcccacgaac cagagccccc gtcccagcag tcccttcggc ccccgtagaa
      481 tgaagaggcc cgtaagcgag agggcgatca gggccagggc gtagagatcc gcgatgaggg
      541 tccagagccg cttgggggca ttgaggtgca gctggttgag ggcgtggagc acggggcgcg
      601 gccgggtggc atccaccagc accttgccgg tggggaggtc gatggcgtag gtggcccggt
      661 cgtagaagag ctgcagggtg tcgtcgtcgg gctggaaggc gctcttgaag cggccctcgg
      721 gccgcagctc cgcctgggcc ttctggatca gcgacccggc gggttccgcc ctgtccaggg
      781 gcgcgatctg gcgcgcttcc tggatcttca cgtagttggg attccagctg gcgatgtggt
      841 tcacggccag cccggagatg gcgtaggcca gcgtgagcgc gactgaaacg tagccgacgt
      901 cccggtggac ggcggcgttc cagcggcgcc agggcagggc cccgcgggca ggttcctggg
      961 ccatggtggg gcctacagga tctcggcgcc gaggccctcg atgcgcacga tggtcttcgg
     1021 gccggcgact ttgctgtagt cggccttctt gttcagggcc ttggcctcct tttcgcacat
     1081 ggccttctgc tgctcgacgg tgagcacccg cttggacacg gtgccctcgg ccaccacggc
     1141 gccgcccttg gcggacacgg ggaaggcgat gacgccgtct tccaccttga acatgatctc
     1201 ctgcttgtcg gcgccgatct tgatccagca gccgcgctct tcgcagacat cggtcaccag
     1261 ccccttcacg cgcaccttct tgccggcgta ctggtcgggg ttggcgagga tctcggagac
     1321 cttcacctcc tccttgaggg tgaggggctt gccgtatttt tttgcctcgg ccgcgtggac
     1381 gcaggccgga agcaggatca ggacggtgag ggcatggcgc agccgcatgg aatctcccgg
     1441 atcggaagct tcaaggatac ccgcttcgcc ctggaggcag ccgccgcgcg attctgcgac
     1501 tggaaccgcg tctccggcta ccatcggcct cacccagcga aggagctccg gatggtcatg
     1561 gcgtttctcc tcatggcctt cgtcatcggc ctcatcgtcc ccctccaatc cacggtgaac
     1621 aacgccctcc gcgcgaccct gggcagcgga accctgctgg cggccttcgt gtccttcgcg
     1681 gtggggaccc tgtccctgct gatcctgggc gtggccacga gccagccctt cgccaccctg
     1741 ggcggtcttc cgagagcgcc gtggtggcag tggacgggcg gcgtgatggg ggcgttcttc
     1801 gtgttcggca ccaccctgct ggcgccgcgc atcggcctgg cggccatggt gtcgctgatc
     1861 gtcgccgggc aggtggcgtc gtccctgctc ttcgaccgct tcggcctcct ggggctgccg
     1921 gtgcgggacc tttcgtgggt ccgcatcggg ggcgccctgc tcatcctcgc gggggccgtg
     1981 ctggtgaact tcggggaccg ctggttcgcg cggtcctgat cagacccggg cggggaaggg
     2041 aaac
//
LOCUS       DATGWW010000236         2968 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_291451, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000236 DATGWW010000000
VERSION     DATGWW010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_291451"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..831
                     /gene="pgk"
                     /locus_tag="VK150_03540"
     CDS             <1..831
                     /gene="pgk"
                     /locus_tag="VK150_03540"
                     /inference="COORDINATES: protein motif:HMM:NF012389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HLP30409.1"
                     /translation="ETKNKEDFAASLAKLADTYVNDAFGSAHRAHASVSGMVAHFPKD
                     RVAAGFLMEKELQALGKVIHNPDKPLVVIFGGAKVSDKIELIQNFLGKADAILIGGAM
                     SYTFLKAQGFGIGKSLCEEDKLEMALDLLKQADAKGTRLLLPLDHVVAAEFKEDADCA
                     ISVDQNIPADRMALDIGPETVAAYAAEIRAARTLLWNGPMGVFEMAPYASGTLSMAEE
                     LAEAAGRGAFVLVGGGDSVAAVNKAGVGPRMSHVSTGGGASLEFLSGLELPGVAALQR
                     "
     gene            complement(822..1328)
                     /locus_tag="VK150_03545"
     CDS             complement(822..1328)
                     /locus_tag="VK150_03545"
                     /inference="COORDINATES: protein motif:HMM:NF022963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3224 domain-containing protein"
                     /protein_id="HLP30410.1"
                     /translation="MPLPSTLGITLLFVAVLNAQSPKEVSVTRQARGSFDVSVKPLTE
                     GVRPDAWAPGRLSIDKRFKGDLEAASQGEMLAATTEVQGSAGYTAIEKVSGRLQGRSG
                     TFLLQHFAVMARGVPGEWIVQVIPDSGTGGLKGLTGRLLITITGKQHDYVLEYTLPAE
                     AEEAAPQR"
     gene            1424..2233
                     /locus_tag="VK150_03550"
     CDS             1424..2233
                     /locus_tag="VK150_03550"
                     /inference="COORDINATES: protein motif:HMM:NF042696.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLP30411.1"
                     /translation="MATPVEWRPRGVVGAEAVRRHSPVGRFRPEPPLDALVEHFWTIA
                     WDLRGEPPRTGETLPHPSVYLVVEADRSGLSGVNTGRFLRVLEGRGQVAGVKFLPGCF
                     RPFWKAPVRTLTDQVLPLDTAFGAEGATLEADVLRCEDDAPAAVALLEAFLLARLPAP
                     DPKAQLARSIVARILEDRDLTQAEAVARDAGLSLRSLQRLFSDYVGVSPKWVILRYRL
                     HDAMAQLEAGQPVNLPALALALGFFDQAHFTRAFRTFLGRTPAGYARNLKH"
     gene            2301..>2968
                     /gene="tpiA"
                     /locus_tag="VK150_03555"
     CDS             2301..>2968
                     /gene="tpiA"
                     /locus_tag="VK150_03555"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HLP30412.1"
                     /translation="MRCVVANWKMNLASAEARSFCEDLLRLAAPQVGSGTGLEVGIAP
                     PFTLLHLVSGLLRPRGIQVFGQNGHAEPKGAFTGEVSMPQLRDAGCSGVLLGHSERRQ
                     FFGETDAALAKKVKAAWQWDLLPLLCIGETLEQRDAGRTLEVLGQQLSILGETGPGPL
                     WVAYEPVWAIGTGRRAEAPQVQEAHAFIRAELKRLLPTGTYPVPILYGGSVTPESFPE
                     LLGLP"
BASE COUNT          455 a         1050 c         1003 g          460 t
ORIGIN      
        1 gagacgaaga acaaggagga cttcgccgcc agcctggcga agctggccga cacttacgtg
       61 aacgacgcct tcgggtcggc ccaccgcgcc cacgcctccg tcagcggcat ggtggcgcac
      121 tttccgaaag accgcgtggc cgcgggcttc ctcatggaga aggagctgca ggccctgggc
      181 aaggtcatcc acaaccccga caaacccctg gtggtgatct tcggcggcgc caaggtcagc
      241 gacaagatcg agctcatcca gaacttcctc ggcaaggccg acgccatcct catcggcggc
      301 gccatgagct acaccttcct caaggcccag ggcttcggga tcggcaagag cctctgcgag
      361 gaggacaagc tggaaatggc cctcgacctg ctgaagcagg cagacgccaa gggcacgcgc
      421 ctgctgctgc cccttgacca tgtggtggct gctgagttca aggaggacgc ggactgcgcg
      481 atctcggtgg accagaacat ccccgccgac cgcatggccc tcgacatcgg gcccgaaacc
      541 gtcgccgcct acgccgccga gatccgggcc gcgaggaccc tgctctggaa cggtcccatg
      601 ggcgtcttcg agatggcccc ctacgccagc ggcaccctca gcatggccga ggagctggcc
      661 gaggccgcgg gccggggcgc cttcgtgctg gtgggtggcg gcgacagcgt ggccgccgtg
      721 aacaaggcgg gcgtgggtcc ccgcatgagc cacgtctcca ccggcggcgg cgccagcctg
      781 gagttcctca gcggcctgga gctgcccggc gtcgcggccc ttcagcgctg aggggcggcc
      841 tcttctgcct ccgcgggcag cgtgtattcc agcacgtagt catgctgctt tcctgtgatc
      901 gtgatgagca gcctcccggt caggcccttc aggccgccgg tgcctgaatc ggggatcacc
      961 tggacgatcc attcgcccgg gacaccgcgc gccatcaccg cgaaatgctg caggaggaag
     1021 gtgccgctcc ggccctggag ccggccgctg accttctcaa tggccgtgta gcccgccgag
     1081 ccctgcacct ccgtcgtcgc cgccagcatc tcgccctggc tggcggcctc caagtcaccc
     1141 ttgaagcgct tgtcgatgga caggcggccc ggggcccagg catcgggccg caccccttcg
     1201 gtcaggggct tcacggagac gtcgaacgat cctctggcct gacgggtcac ggagacctcc
     1261 ttgggggatt gggcattcag aacggcgaca aacagcaggg tgatgccgag ggtggaagga
     1321 aggggcatgg gggactcctg gggaggggga cggacccgag gttggcgcat gcaagggagg
     1381 cggtattgta gaaacacgac aaccattctc tggagcgatc ttcgtggcta cccccgtgga
     1441 atggcggccc aggggcgtgg tgggcgccga ggccgtccgc cggcattccc cggtgggtcg
     1501 gttccggcca gaaccacccc tggacgcgct ggtcgaacat ttctggacca tcgcctggga
     1561 cctgcggggc gaaccgccgc gcaccgggga gacgctgccg catccatcgg tctacctggt
     1621 ggtggaggcg gaccgctcgg ggctttccgg cgtcaacacc ggccggtttc tgcgggtgtt
     1681 ggaaggccgg gggcaggtgg ccggcgtcaa gttccttccc ggttgcttca ggcctttctg
     1741 gaaggccccg gtccgcaccc tcaccgacca ggtcctaccc ctggacaccg ccttcggcgc
     1801 cgaaggcgca accctggagg ccgacgtcct gcggtgcgag gatgacgcgc ccgccgccgt
     1861 ggccctcctc gaggcgttcc tcctggcccg cctgccggcc cctgacccca aggcccagct
     1921 ggcccggagc atcgtggccc gcatcctgga ggaccgcgac ctgacccagg ccgaggcggt
     1981 ggcgcgggac gcgggcctga gcctccgctc gctgcagcgg ctcttcagcg actatgtggg
     2041 cgtgagcccc aagtgggtga tcctgcggta ccgcctgcac gatgccatgg cgcagctcga
     2101 ggcgggtcag cccgtgaacc tgccggccct ggccctggcg ctcggctttt tcgatcaggc
     2161 ccactttacg agggccttca ggaccttcct gggccgcacc cccgcggggt acgccaggaa
     2221 cctcaaacac tgatagcctc tactcaccac ccataggtcg tgttcattcc gccaaggtgc
     2281 cacctctcca gggagatccc atgcgctgtg tcgtcgccaa ctggaagatg aacctggcct
     2341 ccgccgaggc ccggtccttc tgcgaggacc tgctcaggct cgccgcgccc caggtgggct
     2401 ccgggaccgg gctggaggtg ggcatcgccc cgcccttcac cctcctgcac ctggtgagcg
     2461 ggctcctgcg tcccaggggc atccaggtct tcgggcagaa cggccatgcc gagcccaagg
     2521 gcgccttcac cggcgaagtc tctatgcccc agctgaggga cgcgggctgc tccggcgtgc
     2581 tcttgggcca cagcgagcgg cgccagttct tcggcgagac cgacgcggcc ctggcgaaga
     2641 aggtgaaggc cgcctggcag tgggacctcc tgcccctgct ctgtatcggc gaaacgctcg
     2701 agcagcggga cgccggtcgc accctggaag tgcttggaca acagctgtcc attctcggcg
     2761 agaccggccc cggtcccctc tgggtggcct acgagcccgt ctgggccatc ggcaccgggc
     2821 gacgggcgga ggcgccgcag gtgcaggagg cccacgcctt catccgggcc gagctgaagc
     2881 gcctgctgcc caccggcacc tacccagtgc ccatcctcta cggcggcagc gtcacgccgg
     2941 agagcttccc cgagctgctc ggcctccc
//
LOCUS       DATGWW010000237         4400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_17955, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000237 DATGWW010000000
VERSION     DATGWW010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4400
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17955"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1363
                     /locus_tag="VK150_03560"
     CDS             <1..1363
                     /locus_tag="VK150_03560"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HLP30413.1"
                     /translation="REALASAVEPAPAPPPPPPPVAPARPEKEATGHRLRVGKGGQGN
                     CLSLKVALRQAQAGSEILVFPGLYRESIVVDKDVTIFAIGEPGEVVIEAASGPAALLS
                     AQAATFRNLTLRATGSGPALCVASGAPTLDGCILAGQELALRVEGGASPRLRGCTLTG
                     GSEGLVVLEGGQVQMEDGAVRGFRDTGIRLAPGGQASLQVVEVGPGAGVGLKVGPRSQ
                     ATAEACLFLGEAGSVEVEPEGRVQLTRCRLMESHFAGLLSLERSHAVLEGCDLGNHTC
                     AGVHVLAGANVLLRQCRVVGNAGFGVSVMERGLATLDSCVVQANGGAGLLIQHGGIVQ
                     ARSCAFSEGRSMGVDCAEGGQGILDCCEIAGNAGAGAQVEPGGSLLLVRCTLKDGRDT
                     GLLLLEDSQATLEECVVHRNARGGVLLARDAADPVMRGQNRIEDAFQRVDSAGNLVKV
                     APL"
     gene            complement(1360..2619)
                     /locus_tag="VK150_03565"
     CDS             complement(1360..2619)
                     /locus_tag="VK150_03565"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HLP30414.1"
                     /translation="MNLTRSSGGGDGRDAPIDDPAQIRRAMAELKRTEAEFPIKVEGT
                     HTLPYTSHLAHVDLDKQHLHLKLIRPLPHEMAPGAPFEMLFAVGDQRFEAPITFLGRE
                     SYLLYRFTIPVRMTQSDRRRHKRYPFRPREKAYVLAQDAGVPGHGLAGPLVNLSLGGL
                     AFRVDRVVRLDDHLRITPGLGFFDKGKELPMLKIRDLPKLPLFEARGTLANAWEQDGE
                     IVVGVKFGDLRDSELRQIQDVLNFRDQMQRSSGTSSVSEASVREAKARPGAPEPPDPA
                     RRVNPAGGLTPDALTRLGRRCAILMLVMAPGEARDQVRRNLEAQGYLRLELVDVLDQA
                     LERLRVNTTAKGRLVVLDLPPEVEDPLEGIRRLQRELGELRELPVAIMQQQGMPAATE
                     DALIRPMPRPGADPAAWLPILDELAGV"
     gene            complement(2671..3771)
                     /gene="ychF"
                     /locus_tag="VK150_03570"
     CDS             complement(2671..3771)
                     /gene="ychF"
                     /locus_tag="VK150_03570"
                     /inference="COORDINATES: protein motif:HMM:TIGR00092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HLP30415.1"
                     /translation="MAVACGIVGLPNVGKSTLFNALTRAGAASANYPFCTIEPNTGVV
                     DVPDPRLAALAEIVKPQRVLPAAQEFVDIAGLVRGASKGEGLGNAFLGHIRETDAIVQ
                     VVRCFEDGNVTHVEGGVNPERDLSIIETELVIKDLDAIEKGLERHRKVAKTGNKESIA
                     MVAVLERIFAVLNDGKWARTAGLSPEDKALVKSYGLLTLKPTLFVGNIGEEDIRNPEG
                     NLHYVKLLALAAERDAPCIPICSKLEAEIQDLPEEDRPLFLEEAGLSEPGLNVLIHAS
                     YALLGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFEKGFIRAQVIAYEDFIQCR
                     GEQGAKDAGKMRTEGKDYVVKDGDLMNFLFNV"
BASE COUNT          649 a         1412 c         1584 g          755 t
ORIGIN      
        1 ccgcgaagcc ctggccagcg ccgtggagcc ggctcccgca ccgcctccgc ccccgccccc
       61 cgtggctccc gcccggcccg agaaggaggc caccggccat cggctccggg tggggaaggg
      121 cggccagggg aactgcctga gcctgaaggt ggccctccgg caggcccagg cgggctcgga
      181 aatcctagtg tttccggggc tgtaccggga atccatcgtg gtggacaagg atgtgaccat
      241 cttcgccatc ggcgagccgg gcgaggtggt gatcgaagcc gcgtcgggcc ctgcggcgct
      301 gctcagcgcc caggccgcga ccttccggaa cctcaccctg cgcgccacgg ggtctggtcc
      361 cgccctgtgc gtggcttcgg gcgcccccac cctcgacggg tgcatcctgg ccgggcagga
      421 gctggcgctg cgcgtggagg gcggcgcttc cccccggctg cggggttgca cactcacggg
      481 tggatcggaa ggtctggtgg tgctggaagg cggccaggtc cagatggagg acggggccgt
      541 ccgcggcttc cgggacaccg ggatccgtct ggccccgggt ggccaggcca gcctccaggt
      601 ggtggaggtg gggcccgggg ccggcgtggg cctgaaggtg ggccctcgga gtcaggccac
      661 ggcggaagcc tgtctctttc ttggcgaagc ggggagcgtg gaggtggaac ccgaaggccg
      721 ggtgcagctc acgcgctgcc ggctgatgga gagccacttc gcgggcctgc tttcgctcga
      781 acgcagccat gcggtgctgg agggctgcga cctcggcaat cacacctgcg cgggggtgca
      841 tgtcctcgcc ggggccaacg tcctgctgcg gcagtgccgg gtggtgggga atgccggctt
      901 cggtgtctcg gtcatggagc ggggtctggc cacccttgac agctgcgtgg tccaggccaa
      961 tggcggcgct ggcctgctca tccagcacgg cggcatcgtc caggcccggt cctgcgcttt
     1021 cagcgaaggc cggtccatgg gagtcgactg cgccgaaggg ggccagggca tcctggattg
     1081 ctgcgagatc gcgggaaacg ccggcgccgg cgcgcaggtg gaaccgggtg gcagcctgct
     1141 gctcgtccgc tgcacgctga aggatggccg ggacacgggg ctgctgctcc tggaggattc
     1201 gcaggccacg ctggaggagt gcgtggttca ccggaacgca cggggcggcg tgctgttggc
     1261 ccgggacgcg gccgaccccg tgatgcgggg ccagaaccgc atcgaggatg ccttccagcg
     1321 ggtggactcg gcgggcaacc tggtcaaggt ggcgccgctc tagacgccgg ccagctcgtc
     1381 gaggatgggc agccacgcgg ccgggtcggc gcccggacgg ggcatgggcc ggatcagcgc
     1441 gtcctccgtg gcggcgggca tcccctgctg ctgcatgatc gccaccggga gctcgcgcag
     1501 ttcgccgagc tctcgctgca ggcggcggat gccctccagg ggatcctcga cctcgggggg
     1561 caggtccagg accacgagcc tccccttggc ggtggtgttg acgcggagtc gttcgagggc
     1621 ctgatccagg acgtccacca actccaggcg gaggtagccc tgggcttcga ggttgcggcg
     1681 gacctggtcc cgggcctcac ccggcgccat gaccagcatg aggatggcgc agcggcgccc
     1741 cagccgggtc agggcgtccg gcgtcagccc gccggctgga ttcacccgcc gggcggggtc
     1801 cggcggctcg ggggcaccgg ggcgcgcctt ggcttcacgc acggaggcct cgctcaccga
     1861 cgaggtgccg gagcttcgct gcatctggtc ccggaaattc agcacgtcct ggatctggcg
     1921 aagctcggaa tcccggaggt cgccgaactt cacgccgacc acgatctcgc catcctgctc
     1981 ccaggcgttg gcgagggtgc cccgggcctc gaagaggggc agcttgggca gatcccggat
     2041 cttcagcatg gggagttcct tccccttgtc gaagaagccc aggcccggcg tgatgcggag
     2101 gtggtcatcc agccgcacca cccggtccac gcggaaggcc agtccgccaa gggagaggtt
     2161 gacgaggggg cccgccaacc cgtggccggg cacccccgca tcctgggcca ggacataggc
     2221 cttctcccgg gggcggaagg ggtagcgctt gtggcgccgc cggtcggact gggtcatccg
     2281 gacgggaatg gtgaagcggt agagcaggta ggattcccgg cccaggaagg tgatgggcgc
     2341 ctcgaagcgt tggtcgccca ccgcgaacag catctcgaag ggcgcgccgg gggccatttc
     2401 gtgaggcagg ggccggatca gcttcaggtg gaggtgctgc ttgtccagat ccacgtgcgc
     2461 gaggtgggag gtgtagggca gggtgtgggt gccctccacc ttgatgggga actcggcctc
     2521 ggtccgcttc agttccgcca tggcccgccg gatctgggca ggatcgtcga tgggcgcatc
     2581 gcgcccatcg cctccgccgc tggatcgggt caggttcatc atcgctcgct gctccccaag
     2641 gcatcggatg ccgggggcgg ggggatgagt tcagacgttg aagaggaaat tcatcaggtc
     2701 cccgtccttg acgacgtagt ccttgccttc ggtcctcatc ttgcccgcgt ccttggcgcc
     2761 ctgctcgccg cggcactgga tgaagtcctc gtaggcgatg acctgggccc ggatgaagcc
     2821 cttctcgaag tccgtgtgga tgacgcccgc ggcctggggc gccgtgtcgc ccttgtggat
     2881 ggtccaggcc cggacttcct tcaccccggc ggtgaaatag gtctgcaggc ccagcagggc
     2941 gtagctggcg tggatcagga cgttcaggcc gggctcgctg aggcccgctt cctccaggaa
     3001 caggggccgg tcctcctcgg ggagatcctg gatctcggcc tccagcttcg agcagatggg
     3061 gatgcagggc gcgtcgcgct cggcggccag ggccaggagc ttcacgtaat gcagattgcc
     3121 ctcgggattc cggatgtcct cttccccgat gttgcccacg aagagggtgg gtttgagggt
     3181 gagcaggccg taggacttca ccagggcctt gtcctcgggc gagaggcccg ccgtccgggc
     3241 ccacttgccg tcattcagga cggcgaagat ccgctccagg acggccacca tggcgatgga
     3301 ctccttgttg ccggtcttgg ccaccttccg atgccgttcc agccccttct cgatggcgtc
     3361 caggtccttg atgaccagtt cggtctcgat gatgctcagg tcgcgctcgg ggttcacccc
     3421 gccttccacg tgggtgacgt tgccgtcctc gaagcagcgc accacctgga cgatggcatc
     3481 ggtctcccgg atgtggccca ggaaggcgtt gcccagtccc tcgcccttgc tggcgccccg
     3541 caccaggccc gcgatgtcca cgaactcctg ggcggcgggg agcaccctct ggggcttcac
     3601 gatctccgcc agggccgcca gccgcggatc ggggacgtcc accacccccg tgttgggctc
     3661 gatggtgcag aacgggtagt tggccgaagc cgcgcccgca cgggtgaggg cgttaaaaag
     3721 ggtggacttc cccacattgg gcaaacccac gattccacag gcgacagcca tcccatcctc
     3781 caagcctttc agtatctcag agagcagatg tgacgaaacg acaaagtctc aaatttcacg
     3841 actatctagc cccatatccg cgattcttcc cgtttgtttc tcctaaactt ttccgttatg
     3901 cctcaaaact ccgagaaccg cgcaggatcc ggggctccgg gtgggtacct atctggaccg
     3961 gggcctggga ccgaggtaca ggggacgggc ggcccaagcc gaaacctgga gccgcccgtg
     4021 gggtgtgggg ttgaggggtt ctagcccact cgggtttgaa ggggaacgat gggggccagc
     4081 ggggtagggg gtgtcggggg ctgaccgagg gtttgaatcc ccttccgcat gtcgtccatc
     4141 tggccacccc agtagtggtc catcgttatg tcgatcttct ggtggcgcat tagctgcatc
     4201 accactgctg gggcaattcc atcacggaga agattggttg caagagaagc ccggagacga
     4261 tgatgagtga gtggcttggg tagacccata agctgcgagg ctctacggag gagcccttga
     4321 gtccattcgt tatcgtgctt tcctgtcttc ttcccacggc cagggaacat caactgccct
     4381 ggctttcgtt cgagagtggc
//
LOCUS       DATGWW010000238         2115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_291570, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000238 DATGWW010000000
VERSION     DATGWW010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_291570"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..515)
                     /locus_tag="VK150_03575"
     CDS             complement(51..515)
                     /locus_tag="VK150_03575"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HLP30416.1"
                     /translation="MVLWHYELNTPMGPMRAAFDVRGRLKELVLEGLDPRKTSPLPPR
                     EQREAKRFLDRQLDAYLAGTLRTFTVPLDPVGTATDLRIWDTVRTIPYGLSRQPGDLA
                     AWLGLEEDVIIMACSRNPIALLIPAHRVVLPGEGPLPKALRDLESGLGWRKP"
     gene            588..1397
                     /locus_tag="VK150_03580"
     CDS             588..1397
                     /locus_tag="VK150_03580"
                     /inference="COORDINATES: protein motif:HMM:NF014658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis protein"
                     /protein_id="HLP30417.1"
                     /translation="MAAAPFRLSIIDYLNAAPLNHGFKHGLGWEHFHLKFHYPSACAD
                     RLRDGEVDAGIVSSIEYLRIPHLRIVPGLCIASPKRVRSVVVLSKVPPEQIRSLALDT
                     SSRTSVVLAQLLLRERYGVSPAVTDMGPDLPAMLEANDAALMIGDAAMRAPRQGLFVL
                     DLAEEWHAWTGLPFVFALWLVRKDAPDLPVPGGVASFFHKSLEIGQSQLPAIIEEARR
                     TIGWTKIELHEYLTENISYTLGEAERESLALFFEKAVRHGFAPEEKPLRFL"
     gene            1450..>2115
                     /locus_tag="VK150_03585"
     CDS             1450..>2115
                     /locus_tag="VK150_03585"
                     /inference="COORDINATES: protein motif:HMM:NF044430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30418.1"
                     /translation="MTDLAAAFQAHIADRQRTTEEALAQTGFDALVISSGKVYTHFAD
                     DQDAPFHPTPHFAHWCPMAGPHHVLVVRPGKRPRLIRFAPEDFWYEQAPLGQPFWAAA
                     FDIEEAGNVEEVWKLLGNPNRAAYIGNETDRAQAAGLELNPEGLTARLDWHRTTKSAY
                     EVQCIEEATVIAARGHHAARAAFMAGCSELEIHHAYVQAAGIVDHEMPYGSIVALNEK
                     GAIL"
BASE COUNT          340 a          764 c          688 g          323 t
ORIGIN      
        1 gaaggcgacc ggcatgccca taagcatgtc agaatcacgg ttttttggga tcagggcttc
       61 cgccatccaa gaccggattc gaggtcgcgc agggccttcg ggaggggccc ctcgccgggc
      121 aggaccaccc ggtgggccgg aatcagcagg gcgatggggt tccgcgagca ggccatgatg
      181 atcacgtcct cctccagccc cagccaagca gccaggtccc ccggctggcg ggacagcccg
      241 taggggatgg tccgcaccgt gtcccagatg cgcaggtcgg tggcggtgcc cacggggtcg
      301 agaggcacgg tgaaggtgcg gagggtgccc gccaggtagg cgtccagttg gcgatccagg
      361 aagcgcttgg cttcccgctg ttcccgaggc ggcagggggc tggtcttgcg gggatcaaga
      421 ccttcaagga ccagctcctt caggcggccg cgcacgtcga aggcggcccg catgggcccc
      481 atcggggtgt tcagctcgta gtgccacagg accatgcagg catcatggca ggccgccgga
      541 gcctgtccaa gggttcgggg cctggaatgg ccggtagact cgatgccatg gccgccgcac
      601 ccttccgcct gtccatcatc gactacctga acgccgcccc cctgaaccat gggttcaagc
      661 acggcctggg ctgggagcac ttccacctca agttccacta tccctcggcc tgcgccgacc
      721 gccttcggga tggcgaggtc gatgccggca tcgtcagctc catcgaatac ctgcggatcc
      781 cccacctgcg catcgtgccg gggctctgca tcgcctcgcc gaagcgggtg cggagcgtgg
      841 tggtcctctc gaaagttccg cccgagcaga tccgcagcct ggcgttggac acgtccagcc
      901 gcaccagcgt ggtgctggcg cagctgctgc tgcgggaacg ctacggggtg agccccgccg
      961 tgacggacat gggtcccgac ctgcccgcca tgctggaggc caacgatgcg gccctgatga
     1021 tcggcgacgc cgccatgcgg gcgccgcggc agggactctt cgtgctcgac ctcgctgagg
     1081 agtggcacgc ctggaccggc ctgcccttcg tcttcgccct gtggctggtg cggaaggacg
     1141 ccccggacct gccggtgcca ggcggcgtgg cctccttctt ccacaagagc ctggagatcg
     1201 gccagtccca gctgcccgcc atcatcgagg aggcccggcg caccatcggc tggaccaaga
     1261 tcgagctgca cgagtacctc accgagaaca tcagctacac cctgggcgag gcggagcggg
     1321 agagcctggc cctcttcttc gagaaggccg tccgccacgg gttcgcgcct gaggagaagc
     1381 cgctgcgctt cctttgactt cccgatccat cggccctctg acaccctgaa cgttcacctg
     1441 gatgacccca tgaccgatct cgccgccgcc tttcaagccc acatcgccga ccgccagcgc
     1501 accacggagg aagccctcgc ccagacgggc ttcgacgccc tggtgatctc cagcgggaag
     1561 gtctacaccc acttcgccga cgaccaggac gcgcccttcc atccgacgcc ccacttcgcc
     1621 cactggtgcc ccatggccgg cccccaccat gtgctggtgg tccgccccgg caagcgcccc
     1681 cggctcatcc gcttcgcccc cgaggatttc tggtacgagc aggcgcccct gggccagccc
     1741 ttctgggccg ccgccttcga catcgaggag gcgggcaacg tggaggaggt ctggaagctc
     1801 ctgggcaacc cgaaccgcgc cgcctacatc ggcaacgaga ccgaccgcgc ccaggccgcc
     1861 ggccttgagc tgaaccccga gggcctcacc gcccgtctgg actggcaccg caccaccaag
     1921 tcggcctacg aggtgcagtg catcgaggag gccaccgtca tcgccgcccg gggtcaccac
     1981 gctgcccggg ccgccttcat ggccggctgc agcgagctgg agatccacca tgcctatgtg
     2041 caggcggcgg ggatcgtcga ccacgagatg ccctacggca gcatcgtggc cctcaacgag
     2101 aagggcgcga tcctc
//
LOCUS       DATGWW010000239         1908 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_331096, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000239 DATGWW010000000
VERSION     DATGWW010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1908
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_331096"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..534)
                     /locus_tag="VK150_03590"
     CDS             complement(<1..534)
                     /locus_tag="VK150_03590"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HLP30419.1"
                     /translation="MTPLKAWSTLPVAFTLAATMVGCVSMAPKYRTPEAPVSPAWPEG
                     PSYKAAPAGTAATDLPWLAFYVDAGLRKVLDLALVHNRDLRIAALNTEKARAYYRIQR
                     ADLLPAVNVVGQGTRQRLPASVSGVGQSIVVEQDAVTVGISAWELDLFGRVRSLKNRA
                     LETYLATEQARNAMQTSL"
     gene            complement(531..>1908)
                     /locus_tag="VK150_03595"
     CDS             complement(531..>1908)
                     /locus_tag="VK150_03595"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLP30420.1"
                     /translation="VQQHFQDSEKDAVESCLTVGGFSIAGRGQNNGMAFVKLKDWKLR
                     DRADLKADAVVKRAMGAFSARRDAMVFAFAPPAILELGNATGFDFQLQDRGGLGHAKL
                     MEARNQLLGMTAQNKNLKAVRPNGLDDQPEYNVRLDQDRAGALGVPLPVISDTLASTW
                     GGSYVNDFINRGRVKKVYMQADAPFRMQLEDLNKLYVRNTKGAMVPFSAFSAGEWSFG
                     SPNLQRYNSFPSVNIQGEPAAGKSTGDAMLAMEDLASKLPAGIGFEWTGLSFQERQAG
                     TQAPALYAVSILVIFLCLAALYESWTIPFSVLLVLPVGVFGTVLATWGRGLSSDVYFQ
                     IGLLTTLGLTAKNAILIVQFAQEQIAQGASLLDAALEASRLRLRPILMTSLAFTFGVL
                     PMAISRGAGAAAQNAIGTGVVGGMLTATFIAIFYIPLSFVLVSQMFRKKAQEPVPADA
                     AASAEGQP"
BASE COUNT          295 a          571 c          738 g          304 t
ORIGIN      
        1 aagcgacgtc tgcatggcgt tacgggcctg ctcggtggcg aggtaggtct ccagggcgcg
       61 gttcttcagg ctgcggacgc ggccgaagag atccagctcc caggcgctga tgcccacggt
      121 gaccgcatcc tgctcgacca cgatggactg gccgacgccg gagacgctgg cgggaagccg
      181 ctgccgcgtg ccctggccca ccacgttgac ggcggggagc aggtccgccc gctggatgcg
      241 gtagtaggcc cgggccttct cggtgttcag cgcggcgatg cggagatccc ggttgtggac
      301 gagggcgagg tcgaggacct tccgcaatcc ggcgtccacg tagaacgcca gccagggcag
      361 gtcggtggcc gcggtgcccg ccggcgcggc cttgtaggaa ggcccttcgg gccaggccgg
      421 gctgaccggc gcctcgggcg tccggtattt cggggccatg gagacgcagc cgaccatggt
      481 ggccgcgagg gtgaacgcca cgggcagggt ggaccaggct ttgagcggcg tcatggctgc
      541 ccctccgcgg aagccgcggc atccgcgggg actggttcct gggctttctt cctgaacatc
      601 tggctcacca ggacgaaaga gaggggaatg tagaagatgg cgatgaaggt ggcggtgagc
      661 atgccaccga ccacgccggt gccgatggcg ttctgggcgg cggcgccggc gccccggctg
      721 atggccatgg gcagcacgcc gaaggtgaag gccagcgagg tcatcaggat cgggcggagc
      781 cgcaggcggg aggcctccag ggccgcgtcg agcagcgagg cgccctgggc gatctgctcc
      841 tgggcgaact gtacgatcag gatggcgttc ttggcggtga ggcccagggt ggtcagcagg
      901 ccgatctgga agtagacgtc gctggagagg cctcggcccc aggtcgccag caccgtgccg
      961 aacacgccga ccggcaggac cagcaggacc gagaagggaa tggtccagct ttcatagagt
     1021 gcggccaggc agaggaagat gacgaggatg gagacggcat agagcgccgg ggcctgggtg
     1081 ccggcctggc gttcctggaa ggagaggccc gtccattcga agccgatgcc ggccggcagc
     1141 ttggaggcga ggtcctccat ggccagcatg gcgtcgccgg tgctcttgcc ggcggcgggt
     1201 tcaccctgga tgttgaccga ggggaagctg ttgtagcgct ggaggttggg cgagccgaag
     1261 ctccattcgc ccgcggagaa ggcggagaag gggaccatgg cgcccttggt gttgcggacg
     1321 tagagcttgt tgagatcctc cagctgcatg cggaacggcg cgtcggcctg catgtagacc
     1381 ttcttgacgc ggccgcggtt gatgaagtcg ttcacgtacg agccgcccca ggtgctggcg
     1441 agggtgtcgc tgatcacggg cagggggacg cccagggcgc cggcccggtc ctgatcgagg
     1501 cgcacgttgt actccggctg gtcgtccagg ccgttggggc ggaccgcctt gaggttcttg
     1561 ttctgggcgg tcatgcccag cagctggttg cgggcctcca tgagcttcgc gtggccgagg
     1621 ccgccgcggt cctgcagctg gaagtcgaat ccggtggcgt tgcccagctc caggatcgcg
     1681 gggggcgcaa aggcgaacac catggcgtcg cggcgggcgg agaaggcgcc catggcgcgt
     1741 ttgacgacgg cgtcggcctt gaggtcggcg cggtcgcgga gcttccagtc cttgagcttg
     1801 acgaaggcca taccgttgtt ctggccccgg cctgcgatgc tgaagccgcc gacggtcaga
     1861 caggactcta cggcgtcctt ctcgctgtcc tgaaagtgct gctggacc
//
LOCUS       DATGWW010000240         4379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_105956, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000240 DATGWW010000000
VERSION     DATGWW010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4379
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105956"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            34..441
                     /gene="rpsK"
                     /locus_tag="VK150_03600"
     CDS             34..441
                     /gene="rpsK"
                     /locus_tag="VK150_03600"
                     /inference="COORDINATES: protein motif:HMM:NF003698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HLP30421.1"
                     /translation="MAKTQTRTAGKKVVKKKEKKNVPHGVAHVQASFNNTIISISDPM
                     GNMLCWASSGNQNFRGTRKGTPFAAQVAAGIAAEAAKEQGVRSVDVRVKGPGAGRESA
                     IRALNAAGIQVTSIRDVTPIPHNGCRPPKRRRV"
     gene            457..1089
                     /gene="rpsD"
                     /locus_tag="VK150_03605"
     CDS             457..1089
                     /gene="rpsD"
                     /locus_tag="VK150_03605"
                     /inference="COORDINATES: protein motif:HMM:NF003717.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HLP30422.1"
                     /translation="MARYTDAVCRLCRREGMKLYLKGERCFKEKCSFETRKGKIPGQH
                     GAGKIKKPTGYALQLREKQKVKRIYGVLEKQFRHYFEKADAKKGVTGHNLLGFLECRL
                     DNVVYRLGFAPSRSSARQMVMHGHVLVNGKRVDIPSYQVKPGQAVELGTRAKENDGVK
                     SSVETSAGRGIPKWLTLDAAAFKGQVLAAPTREDITLDINEQLIVELYSK"
     gene            1099..2070
                     /locus_tag="VK150_03610"
     CDS             1099..2070
                     /locus_tag="VK150_03610"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:NF003513.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HLP30423.1"
                     /translation="MLNLSDFQRPRFAEVTPGSLTDSYGEFVAYPFERGFATTVGHSV
                     RRVLLSSIQGAAVTNVRIKGVMHEFTTLPGVWEDITHVLLNLKEVPFKLHSTEPQTVT
                     ISAKGEGTVTSAAIRCNQNVEVVDPNIHIATLGEEGELEIEMVVRMGRGFVTADRNHD
                     ESLGLGFIPMDANHSPILRVNYIVEPARVGQSTDYEKLTLQVWTNGAVNPKEAVSDAA
                     LILREHFLIFARQDEQVVETEPGQTILSTENVNSMLGKSVEELELSVRANNCLRNANI
                     TTIGELVQRTEAELMKTKNFGKKSLQEIKDELARIGLSLGMRLEQEV"
     gene            2080..2472
                     /gene="rplQ"
                     /locus_tag="VK150_03615"
     CDS             2080..2472
                     /gene="rplQ"
                     /locus_tag="VK150_03615"
                     /inference="COORDINATES: protein motif:HMM:TIGR00059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HLP30424.1"
                     /translation="MRHNVSGKRLGRTTNQRKALMKNLATALIESERIETTLVKAKEL
                     RSFVEPFITLAKTDSVANRRLAMARLGSKDAVQKLFGADFRKRFESRPGGYTRILKMA
                     HRLGDAADMALIEFVDYTLPEIKAEDGE"
     gene            complement(2527..3984)
                     /locus_tag="VK150_03620"
     CDS             complement(2527..3984)
                     /locus_tag="VK150_03620"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional serine/threonine-protein
                     kinase/universal stress protein"
                     /protein_id="HLP30425.1"
                     /translation="MTPTRLEPGVILDGFRLGERIHRGGMAAIWEATHPGYNFPLLVK
                     VPKMSEGVDPAAIVGFEMEQMILPRLGGPHVPRYVAQGDFGLQPYLVFERIPGTSLLP
                     MLKHLPLPIQAVTSLGIRAAVALDDLHRQHVVHLDVKPSNLMTRPTGEIVLLDFGLSH
                     HDELPDLMGEEFRLPYGTAPYMAPEQVLGHRRDPRSDQFALGVLLYFFLTGRRPFGDP
                     QRLAGLKRRLWRDPVPPRKLRPDCPPWLQEVILRCLEVHPAWRYPTSGHLAMALQHPD
                     QIKLTMRAEKLRQDPFLTVLRRRFADHQLVVPTAKNPARHDGDAPILAVAIDLSPEAA
                     PIADTLRTLVARMLTTLPGARVACLNVLKLGRITLDQTLDAQGRNIHHQRLVELRSWA
                     IPLELEEGRVSYHVLESPDPASAILQYVSANHVDHLVMGARASSLRRTLLGSVSSQVA
                     AQAPCTVTVARSLRLRASNLPPEPKEEDDAPWTVG"
     gene            complement(3987..>4379)
                     /locus_tag="VK150_03625"
     CDS             complement(3987..>4379)
                     /locus_tag="VK150_03625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30426.1"
                     /translation="ASPQTYPAWIYIHDGPAAKRALEASRAQMVFCGHTHLPALHGIT
                     ATGQLVSFQPVAKVPIPLSRHRRWLSVIGAVGQSRDGDPTAAYATFDTDRSEITHWRV
                     PYDVDATAQAILLAGLPPSLAARLKRGR"
BASE COUNT          823 a         1442 c         1478 g          636 t
ORIGIN      
        1 gtagccggca agaagaagta aggcgaggag cacatggcca agacccagac ccggaccgcc
       61 ggtaagaagg tggtcaagaa gaaggaaaag aagaacgtcc cccacggcgt ggctcacgtc
      121 caggcgtcct tcaacaacac catcatctcc atctctgatc cgatggggaa catgctctgc
      181 tgggcttcca gcggcaacca gaacttccgc gggacccgca agggcacgcc cttcgccgcc
      241 caggtggccg ccggcatcgc tgccgaggcc gccaaggagc agggcgtccg ttcggtggac
      301 gttcgcgtca agggccccgg tgccggccgt gagagcgcca tccgcgccct caacgccgca
      361 ggcatccagg tgaccagcat ccgcgacgtc acccccatcc cccacaacgg ctgccggccg
      421 cccaagcggc gccgggttta agagaggagg agagacatgg cacgttacac agacgccgtt
      481 tgccgcctct gccgccgcga gggcatgaag ctttacctga agggcgagcg ctgcttcaag
      541 gagaagtgct cgttcgagac ccgcaagggc aagatccccg gccagcacgg cgcggggaag
      601 atcaagaagc ccaccggcta cgccctgcag ctccgcgaga agcagaaggt gaagcgcatc
      661 tacggtgtgc tcgagaagca gttccgccac tacttcgaga aggccgacgc caagaagggc
      721 gtcaccggcc acaacctgct cgggttcctc gagtgccgcc tggacaacgt ggtctaccgc
      781 ctgggcttcg cgcccagccg ttcttccgcg cgccagatgg tcatgcacgg ccacgtgctg
      841 gtcaacggca agcgggtgga catcccctcc taccaggtga agcctggcca ggcggtggag
      901 ctgggcacgc gcgccaagga gaacgacggc gtcaagtcct ccgtcgagac ctccgccggc
      961 cgtggcattc ccaagtggct caccctggac gccgccgcct tcaagggaca ggtgcttgcc
     1021 gcgccgaccc gcgaggacat caccctcgat atcaacgagc agctgatcgt tgaattgtat
     1081 tccaagtaag ggggcaggat gctgaatctc agcgatttcc agaggccgcg cttcgccgaa
     1141 gtcacccctg ggtccctcac ggattcctac ggcgaattcg tggcctaccc cttcgagcgt
     1201 ggcttcgcca cgaccgtggg gcacagcgtc cgccgggtgc tgctcagcag catccagggc
     1261 gccgctgtca ccaacgtccg catcaagggc gtcatgcatg agttcacgac ccttccgggc
     1321 gtctgggagg acatcaccca cgtcctcctg aatctcaagg aagtgccctt caagctgcac
     1381 agcaccgagc cccaaacggt gaccatctcc gccaagggcg agggcacggt gacctccgcc
     1441 gccatccgct gcaaccagaa cgtggaggtc gtggatccca acatccacat cgccaccctg
     1501 ggcgaggaag gcgagctgga gatcgaaatg gtggtccgca tgggccgcgg tttcgtcacc
     1561 gccgaccgca accacgacga gagcctgggc ctgggtttca tccccatgga tgccaaccac
     1621 agccccatcc tccgggtgaa ctacatcgtc gagcccgccc gcgtgggcca gagcaccgac
     1681 tacgagaagc tcacgcttca ggtgtggacc aacggcgccg tcaaccccaa ggaagccgtc
     1741 tccgacgcgg ccctcatcct gcgcgagcac ttcctcatct ttgcccgcca ggacgagcag
     1801 gtggtggaaa ccgaaccggg acagaccatc ctcagcaccg agaacgtcaa cagcatgctg
     1861 ggcaagtccg tcgaggagct cgagctctcc gtccgggcca acaactgcct ccgcaacgcg
     1921 aacatcacca ccatcggcga gctggtccag cggaccgagg ctgagttgat gaaaaccaag
     1981 aacttcggca agaagtcgct ccaggagatc aaggacgagc tcgctcgtat cggcctctcc
     2041 ctcggcatgc ggctcgagca ggaagtgtaa ggagccccca tgcgtcacaa cgtttccggc
     2101 aagcgcctgg gccgcaccac caaccagcgc aaggccctca tgaagaacct ggcgaccgcc
     2161 ctcatcgaga gcgagcgcat cgagaccacc ctggtgaagg ccaaggagct ccgcagcttc
     2221 gtggaaccct tcatcaccct cgcgaagacc gacagcgtgg ccaatcgccg actggcgatg
     2281 gcccgcctcg gaagcaagga cgccgtgcag aagctcttcg gcgccgactt ccgcaagcgc
     2341 ttcgagagcc gccccggcgg ctacacccgc atcctcaaga tggcccaccg cctcggcgat
     2401 gcggccgaca tggccctcat cgagttcgtg gactacacgc tccccgagat caaggccgag
     2461 gacggcgagt agaccgtcac caccccatga aaacgccccg gacctccggg gcgttttcat
     2521 gcccgctcag ccgacggtcc agggcgcgtc gtcctcctcc ttcggctcgg gcggaaggtt
     2581 cgaggcacgg agccggaggg aacgcgccac ggtcacggtg cagggcgcct gggccgcgac
     2641 ctggctggag acgctgccca ggagggtgcg ccgcagcgag ctggcccggg cccccatcac
     2701 aaggtggtcc acgtggttgg cgctcacgta ctggaggatg gccgaggcgg ggtcgggtga
     2761 ttccaacacg tggtagctca cgcggccttc ctccagctcc agcgggatgg cccagctgcg
     2821 cagctcgaca aggcgctggt ggtggatgtt gcggccctgg gcgtcaaggg tctgatccag
     2881 cgtgatgcgg cccagcttga gcacgttcag gcaggcgacc cgcgccccgg gcagggtggt
     2941 gagcatccgg gccaccaggg tgcggagcgt gtcagcgatg ggcgcggcct caggcgagag
     3001 gtcgatggcg acggccagga taggcgcatc gccgtcgtgg cgtgcggggt tcttggccgt
     3061 gggcaccacg agttggtgat ccgcgaaccg gcgccggagg acggtcagga agggatcctg
     3121 cctcagcttt tcggcgcgca tcgtcagctt gatctggtcc gggtgctgaa gggccatggc
     3181 caggtggccc gaggtggggt accgccaggc cgggtggacc tccaggcagc ggaggatcac
     3241 ctcctgcagc cagggtgggc agtcggggcg cagcttccgg ggcggaactg ggtcccgcca
     3301 gagccgccgc ttcaggcctg cgagccgctg gggatcgccg aaggggcgtc gccccgtaag
     3361 gaagaagtac agcagcacgc cgagggcaaa ctggtcactg cggggatcgc ggcgatggcc
     3421 gagcacctgc tcgggcgcca tgtacggcgc ggttccatac ggcagtcgga actcctcgcc
     3481 catgaggtcg ggcagctcgt cgtggtgcga gaggccgaaa tcgaggagga caatctctcc
     3541 ggtgggccgg gtcatcaggt tggaaggctt cacgtcgagg tggaccacgt gctggcggtg
     3601 caggtcatcc agcgccacgg ccgcacggat gcccagggat gtcaccgcct ggatgggcag
     3661 cggaaggtgc ttcagcatgg ggaggaggga ggtgccgggg atgcgttcga agaccaggta
     3721 gggctgcagc ccgaagtcgc cctgggccac gtaccgcggc acatgagggc cgcccaggcg
     3781 aggcaggatc atctgctcca tctcaaagcc gacgatggcc gcgggatcga caccctcgga
     3841 catcttgggc accttcacca gcagcgggaa gttgtagccg ggatgggtcg cctcccatat
     3901 cgcggccata ccgccgcggt ggatccgctc gccgagccgg aagccatcca gaatgacgcc
     3961 aggttcgagg cgagtcggcg tcatggtcag cgtcccctct ttagccgcgc ggcgagcgat
     4021 ggcggaaggc ccgcgaggag gatggcctgg gcggtggcgt caacatcgta gggcacgcgc
     4081 cagtgggtga tctcggagcg atctgtgtca aaggtggcgt aggccgccgt cggatcgcca
     4141 tcccgcgact ggcccacggc cccgatgacg gagagccagc gccggtgcct cgagagcggg
     4201 atgggcacct tggcgacggg ctgaaaggac accagctggc cggtggcggt gatgccatgg
     4261 agggcgggca agtgggtgtg gccgcagaag accatctgcg cgcggctggc ctccaacgcg
     4321 cgcttcgcgg ccggtccgtc gtggatgtag atccacgctg gataggtctg gggactggc
//
LOCUS       DATGWW010000241         2101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_18294, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000241 DATGWW010000000
VERSION     DATGWW010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18294"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..>2101
                     /locus_tag="VK150_03630"
     CDS             84..>2101
                     /locus_tag="VK150_03630"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLP30427.1"
                     /translation="MVQFNTRANEILLKLVYYGPGLSGKTTNLQSLHAMCSDTQRGEM
                     FSVNTQEDRTLFFDLLPINLGYIYGNAIHLQIYTVPGQVQYDASRRVVLGGADGVVFV
                     ADSSEAKMQDNVDSLSNLYHNLNANRLNIKQIPFVIQYNKRDLPDAMAVGVMNRRLNF
                     RSVPYFESVANRGTGVLDTFLSITRETVGYTFKKYHLDKKIKDFDEMLNLIESNVRAG
                     MRELPPPQEAPSAPVVETTVLRHSNVSVADLVPGKVADAQELLEDALKSNMETARLYS
                     ELKQVKDTLEKKNDELSQLYSQLDRANQDNLKTRKYLEGLVQNIGEAVISFSADGKIL
                     TWNMAAERMFGYARPEIVGRSMAQLTPDGLLGELDQVAQQVSRGQVIRDMPTTRLRKG
                     GTAFPASITYAPVRGNDDRVLAYSALVRDTSEQKELQDRLVHSQKHEALGRLVPTLFH
                     EAANRLTPVLLEARLIAESAMDPHQAEQAARLVRAVDSVQSLLQPLQTVLNPPAPRLL
                     PVQLNQLVQEAVDLVDAKAQRMGTTLELNLEPDLPETALDPPLMVQALTNLLLNGLQS
                     MALSPIKRLRVATRRSGDSLQVVVQDSGSALPEARQGSLFDPAAAATTEALGLPVADI
                     IARQHGGHLSVRSQEGLGNAFLLDLPCAALPDAAPTGEAVGAGAPEPLA"
BASE COUNT          388 a          726 c          664 g          323 t
ORIGIN      
        1 ggggttgccg tagagacggg agaggcggct tgtcgcgcga ccccccgtgg taggcttgtc
       61 tccattaatt tcctggcaaa cccatggttc aattcaacac ccgcgccaac gagatcctgc
      121 tgaagctggt ctactacggg ccgggtctgt cgggaaagac gaccaacctg cagtccttgc
      181 acgccatgtg ctcggacacg cagcggggtg agatgttctc tgtcaacacc caggaggatc
      241 gcaccctctt cttcgacctg ctgccgatca accttggcta tatctacggc aacgccatac
      301 atttgcagat ctacaccgtg ccgggccaag tgcagtacga cgccagccgc cgggtggtgc
      361 tgggcggggc cgatggcgtg gtgttcgtgg ccgattccag cgaagccaag atgcaggaca
      421 acgtggactc gctgtcgaac ctgtaccaca acctcaatgc gaaccgcctg aacatcaagc
      481 agatcccctt cgtcatccag tacaacaagc gcgacctgcc cgacgccatg gccgtgggcg
      541 tcatgaaccg gcggctgaac ttccgcagcg tgccctactt cgagtccgtc gcgaaccgcg
      601 gcacgggcgt gctggacacc ttcctgtcca tcacccgcga gacggtgggc tacacgttta
      661 agaagtacca cctggacaag aagatcaagg atttcgacga gatgctcaac ctcatcgaat
      721 ccaatgtgcg cgccggcatg cgcgagctgc cgccacccca ggaggctccg agcgcgcccg
      781 tggtggagac cacggtcctg cgccacagca acgtcagcgt ggcggacctg gtgcccggca
      841 aggtggccga cgcccaggag ctgcttgagg acgccctcaa gtccaacatg gagacggccc
      901 ggctctactc ggagctgaag caggtcaagg acacgctgga gaagaagaac gacgagttga
      961 gccagctcta ttcccagctg gaccgggcca accaggacaa cctcaagacc cggaagtacc
     1021 tcgagggcct ggtgcagaac atcggcgagg ccgtcatctc cttttcggcg gacgggaaga
     1081 tcctcacgtg gaacatggcc gccgagcgca tgttcgggta cgcccggccc gagatcgtgg
     1141 gccggagcat ggcccagctg accccggacg gactcctggg cgaactggac caggtggccc
     1201 agcaggtgag ccggggccag gtgatccgcg acatgcccac cacccgcctt cgcaaaggag
     1261 gcacggcctt tcctgcgagc atcacctatg cgccggttcg gggcaacgac gaccgtgtgc
     1321 tggcctactc cgccctggtg cgcgacacca gcgagcagaa ggaactccag gaccgcctgg
     1381 tgcactcaca aaagcatgag gccctgggcc gcctggtgcc gaccctcttc cacgaggccg
     1441 ccaaccggct gaccccggtc ctgctggagg cgcggctcat cgccgagtcc gccatggatc
     1501 cgcaccaggc cgagcaggct gcgcgcctgg tgagggccgt ggattcggtc cagagcctac
     1561 tccagcccct gcagaccgtc ctgaacccgc cggccccccg gctgctgccc gtccagctga
     1621 accagttggt ccaggaggcc gtggacctgg tggatgccaa ggcgcagcgc atgggcacca
     1681 cgttggagct gaacctcgag ccggatcttc ccgagaccgc cctggatccg cctctgatgg
     1741 tccaggccct caccaacctg ctgctgaacg gccttcagag catggccctc agccccatca
     1801 agcggctccg ggtggccacg cgccgttccg gcgacagcct gcaggtggtg gtccaggaca
     1861 gcggctccgc gttgccggaa gcccgccagg gcagcttgtt cgacccggcc gccgccgcca
     1921 cgacggaagc cctgggcctc ccggtggccg acatcatcgc ccgccagcac ggagggcacc
     1981 tgagcgtgcg cagccaggag ggcctgggga acgcgttcct gctggacctt ccctgcgcgg
     2041 ccctcccaga cgctgctccg acgggcgagg ccgttggtgc aggcgcgccg gagcccctgg
     2101 c
//
LOCUS       DATGWW010000242         2177 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_427061, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000242 DATGWW010000000
VERSION     DATGWW010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427061"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..1618)
                     /gene="amrS"
                     /locus_tag="VK150_03635"
     CDS             complement(2..1618)
                     /gene="amrS"
                     /locus_tag="VK150_03635"
                     /inference="COORDINATES: protein motif:HMM:TIGR04337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system radical SAM enzyme"
                     /protein_id="HLP30428.1"
                     /translation="MARLAIAEALGEAPGPDRHDPGSDGPGASFVTLTVDGELRGCVG
                     GLSPHPSLAEGVRRHALAAAFDDPRFDALGPERLPRLTVEVSLLSPLCPVACASEADL
                     LRELRPGVDGLVLEAQGRTATFLPQVWESLPAPADFVAALKRKAGWGSRDWPAGMRAW
                     TYTAEAWRDEPRPAISTGPEGAGFLYPARHWHRLADSRLRCDVCPHGCALREGQRGRC
                     FLRQRQGNRLVLAGYGHTSGLCVDPIEKKPLHHFLPGSTTLSFGSVGCNLSCRNCQNW
                     RMSRSRDLGRLHERTAPGSVAATARRLGCLSVAFTYNEPAISLEFVTDVAEACHAEGL
                     ATVAVTAGYLKEAARRDLFEHLDAANVDLKFFREATYRQVTGGSLQPVLDTLRYLVHG
                     TDVWTEVTTLLIPGLNDSEAEVRQLSEWIADDLGVDVPLHFSAFHPDHRMLDVPPTPP
                     ATLRRARALAREAGLKHVYIGNIHDPEGATTYCPGCDQPVLRREGFGLLGRLVDAEGR
                     CERCGAQVSGRFDASAVGGARFASTPGPLR"
     gene            complement(1644..>2177)
                     /gene="amrB"
                     /locus_tag="VK150_03640"
     CDS             complement(1644..>2177)
                     /gene="amrB"
                     /locus_tag="VK150_03640"
                     /inference="COORDINATES: protein motif:HMM:TIGR04336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system protein B"
                     /protein_id="HLP30429.1"
                     /translation="GLALPEAGAFETPLGTVAVDTAMLGRIPQVRRSEAIHGSEHSLE
                     VQLPFIQRVAPRAKLVPLVAGQAPPRQVADVLETLWGGAETVVIVSSDLSHYLPDRLG
                     RAMDRETVRQILHLDTTLATERACGAVPVAGFLEVARRLKLHPVLLDLRNSGDATGDL
                     EEVVGYGAFAFFETGQP"
BASE COUNT          335 a          761 c          797 g          284 t
ORIGIN      
        1 ctcaccggag aggccccggc gtcgaggcga accgcgcacc cccgaccgcc gaggcgtcga
       61 atcggcccga cacctgagca ccgcagcgct cgcagcggcc ctcggcatcg accagtcggc
      121 ccaggaggcc gaagccttcc cgccggagca ccggctggtc gcagccggga caataggtcg
      181 tcgcgccttc cgggtcgtgg atgttgccga tgtagacgtg cttcaggcct gcctcccggg
      241 ccagggcccg ggctcggcgc agcgtggcgg gaggcgtggg cggcacgtcc agcattcggt
      301 ggtctgggtg gaaggcgctg aagtgtagcg ggacgtccac gcccaggtca tcggcgatcc
      361 actcggagag ctggcggacc tccgcctcgg aatcgttcag ccctggaatg agcagggtgg
      421 tgacttccgt ccacacgtcc gtcccgtgaa ccaggtatct cagcgtgtcg agcaccggct
      481 ggagggagcc tccggtcact tggcggtagg tcgcctcccg gaagaacttc aggtccacgt
      541 tggccgcgtc cagatgctca aagagatcgc gccgggcggc ctccttcagg tagcccgccg
      601 tcacggccac cgtggcgagg ccttccgcgt ggcaggcttc ggccacgtcc gtgacgaatt
      661 caagggagat cgccggctcg ttgtaggtga aggcgacgct gaggcagccc agccttcggg
      721 cggtggcggc cacggaacct ggcgcggtgc gctcgtgcaa ccggcccagg tcgcgggagc
      781 gggacatccg ccagttctgg cagttccggc aggacaggtt gcaacccacg gacccgaagg
      841 agagggtcgt ggatcccggc agaaaatggt ggaggggctt cttctcgatg ggatcgacac
      901 aaagcccgct ggtgtggccg tagcccgcga gcacgaggcg gttgccctgc cgctggcgca
      961 ggaagcaccg cccgcgctga ccttcccgga gggcgcaacc atgcgggcag acatcgcagc
     1021 gcaaccggct gtccgcgagc cggtgccagt gccgggccgg atacaggaag ccagcgccct
     1081 cggggccagt ggaaatggcg ggccggggct cgtcccgcca ggcttcggcg gtgtaggtcc
     1141 aggcccgcat gccggccggc cagtcgcgag agccccagcc cgccttgcgc ttgagggcgg
     1201 cgacgaaatc cgccggggcg gggaggcttt cccagacctg gggcaggaag gtggccgttc
     1261 ggccctgggc ttccaacacc aggccgtcca ccccgggccg cagctcccgg agcaggtcgg
     1321 cctcgctcgc gcaggccacg gggcacagcg gcgagaggag ggagacttcc accgtcagcc
     1381 gtgggagccg ctccgggccc agggcatcga agcggggatc gtcgaaggcg gcggcaaggg
     1441 cgtgccgccg gactccctcc gccagcgacg gatgcggcga gagcccaccc acgcagcctc
     1501 gcagctcacc atccaccgtg agggtcacga aggaggcccc gggaccgtcg gagccggggt
     1561 cgtgccggtc gggcccgggt gcctcgccca gggcctcggc gatggccagg cgggccattc
     1621 gcgcaagccg ggagccgtcc cgctcagggc tgcccggttt caaagaaggc gaaggcccca
     1681 taaccgacca cctcttccag gtcgcccgtc gcgtcgccgg agttccgcag gtccagcagc
     1741 accgggtgca gcttcaggcg cctggcgacc tcgaggaagc cggccacggg aacggccccg
     1801 caggcgcgct cggtggccaa ggtcgtgtcc aggtgcaaga tctggcggac agtctcccga
     1861 tccatggccc ggccgaggcg gtccggcagg tagtgggaca ggtctgagct cacgatgacc
     1921 accgtctccg ccccgcccca gagggtttcc agcacgtccg ccacctggcg gggcggcgcc
     1981 tgccccgcga ccagggggac gagcttcgcc ctgggcgcca cccgttggat gaagggcagc
     2041 tgcacctcca gggaatgctc agagccatgg atggcctcgc tgcggcgcac ctgggggatg
     2101 cgccccagca tcgccgtgtc cacggccacg gtccccagcg gcgtctcgaa ggccccggcc
     2161 tcgggcaggg ccaggcc
//
LOCUS       DATGWW010000243         1535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_145132, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000243 DATGWW010000000
VERSION     DATGWW010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145132"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..453)
                     /locus_tag="VK150_03645"
     CDS             complement(<1..453)
                     /locus_tag="VK150_03645"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HLP30430.1"
                     /translation="MQDTTILLTFGLATLVAMLLSWLALFSVVQGKDRVLREQRRAFE
                     AEQRLRLAEEAFTDNAHHELRTPLQILTGQLQMLRDLDPTPDQAAILDRAQQSATQLG
                     HLVQGLLDLSSLGHGTLAIHPALTDLGAHLASLARCFELGAAAKGLELR"
     gene            complement(429..1103)
                     /locus_tag="VK150_03650"
     CDS             complement(429..1103)
                     /locus_tag="VK150_03650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30431.1"
                     /translation="MDVRTLHRWILHYIIDPSILAPVAAYAWSRYRGGYQRPPWLRPF
                     FQLQVLDLIQGVIFISMAMAHRNNQWFRHIVQPVVFTGLLWVLARTAEEGPRRRILFL
                     ACTAAGLLAAVAGVFVNGLFWRNALFMTTQSLIFAGLGVYELRRLFTSPEGGSLKHRP
                     EFWLAAALLVYGASALIFSATSNVLLRNLPPNLVLAPWLLNGMVVLFYELALAKVFLC
                     RTPPSS"
     gene            complement(1117..1449)
                     /locus_tag="VK150_03655"
     CDS             complement(1117..1449)
                     /locus_tag="VK150_03655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30432.1"
                     /translation="MPDSAFDPTRDHLISRPEAADLVLNFQSRSDAGAHFASAFNRSA
                     FEKLLGQPGAAGIRIYLAQHADGSPTMVMVAVDAKGVDLSDPTCLFAQNSHDCPPDCA
                     GSLLSKTS"
BASE COUNT          267 a          451 c          593 g          224 t
ORIGIN      
        1 ccgcagctcg aggcccttgg ccgccgcgcc cagctcgaag cagcgggcga ggctggccag
       61 gtgggctccc aggtccgtga gggcgggatg gatggcgagg gttccgtggc caaggctgga
      121 gagatcgagc aggccctgca ccaggtggcc gagctgggtg gcggattgct gggcccggtc
      181 gaggatcgcg gcctggtcgg gcgtgggatc caggtcgcgc agcatctgca gctgtccggt
      241 gaggatctgg agaggggtgc gcagctcgtg gtgggcgttg tcggtgaacg cctcctcggc
      301 cagccggagt cgctgctcgg cctcgaaggc ccggcgctgc tcgcggagaa cgcgatcctt
      361 tccctgcacc acgctgaaga gggcgagcca gctgagcagc atcgcgacca gggtcgcgag
      421 gccgaaggtc aggaggatgg tggtgtcctg cacaggaata cctttgccag ggcgagctcg
      481 tagaaaagga ccaccattcc gttcagcagc cagggcgcca ggaccagatt gggcggcagg
      541 ttgcggagga ggacgttcga ggtggcgctg aagatcaggg ccgaggcccc atagaccagg
      601 agggctgccg ccagccagaa ttccggccgg tgcttgaggg atccgccctc cggggaagtg
      661 aacagccgcc gcagctcgta gacgccgagg cccgcgaaga tgaggctctg ggtggtcatg
      721 aacagcgcgt tccgccagaa caggccgttc acgaacacgc ccgccacggc ggccaggagg
      781 ccggccgccg tgcaggccag gaacaggatc cggcgccgcg ggccttcctc ggccgtgcgg
      841 gccaggaccc agagcaggcc cgtgaacacg acgggctgga cgatgtgccg gaaccactgg
      901 ttgttccggt gggccatggc catcgagatg aagatcacgc cttggatgag gtccagaacc
      961 tggagttgga agaaggggcg gagccagggg ggccgctggt agcccccccg gtagcggctc
     1021 caggcatagg ccgccacggg cgccaggatc gacggatcaa tgatgtagtg gagaatccat
     1081 cgatgaaggg tccggacgtc catggtgccg cgtcagtcag gaggtcttgg acaggaggga
     1141 cccggcgcag tcgggcgggc agtcgtgcga gttctgggcg aacaggcagg tcgggtcgct
     1201 caggtccacg cccttcgcgt ccaccgccac catcaccatc gtgggagaac cgtccgcatg
     1261 ctgggccagg tagatgcgga tgcccgcggc gcctggctgt ccgagcagct tctcgaaggc
     1321 gctgcggttg aaggccgagg cgaagtgggc gccggcgtcc gaccgggact ggaagtttag
     1381 gaccagatcc gccgcctcgg ggcgggagat caaatggtcg cgggtgggat cgaaggcgct
     1441 gtcgggcatg gccgggctcc tttagaggtg gcctgagcgt ggatgggatg gaaggggatt
     1501 gcccttccat cagatccgaa ggccgccgac ttctc
//
LOCUS       DATGWW010000244         1731 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_145183, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000244 DATGWW010000000
VERSION     DATGWW010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145183"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..>1731
                     /gene="cimA"
                     /locus_tag="VK150_03660"
     CDS             168..>1731
                     /gene="cimA"
                     /locus_tag="VK150_03660"
                     /inference="COORDINATES: protein motif:HMM:TIGR00977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043714 - (R)-citramalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citramalate synthase"
                     /protein_id="HLP30433.1"
                     /translation="MSKVKIYDTTLRDGSQAKGISFSLEDKLAVARKLDEFGVDYIEG
                     GWPNPTNVLDVEFFKRAAAMEWKHARIAAFGSTCRPKAHPKDDLVLRHLVESKAPVIT
                     LFGKSWDLHVTDVIRTTLEENLRMIRDSVAWLKENCEEVVYDAEHFFDGFAANPEYAL
                     KTLEAARDGGADCIVLCDTNGGMLPWKVEEVTALVKSRLKTNLGIHAHNDTGTAVANA
                     LAAVKAGALQVQGTVNGYGERCGNANLTVIIPALQLKMGHEVVPADRLQGLRSLSLSI
                     SELANLQDDIRQPYVGEAAFAHKGGAHIDGVMKLARSFEHIDPSLVGNARDFIVSNQS
                     GSSLVWDKIRAIQPDLDKRSPQVAAILSEVKQREEEGWHFEIADASFQILARRKLEMW
                     KDRFEFLGFRSIEERRENGDIYSEFTIKLKVDGQVEHTAAEGNGPVDAMNSAVRKALT
                     RFFPQLRDIELVDFKVRVLDNNKGTGAKVRVWTRFLDHSRPDQEPWGTLGVSTNVIEA
                     SWMALLDGINYKL"
BASE COUNT          333 a          570 c          542 g          286 t
ORIGIN      
        1 ggaatgaggt aggcccggag cggttgcgtt cggtccttgt cgtccttcga attatggccc
       61 tgccccggag cggacttcgg taggtttgga gcctgcccga tgaacaaagc ccgctcctcc
      121 gagcgggctt ttgttttttc cggcgcggaa atgaaaaggc ggatacgatg agcaaggtca
      181 agatctacga caccaccctt cgggacggca gccaggccaa gggcatctcc ttctccctgg
      241 aggacaagct cgccgtcgcg cgcaagctcg acgaattcgg ggtggactac atcgagggtg
      301 ggtggcccaa ccccaccaat gtcctcgacg tggagttctt caagcgggcc gccgccatgg
      361 aatggaagca cgcgcgcatc gccgccttcg gcagcacctg ccgccccaag gcccatccca
      421 aggacgacct ggtcctgcgc cacctggtgg agtccaaagc tccggtgatc accctcttcg
      481 gcaagagctg ggatctgcac gtaaccgatg tgatacgtac gaccctggag gagaatctcc
      541 gcatgatccg cgactcggtc gcctggctca aggagaattg cgaggaggtg gtctatgacg
      601 ccgagcactt cttcgacggt ttcgccgcca atcccgagta cgcgctcaag accctggagg
      661 cggcccggga cggcggcgcg gactgcatcg tcctctgcga caccaacggc ggcatgctgc
      721 cctggaaggt ggaggaggtg accgccctgg tgaagtcccg cctcaagacg aatctcggca
      781 ttcacgccca taacgatacc ggcaccgcgg tggcgaacgc cctggcggcc gtgaaggccg
      841 gcgccctgca ggtgcagggc acggtgaacg gctacggcga gcgctgcggc aacgcgaacc
      901 tcaccgtcat catccccgcc ctgcagctca agatggggca cgaggtggtc cccgcggaca
      961 ggctccaggg cctgcgctcc ttgagcctgt ccatctccga gctggccaac ctccaggacg
     1021 acatccgcca gccctatgtc ggcgaggccg ccttcgccca caagggcggg gcccatatcg
     1081 acggggtcat gaagctggcc cgcagcttcg agcatatcga tccgtccctc gtgggcaacg
     1141 cgcgggactt catcgtctcc aaccagagcg gctcaagcct cgtctgggac aagatccgcg
     1201 ccatccagcc cgacctcgac aagcgcagcc cccaggtggc agccatcctt tccgaggtga
     1261 agcagcgcga ggaggagggc tggcatttcg aaatagccga cgcctccttc cagatcctcg
     1321 cccgccgcaa gctggagatg tggaaggacc gcttcgagtt cctgggcttc cgttccatcg
     1381 aggagcggcg ggagaacggc gatatctatt ccgagttcac catcaagctc aaagtggacg
     1441 gtcaggtgga acacactgcc gccgagggca atggcccggt ggacgccatg aactccgcgg
     1501 tgcgcaaggc cctcacgcgc ttcttccccc agctcaggga catcgagctc gtcgacttca
     1561 aggtgagggt gctcgacaac aacaagggta cgggggccaa ggtgcgtgtc tggacgcgct
     1621 tcctcgacca cagccgcccg gatcaggagc cctggggaac cctgggcgtc tccaccaacg
     1681 tcatcgaagc gtcctggatg gcgctgctcg acggcatcaa ctataagctg a
//
LOCUS       DATGWW010000245         3512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_18774, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000245 DATGWW010000000
VERSION     DATGWW010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3512
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18774"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1040
                     /gene="speA"
                     /locus_tag="VK150_03665"
     CDS             <1..1040
                     /gene="speA"
                     /locus_tag="VK150_03665"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF003763.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HLP30434.1"
                     /translation="GGGLGVDYDGSRTTFSSSMNYTVDEYASDVVYTTQDVCAQEQVP
                     TPNLISESGRAVSAFHEVVVVDIIGLIDTTHTRYRVELTGNEPQVLKELAYTRDNISV
                     KNFAEMYHDAITQKDELLTLFNLGYLGLEDRSKGETLFWEVCRKLSRILSSKSLKYVP
                     EEFQDLNKSLADKLIANFSIFQSMPDHWAIEQLFPVMPIHRLKEKPGLSATLCDITCD
                     SDGKMEKFIDLKDVRDEIPFHEPRGGESYYVAFFLTGAYQDILGMRHNLFGAPNEAHI
                     MVHEDDTFKVQHIVKGDTVDHVLRSVHYDPDVLIQGPQTKRKASAKNDAAEALRALLT
                     EQRSLHTYLEI"
     gene            complement(1054..1536)
                     /locus_tag="VK150_03670"
     CDS             complement(1054..1536)
                     /locus_tag="VK150_03670"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: protein motif:HMM:NF025793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HLP30435.1"
                     /translation="MTANQDVHRFMGRAIELSREHMEAGDGGPFGAVIVKGGVVVGEG
                     WNRVTSTHDPTAHAEVVAIRAACARLATFELRGCEIYTSCEPCPMCLAAIYWARLDRI
                     WYANDRADAAAIHFDDAWLYREVALPVGARSLPATQLMREEALTVFRAWEQKADKVPY
                     "
     gene            complement(1604..2086)
                     /locus_tag="VK150_03675"
     CDS             complement(1604..2086)
                     /locus_tag="VK150_03675"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HLP30436.1"
                     /translation="MIGPLKELLAHQAWADAVFFHAWAASGTQGDPELRTRADHQIAV
                     QEAFLRVLKGDVVSAPEQPLPEYGALKARCRSAHEVLRALGRGLDDASLARTVRVPWF
                     PDPPCVITVMEALLQVCLHTQHHRGQNMARLKALGAAPKNVDFIIWLWKQKPEGRWPD
                     "
     gene            2208..3095
                     /locus_tag="VK150_03680"
     CDS             2208..3095
                     /locus_tag="VK150_03680"
                     /inference="COORDINATES: protein motif:HMM:NF005875.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HLP30437.1"
                     /translation="MDIQCVGIVGCGLMGSGIAQCAAEAGCQVLVKEADEAFLAKGLA
                     RIHGAWERSVAKGKATPEQRESWLGNLRGTLAFPDLAACDLVVEAIPEHLDLKLKTFA
                     ELDQVLSASALLCSNTSSLSVAQLSPALSPERLPRLAGLHFFNPVPAMPLVEIVRTLA
                     TGDDTLAALRAFVQKLGKTGVLAPDAPGFIVNRLLVPYLLDAMRCAEQRLAGVDDLDQ
                     GMKLGCGHPMGPLHLSDFIGLDTMQSVADVLFDAFGESRFKAPALLRQLVAAGRLGRK
                     SGSGFYRWEGEKRMEALPL"
     gene            3119..3469
                     /locus_tag="VK150_03685"
     CDS             3119..3469
                     /locus_tag="VK150_03685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30438.1"
                     /translation="MLDLLLIPAALLLALALRAVRRGEHRLHGHLMVATVTVVLLRVL
                     LHPRTLAAHHLALWLILLGAAGGTLLLGRAALAWREGRSQRAGLPRLHRAAGAFTLLL
                     TAFTLAVWFLRDRS"
BASE COUNT          553 a         1275 c         1143 g          541 t
ORIGIN      
        1 tgggcggcgg cctcggggtc gactacgacg gttcgcgcac caccttcagc tccagcatga
       61 actacaccgt ggacgagtac gcctccgacg tggtctacac cacccaggac gtgtgcgccc
      121 aggagcaggt gcccaccccc aacctgatca gtgagagcgg ccgcgccgtg agcgccttcc
      181 acgaggtggt ggtggtcgac atcatcggcc tgatcgacac cacccacacc cgctaccggg
      241 tggagctcac cggcaacgag ccgcaggtgc tcaaggagct ggcctacacc cgcgacaaca
      301 tctccgtgaa gaacttcgcc gagatgtacc acgacgccat cacccagaag gacgagctcc
      361 tcaccctctt caacctgggc tacctggggc tggaggaccg cagcaagggc gagaccctgt
      421 tctgggaagt gtgccgcaag ctgtcgcgca tcctcagcag caagagcctg aagtacgtgc
      481 ccgaggaatt ccaggacctc aacaagagcc tggccgacaa gctcatcgcc aacttcagca
      541 tcttccagtc gatgcccgac cactgggcca tcgagcagtt gttcccggtc atgcccatcc
      601 accggctcaa ggagaagccc gggctctccg ccacgctctg cgacatcacc tgcgacagcg
      661 acggcaagat ggagaagttc atcgacctga aggacgtgcg ggacgagatc cccttccacg
      721 agccccgggg cggcgagtcc tactacgtgg ccttcttcct cactggcgcc taccaggaca
      781 tcctcggcat gcggcacaat ctgttcgggg cgcccaacga ggcgcacatc atggtccacg
      841 aggacgacac cttcaaggtg cagcacatcg tgaagggcga caccgtcgac cacgttctgc
      901 gcagcgtcca ctacgatccc gacgtgctga tccaggggcc gcagacgaag cggaaggcca
      961 gcgccaagaa cgacgcggcc gaggccctgc gcgccctgct caccgagcag cggagcctgc
     1021 acacctacct ggagatctga gccccgcccg gcctcagtag gggaccttgt ccgccttctg
     1081 ctcccaggcc cggaacaccg tgagcgcctc ctcccgcatc agctgggtgg cggggaggct
     1141 ccgcgcgccg acgggcagcg ccacctcccg atagagccac gcgtcgtcga agtggatggc
     1201 cgcggcgtcg gcacggtcgt tggcgtacca gatgcggtcc agccgcgccc agtagatggc
     1261 ggccaggcac atcgggcagg gttcgcagct ggtgtagatc tcgcagcccc gcagctcgaa
     1321 ggtggccagc cgggcgcagg cggcgcggat ggccacgacc tccgcatggg ccgtcggatc
     1381 atgggtggag gtgacccggt tccagccctc ccccacgacc accccgccct tcacgatcac
     1441 cgcgccgaag ggcccgccgt cgccggcctc catgtgttcc ctggacagct cgatggcccg
     1501 gcccatgaat cggtggacat cctggttcgc ggtcatggcc ggctccctga tggggacaga
     1561 tccattctcc cacctttcga ccaggcccgc aggccgcgga gggtcaatca ggccagcgcc
     1621 cctccggctt ctgcttccag agccagatga tgaaatccac gttcttcggc gcggcgccca
     1681 gggccttgag gcgggccatg ttctggcccc ggtggtgctg ggtgtggagg cagacctgca
     1741 gcagggcctc catcacggtg atcacgcagg gcggatccgg gaaccagggc acccggaccg
     1801 tgcgggctag ggaagcgtca tccagccccc ggcccagggc gcgcagcacc tcgtgggctg
     1861 aacggcagcg cgccttcagg gccccgtact cgggcagggg ttgctcggga gcggacacca
     1921 cgtcgccttt cagcacccgg aggaaggcct cctgcacggc gatctggtgg tcggcgcggg
     1981 tccgcagctc cggatcaccc tgggtgcccg aggcggccca ggcgtggaag aacaccgcgt
     2041 cggcccaggc ctggtgcgcg aggagctcct tcagtggccc gatcatgttt cctccggaag
     2101 gcggcttgga ttctactccg cctgaaccta cccgaggtcg cctggcccgg ccccggtgat
     2161 ttccccgaga atgggagcct catccccgga atcatcagga ggcaggcatg gacatccagt
     2221 gcgtcggcat cgtcggttgc gggctcatgg gctcgggcat cgcccagtgc gccgcggagg
     2281 cgggttgcca ggtgctcgtg aaggaggcag acgaggcctt cctggccaag ggcctggccc
     2341 gcatccatgg cgcctgggag cgctccgtcg ccaaggggaa ggccacgcct gagcagcgtg
     2401 aaagctggct cgggaacctc cgcggcaccc tcgccttccc ggacctggcg gcctgcgacc
     2461 tggtggtgga ggccattccc gaacacctcg acctcaagct gaagaccttc gcggagctgg
     2521 accaggttct cagtgcgtcc gccctcctct gcagcaacac ctccagcctc tccgtggccc
     2581 agctcagccc cgccctgtcg ccggaacggc tgccccggct ggcgggcctg cacttcttca
     2641 accccgtccc cgccatgccc ctggtggaga tcgtccgcac cctcgccact ggagacgaca
     2701 cgctggccgc cctgcgcgcc ttcgtccaga agctcggcaa gaccggcgtg ctggcaccgg
     2761 atgccccggg cttcatcgtg aaccggctgc tggtgcccta cctgctggac gccatgcgct
     2821 gcgccgaaca gcggctggca ggcgtcgacg acctcgacca gggcatgaag ctcggctgcg
     2881 ggcatcccat gggcccgctc cacctgagcg acttcatcgg cctggacacc atgcagagcg
     2941 tcgcggatgt gctcttcgat gccttcggcg aatcccgctt caaggccccg gccctgctgc
     3001 gccagctggt ggccgcgggc cgcctgggcc gcaaatccgg gtcgggcttc taccgctggg
     3061 aaggcgagaa acggatggag gccctcccgc tctgagcgcc gggtgtagtc tggcggccat
     3121 gctggacctc ctcctgattc ccgccgccct cctgctggcc ttggccctcc gcgcggtgcg
     3181 acggggcgag caccggctcc atggtcatct gatggtggcc acagtcaccg tggtcctgct
     3241 gcgcgtgctg ctgcaccccc gcacgctcgc cgcccaccac ctggcgctct ggctgatcct
     3301 cctgggcgcg gcgggcggca cgctgctgct ggggcgcgcg gcgctcgcct ggcgggaggg
     3361 gcggagccag cgggccggcc tcccgcgcct ccaccgcgcc gcgggggcct tcaccctgct
     3421 gttgacggcc ttcacgctcg ccgtgtggtt cctgcgcgac cggagctgag gccccgggtc
     3481 atcaccaggg atcctggacc gtcttgccgg cc
//
LOCUS       DATGWW010000246         1711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_18850, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000246 DATGWW010000000
VERSION     DATGWW010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18850"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1711
                     /locus_tag="VK150_03690"
     CDS             <1..>1711
                     /locus_tag="VK150_03690"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="secretin N-terminal domain-containing protein"
                     /protein_id="HLP30439.1"
                     /translation="IPSFAPIRTCLVVAATLLLTLGCTLHRANKAFDEGRFDEAVMEY
                     RAVLRNDPTNTKARIGIKRASQRAAEGHLALARQAEGRGFSDTVLSEVRKALVLDPDN
                     QVAQDWLIRLETKAAREKAEADSAEDIEEMKAKADSQNVLQLNPRSIEGIDLNFSRRT
                     SLREIFGTLSRASGVNIIPHSSFQDQTVSIDLRGLPFQRVLDTLMLQNDLFYKVIEKN
                     TIMIFKATPQNREQFENQLIKTYYLANADPQDVRQTLTTINNQLRVFTDKRMNAVIVK
                     AKPLELAIVDQVIRTLDKAKAEVMVYLELMEVTENSLEQIGLLPVLNASDTSGTYRMG
                     ATTVNNTSGMNTNSGFTKIHTADIRVLFPNLALDFLKSNGDARLVASPNVRVLSGETG
                     EVNIGEKISTTQSQLSLPTTGSTSTASASSLLGGVGQTSFSYEDVGVKIKVEPRVHHN
                     GEITLKIDSTVTTLKSGSTPGRPDLGKREIKTSARLRDGETAIFGGLLKDEEQKSLQG
                     IWGLADIPFIGRLIGNTRNSKAKTDVILTIRAVLVRKPDLSEQDMAPFNPDDATARSG
                     PFNP"
BASE COUNT          348 a          628 c          497 g          238 t
ORIGIN      
        1 gattccctcc ttcgccccga ttcgcacgtg cctggtcgtt gcggcgaccc tgctgctgac
       61 cctcggctgc accctccacc gggccaacaa ggccttcgac gagggccgct tcgacgaggc
      121 ggtgatggaa taccgcgccg tgctccgcaa cgaccccacc aacacgaagg cgcgcatcgg
      181 catcaagcgt gcctcccagc gcgccgcgga aggccacctc gccctcgccc gccaggccga
      241 ggggcgcggc ttctccgaca cggtgctttc cgaggtccgc aaggccctgg tgctagatcc
      301 cgacaaccag gtggcgcagg actggctcat ccgcctcgag acgaaggcgg cccgggagaa
      361 ggcggaggcg gattcggccg aggacatcga ggagatgaag gccaaggccg acagccagaa
      421 cgtcctgcag ctcaacccgc gctccatcga aggcatcgac ctgaacttca gtcggcgcac
      481 cagcctgcgg gagatcttcg gaaccctcag ccgggcctcg ggggtgaaca tcatccccca
      541 cagctccttc caggatcaga ccgtctccat cgacctgcgc ggtctgccct tccagcgcgt
      601 gctggacacg ctgatgctgc agaacgacct gttctacaag gtgatcgaga agaacaccat
      661 catgatcttc aaggccacgc cgcagaaccg cgaacagttc gagaaccagc tcatcaagac
      721 ctactacctg gccaacgccg atccccagga cgtccggcag accctcacca ccatcaacaa
      781 ccagctgcgc gtcttcaccg acaagcgcat gaacgccgtc atcgtgaagg ccaagcccct
      841 ggagctggcc atcgtggacc aggtgatccg caccctggat aaggccaagg ccgaggtcat
      901 ggtctacctc gagctcatgg aggtcaccga gaacagcctg gagcagatcg gcctgctgcc
      961 ggtgctgaac gcgtccgaca cctccggcac ctaccgcatg ggcgccacca cggtgaacaa
     1021 cacctcgggc atgaacacca actcgggctt caccaagatc cacaccgccg acatccgggt
     1081 gctgttcccc aacctggcgc tcgacttcct caagagcaac ggcgacgccc gcctggtggc
     1141 cagcccgaac gtgcgcgtgc tgtcgggcga gaccggcgag gtcaacatcg gcgagaagat
     1201 ctccaccacc cagagccagc tctccctgcc aaccacgggc agcaccagca ccgcctcggc
     1261 gtcctccttg ctgggcggcg tgggccagac ctccttctcc tacgaggacg tgggcgtgaa
     1321 gatcaaggtc gaaccccgcg tccaccacaa cggcgagatc acgctgaaga tcgacagcac
     1381 ggtcaccacg ctgaagtccg gctccacgcc gggccggcct gacctgggca agcgcgagat
     1441 caagacctcg gcccgcctgc gcgatggcga gaccgcgatc ttcggcggcc tgctgaaaga
     1501 cgaggagcag aagagcctgc agggcatctg ggggctggcc gacatcccct tcatcgggcg
     1561 cctcatcggc aacacacgga actcgaaagc gaagacggac gtgatcctca ccatccgcgc
     1621 cgtgctggtc cgcaagcccg acctgtcgga gcaggacatg gcgcccttca atcccgacga
     1681 cgccaccgcc cggtccggcc ccttcaaccc c
//
LOCUS       DATGWW010000247         1705 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_18886, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000247 DATGWW010000000
VERSION     DATGWW010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18886"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VK150_03695"
     CDS             complement(<1..195)
                     /locus_tag="VK150_03695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30440.1"
                     /translation="MRIPDSLSAFFQRWRRLVLVLTGIYGLWLLAGFFLVPALVRPRI
                     EREGTRALKRPVTVAKLRFNP"
     gene            350..1669
                     /locus_tag="VK150_03700"
     CDS             350..1669
                     /locus_tag="VK150_03700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic 2,3-diphosphoglycerate synthase"
                     /protein_id="HLP30441.1"
                     /translation="MATRRVVILGAAGRDFHNFNTVYRDNPDYQVVAFTATQIPDIAG
                     RRYPAELAGKLYPKGIPIFDESELVSLIEREKPDAAVFSYSDVTHATVMHLASLCIAH
                     GVDFELLGADKTMITSSKPVIGITAVRTGAGKSQTTRFISNILKKLGKKVVAIRHPMP
                     YGDLAKQACQRFADYADLDKHECTIEEREEYEPHIDNGFVVYAGVDYEQIIRSAEKEA
                     DVILWDGGNNDLPFYKSDLHICIADPLRSGHEMAYHPGEANFRRADLIIINKCDSAKE
                     ADIVAIEQNAAAVNPKARVIRANSPVTCDQPEMVKGKRALVIEDGPTLTHGSMSYGAG
                     VVAARAAGAKEIVDPTPYAVASLAATYRKYPNAKGILPAMGYGDQQVKDLQATIEATP
                     CDVVLSGTPIDLTRVLKVTKPMTRVRYDLAEIRAGLVEAEIKKTLRM"
BASE COUNT          344 a          607 c          520 g          234 t
ORIGIN      
        1 ggggttgaac cgcagcttcg ccacggtgac cgggcgcttc agggcccggg tgccctcccg
       61 ctcgatccgg ggccggacca gggcgggaac caggaagaat cctgccagga gccacaggcc
      121 gtagatgcct gtcaggacca ggaccaggcg ccgccagcgt tggaaaaagg ccgagagaga
      181 gtctggaatg cgcatggcaa aagcatagac ccttcccgga tctgtgattc aagccacaac
      241 cccgttctca tcccctcctc aagggggcta tcctccctgg gtcgcggaac ggccaggact
      301 gccacccccg agcgtgtcgg ccctccgctg gaccgaaagg ttatgtgtca tggcgacacg
      361 acgcgtggtg atcctgggag ccgctggccg cgacttccac aatttcaata ccgtgtaccg
      421 ggacaatccg gactaccagg tggtggcctt caccgccacc cagatccccg acatcgccgg
      481 gcgccgctac cccgcggaat tggccgggaa gctgtacccc aagggcatcc ccatcttcga
      541 cgaatccgag ctcgtgagcc tgatcgagcg cgagaagccg gacgcagccg tgttctccta
      601 ctcggacgtg acccacgcca ccgtgatgca cctggccagc ctctgcatcg cccacggggt
      661 ggacttcgag ctgctcggcg ccgacaagac gatgatcacc tccagcaagc ccgtcatcgg
      721 catcacggcc gtgcgcaccg gcgcgggcaa gagccagacc acccgcttca tcagcaacat
      781 cctcaagaag ctcggcaaga aggtggtcgc catccgccat cccatgccct acggcgacct
      841 ggcgaagcag gcctgccagc gcttcgccga ctacgccgac ctcgacaagc acgagtgcac
      901 catcgaggag cgcgaggagt acgagccgca catcgacaac ggcttcgtgg tctacgccgg
      961 cgtggactat gagcagatca tccgcagcgc cgagaaggag gcggatgtga tcctctggga
     1021 cggcgggaac aacgacctgc ccttctacaa gagcgatcta cacatctgca tcgccgaccc
     1081 cctgcgttcc ggtcacgaga tggcctatca cccgggcgag gccaacttcc gccgcgcgga
     1141 cctcatcatc atcaacaagt gcgacagcgc caaggaagcc gacatcgtcg ccatcgagca
     1201 gaacgccgcg gccgtgaacc ccaaggcccg ggtcatccgc gccaacagcc ccgtcacctg
     1261 cgaccagccg gagatggtca agggcaagcg cgccctcgtc atcgaggacg gccccaccct
     1321 cacccacggc tccatgtcct acggcgccgg cgtggtggcc gcccgggccg ccggggcgaa
     1381 ggagatcgtc gacccgaccc cctacgccgt ggcgagcctc gccgccacct accgcaaata
     1441 cccgaacgcc aagggcatcc tgcccgccat gggctacggc gatcagcagg tgaaggacct
     1501 gcaggccacc atcgaggcca cgccctgcga cgtggtgctc agcggcacgc ccatcgacct
     1561 cacccgcgtg ctgaaggtca ccaagcccat gacccgcgtt cgctacgatc tggcggagat
     1621 ccgcgcgggt ctggtggaag cggagatcaa gaagaccctc cgcatgtagg ttggaggaac
     1681 gggagcggga gggatccacg gagcc
//
LOCUS       DATGWW010000248         2861 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_145319, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000248 DATGWW010000000
VERSION     DATGWW010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2861
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145319"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(19..1200)
                     /locus_tag="VK150_03705"
     CDS             complement(19..1200)
                     /locus_tag="VK150_03705"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HLP30442.1"
                     /translation="MSEVGANYVAPLQQLLRTMVEYGGTDLHITTETAPQIRIDGRMV
                     PLKLPPLDAAQTRWLCYGVMTDQQKHRLEEDLEVDFSFGLQGVARFRANVFNQRGATA
                     GVFRTIPENIRSFDQLGLPPSVQALTDKPRGLVLVTGVTGSGKSTTLAAMVDKINAEE
                     PVHILTIEDPVEYVHKHRRALVNQREIHADTHSFKKALRSALRQDPDVVLVGELRDLE
                     TIESALTIAETGHLTFGTLHTNSTVQTINRIIDVFPSHQQPQIRAQLSLVLEGVICQS
                     LIPKASGKGRALALEIMIPNPAIRNLIREDKIHQIYGVMQSGQQKYGMQTFNQSLSDL
                     VIRKEITQDQAFEYSSNTDELRELINRGVGVGAAGGRAAAPAQPASTVLGGRNPNIKY
                     T"
     gene            complement(1213..>2861)
                     /gene="pilB"
                     /locus_tag="VK150_03710"
     CDS             complement(1213..>2861)
                     /gene="pilB"
                     /locus_tag="VK150_03710"
                     /inference="COORDINATES: protein motif:HMM:TIGR02538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HLP30443.1"
                     /translation="QWPPIDPGVIALIPKDLAQRHKVLPLQRTGNVLTLAMSDPTDIF
                     AMDDVRFHTGYNVDPVVSSEMGLARAVEKYYGGASAVRLSDGTVARGTQGAGGTSGPG
                     GATTTSPGQNFDAEDEHFDLADLEQELDADAEYDATEDDEDSVNVGSLKRGSEDAPVV
                     KLVNMVLIDAIKRGASDIHIEPYEKTYRIRFRIDGILMEVMRPNLKLKDPLTSRVKIL
                     AKLNIAERRLPQDGRIKLRVNMGGKQKVIDYRVSILPTLFGEKIVLRLLDSDKLMLDL
                     TKLGFEQESLDRWDRQISKPYGMVLVTGPTGSGKTNTLYSSIAKLNTVDTNIMTAEDP
                     VEFNFPGINQVQMKEQIGLNFAAALRSFLRQDPNIILVGEIRDFETAEIAIKASLTGH
                     LVLSTLHTNDAPSTINRLMNMGVEPFLVATSVNIICAQRLVRRLCSNCKAVEAHQQPP
                     EALYKVGFTPEEVERGITFYKPVGCETCNKRGYKGRVGLYEVLEMSETLKDMILTGAS
                     AIELREQGQKEGMITLRRSGCRKVLDGVTTIEEIIRETVL"
BASE COUNT          416 a          855 c         1018 g          572 t
ORIGIN      
        1 ggcggatcag ggaaagcctc aggtgtactt gatgttggga ttgcgccctc ccaggacggt
       61 gctggcgggt tgcgccggcg ccgcggcgcg ccctccggcg gcccccaccc ccacgccgcg
      121 gttgatgagt tcccgcagct cgtcggtgtt ggaggagtac tcgaaggcct ggtcctgggt
      181 gatctccttg cggatcacca ggtcggacag gctctggttg aaggtctgca tgccgtattt
      241 ctgctggccg gactgcatga cgccgtagat ctggtggatc ttgtcctccc ggatgaggtt
      301 ccggatggcg gggttgggga tcatgatctc cagggccagg gcccgcccct tgccactggc
      361 cttgggaatg aggctctggc agatgacgcc ttccagcacc agggagagct gggcgcgaat
      421 ctggggctgc tggtggctgg ggaagacgtc gatgatgcgg ttgatggtct gcacggtgct
      481 gttcgtgtgc agggtgccga aggtgaggtg gcccgtctca gcgatggtga gggccgattc
      541 gatggtctcc aggtcgcgca gctcgcccac gagcacgacg tcgggatcct ggcgcagggc
      601 agagcgcagg gccttcttga aggagtgggt gtccgcgtgg atctcgcgct ggttcaccag
      661 ggcccggcgg tgcttgtgga cgtactccac ggggtcctcg atggtgagga tgtggaccgg
      721 ttcctccgcg ttgatcttgt ccaccatggc cgcgagggtc gtggacttgc ccgagccggt
      781 cacgccggtc acgaggacca ggccccgagg cttgtccgtc agcgcctgca cggaaggcgg
      841 caggcccagc tggtcgaagc tgcggatgtt ctcgggaatg gtgcggaaca cgcccgccgt
      901 ggcgccccgc tggttaaaga cgttggcgcg gaaccgggcc acgccctgga ggccgaagga
      961 gaagtccact tcgaggtcct cctcgaggcg gtgcttctgc tgatcggtca tcacgccata
     1021 gcagagccag cgggtctggg cggcgtccag gggaggcagc ttgaggggca ccatgcgtcc
     1081 atcgatgcgg atttggggcg ccgtctcggt ggtgatgtgg aggtccgtgc cgccatattc
     1141 caccatggtc ctgagcagct gctggagggg ggctacgtag ttggcgccga cttcactcat
     1201 gaacgacctc gcctagagaa cggtctctcg gatgatttcc tcgatggtgg tgacgccgtc
     1261 gagcaccttg cggcagccgg accggcggag ggtgatcatg ccctccttct ggccctgctc
     1321 ccgcagctcg atggcggagg cgccggtgag gatcatgtcc ttgagggtct cggacatctc
     1381 cagcacttca tagagcccca cgcgcccctt gtagccgcgc ttgttgcagg tttcgcagcc
     1441 cacgggcttg tagaaggtga tgccgcgctc cacctcctcc ggggtgaagc ccaccttgta
     1501 gagggcttcg gggggctgct ggtgggcctc cacggccttg cagttcgagc agaggcggcg
     1561 caccaggcgc tgggcgcaga tgatgttcac agaggtggcc accaggaagg gttccacgcc
     1621 catgttcatg aggcggttga tggtgctcgg cgcgtcgttg gtgtgcaggg tagagagcac
     1681 caggtggccc gtgaggctcg ccttgatggc gatctccgcg gtctcgaagt cgcggatctc
     1741 gcccaccagg atgatgttcg gatcctgccg gagaaaggag cgcagcgccg ccgcgaaatt
     1801 gaggccgatc tgttccttca tctgcacctg gttgatgccg gggaagttga attccaccgg
     1861 atcctccgcc gtcatgatgt tggtgtccac cgtgttgagc ttggcgatgg aggaatacag
     1921 ggtgttcgtc ttgcccgaac ccgtgggccc agtcaccagc accatgccgt agggcttgga
     1981 gatctgccgg tcccagcggt cgaggctctc ctgctcgaag cccagcttgg tgaggtcgag
     2041 catgagcttg tcgctgtcga gcagccggag cacgatcttt tcgccgaaga gggtcggcag
     2101 gatgctcacg cggtagtcga tgaccttctg cttgcccccc atgttgaccc gcagcttgat
     2161 gcggccgtcc tggggcaggc gccgctcggc gatgttgagc ttggccagga tcttcacgcg
     2221 ggaggtcagc ggatccttca gcttcaggtt cggccgcatg acctccatga ggatgccgtc
     2281 gatgcggaac cggatccgat aggtcttctc gtagggctcg atgtggatgt cggaggcgcc
     2341 gcgcttgatg gcgtcgatga gcaccatgtt gacgagcttc accaccggcg cgtcttcgct
     2401 gccccgcttg aggctgccca cattgacgct gtcctcgtcg tcctccgtgg cgtcgtactc
     2461 tgcgtcggcg tcgagctcct gctccaggtc cgccaggtcg aagtgctcat cctcggcatc
     2521 gaaattctgg ccggggctgg tggtggtggc tccgccgggc ccggatgtcc cgccggcgcc
     2581 ctgggtcccc cgggcgacgg ttccgtcgga caggcgcacg gcgctggcgc cgccgtagta
     2641 cttctccacc gcccgggcca ggcccatctc gctggagacc accggatcga cgttgtagcc
     2701 ggtatggaac cgcacgtcgt ccatggcgaa gatgtcggtg gggtcggaca tggccagggt
     2761 gagcacgttg cccgtccgct ggagcggcag caccttgtgc cgctgggcca ggtctttggg
     2821 aatgagggcg atgactccag ggtcgatggg gggccactgc t
//
LOCUS       DATGWW010000249         1815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_427726, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000249 DATGWW010000000
VERSION     DATGWW010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427726"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..716
                     /locus_tag="VK150_03715"
     CDS             <1..716
                     /locus_tag="VK150_03715"
                     /inference="COORDINATES: protein motif:HMM:NF015451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HLP30444.1"
                     /translation="GTRGEASGWLKGLGVPVRPWFPALAPLPLQRPRPAWEGVALRDG
                     ELRLAAGPEGRRLAAFRGDIVFTKAGVSGPAALELSQAVERARREGGAWLTYAHRLES
                     AEAVDADLQAEQRTNPRLLAVTWLQRALPERLAEPLLAEAGMARGLMLKDLPKAGRRS
                     LVALVTALPLGAPQAVPLARGEVAAGGVELAAVDPHTMLLRGWENLRVCGELLDLDGP
                     VGGYNLQAAFSTGFAAGTI"
     gene            complement(723..1733)
                     /locus_tag="VK150_03720"
     CDS             complement(723..1733)
                     /locus_tag="VK150_03720"
                     /inference="COORDINATES: protein motif:HMM:NF014818.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde 3-phosphate dehydrogenase
                     NAD-binding domain-containing protein"
                     /protein_id="HLP30445.1"
                     /translation="MDNIALNGLGRIGRLAVRRLGAPGSTQLCAVNDPAPLEQVVHLL
                     RYDSIHGQSPLAIEGETDGGQDYLILGGHRVPLFHAEDPGAVPFPPQTRLVVEASGRF
                     TQRQAAARHLKGGVTHVVISAPSPDADLTVIAPVNLADLDPARHRIVSNASCTAHATA
                     PMLKVLDDAFGLEHVGMSTVHVVTNDQRLLDLPHKDRRRARSAFQSIIPTTSSAFGAL
                     HRAMPGLPKAFDGVALRVPTLSVNLVDLVATLRRDADVAALRAAYEAAAAGPWRNLLA
                     IADPHTVSQDITGRDESVIMDLDLTMALGRRFVKVFGWHDNETGYAARLCDLVSHLAV
                     RI"
BASE COUNT          240 a          610 c          700 g          265 t
ORIGIN      
        1 ctggcacccg gggtgaggcc tcgggctggt tgaagggcct gggcgtgccg gtccggccct
       61 ggttcccggc cctggcgccg ctccccctgc agcggccccg gcccgcctgg gagggcgtgg
      121 ccctccgcga cggcgagctg cgtctcgccg cagggccgga gggccgtcgt ttggccgctt
      181 tccgcggcga catcgtcttc acgaaggccg gcgtcagcgg acccgcggcg ctggagctga
      241 gccaggccgt ggagcgggcc cgccgtgagg gcggcgcctg gctcacctac gcccaccgac
      301 tggagtcggc cgaggccgtg gacgccgatt tgcaagccga gcagcggacc aacccgcggc
      361 tgctggccgt cacctggctg cagcgggcct tgcccgagcg gctggcggaa cccctcctgg
      421 ccgaggcagg gatggcccgg gggctcatgc tcaaggacct gcccaaggct ggccgccgga
      481 gcctcgtggc cctggtcacg gctttgcccc tcggcgcgcc ccaggccgtg cccctggccc
      541 ggggcgaagt ggccgccggc ggcgtggaac tcgcggctgt ggaccctcac acgatgctgc
      601 ttcgcggctg ggagaacctg cgggtctgcg gcgaactgct ggacctcgac ggccccgtgg
      661 gcggctacaa cctgcaggcg gccttcagca ccggcttcgc ggcgggaacg atctagggtc
      721 gcctagatcc ggaccgcgag gtggctcacc agatcgcaga gccgggcggc gtagcccgtc
      781 tcgttgtcat gccagccgaa gaccttcacg aagcgccggc ccaaggccat ggtcaagtcg
      841 aggtccatga tcacgctctc atcccggccg gtgatgtcct ggctgaccgt gtgcggatcg
      901 gcgatggcga ggaggttccg ccaggggccc gccgccgccg cctcgtaggc tgcgcgcagc
      961 gcggccacat ccgcgtcccg gcgcagggtg gcgaccaggt ccacgaggtt cacgctgagg
     1021 gtgggcaccc ggagggccac gccgtcgaaa gccttgggca ggccgggcat ggccctgtgc
     1081 agcgcaccga aggcgctgga ggtcgtgggg atgatgctct ggaaggcgga ccgggcccgg
     1141 cgtcggtcct tgtggggaag gtccagcagc cgctggtcgt tggtaaccac gtgcaccgtg
     1201 ctcatgccca cgtgctcaag gccgaaggcg tcgtccagca ccttcagcat gggggccgtg
     1261 gcgtgggcgg tgcagctcgc gttcgacacg atccggtggc gggcagggtc caggtcggcg
     1321 aggttcaccg gcgcgatcac ggtgaggtcg gcgtcagggc tgggcgcgct gatgaccaca
     1381 tgggtgacac cgcccttcag gtgacgcgcg gcggcctgcc gctgggtgaa gcgcccactt
     1441 gcctccacca cgaggcgggt ttggggaggg aaggggaccg cgccgggatc ctcggcatgg
     1501 aagaggggca cgcggtgccc gccgaggatg aggtagtcct gccctccgtc cgtctcgcct
     1561 tcgatggcta gagggctctg gccatggatg gagtcgtacc gcaggaggtg gaccacctgc
     1621 tccagggggg cggggtcgtt gaccgcgcag agctgggtgg agccgggggc gccgagccgg
     1681 cgcacggcca gccttccgat gcggccgagg ccgttgaggg cgatgttgtc catgggctag
     1741 atccgctcca gcacgtggac gcagaggtcc ttcagccggg cggcgtaccc gaactcgttg
     1801 tcgtaccagc cgaag
//
LOCUS       DATGWW010000250         1580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_427762, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000250 DATGWW010000000
VERSION     DATGWW010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427762"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1388)
                     /locus_tag="VK150_03725"
     CDS             complement(<1..1388)
                     /locus_tag="VK150_03725"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLP30446.1"
                     /translation="MKDFTHLAQEVLQKAQEIKLSGHHLELTSLHLAAGLMRAAYDFL
                     EPSLADAGVSAIAFAEDLESAVARLPKAQDGSTEDQAAPDLHRVLRSAKQISLDMGDT
                     VVTAEHLLLSVAGKAEMFDLKSVVAKHKLEFNRLKEAIMKNRNHGGGEAPGAHGENAE
                     NEYNVLEKYGQELVALAREGKLDPVIGREEEIRRVVRILSRKTKNNPVLVGEPGVGKT
                     AIVEGLAQRIVKGDVPESLKGKKVYSLDLGSLIAGAKYRGEFEERLKAVLKELEKDQG
                     DTLLFIDEIHTIVGAGKAEGSMDVGNMLKPKLARGELHCIGATTLKEYKQNIEKDAAL
                     ERRFQPVMVLEPSVDEAVSILRGIKERFDRHHGVRIQDNAIVAATKLSARYIADRFLP
                     DKAIDLMDEAAAMVKTQLDTMPEELDTLSRRLLQLQIEERALRQEKDEKSRERLEALT
                     SEIVSLKEQVDS"
BASE COUNT          230 a          502 c          521 g          327 t
ORIGIN      
        1 atggagtcca cctgctcctt gagggagacg atctcggacg tgagggcctc caggcgctcc
       61 cggctcttct cgtccttctc ctggcgcagg gcccgctcct ctatctggag ctgcagcagc
      121 cggcgcgaaa gggtgtcgag ctcctcgggc atggtgtcga gctgggtctt caccatggcg
      181 gcggcctcgt ccatgaggtc gatggccttg tccggaagga agcggtcggc gatgtaccgg
      241 gccgagagct tggtggccgc cacgatggcg ttgtcctgga tgcgcacgcc gtgatgccgg
      301 tcgaagcgct ccttgatccc gcgcaggatg gacacagcct cgtccaccga gggttcgagg
      361 accatgacgg gctggaagcg ccgctcgagg gccgcgtcct tctcgatgtt ctgcttgtac
      421 tccttgaggg tggtggcgcc gatacagtgc agctcgccgc gggccagctt gggcttgagc
      481 atgttgccca cgtccatgga gccttcggcc ttgccggccc cgacgatggt gtggatctcg
      541 tcgatgaaga ggagggtgtc tccttggtcc ttctccagct ccttgagcac ggccttgagg
      601 cgttcctcga actcgccgcg gtatttggcc ccggcgatta ggctcccgag atcgaggctg
      661 tagaccttct tgcccttgag gctctcgggc acgtcgccct tcacgatgcg ctgggccaga
      721 ccctccacga tggcggtctt gcccacgccg ggctccccca ccaggacggg gttgttcttg
      781 gttttgcgcg agaggatgcg caccacgcgg cggatttcct cctcgcggcc gatcaccggg
      841 tcgagcttcc cctcccgggc cagggccacc agctcctggc cgtacttctc gagcacgttg
      901 tactcgttct cggcgttctc cccgtgggct ccgggggctt cccctccgcc atggttccgg
      961 ttcttcatga tggcttcctt caatcggttg aattccagct tatgcttcgc taccacgctc
     1021 ttgagatcga acatttccgc cttgcccgcc acggagagga ggagatgctc ggcggtcacc
     1081 acggtatcgc ccatgtcgag tgagatctgt ttcgcgcttc gcagcacccg gtgcaggtcc
     1141 ggggccgcct gatcctcggt ggatccatcc tgggccttgg ggagccgggc cacggcggac
     1201 tcgagatcct ccgcgaaggc gatggcgctc actccggcat ccgcgaggga gggctcgagg
     1261 aaatcgtagg cggcccgcat caggccggcc gcgaggtgga gggaggtgag ctccaagtgg
     1321 tgcccggaga gcttgatctc ctgggctttc tggaggactt cctgggcgag atgggtgaag
     1381 tctttcatac gcaccccgct ggaaaagcaa actcgatgcc cggacccgcg gactttcgga
     1441 caatgccgga aaggggctct ggatcaagat aaaatccatc cggcgaggat gccccagggt
     1501 ccggtgccgc gggcggccca ttcccgtttc agatcccgtt ccagggtgga acgggatgtt
     1561 gccgatacgg cttatacggc
//
LOCUS       DATGWW010000251         1669 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_65858, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000251 DATGWW010000000
VERSION     DATGWW010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1669
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65858"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VK150_03730"
     CDS             <1..219
                     /locus_tag="VK150_03730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30447.1"
                     /translation="AFVLQKEKQEAERKRIEAEGQARAQQIVSQSLTPQIIEYQRIQA
                     LRDIGAKGNLIITPMGGATPMIQVPAKK"
     gene            complement(221..1393)
                     /locus_tag="VK150_03735"
     CDS             complement(221..1393)
                     /locus_tag="VK150_03735"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HLP30448.1"
                     /translation="MIRAALTLLLALPLAAQTTPKPGGPPTEDSTIERFRARSQPRVP
                     APEPKLSAEELNTIRRFRQAKPSVVYVSAILKVQDPKTLDTTKVPAGAGTGFVWDEWG
                     HIVTNHHVISVEQGGKLFADVEEVEITLSNGKSYKGRVIGTSFAYDIAVIQAFAPLDS
                     MPPIPIGRSSALKVGQSVMAIGNPFGLDHSLSKGVISALGREIATGYNTWILNSIQTD
                     AAINPGNSGGPLLDSSGRLIGMNTSIVATKGEGSVGVGFALPVDTLNDVVPRLIARGR
                     LEPPRMGFEVFPTGQALHYFGVTRGLVVKGVDADSPASRAGLRPVELDEAGHLRAMGD
                     ILLGYQGRAIESEGQFMAMLEVEPPKDIIELDVLRDGKVIKVTLSLRKPKALPTSI"
BASE COUNT          262 a          515 c          616 g          276 t
ORIGIN      
        1 gccttcgtgc tgcagaagga gaagcaggag gccgagcgca agcggatcga ggccgagggc
       61 caggcccggg cccagcagat cgtcagccag agcctgacgc cccagatcat cgagtaccag
      121 cgcatccagg ccctgcggga catcggcgcc aagggcaacc tgatcatcac ccccatgggc
      181 ggcgccacgc ccatgatcca ggtgcccgct aagaagtagg tcagatgctg gtgggcaggg
      241 ccttgggttt cctgaggctc agcgtcacct tgatcacctt gccgtcgcgc aggacatcca
      301 gttcgatgat gtctttcggg ggctccacct ccagcatggc catgaactgg ccttcgcttt
      361 cgatggcccg gccctggtag cccagaagga tgtcgcccat ggcgcgcagg tgcccggcct
      421 cgtccagctc gacggggcgc agcccggccc gggaggccgg ggagtcggcg tcaaccccct
      481 tgaccacgag gccgcgggtc acgccgaagt agtgcagggc ctggccggtg gggaacacct
      541 cgaagcccat gcggggcggc tccaggcgtc cccgggcgat gaggcgcggc accacatcgt
      601 tgagggtgtc cacgggaagg gcgaagccca cgcccacgga tccctcgccc ttggtggcga
      661 cgatggaggt gttcatgccg atgaggcggc cgctgctgtc gaggaggggg ccgcccgagt
      721 taccggggtt gatcgcggca tccgtctgga tggagttcag gatccaggtg ttgtacccgg
      781 tggcgatctc gcggccgagg gcggagatca cgcccttgct gagggaatgg tccaggccga
      841 agggattgcc gatggccatg accgactggc cgaccttcag ggctgaactg cgcccgatgg
      901 ggatgggcgg catcgagtcg aggggtgcga aggcttgaat gacggcgatg tcataggcga
      961 agctggtgcc gatgacacgg cccttgtagg actttccgtt ggagagggtg atctccacct
     1021 cctccacgtc ggcgaagagc ttgccgccct gctccacgct gatgacgtga tggttggtga
     1081 cgatgtggcc ccactcgtcc cagacgaatc ccgtgccggc accggcggga accttggtgg
     1141 tgtcgagggt cttggggtcc tgcactttga ggatggcgga cacgtagacg acgctcggct
     1201 tcgcctgcct gaagcggcgg atggtgttga gctcctcggc gctcagcttc ggctcggggg
     1261 ccgggacgcg cggctgtgag cgggcccgga agcgttcgat ggtgctgtcc tcggtgggcg
     1321 gccctccggg ctttggagtg gtctgggcgg ccaggggcag ggccagcagg agggtcagag
     1381 cggcacggat catggaggct cccggaccga ttatgggtca gggcgggaag ggggttcacc
     1441 ggaaacccgg gagttggggt actttgagca acatcccgat tgccccagaa agactccgcg
     1501 atgccggctt ccccgaacgg acccctcccc cgccgccctc cccatgcggt cgcgtgggcg
     1561 ctcctgatcc tgctggtctc cggctcaggg accgcctggc tggttcggcg caggggattc
     1621 ggccagccgg tccaggtgct ctgcgtcgag accgaggggg cgacgggcg
//
LOCUS       DATGWW010000252         3617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_428029, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000252 DATGWW010000000
VERSION     DATGWW010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3617
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428029"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..295
                     /locus_tag="VK150_03740"
     CDS             <1..295
                     /locus_tag="VK150_03740"
                     /inference="COORDINATES: protein motif:HMM:NF013591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HLP30449.1"
                     /translation="KWGLISEIPPRYRSPYFNHIMGGYAAGYYSYIWSAVLDSDAFQA
                     FKEKGNLFDPATAAKFRAEVLSKGGTEDPALLYHRFRGRDPKVGPLLEKRGLK"
     gene            complement(352..2427)
                     /locus_tag="VK150_03745"
     CDS             complement(352..2427)
                     /locus_tag="VK150_03745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30450.1"
                     /translation="MFTIVFEAKASASDGTSASSKVEVQFAPGAEWQGHFGFNMGKGS
                     GRGDERTPGKLYKLRGGLAGLRPAEPMCFGILSHKGKAAAGGRTIHGPGSNQQDPSGV
                     GWTLREDAARFIRTEEGGILHCCPVVYMDEEPPEFGLMTQGGYDFDEATTAAWERLQT
                     FHFTNEELRNLRKVRKVNAASLTSKDGTVQQSFVCTLTGEPPDDEVEATVTLEDYDGW
                     IPRGNLEQPDQPGDLPLQVTIKIHKKGEPGVPRQAKLEVALPRVSMNRGVCGNWPLNA
                     SPSEGLRFRQKDFPQKEGLIWQDRTHLASDILLEEAMFRVHAHDFGAWGSLRVTATDD
                     LDRPVKVTIQGKERPELNLPKDENANHIADAWETRWAGGLRGAGEDEDAQPQGDGCTG
                     DVLTRYEEYRGFRMSGSEGGYAAASPTEMTTGRHVRTDPRVKDVFICDQLGYGLGFFR
                     QSGLCVHLVTAEECGVTEKGAFNRHTINPNRDEQSKDEQYVLWLMPGAGTLEGDDEGG
                     ANMKPGWGAPGPPRDCEGVYVNLPALQGGADFDLAKKVKNTLTHELAHGCRVKHHGER
                     KIRVVKVEYLAAFKAKPKGTVETGSWDLGPLPMGKTGASFSSGDTHCYMTYRLNFIET
                     AAAPPFALWDEAGARHTGLFYDCGPTDCVQTQFCDDPSTWRIGPAGPPDEGRGRCLRQ
                     FCVNHLKHP"
     gene            complement(2553..3401)
                     /locus_tag="VK150_03750"
     CDS             complement(2553..3401)
                     /locus_tag="VK150_03750"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HLP30451.1"
                     /translation="MSRAAHAFSTVFVMAFANLLAALPALAQADKAGCKDHPLFPTRM
                     PGYVLQDCKTEAFGRYEFWTSNAREKVPVEGKFTFLTYAVTDRKLEPSAVAVVRNYEN
                     AILKAGGKVLHQRPDWWVNGKITKDGKEAWVQAERGNGKIWLRIVEKQAMAQHIQADA
                     AALGGDLAATGHVAVYGIYFDTGKAEVKPESGPALAEIAKLLGATPVLKLKVVGHTDM
                     TGGLEANLKLSQARAEAVVQALVGQHGIAASRLKGHGVGPLAPVASNDTEEGKAKNRR
                     VELVKE"
     gene            complement(3423..>3617)
                     /locus_tag="VK150_03755"
     CDS             complement(3423..>3617)
                     /locus_tag="VK150_03755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30452.1"
                     /translation="RCPWGGVADNRVEPPPIPMVRLVGVAHTASSRITLKIEGDMSAE
                     AALAAAKETFENLAKYPFKP"
BASE COUNT          492 a         1238 c         1244 g          643 t
ORIGIN      
        1 caagtggggg ctgatctccg agattccgcc ccgctaccgc agcccctact tcaaccacat
       61 catgggcggc tacgcggcgg gctactacag ctacatctgg agcgccgtgc tggacagcga
      121 cgccttccag gccttcaagg agaagggcaa cctcttcgat cccgccaccg ccgcgaaatt
      181 ccgcgccgag gtgctctcca agggcggcac ggaagatccc gcgctgctct accatcgctt
      241 ccgcggccgc gatcccaagg tggggccgct gctggagaag cgcggactga agtagacctc
      301 gttcaggttc tccagggagc cggcggccgg gcctgagcct gccgccggcg atcaggggtg
      361 cttgaggtgg ttgacgcaga actggcgcag gcagcggccg cgcccctcgt cggggggacc
      421 cgcgggcccg atgcgccagg tggagggatc gtcgcagaac tgcgtctgaa cgcagtccgt
      481 ggggccgcaa tcgtagaaga ggcccgtgtg ccgcgcgccg gcctcgtccc acaaggcgaa
      541 gggcggcgcc gcggcggtct cgatgaagtt gagccggtag gtcatgtagc agtgggtgtc
      601 cccgctgctg aagctggcgc cggtcttacc catcggcagc gggccgaggt cccaggatcc
      661 cgtctcgacc gtgcccttgg gcttggcctt gaaggccgcc aggtactcga ccttgaccac
      721 gcggatcttc cgctcgccgt gatgcttcac ccggcagcca tgggccagct cgtgggtgag
      781 ggtgttcttc accttcttcg cgaggtcgaa atccgcgcct ccctgcaggg ccggcaggtt
      841 cacgtacacc ccttcgcagt cccggggcgg acctggagct ccccagcccg gtttcatgtt
      901 cgcgccgccc tcgtcatcgc cctccagcgt gccggcgccc ggcatgagcc agagcacgta
      961 ctgctcatcc ttcgactgct cgtcgcggtt ggggttgatg gtgtggcggt tgaaggcgcc
     1021 cttttcggtg acgccgcact cctcggccgt gacgaggtgc acgcacagcc cggactggcg
     1081 gaagaacccg agcccgtagc ccagctggtc gcagatgaac acgtccttga cgcggggatc
     1141 ggtccgcacg tggcgccccg tggtcatctc cgtgggcgat gccgcggcgt accccccctc
     1201 gctgccgctc atgcggaagc cgcggtactc ctcgtagcgc gtgagcacat cgccggtgca
     1261 gccgtcgcct tggggctgcg cgtcctcgtc ctcgccggcg ccccggaggc cgccggccca
     1321 gcgggtctcc caggcatcgg cgatgtggtt ggcgttctcg tccttcggca ggttcagctc
     1381 gggccgttcc ttgccctgga ttgtcacctt cacggggcga tccaggtcgt ccgtggcggt
     1441 cacccgcagc gatccccacg ccccgaagtc gtgggcatgg acccggaaca tcgcctcctc
     1501 cagcagaatg tcggaggcca ggtgggtgcg gtcctgccag atcagcccct ccttctgcgg
     1561 gaaatccttc tgccggaacc gcaagccttc cgagggcgag gcgttcaggg gccagttccc
     1621 gcagacgccg cggttcatgg agacgcgggg cagggcgacc tcgagcttgg cctggcgggg
     1681 cacgccgggc tcccccttct tgtggatctt gatggtgacc tggaggggga ggtccccagg
     1741 ctggtcgggc tgctccaggt tccccctcgg aatccagccg tcgtagtcct ccagggtcac
     1801 tgtggcttcc acttcgtcgt cgggcggctc tccggtgagg gtgcacacga aggactgctg
     1861 gaccgtgccg tccttggacg tcaggctggc cgcgttcacc ttccggacct tcctgaggtt
     1921 ccgaagttcc tcattggtga aatggaaggt ctgcagccgt tcccaggcgg cggtggtggc
     1981 ctcgtcgaag tcgtagcccc cctgcgtcat caggccgaac tcggggggct cctcgtccat
     2041 gtagacgacc gggcagcagt gcaggatgcc gccctcctcg gtgcggatga accgggcggc
     2101 atcctcgcgc agggtccatc cgacgccgga tggatcctgc tgattgctcc ccgggccgtg
     2161 gatggtccgt ccgcctgcgg cggctttgcc cttgtggctc aggatgccga agcacatggg
     2221 ctcggcgggc cgcaggcccg cgagtccgcc gcgcagcttg tagagcttgc ccggcgtccg
     2281 ctcgtcgccc cggcccgaac ctttgcccat gttgaagccg aagtgcccct gccactcggc
     2341 gccgggcgcg aactgcacct cgaccttgct ggaggccgaa gtgccgtcgc tggcgctggc
     2401 cttcgcctcg aagacgatgg tgaacacctg aggcggcctg ggcgcttcct gaccacgcat
     2461 gggaagcggc cctgtcgcca ggagcagaag gccgagcgtc cgcgtcaacc accggcccag
     2521 aacgcccatg tcccctccag tcacgatccg cgctattcct tgaccagctc tacccgccgg
     2581 ttcttggcct tgccctcttc ggtgtcgttg ctggccacgg gggccagggg acccacgccg
     2641 tggcccttca ggcgggaggc ggcgatgccg tgctggccga cgagggcctg caccacggcc
     2701 tcggcgcggg cctgggagag cttcaggttg gcctccaggc cgccggtcat gtcggtgtgg
     2761 ccgaccacct tcagcttcag gacaggcgtg gcgccaagca gcttggcgat ctccgccagg
     2821 gcgggcccgg attcgggctt cacctcggcc ttgccggtgt cgaagtagat gccgtagacc
     2881 gccacgtggc cggtggcggc gaggtcgcct cccagggccg ccgcatcggc ctggatgtgc
     2941 tgggccatgg cctgcttctc gacgatgcgc agccagatct tgccgttccc gcgctccgcc
     3001 tgcacccagg cctccttgcc gtccttggtg atcttgccgt tcacccacca gtccggccgc
     3061 tggtggagca ccttgccgcc ggccttcagg atggcgttct cgtagttccg caccacggcc
     3121 acggcggagg gctcgagctt ccgatccgtg acggcgtagg tcaggaacgt gaacttccct
     3181 tccacgggca ccttctcccg cgcgttggaa gtccagaact cgtagcggcc gaatgcctcg
     3241 gtcttgcagt cctggaggac gtagccgggc atgcgggtgg ggaagagggg gtgatctttg
     3301 catccggcct tgtcggcctg ggccagggcc ggcagcgcgg cgaggaggtt ggcgaaggcc
     3361 atgacgaaga ccgtggagaa ggcatgggcg gctcggctca cgggagatcc tttcgggaag
     3421 ggtcagggct tgaacgggta cttggccagg ttttcgaagg tctccttcgc ggcggcgagg
     3481 gccgcctccg cgctcatgtc gccttcgatc ttcagggtga tgcgcgagct cgctgtgtgg
     3541 gccaccccca cgaggcgcac catgggaatg gggggcggct cgacgcggtt gtcggccacg
     3601 ccgccccagg ggcaccg
//
LOCUS       DATGWW010000253         1556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_245437, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000253 DATGWW010000000
VERSION     DATGWW010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245437"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..859)
                     /locus_tag="VK150_03760"
     CDS             complement(<1..859)
                     /locus_tag="VK150_03760"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HLP30453.1"
                     /translation="MNAYVLSQAPLILGFVFLLALASVRPSGRENLSNIIAILALASG
                     AIAVWKFLPPGDQFFGGAIRVTAAGKILAYICLGLTAVGLLLTEDYLDKVRIQGVDWR
                     MVVLALAIGMVNLCLAGDLATLFIAYELVSIPSYVLAGFSHKDPRSNEAGMKYLLLGA
                     FSSVLFLLGLAFVYGATGEIHLAAIQDKLSRAVEAGANGDLVLAKLGLAFLLGAIFFK
                     VAVAPLHSWLPDVYQGTNLASLAIISSPVKVAVFGMLGMLLWGAFEPLADTWRPVLLA
                     GAGISAVMGN"
     gene            complement(856..>1556)
                     /locus_tag="VK150_03765"
     CDS             complement(856..>1556)
                     /locus_tag="VK150_03765"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HLP30454.1"
                     /translation="EECLRFAPQLQVLCVMGALYGALLCLAQDRLIDILVYSSLSHLS
                     LVALGAFTAAGETYSTALSGAIFQVFNHGLIMAALFAFDARIATGGESPLLSATGGLR
                     AGQRRLAAVLLTAIFASASLPGMSNFAGEILVLFAAFRSSPWLTFIASVGALIGAAAL
                     VRAFHQAFLGKRKNTEIAGFAQAGDLSVGETGLALALIALWIGLGLYPSLFLHPVEST
                     LLSPGAVRGMAFLP"
BASE COUNT          312 a          475 c          581 g          188 t
ORIGIN      
        1 ggttgcccat caccgccgag atgcccgcgc cggccagcag cacgggccgc caggtgtcgg
       61 ccaggggctc gaaggcgccc cacagcagca tccccagcat gccgaatacg gccaccttca
      121 ccggcgagga gatgatggcc agggaggcga ggttggtccc ctggtacacg tcgggcagcc
      181 acgagtgcag gggggcgacc gcgaccttga agaagatggc gcccaaaagg aaggccagcc
      241 cgagcttggc caggaccagg tcgccgttcg cgcccgcctc caccgcgcgg gagagcttgt
      301 cctggatggc cgcgagatgg atttcgccgg tggccccgta cacgaaggcg aggccgagca
      361 ggaagagcac gctggaaaac gcgccgagca ggaggtattt catgcccgcc tcgttggagc
      421 ggggatcctt gtggctgaag cccgccagca catacgaagg gatggagacg agttcgtacg
      481 cgataaacaa ggtcgccagg tcgccggcca ggcacaggtt gaccatgccg atggccaggg
      541 ccaggaccac catgcgccag tccacgccct ggatgcgcac cttgtccagg taatcctcgg
      601 tgagcagcag ccccacggcg gtcagcccca ggcagatgta agccaggatc ttgcctgcgg
      661 cggtcacccg tatggcgccg ccgaagaatt gatcgccggg aggcaggaat ttccacaccg
      721 cgatggcgcc cgaggccagg gccaggatgg cgatgatgtt ggagaggttt tcgcgcccgg
      781 aggggcgcac cgaggccagc gccagcagga acacgaagcc caggatgagg ggcgcttgcg
      841 aaagaacgta tgcattcatg ggaggaacgc catgccgcgg acggcgccgg ggctcaagag
      901 ggtgctttcc accgggtgga ggaagagcga gggatagagg ccgagaccga tccagagggc
      961 gatcagggcc agggccaggc cggtttcgcc gaccgagaga tcgcccgcct gggcgaaccc
     1021 ggcgatttcc gtgttcttgc gcttgcccag gaaggcctgg tggaaggcgc gcaccagggc
     1081 cgccgcgccg atcagggcgc cgaccgaagc gatgaaggtg agccaggggg aggaacggaa
     1141 ggcggcgaac aggaccagga tttcgcccgc gaaattgctc atgccgggca ggctggccga
     1201 ggcgaagatg gcggtcagga gcacggcggc caggcggcgc tggcccgcgc gcaggccccc
     1261 ggtggccgag agcagggggc tttccccgcc cgtggcgatg cgggcgtcga aggcgaagag
     1321 cgcggccatg atgagaccgt ggttgaagac ctggaagatg gcgccggaaa gggcggtgga
     1381 ataggtctcc cccgccgccg tgaaggcccc cagggccacc aggctcaggt gcgacaggga
     1441 ggagtagacc aggatatcga tgagccgatc ctgcgccagg cagagcaggg cgccgtaaag
     1501 ggcgcccatc acgcacagca cctgcaattg gggcgcgaag cgcaggcatt cctcgg
//
LOCUS       DATGWW010000254         1960 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_66157, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000254 DATGWW010000000
VERSION     DATGWW010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66157"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(118..194)
                     /locus_tag="VK150_03770"
     tRNA            complement(118..194)
                     /locus_tag="VK150_03770"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(158..160),aa:Lys,seq:ctt)
     gene            complement(255..1247)
                     /gene="trpS"
                     /locus_tag="VK150_03775"
     CDS             complement(255..1247)
                     /gene="trpS"
                     /locus_tag="VK150_03775"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HLP30455.1"
                     /translation="MQSRVLSGIQPSGSQHIGHLVGALDNFTRLQGQGETFYMIADWH
                     ALTSKYESVEEIWPATLELTATYLAAGLDPNQATIFVQSLVKEHAELHLLLSMVTPLS
                     WLERVPTYKEKLQNAVADLGSYGFLGYPLLQTADIIVYKAHKVPVGEDQLFHLELARE
                     VVRRFNFLYQREVFPEPEAVLTKTPKVPGLDGRKMSKSYGNCIYLRDSNAVILEKCTR
                     QMASDPARVRKTDPGNPDICPVFEFHKLFSDADTIDLVNTECRRAGIGCFDCKKRVAE
                     AMTRRIEPVRERIEANLAQPGRIQEVLRTGSDRARAVAAETMADVRSAMKMPAL"
     gene            complement(1251..>1960)
                     /locus_tag="VK150_03780"
     CDS             complement(1251..>1960)
                     /locus_tag="VK150_03780"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HLP30456.1"
                     /translation="VALLFSLSVHEASHASAAFLLGDDTAARQGRMSLNPVAHMDPLG
                     TVVFPLLGLIFGGFFIGWAKPVPFDPVNFTRKIRIKTGGAIVSAAGPASNIVLSFIFL
                     AVMCLSIRASVPGTVDRWLLLQAAFRGPETLIQLGLPMGQVLLLGLGGALVYMNVLLA
                     AFNLLPLGPLDGAGVLRGVLPDRWLPRYDHLRYHPYTMPILFLLMLTGVIGFFLTPVR
                     ALLSWSLNPVARLILGV"
BASE COUNT          354 a          588 c          708 g          310 t
ORIGIN      
        1 ggggggcctt tcaaatatag ccccgctctc ccctcttgac gcgaggcagt tgggcagttg
       61 tgacgcgagg acagaccacg aaaaagcccg cagacgttag gtctgcgggc ttcagggtgg
      121 tggtccctcc cggactcgaa ccggggaccc tctgattaag agtcagatgc tctaaccagc
      181 tgagctaagg gaccacgaga agaaaagtct accagggacc ggccggaacg caagagcccg
      241 ttccagaccg ggtctcagag cgccggcatc ttcatggccg agcgcacgtc ggccatggtt
      301 tcggccgcca cggcccgcgc ccggtcgctg ccggtgcgaa gcacctcctg gatccgccca
      361 ggctgggcga ggttggcttc gatgcgctcc cgcacgggtt cgatccggcg ggtcatggcc
      421 tcggccacgc gtttcttgca gtcgaaacag ccaatgcccg cccggcggca ctcggtgttc
      481 accaggtcga tggtgtcggc gtcgctgaag agcttgtgga actcgaacac ggggcagatg
      541 tcggggttgc cgggatcggt cttgcggacc cgggcggggt cggaggccat ctgccgggtg
      601 cacttttcga ggatgacggc gttgctgtcg cgcaggtaga tgcagttccc gtagctcttc
      661 gacatcttcc gaccatcgag gccgggcacc ttgggcgtct tcgtcagcac ggcctcgggc
      721 tcggggaaca cctcccgctg gtagaggaag ttgaagcgcc gcaccacctc ccgggccagc
      781 tccaggtgga agagctgatc ctcgcccacg ggcaccttgt gggccttgta gacgatgatg
      841 tcggccgtct ggagcagcgg gtagccgagg aagccgtagc tgccaaggtc agccacggcg
      901 ttctgcagct tctccttgta cgtgggcacc cgttccagcc aggagagcgg cgtgaccatg
      961 gagagcagca ggtgcagttc ggcgtgctcc ttcaccaggc tctgcacgaa gatggtggcc
     1021 tggttggggt cgagccccgc ggccaggtag gtcgccgtga gctccagcgt ggcgggccag
     1081 atctcctcga cggattcgta cttcgaggtc agcgcgtgcc agtccgcgat catgtagaag
     1141 gtctcgccct ggccctgcag gcgggtgaag ttgtccagcg ccccgaccag gtggccgatg
     1201 tgctgggagc ccgagggctg gatgccggag agaacgcggg actgcatgga tcagactccg
     1261 aggatgaggc gggcgacggg gttcagcgac caggagagaa gcgcccggac gggagtgagg
     1321 aagaagccga tgacgccggt cagcatgagc aggaagagga tgggcatcgt ataggggtgg
     1381 tagcgcaggt ggtcgtagcg cgggagccac cggtcgggca gcacgccccg cagcacaccg
     1441 gcgccgtcga ggggaccgag gggcagcagg ttgaaggctg ccaagaggac gttcatgtag
     1501 accagcgctc cgcccagccc gagcagcagc acctggccca tgggcagccc cagctggatg
     1561 agggtttccg gcccgcggaa ggcggcctgc agcagcagcc atcggtccac ggtgccaggc
     1621 acgctggccc ggatggagag gcacatgacc gccaggaaga tgaagctgag cacgatgttg
     1681 gacgcagggc ccgcggccga gacgatggct ccgccggtct tgatcctgat cttgcgggtg
     1741 aagttcacgg ggtcgaaggg gactggtttc gcccagccga tgaagaaccc gccgaagatg
     1801 agccccagca gggggaacac cacggtgccc aggggatcca tgtgcgcgac gggattcagg
     1861 ctcatgcggc cttgccgggc ggccgtgtca tcccccagca ggaaagccgc ggaggcatgg
     1921 ctggcttcgt gaacgctgag gctgaagagc agggccacat
//
LOCUS       DATGWW010000255         1579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_145533, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000255 DATGWW010000000
VERSION     DATGWW010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145533"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..590)
                     /gene="mutL"
                     /locus_tag="VK150_03785"
     CDS             complement(<1..590)
                     /gene="mutL"
                     /locus_tag="VK150_03785"
                     /inference="COORDINATES: protein motif:HMM:TIGR00585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HLP30457.1"
                     /translation="MSRIRILPDQVANQIAAGEVVERPSSVLKELVENALDAGARRIE
                     VAWEEGGKRLLEVADDGSGMARDDLYLALERHATSKVRTAEDLGHLGTFGFRGEALPS
                     IASVSRFDLASAETEGAGHRLRCEFGVIKEVAPASRSRGTTVTVRDLFAQLPARRRFL
                     KATETEHAHLWGVVTRMALATPEVHWVVESDRSGRLV"
     gene            661..>1579
                     /locus_tag="VK150_03790"
     CDS             661..>1579
                     /locus_tag="VK150_03790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30458.1"
                     /translation="MDRRSFPACLALLPILAGMPALAGPRAQPRQQAPDAAWLTFTTA
                     HYRIHCPKAFEAFGRDVAGRVEGVHAQYLGLVGYVHDQPMDIVILDPVMEANGMAFPI
                     LPRPHVVLWKTEPEADSAIGHHRGWAELLVVHELGHMHHLLRPARKQNLLQRWMAVVG
                     PLTEKSPRWIIEGYATLIEGKLTGSGRPHSAIRAAVLRQWALEGKLPTYEALSGTEGF
                     LGGSMAYLGGSAYLAWLESRSGDPKALPTLWTRLAGKRDFDAAFQATFGFGPKDGYQR
                     FCAELTHTALELERRAKAEGLREGELVTQL"
BASE COUNT          233 a          592 c          536 g          218 t
ORIGIN      
        1 acgaggcgcc cgctccggtc cgattccacc acccagtgca cctcgggggt ggccagggcc
       61 atgcgggtga ccacgcccca caggtgggcg tgctcggttt ccgtggcctt gaggaagcgc
      121 cggcgcgccg gcagctgggc gaagagatcc cgcacggtca cggtggtgcc gcggctccgc
      181 gaggcgggcg ccacctcctt gatgacgccg aactcgcagc gcaggcggtg accagcgcct
      241 tcggtctcgg cgctggcgag gtcgaagcgg ctcacgctgg cgatgctcgg cagggcctcc
      301 ccgcggaacc cgaaggtgcc caagtggccc aggtcctccg ccgtgcgcac cttgctggtg
      361 gcgtggcgct ccaaggccag gtacaggtca tcccgggcca tgccggagcc atcgtcggcc
      421 acctccagca gacgcttgcc gccctcttcc caggccacct cgatgcggcg ggccccggca
      481 tccagggcgt tctccaccag ctctttcagc acggaggagg ggcgctccac cacctccccg
      541 gcggcgatct ggttggccac ctggtcgggc aggatcctga tgcgggacat gggtaagacg
      601 ctatcacccc tggcggggaa gcaggcatcg gatcgcggcc ggtccgggca cactggagcc
      661 atggaccgcc gatctttccc cgcctgcctc gccctcctgc cgatcctggc ggggatgccc
      721 gccttggcgg ggccccgggc ccagccccgc caacaggcgc ccgacgcggc ctggctcacc
      781 ttcaccacgg cccactaccg catccactgc ccgaaggcct tcgaggcctt cggacgggac
      841 gtggcgggcc gggtggaggg cgtccacgcc cagtacctgg gcctggtggg ctacgtgcac
      901 gaccagccca tggacatcgt gatcctcgat ccggtgatgg aggccaacgg catggccttc
      961 cccatcctgc ccaggcccca cgtggtgctc tggaagaccg agccggaagc ggattccgcc
     1021 atcggtcacc atcgcggctg ggcggaactg ctggtcgtcc acgagctggg ccacatgcac
     1081 cacctgctgc gcccggcccg gaagcagaac ctcctgcagc ggtggatggc ggtggtgggg
     1141 cccctcacgg agaaatcccc ccgctggatc atcgagggct acgccacgct catcgaaggc
     1201 aagctcacgg gcagcggccg tccccacagc gccatccgcg cggcggtgct gcgccagtgg
     1261 gccctcgaag gcaagctgcc cacctacgag gccctcagcg gcaccgaggg ctttctcggc
     1321 ggcagcatgg cctacctggg cggcagcgcc tacctcgcct ggctggagag ccggagcggg
     1381 gatcccaagg ccctgccgac cctctggacc cgcctcgccg gcaagcgcga cttcgacgcc
     1441 gccttccagg ccaccttcgg cttcgggccc aaggacggct accagcgctt ctgcgccgag
     1501 ctcacccaca cggccctgga gctggagcgc cgggcgaaag cggaaggact ccgggagggc
     1561 gagctcgtca cccagctga
//
LOCUS       DATGWW010000256         1980 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_66210, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000256 DATGWW010000000
VERSION     DATGWW010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66210"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="VK150_03795"
     CDS             complement(<1..209)
                     /locus_tag="VK150_03795"
                     /inference="COORDINATES: protein motif:HMM:NF037180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30459.1"
                     /translation="MSAAHEPAVTESLALELGLSKDEWQVILRLLEGRLPTYPELGVF
                     SAMWSEHCSYKSSRIHLKNLPTEGPR"
     gene            complement(268..1413)
                     /locus_tag="VK150_03800"
     CDS             complement(268..1413)
                     /locus_tag="VK150_03800"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HLP30460.1"
                     /translation="MTGNLIRNPDTIAEIFQRACERRELMILVTPYLRFESSFVRMDG
                     GEIHAAATMGREDAMFGLRSQDLKMRFPHGVSFLEAPTELKGFGMFDGRRTLRLGIPG
                     VLHEEDHRGAYRVEHVGRVPVTFSTPKFDLVVGTLVDISTTGARIFSTRDFMEGELEP
                     GEDMAVTIPLTESIRINTKVKLRHVRGRTFGVEYRPQLEGQLLHPLSRWVFEKREEDL
                     ERIARRGVETAASPDSVRSVSAPPRGLLLVSSDPALESALQDLLGGLQPLRRISPTVS
                     ALKEAFALKPALVLYHVPGLSLDERKRLKTMLEPIQGRVPILLLGTSVEGGALLELGS
                     ELKAAVSIVFNPERATFFQRLVQGVLRRNYEGGESPMVPMDREGADR"
     gene            1488..>1980
                     /locus_tag="VK150_03805"
     CDS             1488..>1980
                     /locus_tag="VK150_03805"
                     /inference="COORDINATES: protein motif:HMM:NF014375.4"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HLP30461.1"
                     /translation="MTPRQPSPRTLLAYSAPRSGFGDEWMTFLPIGLGYLQAMLKSRS
                     FPCRVANLSGKGRKEVLAYFREQNPGVVGISMFTFNRKRSYELLTWAREACPGAVLLA
                     GGPHPTHLAEEVFEDCPALDAIVQGEGETTLLGIAERLKAAPGSDLWRRTPGLILREG
                     PTLP"
BASE COUNT          303 a          697 c          671 g          309 t
ORIGIN      
        1 cgggggcctt cggtgggcag gttcttcagg tggatgcggc tggacttgta cgagcagtgc
       61 tcgctccaca tggcgctgaa cacgcccagc tccgggtacg tgggcaggcg gccttccagg
      121 aggcgcagga tgacctgcca ctcgtccttc gacagcccca gctccagggc cagggattcg
      181 gtgacagccg gttcgtgggc agcggacatg gaggctccgg aagccttgat tctagcggcc
      241 cccgcccttc cgaacgaggc ttgacagtca gcggtcggcg ccttcgcggt ccatggggac
      301 catgggggat tccccgccct cgtagttccg tcgcagcacg ccctgcacca gccgctggaa
      361 aaaggtggcc cgctcggggt tgaatacgat ggacacagcc gccttcagct cgctgcccag
      421 ttccaggagg gccccgccct ccaccgaggt gcccaggagc aggatcggca cccggccctg
      481 gatgggctcc agcatggtct tcagccgctt gcgctcgtcc aggctgaggc cgggcacgtg
      541 gtagagcacc agggcgggct tcagcgcgaa ggcctccttg agggctgaga cggtcgggct
      601 gatgcggcgc agaggctgga ggccgcccag caggtcctgg agggccgatt ccagggccgg
      661 gtcgctggag accagcagca ggccccgcgg gggcgccgac acggaacgga ccgaatccgg
      721 agaggccgcc gtctccacgc cccggcgggc gatgcgctcc aggtcctcct cacgcttctc
      781 gaacacccag cgcgacaggg ggtgcagcag ctggccttcc agctggggcc ggtactccac
      841 gccgaaggtc cggccccgga catggcggag cttcaccttg gtgttgatcc ggatggattc
      901 cgtcagcggg atggtgacgg ccatgtcctc gccgggctcc agctcgccct ccatgaagtc
      961 gcgggtgctg aaaatccggg cgccggtggt gctgatgtcc accagggtgc ccaccactag
     1021 gtcgaacttc ggggtgctga acgtcacggg cacccgcccc acgtgctcca cccggtaggc
     1081 tccgcggtgg tcctcctcgt gcagcacccc ggggatgccc aggcgcaggg tgcggcgtcc
     1141 gtcgaacatg ccgaagccct tcagctccgt cggggcctcc aggaagctga cgccgtgggg
     1201 gaaccgcatc ttcaggtcct ggctccgcag gccgaacatg gcatcctcgc gccccatggt
     1261 ggccgcggcg tggatctctc cgccgtccat ccgcacgaag gaggactcga accgcaggta
     1321 gggcgtcacc aggatcatca gctcccgtcg ctcgcaggcg cgctggaaga tctccgcgat
     1381 ggtgtccggg ttgcggatca ggttgcccgt caaggcgcct ccgagggtgt tcgtgcttcc
     1441 atcatgcaga gggtcccgta gactggaaag ccctggaaac ccgcctcatg accccgcgcc
     1501 agccatcgcc ccgaaccctg ctcgcctaca gcgccccccg gagcggcttc ggggacgagt
     1561 ggatgacctt ccttcccatt ggtctcggct acctgcaggc catgctcaag tcccggtcat
     1621 tcccctgccg ggtggccaac ctgagcggaa agggccggaa ggaggtcctg gcctacttcc
     1681 gggagcagaa ccccggcgtg gtgggcatct ccatgttcac tttcaaccgc aagcgctcct
     1741 acgagctgct cacctgggcc cgggaagcct gcccgggcgc ggtactcctg gccggggggc
     1801 cccaccccac ccacctggcc gaggaggtct tcgaggactg ccccgccctg gacgccatcg
     1861 tgcagggaga gggcgagacc acgctcctgg gcatcgccga gcgcctgaaa gccgcgccgg
     1921 gatcggacct ctggcgacgc acgccgggcc tgatcctccg cgagggcccc accctgcccc
//
LOCUS       DATGWW010000257         1991 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_245517, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000257 DATGWW010000000
VERSION     DATGWW010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245517"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..917)
                     /locus_tag="VK150_03810"
     CDS             complement(<1..917)
                     /locus_tag="VK150_03810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30462.1"
                     /translation="MRNRLTPRPWHLAAVAVGFCAVAQEPRVSATELALRGQKAIVAK
                     DYAQAVECYRRAVAQGAKNPRHAVDGARASVLAGDREGAFTLLRQAIGLGFRDVDDLR
                     GSADLTPLREDPRWADLVAGAAANEARFLARHSDPEGAAFITSDVARFWTVYSKLPAA
                     ADPVSLLARDYLDAGSVGLQDFIPNRILSAANLHATLQRHPRYFASIREHTLKVAGAE
                     PAVRRAFRRFKALYAEATFPDITFVMGALNSGGTSTSNGLLIGVDLFGGGPGVPLDEM
                     DDWRRSVIHPHADVPSIVAHELIHFQQRH"
     gene            complement(979..1935)
                     /locus_tag="VK150_03815"
     CDS             complement(979..1935)
                     /locus_tag="VK150_03815"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HLP30463.1"
                     /translation="MVEKVLGHWAALKAAWERGWQLAADLWHEVARAVPPLGRAGSFV
                     FEVLTKYQKDDCLSYAAGLSFWLIVSLVPLSTLLFKLLGAILGSRAYGPAALKTLQEI
                     VPYLPADFVKDAVINSQKIGGMGLSWGVLLFGSYWGISQLDTSLAHVFGLRIKKHRQT
                     RKNHLLRQIAFLVGGLLLMVIFLALIIGGAVRKFLPFKQTDFLPYLGPLLGLVVMTVV
                     LQHLPRLHVKFRHAFLGAGVATALWWLAKWGFGVYLRHTMTWGIMYGSLLGVVAGLTF
                     LYYSCAILLLGAEITAAFYRHETGATTVPPWLRVKVGDLTKS"
BASE COUNT          343 a          666 c          698 g          284 t
ORIGIN      
        1 tggtgcctct gctggaagtg gatcaactcg tgggcgacga tgctgggcac gtcggcgtgc
       61 gggtggatga ccgaccggcg ccagtcgtcc atctcgtcga ggggcacgcc cggtccgcct
      121 ccgaacagat cgaccccgat cagcaggccg ttggaggtcg acgtcccgcc ggaattcagg
      181 gcgcccatga cgaaggtgat gtcggggaag gtggcctccg cgtagagcgc cttgaagcgc
      241 cggaaggccc ggcgcacggc aggctcggcc ccggccacct tcagggtgtg ctcccggatg
      301 ctggcgaagt acctggggtg tcgctggagg gtggcatgaa ggttcgcggc gctgaggatc
      361 cggttcggaa tgaagtcctg caggcccacg ctgccggcat ccaggtagtc gcgggccagc
      421 agactcactg ggtccgcggc ggcgggaagc ttcgagtaga ccgtccagaa gcgcgccacg
      481 tcggaagtga tgaaggccgc gccctcggga tccgagtgcc tggccaggaa gcgggcttcg
      541 ttcgccgcgg cgccggccac caagtccgcc caccgggggt cctccctgag cggggtcagg
      601 tcggcgctgc cgcgcaggtc atcgacatcc cggaacccca gcccgatggc ctgccgcagc
      661 agcgtgaagg ccccctcccg gtcccccgcc aacacgctgg cccgcgcccc gtcgacggcg
      721 tgccgggggt ttttcgcgcc ctgggccacc gcgcgccggt agcactcgac ggcctgggcg
      781 tagtccttcg ccacgatggc cttctggcct cgcagggcca gctccgtcgc ggagaccctg
      841 ggctcctggg ccacggcaca gaagccgacg gccacggcgg cgaggtgcca ggggcgtggt
      901 gtgagacggt tccgcaaaga ggggcctcca ctggagatgg agggagctac gaccgcctgt
      961 ccaagcggtt tagaacggct aggacttcgt caggtccccg accttcaccc gtagccaggg
     1021 cggcacggtg gtggcgccgg tctcgtgacg gtagaaggcg gcggtgatct cggcgcccag
     1081 cagcaggatg gcgcagctgt agtagaggaa cgtcaggcca gccaccacgc ccagcaggga
     1141 gccgtacatg atgccccagg tcatggtgtg ccgcaggtag acgccgaagc cccatttcgc
     1201 aagccaccac agcgccgtgg caacgccggc gccgaggaag gcgtggcgga acttcacgtg
     1261 cagccgcggg aggtgctgca gcaccaccgt catcaccacc aggcccagca gcgggcccag
     1321 gtagggcagg aaatccgtct gcttgaaggg caggaacttc cgcacggcgc ctccgatgat
     1381 aagggcgagg aagatcacca tcagcagcag cccgccgacc aggaaggcga tctggcgcaa
     1441 caagtggttc ttccgcgtct ggcggtgctt cttgatgcgc aacccgaaga cgtgcgcaag
     1501 gctcgtgtcc agctggctga tgccccagta gctgccaaac agcagcacgc cccaggagag
     1561 gcccatgccg ccgatcttct gactgttgat gacagcatct ttcacgaagt cggccgggag
     1621 gtagggcacg atctcctgca gggtcttcag ggcggcgggg ccgtaggccc ggctgcccag
     1681 gatcgcgccc agcagcttga agagcagggt ggagagcggc accaggctca cgatcagcca
     1741 gaaactgagc ccggcggcgt agctcaggca atcgtctttc tggtacttgg tcagcacttc
     1801 gaacacgaag gagcccgccc ggcccagggg gggcaccgcc cgggcgacct cgtgccacag
     1861 gtccgccgct agctgccagc cccgctccca ggcggccttc agcgcagccc agtgacccag
     1921 gaccttctcg accacgcgcc ctcctttccg gctcagaacc ggacgggatg ccggggcagc
     1981 aggtacatca g
//
LOCUS       DATGWW010000258         1604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_245522, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000258 DATGWW010000000
VERSION     DATGWW010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245522"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..643
                     /locus_tag="VK150_03820"
     CDS             158..643
                     /locus_tag="VK150_03820"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HLP30464.1"
                     /translation="MNRLLRALLGALVLVLSTPVLADTAPDFSLPGQDGKPVRLSELR
                     GKVVYVDFWASWCGPCRQSFPWMNQLQAAWADKGLVIVAINLDQERPLADRFIEAMKP
                     RFPVAFDPQGTTAEQYKVQGMPSSYIIDRQGNIHARHMGFREHETAQVTEAIRQLLEA
                     K"
     gene            646..858
                     /locus_tag="VK150_03825"
     CDS             646..858
                     /locus_tag="VK150_03825"
                     /inference="COORDINATES: protein motif:HMM:NF025452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4266 domain-containing protein"
                     /protein_id="HLP30465.1"
                     /translation="MRRLFLLGAALAITGCTLEPVKPWERDLLARPEMQLVNDPVEAS
                     LDEHIHFSKEGAFGGRGAGGGGCGCN"
     gene            849..>1604
                     /locus_tag="VK150_03830"
     CDS             849..>1604
                     /locus_tag="VK150_03830"
                     /inference="COORDINATES: protein motif:HMM:NF023516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3570 domain-containing protein"
                     /protein_id="HLP30466.1"
                     /translation="MQLKKPPLRQALALASCALVHGTAHGAEGDWKLSGALLSYDEKD
                     RISVEATTLFATKDLGDERSLTVRGVYDSLSGASPNGASATTTPQTFTGASGQSAYTT
                     PAYQLPTKTFSDERAAAGVDYVTRTSPTSGRTLSADISKESDYLSMGGSATWTEDYNN
                     KLTTLAFGLGGSYDTVQAKGFPTGLQSTSAAATTTCASGGGGGGDEDDEGGGCEEDGK
                     IKTTLNLLTGVTQVLSRRSLAQFNFTLAHSDGYL"
BASE COUNT          290 a          576 c          478 g          260 t
ORIGIN      
        1 gggtcataaa cccttttgat cttgatggtc attggcgccc tcccgtgctt tctttaaccg
       61 tagagtgcgg gcccgttcac atctcgccat tgggaattat ttcccaatct gttttaatag
      121 acccaccgaa cccgtaagag atcaggaggt ccaccccatg aaccgtctcc tccgcgccct
      181 gctgggcgcg ctggtcctcg ttctctccac gcccgtcctg gcggacaccg cccccgactt
      241 cagcctcccc ggccaggacg gcaagcccgt ccggctctcg gagctgcggg gcaaggtggt
      301 ctatgtggac ttctgggcct cctggtgcgg gccttgccgt caatccttcc cgtggatgaa
      361 ccagctgcaa gcggcctggg ccgacaaggg gctggtcatc gtggccatca acctcgatca
      421 ggagcgtccc ctggcggatc gcttcatcga ggccatgaag ccccggttcc ccgtcgcctt
      481 cgacccccag ggcacgaccg ccgaacagta caaggtccag ggcatgccct cctcctacat
      541 catcgatcgg cagggcaaca tccatgcgcg tcacatgggg ttccgggaac atgaaacggc
      601 ccaggtgacc gaagccatcc gtcagttgct ggaggcgaag tagtcatgag acgtctgttc
      661 ctgctcggcg ccgcgctggc gatcacgggc tgcaccctgg aaccggtgaa accctgggag
      721 cgcgacctgc tcgcgcgccc cgagatgcaa ctggtcaatg acccggtgga ggccagcctc
      781 gacgagcaca tccacttcag caaggagggg gcgttcggcg ggcggggcgc gggcggcgga
      841 ggctgcggat gcaactgaag aagccacccc tgcggcaggc cctggccctt gccagttgcg
      901 cgctggtcca cggcacggcc cacggggcgg aaggcgactg gaagctctcc ggcgccctcc
      961 tctcctatga cgaaaaggat cgcatctcgg tagaggctac caccctcttc gccaccaagg
     1021 acctgggcga cgagcggagc ctcaccgtgc gcggtgtcta tgattccctc tccggcgcct
     1081 cgcctaacgg tgcctcggcc acgaccacgc cgcagacctt caccggcgcc tcaggccaga
     1141 gcgcctacac cacgccggcc taccagttgc ccaccaagac gttctccgac gagcgcgccg
     1201 ccgcgggcgt cgactacgtg acccgcacct caccgacctc cggccggacc ctgagcgccg
     1261 acatttccaa agagagcgat tacctctcca tgggcggcag cgccacctgg accgaggact
     1321 acaacaacaa gctgaccacc ctcgccttcg gcctcggcgg cagctacgac acggtgcagg
     1381 ccaagggctt ccccaccgga ctccaatcca ccagcgccgc ggccaccacc acctgcgcga
     1441 gcggcggcgg tggcggcggt gatgaagacg atgaaggcgg cggatgcgaa gaggacggca
     1501 agatcaagac cactctcaac ctgctgaccg gcgtcaccca ggtattgagc cggcgcagcc
     1561 tggcgcagtt caacttcacc ctcgcccatt cggacggcta cctc
//
LOCUS       DATGWW010000259         2319 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_66287, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000259 DATGWW010000000
VERSION     DATGWW010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66287"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..759)
                     /gene="atpB"
                     /locus_tag="VK150_03835"
     CDS             complement(28..759)
                     /gene="atpB"
                     /locus_tag="VK150_03835"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HLP30467.1"
                     /translation="MEHHASLLAKWLTQVLGLAQHPWPGFAHGAPLSVLERYDHLLNA
                     ALAALLAMVITTLVRKNLTRIPGPLQQVFEGVVGGLKDMINDNIAHHGEKYLPFIGTM
                     ALFVFFNNLFGLLPALSPGTSNWNVTLGAALVVFGYYNFHGMKEQGVGKYWLHFAGPI
                     WWLAPLMFPLEILGLLSRILSHSLRLFGNIAGEHVVAGIFFGLMPLLLPVPMMFLGLF
                     FGLIQTFVFTMLATIYLSGAVSHEH"
     gene            complement(772..1167)
                     /locus_tag="VK150_03840"
     CDS             complement(772..1167)
                     /locus_tag="VK150_03840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30468.1"
                     /translation="MTPPEDGEDHLRRVTRAMVVLGVAGILLWGLLRSWTAALAFGVG
                     ALTSLAFWTLHRLFTGRMLTPSVRRRWLYGVLSMGKLALIALVLRGMMGRYPAEALPL
                     ALGVLLFVAGILLEALRLMFQKPESLPPD"
     gene            complement(1154..1441)
                     /locus_tag="VK150_03845"
     CDS             complement(1154..1441)
                     /locus_tag="VK150_03845"
                     /inference="COORDINATES: protein motif:HMM:NF021073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HLP30469.1"
                     /translation="MIFKRNEGADPGERALWGDLMSLGLTFPLCIALGFFLGRWIGGW
                     FGHPVAGQWLGLVWGIGAAFWELYKVNRRMARRDEAELQRLREGKGPDDPA"
     gene            complement(1686..>2319)
                     /locus_tag="VK150_03850"
     CDS             complement(1686..>2319)
                     /locus_tag="VK150_03850"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HLP30470.1"
                     /translation="ASEWVTPLSYIAGASMILGNVAAVKQESMKRLLAYSSIAHVGYM
                     LLGVLSGDPKAGAQAVWLYMLIYIVMNTGAFAVVIYLQGKGESERIEDFKGLGRKHPV
                     LAFAMLVFLLSLAGIPPLLGFFGKFYLFKLAIEQGFVTLTVLALLTSAVSAYYYLGVV
                     SQMYFKDAEGEAAPMGAAQVFIVALACIVVLVGTAFGPWLLDWASLVFWV"
BASE COUNT          444 a          751 c          812 g          312 t
ORIGIN      
        1 ggggggcctg cggccccccg gacagcatca atgctcgtgg gagacggcgc ccgagaggta
       61 gatggtggcc agcatggtga acacgaaggt ctggatcagg ccgaagaaga ggcccaggaa
      121 catcatgggg acgggcagca ggaggggcat caggccgaag aagatgcccg ccaccacgtg
      181 ctcgccggcg atgttgccaa acagtcgcag ggagtggctg aggatgcggc tgaggaggcc
      241 caggatctcc agggggaaca tcaggggggc caaccaccag atggggcccg cgaagtgcag
      301 ccagtacttg ccgacgccct gttccttcat gccgtggaag ttgtagtagc cgaagaccac
      361 cagcgccgcg cccagggtga cgttccagtt gctggtgccg gggctcaggg cggggagcag
      421 gccgaagagg ttgttgaaga agacgaagag cgccatggtc ccgatgaagg gcaggtactt
      481 ctcgccgtgg tgcgcgatgt tgtcgttgat catgtccttc aggccgccca ccacgccctc
      541 gaagacctgc tgcagggggc cggggatgcg ggtgaggttc ttccggacga gggtggtgat
      601 gaccatggcc agcagggccg ccagggccgc gttcagcagg tggtcgtacc gctccaggac
      661 cgagaggggc gccccgtggg cgaagccggg ccaggggtgc tgggcgagcc ccaggacctg
      721 ggtgagccac ttggcgagca acgatgcgtg gtgttccatc tgggtctgac ctcaatcagg
      781 cgggagggat tcgggtttct ggaacatcag ccggagggct tccaggagaa tgccggccac
      841 gaagaggagc acccccaggg ccagcggcag ggcttccgcc gggtatctcc ccatcatccc
      901 acgcagaacc agggcgatca acgccagttt gcccatggac aggacgccgt acagccacct
      961 gcggcgcacc gagggggtca gcatgcggcc cgtgaagagt cggtggaggg tccagaaggc
     1021 caggctggtc agggccccca cgccgaaggc cagggccgcc gtccaggagc gcaggaggcc
     1081 ccacaggagg atccccgcca ccccgaggac gaccatggcc cgggtcacgc gccggaggtg
     1141 gtcctcgccg tcctcaggcg gggtcatcgg gccccttccc ttcccggagc cgctgcagct
     1201 ccgcctcgtc ccgccgggcc atgcgccggt tcaccttgta gagctcccag aaggccgcgc
     1261 cgatgcccca gaccaggccc agccactggc ccgcgacggg gtggccaaac cagcccccga
     1321 tccagcggcc caggaagaag cccagggcga tgcagagggg aaaggtcagg ccaagggaca
     1381 tcaagtcccc ccatagggcc cgctcgcccg gatcggcccc ctcgttgcgc ttgaagatca
     1441 caccggctcc aaagacacgg cccggggccg tcccccaagt gtaagcctgg ccgcgaggta
     1501 caagcagaac gcccggtggg tgtgtgcccc cacccccgga gagaaaagcg aagaaccggc
     1561 ttagccgatt cttcgcgcgg gggtccgggg gtgtgcgcat aagcgtggaa cccccggata
     1621 gaaaggcgaa ggaccggctt agccggtcct tcgcgcggga gtccgggggt tctccccgga
     1681 gaacatcaaa cccagaacac cagactggcc cagtccagca gccagggacc gaaggcggtt
     1741 cccaccagca ccacgatgca ggccagcgcc acgatgaaga cctgcgccgc gcccatgggg
     1801 gcggcctcgc cctccgcgtc cttgaagtac atctggctca ccacgcccag gtagtagtag
     1861 gcgctcacgg cgctcgtcag cagcgcaagg accgtgaggg tgacgaagcc ctgctcgatg
     1921 gccagcttga aaaggtagaa cttcccgaag aagcccagca gcggcgggat gccggcgagg
     1981 ctgaggagga acaccagcat ggcgaaggcc agcacggggt gcttgcggcc caggcccttg
     2041 aagtcctcga tgcgctcgct ctcgcccttg ccctgcaggt agatcaccac ggcgaaggcc
     2101 ccggtgttca tcacgatgta gatgagcatg tagagccaga ccgcctgagc gccggccttc
     2161 ggatcgcccg agagcacgcc cagcagcatg tagcccacgt gggcgatgct ggagtaggcc
     2221 agcaggcgct tcatgctctc ctgcttcacg gcggccacgt tgccgaggat catgctggcc
     2281 cccgcgatgt agctgagggg cgtcacccac tcgctggcc
//
LOCUS       DATGWW010000260         1721 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_66331, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000260 DATGWW010000000
VERSION     DATGWW010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66331"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..545
                     /locus_tag="VK150_03855"
     CDS             <1..545
                     /locus_tag="VK150_03855"
                     /inference="COORDINATES: protein motif:HMM:NF012973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FHIPEP family type III secretion protein"
                     /protein_id="HLP30471.1"
                     /translation="TLKETTPRLVDDLIPNVISVTTLQKVLHNLLRERVPVRDLGRIL
                     EATADGATMTKDIGFITEYVRQALGRVLTSPHVSESGELGVLVLDPSLEQTLQGGIEQ
                     TDRGSFLALEPGRTQEVLSRIANGIAAMLPGAQPVLLTNPVVRPHLRRLLERALPHLV
                     VLSHSEVPMDVRVVNLGTVS"
     gene            556..>1721
                     /gene="flhF"
                     /locus_tag="VK150_03860"
     CDS             556..>1721
                     /gene="flhF"
                     /locus_tag="VK150_03860"
                     /inference="COORDINATES: protein motif:HMM:TIGR03499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA];
                     GO_process: GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HLP30472.1"
                     /translation="MRVKTFEAGSMQDALDIVKREMGEEAFILSTRTRRRPAALGLGE
                     EAVIEVTAAVDEGPAGTPAQTSSVLPGPANGTSLTYGLRPSLATPPPPPVTRAHRELA
                     PPAPPMDLQPLRRELLEIKGAVAALKDNDLRNASILKELDQMKALLSRIQRQGMPPAQ
                     LHLPPSLLELYGDLVANDVEPLIALRLCEYAQRALTDQDGDAAAGAVDAERARLFLRR
                     VIADFIPVAPPIQLDPGKMRVAALVGPTGVGKTTTLAKLAAYAQLHLKQKVALLTLDT
                     YRMAAVDQLQQYAQILQVPLHVALTVEDLRSALRFYQDRALVLIDTPGHSPKDTETLA
                     QLRNLLDELPEVETHLVLSATTKPRDLTEIAARYEPLHPTRLLFTKLDETSTYGP"
BASE COUNT          274 a          702 c          522 g          223 t
ORIGIN      
        1 acaccctcaa ggagaccacg ccccggctgg tggacgacct catccccaac gtcatctccg
       61 tcaccaccct ccagaaggtg ctgcacaacc tcctgcgcga gcgggtgccc gtgcgcgacc
      121 tgggccgcat cctcgaggcc accgccgacg gcgccaccat gaccaaggac atcgggttca
      181 tcaccgagta cgtgcggcag gccctggggc gcgtcctcac cagcccccac gtgtccgaga
      241 gcggcgagct gggcgtgctg gtgctggatc cctccctgga gcagaccctc cagggcggca
      301 tcgagcagac ggaccggggc agcttcctgg ccctggagcc cggccgcacg caggaggtgc
      361 tctcgcgcat cgccaacggc atcgcggcca tgctgcccgg cgcccagccc gtgctcctca
      421 ccaacccggt ggtccggccc cacctccggc gcctgctcga acgggccctg ccccacctcg
      481 tggtgctgag ccacagcgag gttcccatgg atgtccgcgt cgtgaacctg ggaaccgtct
      541 catgaagggc caaccatgcg cgtgaagacc ttcgaagccg gatccatgca ggacgccctg
      601 gacatcgtga agcgcgagat gggggaggag gccttcatcc tctccacccg cacccgccgg
      661 cggcccgccg ccctgggcct gggcgaggag gccgtcatcg aggtgacggc ggccgtggac
      721 gaggggccgg ccggcacgcc agcccagacc tcctccgtgc tcccgggccc cgccaatggc
      781 acgtcgctta cctacggcct ccgcccttcc ctggccacgc cgcccccccc tccggtaacc
      841 cgcgcccacc gagagctggc cccgcccgcg ccgcccatgg acctgcagcc cctccgccgc
      901 gagctgctgg agatcaaggg cgccgtggcc gcgctcaagg acaatgacct gcgcaacgcg
      961 tcgatcctga aggaactgga tcagatgaag gcgctgctca gccgcatcca gcgccagggc
     1021 atgccccccg cccagctgca cctgcccccg agcctgttgg agctctacgg cgacctcgtg
     1081 gccaacgacg tggagcccct catcgcgctg cgcctctgcg aatacgccca gcgggccctc
     1141 accgaccagg acggcgacgc cgccgccggg gccgtggatg cggagcgggc tcggctcttc
     1201 ctgcgccgcg tcatcgccga cttcatcccc gtggcgccgc ccatccagct cgatcccggc
     1261 aagatgcgcg tggccgccct ggtgggtccc accggcgtgg gcaagaccac caccctggcc
     1321 aagctcgccg cctacgccca gctgcacctc aagcagaagg tggcgctcct caccctggac
     1381 acctaccgca tggcggcggt ggaccagctg cagcagtacg cccagatcct ccaggtgccc
     1441 ctgcacgtgg ccctcacggt ggaggacctg cgcagcgccc tgcgcttcta ccaggaccgc
     1501 gccctggtgc tcatcgacac gcccggccac agccccaaag acaccgagac cctggcgcag
     1561 ctaaggaacc tgctggacga actgcccgag gtggagacgc acctggtgct gtccgccacc
     1621 accaagcccc gcgacctcac cgagatcgcc gcccgctacg agcccctgca ccccacgcgc
     1681 ctcctcttca ccaagctcga cgagacctcc acctacgggc c
//
LOCUS       DATGWW010000261         2195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_293210, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000261 DATGWW010000000
VERSION     DATGWW010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293210"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1442
                     /locus_tag="VK150_03865"
     CDS             <1..1442
                     /locus_tag="VK150_03865"
                     /inference="COORDINATES: protein motif:HMM:NF013784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HLP30473.1"
                     /translation="KISVKLVSGTGIGTIAVGVAKAGADILYIAGGDGGTGAATLGSM
                     KHAGLPWEFGLTEANRALRENHLRDQVELRVDGGLLTGKDLITAAILGAEGFEFGKLL
                     LVAEGCVMARICEKNTCPAGIATHDPKFKARYQGSPEAIERMLAHLAEDVRRHLSRLG
                     LASLGDLRDRTDLLTVAPEHAAFVRDRKLDLSTFLDPPPEVPGAQATPVQRDGVGALN
                     RALVEAARPFLDTGARQQLAFRISTDDRGVLATLAGEVAEGVRERRRTGQDLAVPGGL
                     DLTFTGSAGQGFGAFLTEGLHVRLLGEANDSVGKSMSGGTLALCPAPGASFVPEENAI
                     LGNGALYGATAGRFFARGLAGDRFAVRNSGATAVVEGTGHHACEYMTRGAVAILGRVL
                     ANAGAGMTGGCLFLRRDHEARVNRDYLAPIPWRPEEEQLFRSLLEGHALETGSVTARA
                     LLADWPGTLDTFLPFVPLAVAAALTHPLG"
     gene            complement(1465..>2195)
                     /locus_tag="VK150_03870"
     CDS             complement(1465..>2195)
                     /locus_tag="VK150_03870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30474.1"
                     /translation="YCYVRDYPNALHTRDEWGGWVTPKLNAPELLWAQRHRLHGERVF
                     MASATDPYQPLERQYRLSRRCLEVLLLCPTTEVILHTRSPLVLQDLELLKAFGDRLSV
                     GLSIPTDDDTVRQVVEPHAPAIPSRWAAAERLSAAGIAVCIAVAPLMAVHDPHAFARR
                     AKASGASKAWVGGLRLLAQDPFYKTLADHGWLKVLTSDYAEEVRSAFQAVFPGRRRVK
                     KAPEPPALPVRAPVPQPGLFDRVG"
BASE COUNT          309 a          788 c          813 g          285 t
ORIGIN      
        1 cgaagatcag cgtcaagctg gtctcgggca cagggatcgg caccatcgcc gtgggcgtgg
       61 ccaaggccgg ggccgacatc ctctacatcg ccgggggcga cggcggcacc ggcgcggcga
      121 cgctgggctc catgaagcac gcgggtctgc cctgggagtt cggcctcacc gaggcgaacc
      181 gggctctgcg ggaaaatcac ctgcgcgacc aggtggagct gcgggtggac ggcgggctgc
      241 tcacgggcaa ggacctcatc accgcggcca tcctcggcgc cgagggcttc gaattcggca
      301 agctgctcct ggtggccgaa ggctgcgtca tggcccgcat ctgcgagaag aacacctgcc
      361 cggccggcat cgccacccat gaccccaagt tcaaggcccg ctaccagggg agccccgagg
      421 ccatcgagcg catgctcgcc cacctcgccg aggatgtgcg tcggcacctg tcgcggctgg
      481 gcctggcgag cctcggggac ctgcgcgacc gcaccgacct gctgaccgtc gcgccggaac
      541 atgccgcctt tgtgcgggac cggaagctgg atctctccac cttcctcgat cctccgccgg
      601 aggtccccgg cgcgcaggcc acgccggtcc agcgggatgg cgtgggcgcg ctcaaccggg
      661 ccctggtgga ggcggcccgg cccttcctcg acaccggagc ccggcagcag ctcgcgttcc
      721 gcatcagcac cgacgaccgg ggcgtgctgg ccaccctggc gggcgaggtg gccgaagggg
      781 tccgcgaacg ccgccgcacc ggccaggatc tggccgtccc cggcgggctg gacctgacct
      841 tcaccggcag cgccggccag ggcttcgggg ccttcctcac ggaggggctg cacgtgagac
      901 tgctgggcga ggccaacgat tccgtgggca agtccatgtc cggcggcacc ctcgccctct
      961 gccccgcccc cggcgccagc ttcgttccag aggagaacgc catcctgggc aacggggccc
     1021 tctacggcgc caccgcgggc cgcttcttcg cccggggcct ggcgggggac cgcttcgccg
     1081 tgcgcaacag cggcgccacg gcggtggtgg agggcacggg ccaccacgcc tgcgagtaca
     1141 tgacccgggg cgccgtggcc atcctcggcc gcgtgctggc caacgccggg gcgggcatga
     1201 ccggcggctg cctcttcctc cggcgggacc acgaggcccg cgtgaaccgc gactacctgg
     1261 cgcccatccc ctggcgcccg gaggaggagc agctgttccg gagcctgctg gagggtcacg
     1321 ccctggagac cggcagcgtc acagcccggg ccctgctggc cgactggccg ggaaccctgg
     1381 acaccttcct tcccttcgtg cccctggcgg tggccgcggc cttgacccac cccctgggct
     1441 gatccgacgg aaggcaccgc acgcctagcc cacccggtcg aagaggcccg gctgcggcac
     1501 cggggcgcgg accggcaggg cgggcggctc cggtgccttc ttcacgcgac ggcgcccggg
     1561 gaagacggcc tggaaggcgg atcgcacctc ctcggcgtag tccgaggtca gcaccttcag
     1621 ccaaccatgg tcggccagcg tcttgtagaa gggatcctgc gcgaggaggc gcaggcctcc
     1681 gacccaggcc ttggaggccc cgctggcctt ggcgcggcgg gcgaaggcgt ggggatcgtg
     1741 cacggccatg aggggcgcca cggcgatgca gaccgcgatg cccgccgccg agagccgctc
     1801 ggcggcggcc cagcggctgg ggatggcggg ggcgtggggc tccaccacct ggcgcacggt
     1861 gtcgtcgtcg gtggggatcg aaaggcccac cgagaggcgg tccccgaagg ccttgagcag
     1921 ctccagatcc tgcagcacca ggggtgagcg ggtgtgcagg atgacctcgg tggtgggaca
     1981 gagcagcagc acctcgaggc accggcggct gaggcggtac tgccgctcca ggggctggta
     2041 ggggtccgtg gccgaggcca tgaacacccg ctcgccatgc agccggtggc gctgggccca
     2101 gagcagctcg ggggcgttca gcttgggcgt cacccagccg ccccattcat cgcgggtatg
     2161 gagggcgttg gggtagtccc gcacgtagca gtagc
//
LOCUS       DATGWW010000262         1829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_245947, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000262 DATGWW010000000
VERSION     DATGWW010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245947"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1224)
                     /locus_tag="VK150_03875"
     CDS             complement(<1..1224)
                     /locus_tag="VK150_03875"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP30475.1"
                     /translation="MRDRKDWSQMRESIIGLGSESSRRTYYPELMGRIAELEGAREDL
                     RRSEENLHTLFDSLYDAILIHDWEGRLLEVNEAMLAMYGVTRENFRDFTLQDYSAPSQ
                     PRTGHDLDFTHQLARLRQEGSLMFEWRARRPLQPAVTFDVEVSLRRATWYDQEAVVAV
                     VRDVSERKRLEGMLQQSQKLDSLGQLAGGVAHDTNNMLGVIIGYSDLVLDKLPEGSPA
                     RGDIEQIRKAALHSADLNRQLLGFARRQTIQPVVADLNQLVESTQKMLRRLIGEQHAV
                     IWKPATALWQVCVDPSQLDQVLTNLVLNARDALGASGSITLETANATVDEAFQQLHPD
                     AEPGAYVVLRVTDTGHGMSPEVQARIFEPFFTTKGLGHGTGLGLAMVYGIARQNRGFV
                     SVYSSPGLGTTFSFYL"
     gene            complement(1225..>1829)
                     /locus_tag="VK150_03880"
     CDS             complement(1225..>1829)
                     /locus_tag="VK150_03880"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HLP30476.1"
                     /translation="DPYLTACTGMDALVHAIEAFVSNAHSPITDLHALEAIRLVSTHL
                     RASAEAPQDLELRTQIMQASLHAGLAFSNASLGCVHAMAHSLGGFKDLAHGECNALLL
                     PHVMDYNFSTAPERFRLIVAAMGCEVKGLSDRECRARLIDHAMDLRRDCGIDLGLAAR
                     GIHTTDLGRLAGKAILDPCNATNPRVPRQEDLKSIYSEAM"
BASE COUNT          288 a          576 c          647 g          318 t
ORIGIN      
        1 gaggtagaag ctgaaggtgg tgcccaagcc cgggctgctg tagaccgaca cgaagccgcg
       61 gttctgacgg gcgatgccgt agaccatggc caggcccagc ccggttccgt gccccaggcc
      121 cttggtggtg aagaagggtt cgaagatgcg ggcctgcacc tcggggctca tgccgtggcc
      181 ggtgtcggtg acccgtagca ccacgtaggc gccaggctcc gcatccgggt gcagctgctg
      241 gaaggcctcg tccacggtgg cattggcggt ctccagtgtg atgctgccgc tggccccgag
      301 ggcatcccgc gcgttcagca ccaggttggt gaggacctgg tccagctggg agggatccac
      361 gcagacctgc cacagggcag tggcgggctt ccagatcacc gcgtgctgct ccccaatcag
      421 gcggcggagc atcttctggg tggactccac cagctggttc aggtcggcca ccacgggctg
      481 gatggtctgc cggcgcgcga acccgagcag ctgccggttg aggtccgccg agtggagggc
      541 tgccttccgg atctgctcga tgtctccgcg ggcggggctg ccttcgggca gtttgtccag
      601 cactaggtcg gaatacccga tgatcacgcc cagcatgttg ttggtgtcgt gggccacgcc
      661 tcccgccagc tgccccaggg aatcaagctt ctgcgactgc tgcagcatgc cctccaggcg
      721 cttgcgctcg gacacgtccc gcaccacggc caccaccgcc tcctggtcgt accaggtggc
      781 gcgccggagg gagacttcca cgtcgaaggt caccgccggc tggagggggc gccgcgcgcg
      841 ccactcgaac atcagcgagc cttcctgccg cagccgggcc agctggtgcg tgaaatccag
      901 gtcgtgcccg gtcctgggct gggaaggggc ggaataatcc tgaagcgtga agtcacggaa
      961 gttctcccgg gtgacgccgt acatggccag catggcctcg ttcacttcca gcagtcggcc
     1021 ctcccagtcg tggatgagga tggcgtcgta gaggctgtcg aacagcgtgt ggaggttctc
     1081 ctcggagcgc cgcagatcct cgcgggcccc ttcgagttcg gcgatgcgcc ccatgagctc
     1141 ggggtagtag gttctccggg aggactcgct tcccagcccg atgatgcttt cccgcatctg
     1201 gctccagtcc ttgcggtcgc gcatctacat ggcttccgaa taaatggatt tgaggtcctc
     1261 ctggcggggg acccgggggt tggtggcgtt gcagggatca agaatggcct taccggcgag
     1321 cctgccgaga tcggtggtgt ggatacccct ggccgcgagc cccaggtcga tgccgcagtc
     1381 ccttcgcagg tccatggcgt ggtcaatcag gcgcgcccga cactcccggt cgctcaggcc
     1441 cttgacctcg caccccatgg ccgcgacgat caggcggaac cgctcgggcg ccgtggagaa
     1501 gttgtagtcc atgacgtggg gaagcaggag ggcattgcac tccccgtggg ccagatcctt
     1561 gaacccgccg aggctgtggg ccatggcgtg gacgcacccg aggctggcat tggagaaggc
     1621 cagcccggca tggaggctgg cctgcatgat ctgggtgcgc agctccaaat cctgcggggc
     1681 ctcggcggag gcgcgaaggt gcgtggagac caggcggatc gcctccaggg cgtgaaggtc
     1741 ggtgatcggg gagtgagcat tggacacgaa ggcttcgatg gcatgcacca gcgcgtccat
     1801 gcccgtgcag gccgtgaggt agggatcca
//
LOCUS       DATGWW010000263         1578 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_428686, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000263 DATGWW010000000
VERSION     DATGWW010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428686"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(27..1334)
                     /gene="dctA"
                     /locus_tag="VK150_03885"
     CDS             complement(27..1334)
                     /gene="dctA"
                     /locus_tag="VK150_03885"
                     /inference="COORDINATES: protein motif:HMM:NF002461.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006835 - dicarboxylic acid transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DctA"
                     /protein_id="HLP30477.1"
                     /translation="MLKRAASKLYNWVAVAILLGALLGHFFPIIAVKMQPLADGFIAL
                     IKMLIPPVILCSVVLGIAGSGSIKKAGRVGGKAILYFEIVSTLALVIGLVMANVFGPG
                     RSFHADPSKLDPKLVAGYVAQAQHLTITDHLLKMIPKTMFSAFTDGDILQVLLISVLL
                     GFAVAALSEKHKAPLIGFLENVSKMFFGVMHQILYLAPIGAGAAIAYTIGKFGLKSLV
                     PMAQLIFLFYATCALFIFVVLGIIARLAGFNIFKVVGYIKDELLLVMATSSSESALIP
                     LMEKMEKLGLSKSIVGLVIPTGYSFNLDGTNIYMTLASLFIAQALGIELTLGQQMGIL
                     VVAMITSKGAAGVTGSGFITLAATLAVVPGIPVAGMALILGIDKFMSEARAITNHIGN
                     CIAAVVMASWEKELDWDTFHATLGRPNTPVPVVEAPVLANEIE"
BASE COUNT          301 a          445 c          563 g          269 t
ORIGIN      
        1 cccccgcttc gtcggtcctc aaagtgtcat tctatttcgt tggcaagcac cggcgcctcg
       61 accaccggca caggcgtgtt cggccgcccc agcgtggcgt ggaaggtgtc ccagtccagt
      121 tccttctccc aactggccat gaccacggcg gcgatgcagt tgccgatgtg gttggtgatg
      181 gcccgggcct cggacatgaa cttgtcgatg ccgaggatga gcgccatgcc cgccacgggg
      241 atgccgggca ccaccgccag ggtggccgcc agggtgatga agccggaacc ggtgacgccc
      301 gcggcgccct tgctcgtgat catggccacc accaggatgc ccatctgctg gcccagcgtg
      361 agctcgatgc cgagcgcctg ggcgatgaag agggaggcca gggtcatgta gatgttggtg
      421 ccgtccagat tgaaggaata gcccgtgggg atgaccaggc cgacgattga tttcgacagg
      481 cccagcttct ccatcttctc catgaggggg atgagcgccg attcggacga actggtggcc
      541 atgacgagca gcagctcgtc cttgatgtag cccaccacct tgaagatgtt gaagccggcc
      601 agccgggcga tgatgccgag caccacgaag atgaagaggg cgcaggtggc gtagaagagg
      661 aagatcagct gggccatggg caccagcgac ttgaggccga acttgccgat ggtgtaggcg
      721 atggcggcgc cggcgccgat gggggcgagg tagaggatct ggtgcatgac gccgaagaac
      781 atcttgctga cgttctccag gaagccgatg agcggcgcct tgtgcttctc gctcagggcc
      841 gccacggcaa agccgagcag cacggagatc agcagcacct ggaggatgtc gccatcggtg
      901 aaggcgctga acatggtctt ggggatcatc ttcagcaggt ggtccgtgat ggtcaggtgc
      961 tgcgcctgcg ccacgtagcc cgccaccagc ttcggatcca gcttggaggg atccgcatgg
     1021 aagctgcggc cggggccgaa gacgttggcc atgacgaggc cgatcactag ggccaaggtg
     1081 ctgacaatct cgaagtacag gatggccttg ccgcccacgc ggccggcctt cttgatgctg
     1141 ccggaacccg cgatgcccag caccacgctg cagaggatca ccggcgggat gagcatcttg
     1201 atgagggcga tgaagccgtc ggccagaggc tgcatcttca ccgcgatgat ggggaagaag
     1261 tggccgagca gggcgccgag gaggatcgcg acggcgaccc agttgtagag cttcgaggct
     1321 gcgcgcttga gcatggggtg ggtcctttca gaaacgcggg catgggggat gggcggccct
     1381 ggcgggccag acggacagag cggtgggaaa gatgtcgagg gtcaaggcgc gaggcggagg
     1441 agaacccctg gagctgcgcg gacgttttca catgacctgt gggtaggttt ccccatactg
     1501 cgaccgccgg accgtggtcg gccgttctgg aagttgattc cgggaattga aacttttgaa
     1561 agcggtaccc gggaggcg
//
LOCUS       DATGWW010000264         1665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_293301, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000264 DATGWW010000000
VERSION     DATGWW010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293301"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(213..497)
                     /locus_tag="VK150_03890"
     CDS             complement(213..497)
                     /locus_tag="VK150_03890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30478.1"
                     /translation="MKFKATPVSAFLAGNFSAITWPFLWPLFHDTSPSASLWLVVGVL
                     GLIAVPAHVFVLGLNRSPADRARGLDLPLLKRIGAWLVGGGLGALVLALK"
     gene            complement(656..1516)
                     /locus_tag="VK150_03895"
     CDS             complement(656..1516)
                     /locus_tag="VK150_03895"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HLP30479.1"
                     /translation="MTIEKYRHPFVFYGLATAIPWAFWFAAAWVSHLTPAGPMLALAA
                     GLLGILGLLAPTLIALRMIWPDRSMRADLMGRLVGLQGVKPFYLFLTCFLMLGSILLA
                     QAVSVAFGYSADQFTLRGESSFSAGLFPGWFLLILAPLVEELAWHSYGTDCLRQRMNL
                     LKASLLFALFWGLWHLPLGFIKDYYHANVAESGALYSLNFLVSLFPFVILMNWLYYKS
                     NRSVLVAIVFHITAGVFNEMFATHPDSKVIQTGLLLVLAAVVVVKERDFFFDREYEEP
                     ASPPPAPAPA"
BASE COUNT          342 a          485 c          600 g          238 t
ORIGIN      
        1 tgctactaca tcggttcggg gaccgagtag tctcgccccc tgtcggcgca tggtaccgct
       61 acacggtttt tgcactcagg atccgacgaa gcggtagcac gttttcagtg agccgccata
      121 gggggagcac cgtttcctgg aagtcttgtt ccgtggtgtc gtgcgtggcg aaggtgcggc
      181 tccctccagg cacccggctg cggacggcgt tcctacttca gtgccagcac cagcgcgccg
      241 aggccaccgc cgacgagcca ggcgccgatg cgcttgagca gcggcaggtc caggccacgg
      301 gcgcggtcgg cggggctccg gttcagtccg agcacgaaga cgtgggccgg gacggcgatg
      361 aggccgagca cgcctacgac cagccagagc gaggccgagg gagaggtgtc gtgaaacagg
      421 ggccacagga agggccaggt gatggcggaa aagttgccgg ccaggaaggc cgaaacgggg
      481 gtggctttga acttcatggg aggcgtctct cggctgcgtt gcgtgggggc cacgggaccg
      541 gatggtgccc tcttccccgg cgctcctttt tacaggggtt tggggtgggc aacaaccggc
      601 ggaaagacat atcgcgccga gggcggcgct cccacagaag cgtcggggcc aagcctcagg
      661 ccggtgcggg tgcgggcggc ggggacgccg gctcctcgta ctcccgatcg aagaagaaat
      721 cccgctcctt cactaccacg acggctgcca gcaccagcag cagaccggtc tggatcacct
      781 tgctgtcggg gtgggtggcg aacatttcgt tgaacacccc ggcggtgatg tggaagacga
      841 tggcgaccag cacgctgcgg ttcgacttgt agtagagcca gttcatcagg atgacgaagg
      901 ggaagaggct caccaggaag ttgaggctgt agagcgctcc cgactcggcc acgttcgcgt
      961 ggtagtagtc cttgatgaag ccgaggggca ggtgccacag gccccagaag agggcgaaga
     1021 ggagtgatgc cttgagcagg ttcatgcgct ggcgcaggca gtcggtgccg taggagtgcc
     1081 aggcgagctc ctccaccagg ggcgccagga tgagcaggaa ccagcccggg aagagcccgg
     1141 cggagaagga ggactcgccc cgcagggtga actgatcggc gctgtaacca aaggcgaccg
     1201 aaaccgcctg agccagcagg atgctcccca gcatcaagaa acaggtgagg aagagataga
     1261 acggcttcac cccctggagg cccacgaggc ggcccatcag atcggcccgc atggagcggt
     1321 cgggccagat catccgcagg gcaatgaggg tgggcgccaa caggccgagg atgcccagga
     1381 gccccgcggc caaggccagc atcgggccag cgggcgtgag atggctcacc caggccgcgg
     1441 caaaccagaa ggcccagggg atggcggtgg cgaggccata gaaaacgaac ggatggcgat
     1501 atttctcgat ggtcatggcg cggtcactcg cagtgaggca gacgacaccc cgaaaatacc
     1561 cgaaaaccgc gccgccgctc gacaggatag accgtaacgt catgcagtgg acccgggacc
     1621 ggagatccga ggcctggata tttgggggtc agatgaacag ctcca
//
LOCUS       DATGWW010000265         1567 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_428863, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000265 DATGWW010000000
VERSION     DATGWW010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428863"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1293
                     /locus_tag="VK150_03900"
     CDS             <1..1293
                     /locus_tag="VK150_03900"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP30480.1"
                     /translation="ISLPLARKLTTSLLKAVDPFASRTRVLPEVPPRALEDYTRGAEL
                     MDRGDFKGAAPAFQAATQAAPDFAPAVLGYARCLNRLADMAPEPVFQWARWAARAQGY
                     RIYEMKALHHLSIRYGDRGQWEASDQAGREALDLAKTLGETAFEAGVHTTLGVNLQRQ
                     HRTPEAGAEYQQALAMYQAIGDKLNATRVLNNLAVIERGQGNLKGAEARLLGALETVQ
                     AYGDRWGESFITNNLGDLALAQEGGLDRAEGFFRKAQTLREANGDENGLAYTLMGLAS
                     VSQARGDLDRAEGLERQFLEQARKTRLRPLEALALYNLGELNRSALKFEAARGFYRQS
                     LALHQELKDAVMEAHCLAGEAECLAREGRRGMARALLDRTRMLSTDDTPYLLRAQAWL
                     ARTEGRTEEAKTLFAKALQEARVQAPEIVRELKEASAR"
     gene            complement(1307..>1567)
                     /locus_tag="VK150_03905"
     CDS             complement(1307..>1567)
                     /locus_tag="VK150_03905"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HLP30481.1"
                     /translation="GLSTTRFRDALETCEGVLEPGDRLVFYTDGLSEAQAPDDTFYGE
                     DRLEALLVNPMEDLQAAILGDVTAFIAGRPLADDLTLLILSR"
BASE COUNT          245 a          572 c          553 g          197 t
ORIGIN      
        1 atctccctgc ccctcgcgcg caagctcacc acttccctcc tcaaggcggt ggatcccttc
       61 gcctcccgga cccgcgtgct tcccgaggtg cccccccggg ccctggagga ctacacacgg
      121 ggcgccgagc tgatggaccg cggcgatttc aagggggcgg cgccggcctt ccaggcggcc
      181 acccaggccg cgcccgattt cgcccccgcg gtgctcggct acgcccgctg cctcaaccgc
      241 ctggccgaca tggcccccga gcccgtcttc cagtgggcgc gctgggcggc ccgggcgcag
      301 ggctaccgca tctacgagat gaaggccctc caccacctgt ccatccgcta cggcgaccgg
      361 ggccagtggg aggcgtccga ccaggccgga cgcgaagcgc tggacctggc gaagaccctg
      421 ggcgagacgg ccttcgaggc cggcgtgcac acgaccctgg gcgtgaacct ccagcggcag
      481 caccgcacgc ccgaggccgg ggccgaatac cagcaggccc tggccatgta ccaggccatc
      541 ggtgacaagc tgaacgccac gcgggtgctg aacaacctgg ccgtcatcga gcggggtcag
      601 ggcaacctga agggcgccga ggcccggctg ctcggggccc tcgagacggt gcaggcctac
      661 ggagaccgct ggggcgaatc cttcatcacc aacaacctgg gcgacctggc cctggcgcag
      721 gaaggcggcc tcgaccgcgc ggagggcttc ttccggaagg cccagaccct gcgggaagcc
      781 aacggggacg agaacggcct cgcctacacg ctgatgggcc tggccagcgt gtcccaggcc
      841 cggggcgacc tcgaccgggc cgaggggctc gagcggcagt tcctggagca ggcccgcaag
      901 acccgcctgc ggcccctgga agccctcgcc ctctacaacc tgggcgagct caaccgcagc
      961 gccctgaaat tcgaggcggc ccgcggtttc taccgccagt ccctggctct gcaccaggag
     1021 ctgaaggacg cggtgatgga ggcccactgc ctggccggcg aggccgagtg cctggcccgc
     1081 gaggggcgcc gcggcatggc ccgcgccctg ctcgaccgca cccgcatgct ctccacggac
     1141 gacacaccgt acctcctgcg ggcccaggcc tggctggccc ggaccgaggg ccggacggag
     1201 gaggcgaaga cgctgttcgc caaggccctc caggaagccc gggtgcaggc tccagagatc
     1261 gtgcgggagc tgaaggaggc ttcggcccgg taggccggaa gcgggttcag cggctgagga
     1321 tgagcagggt gaggtcgtcg gccaggggcc gcccggcgat gaaggccgtc acatccccga
     1381 ggatggcggc ctgcagatcc tccatcgggt tcaccagcag ggcctccagg cggtcttcgc
     1441 cgtagaaggt gtcatccggc gcctgggcct cggagaggcc atccgtgtag aacaccagcc
     1501 ggtctccggg ttcgaggacg ccttcgcagg tctccagcgc gtcccggaag cgcgtggtgc
     1561 tgaggcc
//
LOCUS       DATGWW010000266         1894 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_428902, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000266 DATGWW010000000
VERSION     DATGWW010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1894
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428902"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1237)
                     /locus_tag="VK150_03910"
     CDS             complement(<1..1237)
                     /locus_tag="VK150_03910"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HLP30482.1"
                     /translation="MRLYLLAILAAAASGIPGLFLRRKGGEVAVGLMGLAAALGLGAS
                     LRVLGGGPTAAFSLRTASLGSTGLMVLDPLAALFAVPVLLLAFCGALYGLGYWEGRRG
                     NTRALRLVYGLLIASLALLVTASHALTFLLGWEGMAIAAFLLVMAEDREPETRRAGWI
                     YLASTHTGTLILLGAFALLASTTGQYGFTALPAGLAGSRTGTALFVLFLLGFGFKAGV
                     LPLHYWLPPAHAAAPSHVSALMSGVLLKMGILGLARFLSWVPDPPLAWGGTLVALGAL
                     SGVLGVAFALGQHDLKRLLAYHSIENIGIILLGLGLGTLGKGMGQPVLQTLGYAGALL
                     HVVNHSLFKGLLFLSAGSVLHATGTRNLERLGGLGQRMPWTSGAFLVGAWAICGLPPL
                     NGFVSEWFIYLGAFRGLSLG"
     gene            complement(1234..>1894)
                     /locus_tag="VK150_03915"
     CDS             complement(1234..>1894)
                     /locus_tag="VK150_03915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30483.1"
                     /translation="FARCFGTLFLGQPRSAGADHAHDPASTMLLPMAILAALCLAIGL
                     GAFLLLPLLERAVAVVAQGAPPLLGLGLGRDLRLLAWVELGLLLFVAAGYRWLRRSAQ
                     EPEPLSLPTWDCGYAVPVPRAQYTGSSFADAWAPVQLGLRAQMPKLRGLFPGTASFRQ
                     VFREPIGEAFLEPRVAHLAERLLRFRRLQPGHLPVYIFYVLLCLLAVFLWMLLRERLL
                     G"
BASE COUNT          341 a          672 c          701 g          180 t
ORIGIN      
        1 gcccgaggct gagcccccgg aaggcgccca ggtagatgaa ccactcgctc acgaacccgt
       61 tgaggggcgg caggccgcag atggcccaag cgcccacgag gaaggccccg gaggtccagg
      121 gcatgcgctg gccgagcccg cccaggcgct ccaggttccg ggtgcccgtg gcgtgcagca
      181 ccgagcccgc cgacaggaac agcaggccct tgaagaggct gtggttgacc acgtggagca
      241 gggctccggc atagcccagg gtctgcagca ccggctggcc catccccttg cccagcgtcc
      301 cgaggccgag ccccagcagg atgatcccga tgttctcgat ggagtggtag gccagcaggc
      361 gcttcaggtc gtgctggccc agggcgaagg ccacgcccag cacgccggac agggcgccga
      421 gtgccaccag cgtgccgccc caggcgaggg gcgggtccgg cacccaggag aggaaccgcg
      481 ccagcccgag gatgcccatc ttgagcagca ctcccgacat cagcgccgag acgtggctgg
      541 gcgcggcggc gtgggccggc ggcagccagt agtgcagggg gaggacgccg gccttgaagc
      601 cgaagccgag gaggaagagc acgaagaggg ccgtccccgt gcggcttccg gcgaggcccg
      661 cgggcagcgc agtgaagccg tactgccccg tggtgctggc cagcagcgcg aaggccccga
      721 ggaggatcag ggtgccggtg tgggtggagg ccaggtagat ccatccggcg cgccgggtct
      781 caggttcccg gtcctccgcc atcaccagca ggaaggccgc gatggccatg ccctcccagc
      841 ccagcaggaa ggtcaacgca tgggaggctg tcaccagcag ggccagcgag gcgatcagga
      901 ggccatagac caggcgcagc gcccgggtgt tgccccgccg cccctcccag tagcccaggc
      961 cgtacagggc cccgcagaag gccagcagca gcaccggaac cgcgaagagg gccgccagcg
     1021 gatccagcac catcaggccc gtggatccca gcgaggccgt ccgcaggctg aaggcggcgg
     1081 tggggcctcc gccgagcacc cgcagggacg cgcccagtcc cagcgccgcg gccagaccca
     1141 tcagcccgac cgccacctcc ccgcccttcc gccgcaggaa gagccccggg attccggagg
     1201 ccgccgcggc gaggatggcg aggaggtaga gcctcatccc agcagccttt ctcgcagcag
     1261 catccagagg aacaccgcca ggaggcacag cagcacgtag aagatgtaga ccggcaggtg
     1321 gcccggctgc aggcggcgga accgcagcag ccgctccgcg aggtgggcga cccggggctc
     1381 caggaacgcc tcgccgatgg gttcgcggaa gacctggcgg aaggaggccg ttcccgggaa
     1441 cagcccgcgg agcttcggca tctgcgcccg cagccccagc tggaccggcg cccaggcatc
     1501 ggcgaaggaa ctgcccgtgt actgtgcccg tggcaccgga acggcgtacc cgcagtccca
     1561 ggtgggcagg ctgaggggct cgggctcctg cgccgaccgg cgaagccatc ggtaacccgc
     1621 ggccacgaag agcaggaggc ccagttccac ccaggcgagc aggcggaggt cgcggccgag
     1681 cccgaggccc agcagcggcg gcgccccctg cgccaccacc gcgaccgccc gctcaagcag
     1741 aggcagcagc aggaaggcgc ccaggccaat cgccaggcac aaggcggcga gtatcgccat
     1801 gggcagcagc atggtggagg ccgggtcgtg ggcgtggtcc gcgccggcgg accgcggctg
     1861 gcccagaaag agggtcccga agcaccgcgc gaag
//
LOCUS       DATGWW010000267         4384 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_428998, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000267 DATGWW010000000
VERSION     DATGWW010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4384
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428998"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..731)
                     /locus_tag="VK150_03920"
     CDS             complement(<1..731)
                     /locus_tag="VK150_03920"
                     /inference="COORDINATES: protein motif:HMM:NF013528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HLP30484.1"
                     /translation="MLDRFAAFLDCHAKVLLTTHENPDGDGVGAAIALAAHLRSRGKE
                     ARIVVTPSLPENLRFLDPEGWIEAYAPDGAHQDLAAWPDAWLLIDASEPHRMGALYRA
                     FEGTRAVRACLDHHLKDAPKGFDEEFTDATASASTELVYDLVRPRVGGDLPPVMAQAL
                     YAGLVSDTGNFRHSNTTPKVHHAAADLIAQGVHPARTFNALYQTATPAKLKLFGRAMG
                     GLQLRDGGRFAYVSVTQADLAACGAT"
     gene            complement(803..1111)
                     /locus_tag="VK150_03925"
     CDS             complement(803..1111)
                     /locus_tag="VK150_03925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30485.1"
                     /translation="MRSGRIVKKVSLKREKPDDEPQEILVFECVWSVKPMAPGVPLLG
                     DLEELSSLIERDAERAGLRRIDIVIYGPAYFDPVPVKDALVHRLQRRADGTWGPPGPA
                     "
     gene            complement(1250..1513)
                     /locus_tag="VK150_03930"
     CDS             complement(1250..1513)
                     /locus_tag="VK150_03930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30486.1"
                     /translation="MRDIAKIIRRTHAKNASIEVEIVRVPQAGQAHRVFWRFTRPPDS
                     RVIQVESPDGMCPFILGSSQGDARLVGTSIPEVVEIICSLLKH"
     gene            complement(1529..2596)
                     /gene="add"
                     /locus_tag="VK150_03935"
     CDS             complement(1529..2596)
                     /gene="add"
                     /locus_tag="VK150_03935"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: protein motif:HMM:NF013155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004000 - adenosine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0043101 - purine-containing compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HLP30487.1"
                     /translation="MAKLTLQDLQRLPKTDLHVHLDGSLRIPTILDLAEQQKVKLPAD
                     SVEGLRPFVEVGDDCKSLVEYLRAFDVTLSVMQTYESLVRTSFELAEDAAKENVRYLE
                     VRYSPILHQQKGLTLHAIVQAVLEGLGQAERKYNIKTGVILCGMRHISPDISLRLADL
                     TVAFKNKGVVGFDLAGAEENFPAKRHKDAFGRVLQNNINCTLHAGEAYGPESIHQAIH
                     LCGAHRIGHGVRLIEDGDLLNYVNDHRIPLECCPSSNVQTKAVKKMADHPIRLFYDLG
                     LRVTVNTDNRMVTGTTVSREFQVIHEELGFNLEEIKEVIIMGFKSAFLPYALKRALLA
                     EVVHELKAFKPGSLESKKEQL"
     gene            complement(2843..3346)
                     /locus_tag="VK150_03940"
     CDS             complement(2843..3346)
                     /locus_tag="VK150_03940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30488.1"
                     /translation="MHPLILIAAMGLAQAPAQTTPPPPPPPAGSPAATAPAPAPLSFF
                     TESYTFAWDRTIPLAINLDGLKVSSIFFNKRVVQPGFFNLFKGAEFGTRAQLEVTNTG
                     KYPKVPGFAVAVLDKDGRLIGVASGGTKVGTIKPGETETFDLNFTQVKERLAFGDRFL
                     LAIELRN"
     gene            complement(3348..>4384)
                     /locus_tag="VK150_03945"
     CDS             complement(3348..>4384)
                     /locus_tag="VK150_03945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30489.1"
                     /translation="VSDLVQRLLADASPADLDEAPIAGTASFSTQDLDAARALSLGAD
                     APSLTLGDLEGVDAEILEKTLIDTPAFLPEAKAVATPEPVPAATPADAAPPAFPPEIT
                     DSTLSGYTSARDAIEKLFGAAPAQGGLKVNQDADAMDMEATLHALESTLGGVPAPTPA
                     SLPAAAPGDGPTDAGHAMDDLSGLDSADPTSSTMRLTQDDLAAVLAATPKAAPKPAEP
                     TVALRASDLLAAHQEKPTPAGRPFASEPDQPEGGSELLRLKVGEEVYSNLTMPQLIAW
                     VGEGRILETHLVARQHSENWLEAHKVPGLRPVFERLRRERSGSAPSLDSGIGEIAPKK
                     SLFGGLFGKG"
BASE COUNT          677 a         1378 c         1601 g          728 t
ORIGIN      
        1 gtggccccgc aggccgcgag gtccgcctgg gtgaccgaga cgtaggcgaa ccggccgccg
       61 tcccgcaact gcaaaccgcc catggcccgg ccgaagagct tcagcttggc cggggtggcg
      121 gtctggtaga gggcattgaa cgtccgggcc ggatgcacgc cctgggcgat gaggtcggcc
      181 gcggcgtggt ggaccttcgg cgtggtgttc gaatgccgga agttgcccgt gtcgctcact
      241 agccccgcat agagggcctg ggccatgacg ggcggcagat cgccgccgac gcggggccgc
      301 accagatcgt agaccagctc cgtgctggcg ctggcggtgg catcggtgaa ctcctcgtcg
      361 aaccccttcg gcgcatcctt caggtggtga tccaggcagg cccgcacggc ccgggtcccc
      421 tcgaaggccc tgtagagggc ccccatgcgg tggggctcgg aggcgtcgat gagcagccag
      481 gcatcgggcc aggcggcgag gtcctggtgg gcgccgtcgg gcgcgtaggc ctcgatccac
      541 ccttcgggat cgaggaagcg caggttctcc ggcagggaag gcgtgaccac gatgcgcgcc
      601 tctttgccgc ggctccgcag gtgggcggcg agggcgatgg cggcccccac cccatcacca
      661 tccgggttct catgggtggt gagaagcacc ttggcgtgac agtcgagaaa ggcggcaaag
      721 cgatccagca tgaatcctga cctcgacagt caggataaca ggccggggcc ggccccgcgg
      781 agctgggatg cgccatggac ggctaggcag gcccaggtgg accccaggtc ccgtcggccc
      841 tccgctggag acggtggacc agggcgtcct tcaccggcac ggggtcgaag tacgctgggc
      901 cgtagatgac gatgtcgatc ctgcggagcc cggcccgttc cgcgtcccgc tcgatgaggc
      961 tcgacagctc ctcgaggtcg cccagcaggg gcacccccgg cgccatgggc ttgaccgacc
     1021 agacgcactc gaacaccagg atctcctggg gctcgtcgtc gggcttttcc cgcttgagcg
     1081 acaccttctt gacgatcctc ccggacctca accgggtctc ctgcgggacc agggatccgt
     1141 cgcaccccat gaaggccagc agaacgaggc atcccagata gcgtctattc agcatcgttg
     1201 gaggcctgtg gatcaagcgg atgggggaac gcggccaagc ccgccctggc tagtgcttca
     1261 gcaggctgca gatgatttcg acgacttccg gaatggaggt tccgaccagg cgcgcgtcgc
     1321 cctggctgga tccaaggatg aagggacaca ttccgtccgg tgactccacc tggatgaccc
     1381 gggagtccgg cggccgcgtg aatcgccaga acacccgatg ggcctgcccg gcctggggca
     1441 cccgcacgat ctccacttcg atggaagcgt tcttcgcgtg cgtgcgacgg atgatcttgg
     1501 cgatgtcgcg catggggcca tacggacctt acaactgttc ctttttgctt tccaggctgc
     1561 cgggcttgaa ggccttcagt tcgtgcacca cctcggccag cagggcccgc ttcagggcat
     1621 agggcaggaa ggcgctcttg aagcccatga tgatgacttc cttgatctcc tcgaggttga
     1681 agcccagctc ttcgtggatg acctggaatt cccggctcac ggtggtcccc gtcaccatgc
     1741 ggttgtccgt gttcacggtg acccgcaggc ccaggtcgta gaagaggcgg atggggtggt
     1801 cggccatctt cttcacggcc ttggtctgca cgttgctcga ggggcagcac tccagcggaa
     1861 tgcggtgatc gttcacgtag ttcagcaggt cgccatcctc gatgaggcgc acgccgtggc
     1921 cgatgcggtg ggccccgcag aggtggatgg cctggtggat gctctcggga ccgtaggcct
     1981 cgcccgcatg cagggtgcag ttgatgttgt tctgcagcac gcggccaaag gcgtccttgt
     2041 ggcgcttggc gggaaagttc tcctcggcgc cggccaggtc gaagcccacc acgcccttgt
     2101 tcttgaacgc caccgtgagg tcggccagcc gcagggagat gtccggggag atgtggcgca
     2161 tgccgcagag gatcacgccg gtcttgatgt tgtacttgcg ctcggcctgg ccgagtccct
     2221 ccagcaccgc ctgcacaatg gcgtgcaggg tgagcccctt ctgctggtgg aggatggggc
     2281 tgtagcgcac ctccaggtag cgcacgttct ccttggcggc gtcctccgcc agttcgaagg
     2341 aggtgcggac caggctctcg taggtctgca tcaccgagag cgtcacgtcg aaggcgcgga
     2401 ggtactccac cagcgacttg cagtcatcgc ccacctcgac gaagggacgc agcccctcca
     2461 ctgaatccgc cggcagcttc accttctgct gctcggccag atcaaggatg gtgggaatcc
     2521 gcaggctgcc gtccaggtgg acatgcagat cggtcttggg aaggcgttgg aggtcttgga
     2581 gggtcagttt ggccatggcc tagcctagcg ccatgcgccg ccccgggcta cgaaaggcga
     2641 tccccccatc gcctggaccc gccgcgcagc ctagcccccc tggagagcat ccagcgaggc
     2701 acggctccgc cgggccgagc gaggggtccg ggggtgtgcg cgaagcgcag aacccccgga
     2761 gaacatccag cgaggcacgg ctccgccggg ccgagcgagg gggtccgggg gtgtgcgcga
     2821 agcgcggaac ccccggagaa catcaattcc tgagttcgat ggcgagcagg aaccggtcgc
     2881 cgaaggcgag gcgctccttc acctgggtga agttgaggtc gaaggtctcg gtttcgccgg
     2941 gcttgatggt gcccaccttg gtgccgccgc tggccacgcc gatgagccga ccgtccttgt
     3001 cgagcaccgc cacggcgaaa cccggcacct tgggatactt gcctgtgttg gtgacctcga
     3061 gctgggcccg ggtgccgaat tcagccccct tgaacaggtt gaagaacccg ggctggacca
     3121 cgcgtttgtt gaagaagatg ctgctcacct tcaagccgtc gaggttgatg gcgaggggga
     3181 tggtgcggtc ccacgcgaag gtgtagctct cggtgaaaaa ggacaatggc gccggcgcgg
     3241 gggctgtggc cgctggcgag cctgcggggg ggggcggcgg aggcggagtg gtctgggcgg
     3301 gcgcctgggc gaggcccatg gccgcgatga ggatgagtgg gtgcatgtca gccttttccg
     3361 aacaggccgc cgaagaggct cttcttcggg gcgatctcgc cgatgccaga atccaggctg
     3421 ggcgcgctgc cgctgcgctc acggcgcaga cgttcgaaca cgggccgaag tccgggcacc
     3481 ttgtgggcct ccagccagtt ctcgctgtgc tgccgggcca ccaaatgggt ctcgaggatg
     3541 cggccctcgc ccacccaggc gatgagctgg ggcatggtga ggttgctgta gacctcttcg
     3601 ccgaccttca ggcggagcaa ctccgaaccc ccctcgggct ggtcgggttc ggaggcgaag
     3661 ggccggcccg cgggagtagg cttttcctga tgggcggcca gcaggtcgga ggcccgcagg
     3721 gccacggtgg gttccgcggg cttgggggcg gccttgggcg tggcggccag caccgcggcc
     3781 aggtcgtcct gggtcaggcg catggtggag gaggtgggat cggccgagtc caaccccgaa
     3841 aggtcatcca tggcgtggcc ggcgtccgtg gggccgtctc ccggcgcggc ggctggcagc
     3901 gatgcaggcg tgggggcggg cacgccgccc agggtggact ccagggcgtg cagggtcgct
     3961 tccatgtcca tggcatcggc gtcctggttc accttcaggc cgccctgggc gggggcggcg
     4021 ccgaagagct tctcgatggc gtcccgggcc gaggtgtagc cagaaagggt ggaatcggtg
     4081 atctcagggg ggaaggcagg gggtgccgcg tcggccggag ttgctgccgg caccggctcc
     4141 ggcgtggcca ccgccttggc ctcggggagg aaggccgggg tgtcgatgag ggtcttctcg
     4201 aggatctccg cgtccacccc ctcaaggtcg cccagggtca gggagggcgc gtcggcgccg
     4261 agggagaggg cgcgggcggc atccaggtcc tgggtgctga agctggccgt gccggcgatg
     4321 ggggcctcgt cgagatccgc aggcgaggcg tccgccaaga ggcgctggac cagatcactc
     4381 accg
//
LOCUS       DATGWW010000268         2916 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_20531, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000268 DATGWW010000000
VERSION     DATGWW010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2916
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20531"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1345
                     /locus_tag="VK150_03950"
     CDS             <1..1345
                     /locus_tag="VK150_03950"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HLP30490.1"
                     /translation="IGLLALPLGWTLRRILKSIRRGFRRDFASTRDIVLSAVREPRKR
                     FSEESLLKSLKRSLGEAFRPQFLVILPIEERQVMLPAAEASDRDERRVHFPPQPLRLP
                     QGLLRLARDNRELVLGLGSEEADWVRDQGGTVRAHLDALEAQLLLLILAGDDPHSVVL
                     LGGKYSELNYGREDRELLREAALAAGQVLETAVMHQRLLAQERLSQELETARRIQEGL
                     VTSHVPPIPGFQVALRLEPAMETGGDLLFVKRRPGGTWLAAVGDVCGKGLAAALYMAQ
                     ATALLEQAAQREDQSLEQMLCSLDQTLRQLLGHRGFLTLILLEWDDAGNYRLARAGHP
                     GALMLQGHTEQGSSEVIPHGRGLGLRPAGPGDWQVVEGVLPPKGWMVLYSDGLSEAMN
                     REGELYGLGRLDAQLRRLWGTGSPRAACEAVFNDVATFDTQNRDDRTLFILGREA"
     gene            1345..1842
                     /locus_tag="VK150_03955"
     CDS             1345..1842
                     /locus_tag="VK150_03955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30491.1"
                     /translation="MRRSSLRWTIPAFLALQLGLLWIQGAQLHRQNQVLQGLREDIQA
                     LTESLDAGQGPLSNEDEGAAVPAGFLPKGQAPAQKKMAVLGVQEEQEAAAKELQASRE
                     SAEKAVKDAKEVRSKLSIEENARKAEEARKVQAATSSWQRWAGWAVALVALALLARAI
                     LRRRG"
     gene            1842..2639
                     /locus_tag="VK150_03960"
     CDS             1842..2639
                     /locus_tag="VK150_03960"
                     /inference="COORDINATES: protein motif:HMM:NF024762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HLP30492.1"
                     /translation="MSLLDYLREDPGCRELAEGAVHAVAPALDDPDPVPVSMQLNDWA
                     YQLAGRMPLPWNTHKAIDALNHLLFVEIGFAGDRDTYDDPLNALLPAVIARRKGLPIT
                     LSILWVDLARRMGFDAVGVSLPGHFIAALRTDMGLLCFDPFHGGRAVGEEGGAALVAS
                     ATAGRVAFHRNMLRPATGRETLIRLVRNLHLRFLHAEDWEEALWTATHLILLQPENPR
                     FHKERAFVHLQREEPAPALADLREALRLSADPDPEIQAWLLQLGTSG"
     gene            complement(2688..>2916)
                     /locus_tag="VK150_03965"
     CDS             complement(2688..>2916)
                     /locus_tag="VK150_03965"
                     /inference="COORDINATES: protein motif:HMM:NF013665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HLP30493.1"
                     /translation="PWVDLPGGPNVLIFPDLTSGNIGYKLVQRLAGAEVIGPITCGMA
                     APVHVLQRHSDLNDIIHLTALTVVEAQQRKA"
BASE COUNT          419 a         1080 c         1009 g          408 t
ORIGIN      
        1 gatcggcctg ctggccctgc ccctcgggtg gaccctgcgc cgcatcctga agagcatccg
       61 gcgcggcttc cggcgggact tcgccagcac ccgggacatc gtcctgagtg ccgtgcgcga
      121 accccgcaag cgcttcagcg aggagtccct gctcaagtcg ctcaagcggt cgctgggtga
      181 ggccttccgg ccccagttcc tggtcatcct gcccatcgag gagcgccagg tgatgctgcc
      241 cgcggcggag gcctccgacc gcgatgagcg gcgggtccac ttcccccccc agcccctccg
      301 cctgccccag ggcctgctcc gcctggcccg cgacaaccgc gaactggtat tgggcctggg
      361 cagcgaggag gccgactggg tgcgcgacca gggcggcacc gtgcgggccc acctggatgc
      421 cctggaagcc cagctcctcc tgctcatcct ggccggcgac gatccccaca gcgtggtgct
      481 gctgggcggc aaatactcgg aactgaacta tggccgcgag gaccgcgaac tgctgcgcga
      541 ggcggccctg gcggccggcc aggtgctgga gacggcggtg atgcaccagc gcctgctcgc
      601 ccaggagcgc ctcagccagg agctcgaaac ggcccggcgc atccaggagg gcctggtcac
      661 ctcgcacgtg ccccccatcc caggcttcca ggtggccctg cgcctcgagc ccgcgatgga
      721 gaccggcggc gacctgctgt tcgtgaagcg ccgccccggc ggcacctggc tggccgccgt
      781 gggcgatgtc tgcggcaagg gcctcgccgc ggccctctac atggcccagg ccaccgcgct
      841 cctcgaacag gcggcccagc gggaggacca gagcctggag cagatgctct gctcgctgga
      901 tcagaccctg cggcagctgc tcggccaccg gggcttcctc accctcatcc tgctggagtg
      961 ggatgacgct gggaactacc ggctggcccg ggccggccac cccggcgccc tcatgctgca
     1021 ggggcacacc gagcagggct ccagcgaggt catcccccat ggccgcggcc tgggcctgcg
     1081 gcccgcgggc ccaggcgact ggcaggtggt ggagggcgtg ctcccgccga agggctggat
     1141 ggtcctctac agcgacggcc tgtccgaggc catgaatcgc gagggcgagc tctacggcct
     1201 gggccgcctc gacgcccagc tgcggcgcct ctggggcacc ggcagccccc gggccgcctg
     1261 cgaggccgtc ttcaacgacg tggccacctt cgatacccag aaccgcgacg accggaccct
     1321 gtttatcctg gggagggagg cctgatgcgc cgttcttccc tccgatggac cattcccgct
     1381 ttcctggccc tccagctggg gctcctctgg atccaggggg cccagctgca ccgccagaac
     1441 caggtgctgc agggtctccg cgaggacatc caggccctca ccgaatccct cgacgccggc
     1501 caggggccgc tctccaacga ggacgagggc gcggcggtgc ccgctggctt cctccccaag
     1561 ggccaggccc cggcccagaa gaagatggcc gtcctcggcg tgcaggagga acaggaggcc
     1621 gccgcgaagg agctgcaggc ttccagggaa tccgccgaga aggcggtgaa ggacgcaaaa
     1681 gaggtgcgct ccaagctctc catcgaggag aacgcccgca aggctgaaga agcccggaag
     1741 gtccaggccg cgacgagcag ctggcagcgc tgggccggct gggcggtggc gctggtggcc
     1801 ctggccctcc tggcgagggc gatcctccgc cggcgcggct gatgtccctg ctggactacc
     1861 tccgggagga tcccgggtgc cgggaactgg ccgaaggggc cgtccacgca gtggcgccgg
     1921 ccctggatga tcctgacccc gtgccggtct ccatgcagct caacgactgg gcctaccagc
     1981 tggccggacg catgcccctg ccctggaaca cccacaaggc catcgacgcc ctgaaccatc
     2041 tcctcttcgt ggagataggc ttcgcgggcg accgcgacac gtacgacgac ccgctcaacg
     2101 ccctgctacc cgccgtcatc gcccggcgca agggcctgcc catcacgctg tccatcctct
     2161 gggtggatct ggcccgccgc atgggcttcg atgccgtggg cgtgagcctg cccggccact
     2221 tcatcgccgc gctacgcacg gacatgggcc tgctctgctt cgaccccttc cacgggggcc
     2281 gggccgtggg cgaggaaggg ggcgcggcgc tggtggcctc cgccacggcg gggcgggtgg
     2341 ccttccaccg gaacatgctc cggccggcca cgggccggga gaccctcatc cgcctggtgc
     2401 ggaacctcca cctccgcttc ctgcacgctg aggactggga ggaggcgctc tggaccgcca
     2461 cccacctgat cctcctccag cccgagaacc cgcgcttcca caaggagcgt gccttcgtgc
     2521 acctgcagcg ggaggagcca gcccccgccc tcgccgacct gcgcgaggcc ctgcgcctga
     2581 gcgccgaccc ggatccggag atccaggcct ggctgctgca gctgggaacg tccggctaga
     2641 cagacagcgg gggccgatcg gcccccgctg cgtggtgctg acgccgatca ggccttgcgc
     2701 tgctgcgcct ccacgaccgt gagggccgtg aggtggatga tgtcgttcag gtcgctgtgc
     2761 cgctgcagca catggaccgg ggccgccatc ccgcaggtga tggggccgat gacctcggcg
     2821 cccgcgagcc gctgcaccag cttgtagccg atgttgccgc tggtgaggtc ggggaagatc
     2881 agcacgttcg ggccgcccgg caggtccacc cagggg
//
LOCUS       DATGWW010000269         1980 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_333210, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000269 DATGWW010000000
VERSION     DATGWW010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333210"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            149..520
                     /locus_tag="VK150_03970"
     CDS             149..520
                     /locus_tag="VK150_03970"
                     /inference="COORDINATES: protein motif:HMM:NF018021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase family protein"
                     /protein_id="HLP30494.1"
                     /translation="MHVSDRAFRRLVEEALALVPGEFRPYLEGVPVIIEDWAPDDLLD
                     DLGVPEDDTLYGLYSGRALTEGPPEPGDLPPRITLYRGPLLEDCVDEEDLRGEIATTV
                     IHEIAHHFGIDEARLEELGWG"
     gene            complement(530..1321)
                     /locus_tag="VK150_03975"
     CDS             complement(530..1321)
                     /locus_tag="VK150_03975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SHOCT domain-containing protein"
                     /protein_id="HLP30495.1"
                     /translation="MRHKDWMIPAMMLTLALAGGLPACAGEPDQTQWKLANFTWVKRV
                     PAEAGAEPSTHPAPLTEAALVEVLGSVKLLSDGQEAPLFEQAEVKGLAKALSEAFALA
                     RPGEDLVLLSTSRRGGGFMDPALGLTARLFVREGALNLLVHDARLDFMGRYSADRTLP
                     DFAYGARKAASAVKLQAPGARALRGDWLALPLAAPGTATTPATTPAAAPVPVSATQPT
                     PPGLRDPAFYEAQIQKLRALKQLRDENLITEAEYKEKRGAILKTF"
     gene            1453..>1980
                     /locus_tag="VK150_03980"
     CDS             1453..>1980
                     /locus_tag="VK150_03980"
                     /inference="COORDINATES: protein motif:HMM:NF010621.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HLP30496.1"
                     /translation="MANRFWTTFKGTFASSVLAANAVTIFSGMIPVALVKLALPFGAV
                     RRGADRILNALAEGWIAVNGWWMAAVQRIRWDVAGLEGLRRRGWYLVSSNHQSWVDIL
                     VLQKVFHRRVPFLKFFLKRQLLYVPVMGLAWWALDFPFMKRRSGSRTADLATARKACE
                     KFREIPTSVMNFLEGT"
BASE COUNT          284 a          631 c          756 g          309 t
ORIGIN      
        1 ggtggagcgc gccgagggcc gcgaaggtgg cgatgagcat cgcaggaagc atgggcggtc
       61 actccagaag ccgggctgga agcatcctcc cagtcgggat gagtctggac aagggcggcg
      121 cccccgggga agggagtaac ctcatcccat gcacgtgtcc gaccgcgcgt ttcgcagact
      181 ggtggaggag gcgctggccc tcgttcccgg ggagttccgg ccctacctcg aaggcgtccc
      241 cgtgatcatc gaggactggg cgccggacga tctgctcgac gacctgggcg tgcccgagga
      301 cgacacgctc tacgggctct attcgggccg ggcgctcacg gagggccccc cggagccggg
      361 ggatctgccg cctcgcatca cgctctaccg cgggccgctg ttggaggact gcgtggacga
      421 ggaggacctc cgcggggaga tcgccacgac ggtcatccac gagatcgccc accacttcgg
      481 catcgacgag gcgcgcctgg aggagctggg ctggggctga agtgcgcggc tagaacgtct
      541 tcaggatggc gccgcgcttt tccttgtact cggcttccgt gatcaggttc tcgtcgcgga
      601 gctgcttgag cgcgcgcagc ttctggatct gcgcctcgta gaaggcggga tcccgcaggc
      661 ccggcggagt gggctgggtg gccgagacgg gaaccggggc cgccgccggg gtggtggctg
      721 gcgtggtggc tgtgccgggc gcggcgaggg gcagggccag ccagtcgccg cggagcgcgc
      781 gggcgccggg ggcctggagc ttcacggccg aggcggcctt gcgggcgccg taggcgaagt
      841 cgggcagggt gcggtccgcg gaatagcggc ccatgaaatc gaggcgcgcg tcatggacca
      901 ggaggttcag ggcgccctcg cgcacgaaga ggcgggccgt gaggcccagg gcgggatcca
      961 tgaagccccc gccccgccgg gaggtgctga ggagcaccag gtcttcgccg ggccgcgcca
     1021 gggcgaaggc ttccgagagg gccttggcga gccccttcac ctcggcctgc tcgaacagcg
     1081 gggcctcctg gccatccgac aggagtttca cggaaccgag aacctccacc agggcggctt
     1141 ccgtcagggg ggccgggtgg gtactcggct cggcgccggc ctcggcgggc acgcgcttca
     1201 cccaggtgaa gttggcgagc ttccactgcg tctggtccgg ttcgccggcg caggccggaa
     1261 ggcctccggc cagggcgagc gtcagcatca tggccggaat catccaatcc ttgtgtcgca
     1321 tgcggtcttc cccgtggcag ctatccccat caggataccc gcaccgatgg gtaaggaatt
     1381 cccgtgcggg ggggccgggc aggctggcta tgctggtcga tccggcccgg cgggccgttc
     1441 cgggggcagg ccttggccaa tcgattctgg acgaccttca agggcacctt cgccagctcg
     1501 gtgctggcgg cgaacgccgt gaccattttc tcgggcatga tcccggtggc cctcgtgaag
     1561 ctggccctcc cctttggcgc cgtgcggcgg ggggccgacc ggatcctcaa cgccctggcc
     1621 gaggggtgga tcgccgtgaa cggctggtgg atggccgcgg tgcagcgcat ccgctgggac
     1681 gtggcgggac tggagggcct gcggcgccgg gggtggtacc tggtgagcag caaccaccag
     1741 agctgggtgg acatcctggt gcttcaaaaa gtgttccacc gccgggtgcc cttcctgaag
     1801 ttcttcctca agcgccagct gctctacgtg ccggtcatgg ggctcgcctg gtgggccctg
     1861 gatttcccgt tcatgaagcg gcggagcggc agccgcacgg cggatctggc cacggcgcgg
     1921 aaggcctgcg agaagttccg cgagattccc acctcggtga tgaacttcct ggaggggacc
//
LOCUS       DATGWW010000270         3475 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_146073, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000270 DATGWW010000000
VERSION     DATGWW010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3475
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146073"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..565)
                     /locus_tag="VK150_03985"
     CDS             complement(<1..565)
                     /locus_tag="VK150_03985"
                     /inference="COORDINATES: protein motif:HMM:NF016240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceH family protein"
                     /protein_id="HLP30497.1"
                     /translation="MADLDLTPLECRVLGCLLEKQLSTPDVYPLSMNALLNACNQSSN
                     REPVLALAEAEVQEAVTALMNRGLAEHWPGRVLKVAHTAKPTWNLSVQEGALLAELLV
                     RGPQTPGELRTNTRRMYAFPDLAEVEACLSVLMEAEPPLVVRLAKAPGAREARVAHLL
                     SGPVDPGGPAQEPPLANRPGRADRVEQL"
     gene            complement(569..1345)
                     /locus_tag="VK150_03990"
     CDS             complement(569..1345)
                     /locus_tag="VK150_03990"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF017501.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990107 - thiazole synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HLP30498.1"
                     /translation="MSLVIAGKSFSNRLVLGTGKYKDFATMQACYRAARVEMVTLAVR
                     RFDLEAKGEDNILNWIPKDIALLPNTAGCYTREDALRVARLAREALQTDWVKLEVIGD
                     PKSLYPDNEETLEAAKILVKEGFVVLPYVNADPILAKKLCDAGCAAVMPLGSAIGSGL
                     GVQNPMTLLLIKDVVAGYGLPMIVDAGVGTASDAALAMELGADGVLLNTAVAEAGEPT
                     KMALAMDFAVQAGRLAFESGRMPKRLYASASSPMAGVVGS"
     gene            complement(1426..2088)
                     /locus_tag="VK150_03995"
     CDS             complement(1426..2088)
                     /locus_tag="VK150_03995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30499.1"
                     /translation="MRTILAVLLVVLGGLGCARIYRPVVLVAPVPATHGTGLSGVAAL
                     QPWGDNGRYERKALQAHLRVIVLTLENTSSGDLEVLRLEWPDATSPLTPEAATTAIKQ
                     NSLAYLLYPLVPGLLSLSGEKHSGYGPSDKMVFGGLAIVGLCIGAPNAIIAARSNHRL
                     GAFFADQAWRPGPLRPGQVRRGLLFVRSRDPFEPLPIQVVYILPDGERRLTLLCPGVR
                     PL"
     gene            complement(2113..2595)
                     /locus_tag="VK150_04000"
     CDS             complement(2113..2595)
                     /locus_tag="VK150_04000"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HLP30500.1"
                     /translation="MDPLALTSEALREPWRLWTGHLVHFGWEHSLANLVALAAPLLLA
                     GRHDRRRVAFLLLVGAPLLGLLLLPSLGGADYRGASGLACGLWALVGLRLAGRGESAP
                     VGLLMLGGLGLKLGLEAALGSCFLLHPEGWRTLPAAHLWGSLLGLILALPPWPRHRTA
                     "
     gene            complement(2595..>3475)
                     /gene="rhlP"
                     /locus_tag="VK150_04005"
     CDS             complement(2595..>3475)
                     /gene="rhlP"
                     /locus_tag="VK150_04005"
                     /inference="COORDINATES: protein motif:HMM:TIGR04179.1"
                     /note="RhlP (RHombo-target LipoProtein) is a family of
                     predicted lipoproteins that, in general, co-occurs with a
                     form of rhombosortase, and that has an apparent cleavage
                     site for that enzyme, a GlyGly motif, near the C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rhombotarget lipoprotein"
                     /protein_id="HLP30501.1"
                     /translation="EPPMPRLPRLALLGAALTLLAALGCNRPETHTRRSSLMDYLYPK
                     QKAAPNPNPAGARLKLPLKLGIAFVPGASNSWRVQGLLAPGQEKPLLDVVKQSFKDKP
                     WVSEIKLVPSTYLRPGGGFENMDQVARMYGVDVMALVSVDQIQYTDPRWYSFTYLSIV
                     GAYVLPGDANDTRTLIDAAAYDVASHTFLLRAPGQSQVKGSSTWAHREVQLRDHAQKG
                     LQLAMADLAKNLDAEVASFKAEVASGDRKDVDVVDRQGVSLRQSGGRNFGGSFGWLEA
                     LGSVLLLGAALRLRRA"
BASE COUNT          519 a         1157 c         1309 g          490 t
ORIGIN      
        1 ccagctgctc gacgcggtct gcgcgacctg ggcggttggc cagcggcggc tcctgggccg
       61 ggccgcccgg atccaccggg cccgagagca ggtgggcgac ccgggcctcc cgcgccccgg
      121 gtgctttggc caggcggacc accaggggcg gctcggcctc catgagcacc gagaggcagg
      181 cctccacttc ggcgagatcg gggaaggcgt acatgcgccg ggtgttggtg cgcagctcgc
      241 caggggtctg aggcccccgg accagcagct cggcgagcag ggcgccttcc tgcacggaga
      301 ggttccaggt gggtttcgcg gtgtgggcca ccttcagcac ccggccgggc cagtgttccg
      361 ctaggccccg gttcatcagg gcggtcaccg cctcctggac ctccgcctcg gccagggcga
      421 gcacgggttc gcggttgctg gactggttgc aggcgttgag cagggcgttc atggacaggg
      481 gatacacgtc cggggtgctc agctgcttct ccagcaggca gcccaggacc cggcattcca
      541 ggggggtgag gtcgaggtcg gccacaggct agcttccgac gacgcccgcc atggggctgc
      601 tggcgctggc gtagaggcgc ttgggcatgc ggccgctctc gaaggccagg cgtcccgcct
      661 gcacggcgaa gtccatggcc agggccatct tcgtgggctc gccggcctcg gccacggcgg
      721 tgttcagcag cacgccgtcg gcgcccagct ccatggccag ggccgcgtcg gaggcggtgc
      781 ccacgccggc atccacgatc atgggcagcc cgtagcctgc caccacgtcc ttgatgagca
      841 ggagggtcat ggggttctgc acgcccaggc ccgagccgat ggcgctgccc aggggcatga
      901 cggcggcaca gcccgcgtcg cagagcttct tggcgaggat ggggtcggcg ttcacgtagg
      961 gcagcacgac gaagccctcc ttcacgagga tcttcgcggc ttccagcgtc tcctcgttgt
     1021 cgggatagag cgacttcgga tcgccgatga cttccagctt cacccagtcg gtctgcaggg
     1081 cctcacgggc caatcttgct acgcgtaacg catcctcgcg ggtgtagcag ccggcggtgt
     1141 tgggcagcag ggcgatgtcc ttggggatcc agttcaggat gttgtcctcg cccttggcct
     1201 ccaggtcgaa gcggcgcacc gccagggtga ccatctccac ccgggcggcg cggtagcagg
     1261 cctgcatggt ggcgaagtcc ttgtacttcc ccgtgcccag gacgaggcgg ttgctgaagc
     1321 tcttgccggc gatgacgagg gacatggggc gctccgaagc accagtctag ctccggtggg
     1381 caagagggag gatgaccctg gaaacggaca gggaccgccg caggctcaga ggggccggac
     1441 cccggggcag aggagggtca gccgccgctc gccgtccgga aggatgtaga ccacctggat
     1501 gggcagcggc tcgaagggat cccggctgcg cacgaacagc agcccgcggc ggacctgtcc
     1561 gggccgcagg ggccccgggc gccaggcctg gtccgcgaag aaggcgccca ggcggtggtt
     1621 gctgcgcgcg gcgatgatgg cgttgggcgc gccgatgcac aggccgacaa tggccaggcc
     1681 cccgaagacc attttgtccg aggggccgta tccgctatgt ttctcgccgc tcagggatag
     1741 cagcccgggc accaggggat aaagcaggta ggcgaggctg ttctgcttga tggccgtggt
     1801 ggcggcctcg ggggtcaggg ggctcgtcgc gtcgggccac tccagccgga ggacctccag
     1861 gtcgccgctg gaggtgttct ccagggtcag gacgatcacc cggaggtggg cctggagcgc
     1921 cttgcgctcg taccgcccgt tgtcgcccca gggctggagc gccgcgacgc ccgaaagtcc
     1981 cgtcccgtgg gtggcgggga ccggggccac caggaccacc gggcggtaga tccgggcgca
     2041 gccgagaccg ccgaggacga ccaaaagcac ggcgaggatg gttcgcatgc gtcctcccgg
     2101 gagggctgcc cgtcaggcgg tgcggtggcg cggccagggg ggaagggcga ggatcaggcc
     2161 gagcagggag ccccagaggt gggcggcggg cagggtccgc cagccctcgg ggtgcagcag
     2221 gaagcagctg cccaacgcgg cttcgaggcc cagtttcagt cccagcccgc ccagcatcaa
     2281 cagaccgacc ggtgcggatt ccccgcggcc cgcgagccgc aggcccacca gggcccagag
     2341 cccgcaggcg agccccgagg cgccgcggta gtcggccccg cccagggagg gcagcagcag
     2401 caggccgagg aggggcgcgc ccaccagcag caggaaggcg acccggcgcc ggtcgtggcg
     2461 gccggccagc agcagcggcg cggccagagc cacgaggttg gccaggctgt gctcccagcc
     2521 gaaatgcacc aggtggccag tccagaggcg ccagggctcc cgcagggcct ccgaggtgag
     2581 ggcgaggggg tccatcaggc ccgccgcagc cgcagggcgg cgccaaggag cagcaccgaa
     2641 cccagggcct ccagccagcc gaagctgccg ccgaagttgc ggccgccgct ctggcgcaac
     2701 gacacgccct ggcggtccac cacgtccacg tccttgcggt cgccgctggc gacctcggcc
     2761 ttgaagctgg ccacctcggc gtcgaggttc ttggccaagt cggccatggc cagctgcagg
     2821 cccttctggg cgtggtcgcg cagctgcacc tcccggtgcg cccaggtgga gctgcccttc
     2881 acctggctct ggcccggcgc ccgcagcagg aacgtgtggc tggccacgtc gtaggccgcc
     2941 gcgtcgatga gggtgcgggt gtcgttggcg tcaccgggaa gcacgtaggc ccccacgatg
     3001 gagaggtagg tgaagctgta ccagcggggg tccgtgtact ggatctgatc cacgctcacc
     3061 agggccatga cgtccacgcc gtacatcctc gccacctgat ccatgttctc gaagccgccg
     3121 cccggacgca ggtaggtgct gggcacgagc ttgatctccg agacccaggg cttgtccttg
     3181 aagctctgct tcaccacgtc aagcaggggc ttctcctggc ccggcgcgag caggccctgc
     3241 acccgccaag agttcgaagc gcctggcacg aaggcgatgc cgagcttcag gggcagcttg
     3301 agacgcgcgc cagcgggatt ggggttcggc gccgccttct gtttgggata gaggtagtcc
     3361 atcaggctgc tgcggcgggt gtgggtctcg ggcctgttgc aacccagggc ggccagcagg
     3421 gtgagggcgg cgccgagcag ggcgagtcga gggaggcggg gcatgggtgg ctcct
//
LOCUS       DATGWW010000271         2020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_20693, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000271 DATGWW010000000
VERSION     DATGWW010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20693"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /locus_tag="VK150_04010"
     CDS             <1..522
                     /locus_tag="VK150_04010"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HLP30502.1"
                     /translation="LDLAVETFGWEPAPGPTGRGIGLACGAWRQGLVVALAQVTVDKA
                     TGKVKTERFLEAVDVGLVVNPDGARQQVEGAITMCIGQALSEEIHFKGGRILDKNFDT
                     YLLPRFSAIPRIQVVFAGTDTSVTQGIGEPPVVPVAAALANAVFDATGARVTHVPFTP
                     ERVLAALKLVPAS"
     gene            complement(587..1351)
                     /locus_tag="VK150_04015"
     CDS             complement(587..1351)
                     /locus_tag="VK150_04015"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLP30503.1"
                     /translation="MHSHPPFPSMPFMAAYAPLLRLFKGAARRGPGSEASTRQALALC
                     SLPDRPAVADLGCGSGAATLVLARALQVPILALDADGAALDDLWDIAGAQGLLPLITP
                     CPGDMGAPGIPRESLDLLWSEGAVAPLGWRQGLAIWKDLVRPGGFLALTDATWFEDPP
                     PPEAQRAWAQWYPGMGTEASNLQVAQDLGLEVIGHFRLPGQDWWDYFEQAERQCQLHQ
                     GDASLAETIAAIREETDLYRRAGHSYGYVFYILKKA"
     gene            1605..>2020
                     /locus_tag="VK150_04020"
     CDS             1605..>2020
                     /locus_tag="VK150_04020"
                     /inference="COORDINATES: protein motif:HMM:NF014626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HLP30504.1"
                     /translation="MCGRYTFTFDARTLAEAFGLVPPGFEIVKGYNIAPGQHIVIVRP
                     ERGVRVADLAHWGLIPGWVKDPNTSSRPINARAETLAEKPTFRGAFKRKRILIPASGF
                     YEWKAGGRAKQPYYIHPGEGGCFAFAGLMEDWQGPNG"
BASE COUNT          328 a          691 c          718 g          283 t
ORIGIN      
        1 ctggacctgg cggtggagac cttcggctgg gaacccgcgc ccggacccac gggccgaggc
       61 atcggcctgg cctgcggggc ctggcgtcag ggccttgtgg tggccctggc ccaggtgacc
      121 gtggacaagg ccaccgggaa ggtcaagacg gagcgcttcc tcgaggccgt ggacgtgggc
      181 ctggtggtga accccgacgg ggcccgccag caggtggagg gcgccatcac catgtgcatc
      241 gggcaggctc tcagcgagga gatccacttc aagggcggcc gcatcctcga caagaacttc
      301 gacacctacc tgctgccccg cttttcggcc atcccccgca tccaggtcgt gttcgcgggc
      361 accgacacct ccgtcaccca gggcatcggc gagccccccg tggtgcccgt ggccgccgcc
      421 ttggccaacg ccgtgttcga cgccaccggc gcgcgggtga cccacgtgcc gttcacgccc
      481 gaacgggtcc tcgcggccct gaagctcgtt cccgcgagct agctggatcc gagaggatcc
      541 ggtggccttc cccggcccgg ggaaggccac cggaccctct cggagctcag gccttcttca
      601 ggatgtagaa cacgtagccg tagctgtgcc cggcacgccg gtagaggtcg gtctcctccc
      661 ggatggcggc gatggtctcg gccaggctcg catcgccctg gtgcagctgg cactgccgct
      721 cggcctgttc gaagtagtcc caccagtcct gcccgggaag gcggaagtgg ccgatcacct
      781 ccaggcccag gtcctgggcg acctgaaggt tggaggcctc ggtgcccatg cccgggtacc
      841 actgggccca ggcgcgctgg gcttccggcg gcggaggatc ctcgaaccag gtggcatccg
      901 tcagggccag gaagccgccg gggcggacga ggtctttcca tatggccagg ccctggcgcc
      961 agccgagggg cgcgacggca ccctcggacc acagcaggtc gaggctctcc cgcgggatgc
     1021 caggcgcccc catgtcgccg ggacaggggg tgatcaaggg gagcaggccc tgggccccgg
     1081 cgatgtccca gaggtcgtcc agggcggcgc cgtcggcatc cagggccagg atcggcacct
     1141 ggagggcccg ggccagcacg agggtggcgg cgccggagcc gcagccgagg tccgccaccg
     1201 cggggcgatc gggcagcgaa cagagggcca gggcctggcg ggtggacgct tcgctgccgg
     1261 gccccctccg ggccgcgccc ttgaagaggc gaagcagggg cgcgtaagcc gccatgaacg
     1321 gcatggaggg aaaaggagga tgggaatgca tgggaatctc caaagacacg taccgaacga
     1381 gggacaggtc gtcccgaaca cagagagggc ttcaccgctt cgcttacgaa gcggcccgca
     1441 ccgtctcccc gctggccgtg cacatggatg acatccagac tccgccacca gggtagcgcc
     1501 aagggggccg cctgtcccgg gggcgcgtcc taccggcgcc agcccatctc aggagacctc
     1561 cgggaccgtc gaattccgga ggcattccca ggcatgctgt ctgcatgtgc ggacgctaca
     1621 ccttcacctt cgacgcgcgg accctggctg aggccttcgg gctggtgccg cccggcttcg
     1681 agatcgtgaa gggctacaac atcgctccgg gccagcacat cgtcatcgtg cgacctgaac
     1741 ggggtgtaag ggtggcggat ctggcccact ggggcctgat cccgggctgg gtcaaggatc
     1801 cgaacaccag ctcaaggccc atcaacgccc gggcggaaac gctggcggag aagcccacct
     1861 tccggggcgc gttcaagcgc aaacgcattc tcatcccggc ttccggattc tacgagtgga
     1921 aggcgggcgg gcgtgccaag cagccctact acatccaccc cggggagggc ggatgcttcg
     1981 ccttcgcagg cctgatggag gactggcagg gaccgaatgg
//
LOCUS       DATGWW010000272         4635 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_333331, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000272 DATGWW010000000
VERSION     DATGWW010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4635
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333331"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VK150_04025"
     CDS             <1..414
                     /locus_tag="VK150_04025"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30505.1"
                     /translation="DERALALLRVKKRARGILLAMPGGPDREALAEFLSEDGYGRVLC
                     ADTLTDLLEHVERPGIHLILVDGGVVELQGLALASLLRHRLEDEMPPVVLAEASVDAE
                     LVMGAQETGVAQILVKPYDLDLDFRRMIEGHLGLG"
     gene            463..1689
                     /locus_tag="VK150_04030"
     CDS             463..1689
                     /locus_tag="VK150_04030"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLP30506.1"
                     /translation="MALFERTVAERYLKTHRKGAFVRIMVRFARGGTALGVFAMVVTL
                     AVMNGFREEIQATLFSATAHFTVFHLAGDIQDTEGTLKAIRAVPGVQAASPIRLEKGL
                     LRRTDSDMPPEAVVVKAVDPATAHGTSSIFDSMQPAPIEQLKEGEIALGKELAQRMSL
                     KVGDMVALVFFRPELGLGGQQPKVAAFRVAGTFYSHSSEYDKAWAFIHLGDAMRIARA
                     EGRAEMIEVRARSIDAIAEVKPRVLAALGPTFEATDLRESNKALFAALVVEKWAFAAI
                     LSLIVLVAAFNIVASLVLLVTEKRRDLGVLLALGATPRQIQRLFELQGLRIGAVGTAW
                     GLGTSVPLCLVLDHFKLLKLPAAVYDFITYMPFRLKGLDIALVATLPLLVSWLAARYP
                     ARKAAALDPVDALRAE"
     gene            1686..2336
                     /locus_tag="VK150_04035"
     CDS             1686..2336
                     /locus_tag="VK150_04035"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLP30507.1"
                     /translation="MIGQPLSIQGLHKTYPGNAHPVFDGFDLEVEAGSLCAIVGVSGV
                     GKTTLLNCVAGLDHWESGRIAIGGSPVPEGAEPRALFRRRHVGLAFQQPHLLPEFTVR
                     ENLRMPLIIEGEVKPEAEAWIGQLLSTVGLGDLGERLPGQLSGGEAARAGLARALVRK
                     PALWLLDEPTGNLDPATAEEVFGFLLSLHAELRPTTLLVTHNPGLAERCMRTFRLG"
     gene            complement(2349..>4635)
                     /locus_tag="VK150_04040"
     CDS             complement(2349..>4635)
                     /locus_tag="VK150_04040"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLP30508.1"
                     /translation="SLETAQVTKAHRLAEAALKESQARFATIFRSNPLGIAVSRMSDT
                     RLVEANDALLEIFQVSREELIGRTAVEAGFYLHPEEREQILDQVRGEGRIRNFQFQCL
                     RKDGELRDMLTSGELISLGGEDHLLGMVSDITPLKQAERSLQASEGRYRSLFENMSEG
                     FAHCRLVKEADGDTDWIYLAVNPAYERVTGLRDVEGRRASEVIPGFREDLEALRTTVS
                     GVVRTGLPAKVETHLRAMGSWLMVSIYRPAPGEFVAVLDNITHRKEAEEALRASQSRF
                     MAVFKASPAGIVLSRSETGQIIDANPAFLRLVGYSLEEVHGRSSVELGLWVHPQDRVD
                     AIRQLNATGRIQDMEAELRTRSGETIFVLWSTERVLVGGEYVLVNLIKDETDRRRAAL
                     DRQRLEAEVAHAQKLESLGALAGGISHDMNNVLGAVMSLGSMLKEQHQGDPGLSRSMD
                     ILLHAAGRGRDLVKGLTDFARKDVTEAMPLDLNEVVRKEAALLTRTTLQKVAVELDLQ
                     GGLPQVVGDASSISNALMNLSVNALDAMPSGGCLNLRTRLDPGGEVILAVKDTGLGMS
                     PEVLQRAMEPFFTTKPPGKGTGLGLALVYGVMKAHGGRVEIQSAPGQGTEITLCFPGM
                     ASPSMPLLPPIRGVAARDGRLRILLVDDDDLIRGTVPGMLEVLGHEVVAVSGGLEALQ
                     RVQAGLVPDLVILDLSMPGMDGEEALNRLRLLCPDLPVLMATGYRDERQERILERFSD
                     VGVITKPFSLLDLRLKLAQIG"
BASE COUNT          694 a         1680 c         1514 g          747 t
ORIGIN      
        1 gatgaacggg ccctggccct gctgcgggtg aagaagcggg cccggggcat cctcctcgcc
       61 atgcccggag ggccggaccg cgaggccctg gcggagttcc ttagcgagga cggctacggc
      121 cgcgtcctgt gcgccgacac cctgacggac ctccttgagc atgtggagcg ccccggcatc
      181 cacctcatcc tcgtggatgg cggcgtggtc gaactgcagg gcctcgccct ggcctccctc
      241 ctgcggcacc gcctggagga cgagatgccc cccgtggtgc tcgccgaggc gtccgtggac
      301 gcggagctgg tgatgggcgc ccaggagacg ggcgtggcgc agatcctcgt gaagccctac
      361 gacctcgacc tggatttccg gcgcatgatc gaagggcacc tgggcctcgg ctagggctcg
      421 ggcagggcga ctcgaccagg cggcatcggc tagtcttgtg ccatggcctt gttcgaacgc
      481 actgtcgccg agcggtacct gaagacccac cgcaaggggg ccttcgtgcg catcatggtg
      541 cgcttcgccc gcggcggcac ggccctcggc gtattcgcca tggtggtgac cctggccgtc
      601 atgaacggct tccgcgagga gatccaggcc accctcttca gcgccacggc gcacttcacg
      661 gtgttccatc tggccgggga catccaggac accgagggga ccctcaaagc gatccgcgcc
      721 gtgccaggcg tgcaggcggc ctcgcccatc cgcttggaga agggcctgct gcgccgcacc
      781 gattccgaca tgccacctga agccgtcgtc gtcaaagccg tggatcccgc cacggcccat
      841 ggcacctcga gcatcttcga ctccatgcag cccgcgccca tcgagcagct caaggagggc
      901 gagatcgccc tgggcaaaga gctggcccag cgcatgagcc tgaaggtagg cgacatggtg
      961 gccctggttt tcttccgccc ggagctgggg ctcgggggcc agcagcccaa ggtcgccgcc
     1021 ttccgcgtgg cgggcacctt ctacagccac agctccgaat acgacaaggc ctgggccttc
     1081 atccatctgg gggatgccat gcgcatcgcc cgggccgaag gccgggccga gatgatcgaa
     1141 gtccgcgccc gcagcattga cgccatcgcc gaggtgaaac cccgggtgct ggcggccctc
     1201 ggccccacct tcgaggccac agacctgcgt gagtccaaca aggcgctctt cgccgcgttg
     1261 gtggtcgaga aatgggcctt cgccgccatc ctcagcctca tcgtgctggt ggcggctttc
     1321 aacatcgtgg cctccctcgt gctgctcgtg accgagaagc gccgcgacct gggcgtcctg
     1381 ctggccctgg gggcgacacc ccggcagatc cagcggctct tcgagctgca gggcctgcgc
     1441 atcggcgccg tgggcacggc ctgggggctg ggcaccagcg tcccgctctg cctggtcctc
     1501 gaccatttca agctcctgaa actgcccgcg gccgtctacg acttcatcac ctacatgccg
     1561 ttccgcctca aggggctgga catcgccctg gtggcgaccc tgccgctgct ggtctcctgg
     1621 ctggcggccc gctacccggc ccgaaaggcc gccgccctgg atcccgttga cgcgctgagg
     1681 gcggaatgat cggacagccc ctttccatcc agggcctgca caagacctac ccgggcaacg
     1741 cgcatccggt cttcgacggc ttcgacctcg aggtcgaggc gggcagcctc tgcgccatcg
     1801 tcggcgtgtc gggcgtgggc aagaccacct tgctgaactg cgtggcgggc ctggaccatt
     1861 gggaatccgg ccgcatcgcc atcggcggtt ccccggtgcc ggaaggtgcc gagccccgcg
     1921 ccctcttccg ccgccgccat gtgggcctgg ccttccagca gccccacctg ctgcccgagt
     1981 tcaccgtgcg ggagaacctc cgcatgcccc tcatcatcga gggcgaagtg aagccggaag
     2041 ccgaagcctg gattggacag ttgctgtcca ccgtgggcct gggcgacctc ggcgagcgcc
     2101 tgccggggca gctctcgggc ggcgaggctg cccgcgcggg cctcgcccgc gccctggtgc
     2161 gcaaacccgc cctctggctg ctggacgagc ccaccggcaa cctcgatccc gccaccgccg
     2221 aagaagtgtt cggcttcctg ctgagcctcc acgccgagct gcgccccacc accctgctgg
     2281 tcacccacaa ccccggcctg gcggaacgct gcatgcggac cttccggctg ggctgagacc
     2341 cgcgccgatc agccgatctg ggccagcttc aaacggaggt ccaggaggct gaacggcttc
     2401 gtgatcacgc ccacatccga gaaccgctcc agaatccgct cctggcgctc gtcccggtag
     2461 ccggtcgcca tgagcaccgg caagtcgggg cacagcaggc gcaggcggtt cagggcctct
     2521 tcgccatcca tgcccggcat gctgaggtcc aggatcacca ggtccggtac gagtccggcc
     2581 tgcaccctct ggagggcctc cagtccgccg ctcacggcca ccacctcatg gccgagcact
     2641 tccagcatgc ccggcaccgt gccccggatg aggtcatcgt cgtccaccag gagaatgcgg
     2701 agccgtccgt cccgggccgc caccccacga atgggaggga gcagcggcat cgacgggctg
     2761 gccatgccag ggaagcagag ggtgatctcc gtgccctggc ccggcgcgct ctggatctcc
     2821 acccgcccgc catgggcttt catgacgccg tagaccaggg ccaggccgag gccggtcccc
     2881 tttcccgggg gtttggtggt gaagaagggc tccatggccc gctgcagcac ctctggcgac
     2941 atcccgaggc ccgtgtcctt cacggcgagg atgacctccc cgccgggatc caggcgggta
     3001 cggaggttca agcagccgcc cgagggcatg gcatccaggg cgttcacgct gaggttcatc
     3061 agcgcgttcg agatggagct cgcgtcgccg accacctggg gcagcccgcc ctgcaggtcg
     3121 agctccacgg cgaccttctg caaggtggta cgggtgagca gcgcggcttc cttgcgcacc
     3181 acctcgttga ggtcgagggg catcgcctcg gtgacatcct tccgtgcgaa atccgtcagg
     3241 cccttcacca ggtcccggcc cctccccgcc gcatgcagga ggatgtccat ggacctcgac
     3301 agcccgggat cgccctggtg ctgctccttc agcatggaac cgagcgacat caccgcgccc
     3361 agcacattgt tcatgtcgtg ggagatgccc cccgccaggg ccccgagcga ctccagcttc
     3421 tgggcgtggg cgacctcggc ttccaggcgc tgccggtcca gcgcggcccg ccgccggtcg
     3481 gtctcgtcct tgatgaggtt caccagcacg tactccccgc ccaccagcac ccgttcggtg
     3541 gaccagagga cgaaaatggt ctcgccgctg cgggtgcgca attcggcctc catgtcctgg
     3601 atccggcccg tcgcgttgag ctggcggatg gcgtccaccc ggtcctgggg atggacccag
     3661 agccccagtt ccacgctgga acggccatgc acctcctcaa ggctgtagcc caccaggcgc
     3721 aggaaggcgg gattggcgtc gatgatctgg cccgtctcgg aacggctcag gacgatgccc
     3781 gcgggcgagg ccttgaagac ggccatgaac cgcgactggc tggcgcggag ggcctcctcg
     3841 gcctccttcc tgtgggtgat gttgtcgagc accgccacga attcgcccgg cgcgggccgg
     3901 tagatggaca ccatcagcca ggagcccatg gcccggagat gggtctcgac cttggccggc
     3961 aggcccgtcc gcaccacgcc gctgaccgtg gtccgcaagg cctctagatc ctcccggaaa
     4021 ccgggaatca cctcgctcgc ccggcgtccc tccacgtccc tcaggcccgt cacccgctcg
     4081 taggccgggt tgaccgcgag gtagatccag tcggtgtcgc catccgcttc cttgaccaac
     4141 cggcagtgag cgaagccctc cgacatgttc tcgaacagtg atcggtagcg cccttcgctg
     4201 gcctggagcg agcgctcggc ctgcttcaac ggcgtgatgt cggacaccat gcccagcagg
     4261 tggtcctcgc ctccgaggct gatgagctcc cccgacgtga gcatgtcccg gagctcgcca
     4321 tccttccgca ggcactggaa ctggaagttc cggatccggc cctcgcctcg cacctggtcg
     4381 aggatctgct cgcgttcctc cggatggagg tagaagcccg cctccaccgc ggtccggccg
     4441 atcagttcct cccggctcac ctggaagatc tccagcaggg cgtcgttcgc ctccaccagc
     4501 cgggtgtccg acatccggga cacggcgatg cccaaggggt tggagcggaa gatggtggcg
     4561 aagcgggcct ggctttcctt cagggcggcc tccgccaggc ggtgggcctt cgtcacctgg
     4621 gccgtctcca ggctg
//
LOCUS       DATGWW010000273         1759 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_246885, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000273 DATGWW010000000
VERSION     DATGWW010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1759
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246885"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..527)
                     /locus_tag="VK150_04045"
     CDS             complement(<1..527)
                     /locus_tag="VK150_04045"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HLP30509.1"
                     /translation="MDREASRPAIQEKVFVLSEDVLQALPPLGIPAPAPQPPAPSPPK
                     EKVPEIKPPLKQKQASPPKSRIELEAADLSEIGDLAIARENIQDKEAEAVVARPTPTR
                     PSAPVFLEGQPGILKGIPPEYPPRALERGLEGTVVAQVTIDTNGQVTEARIARSAGRD
                     FDESVLDAVRRLRFQP"
     gene            complement(707..1120)
                     /locus_tag="VK150_04050"
     CDS             complement(707..1120)
                     /locus_tag="VK150_04050"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HLP30510.1"
                     /translation="MAAAPEERGEDGITSINITPLVDVFLVLLILVMITSSLLDHREI
                     PVSVPQAAQAGVTAPKTSAIAMDIERRIYLDGNESDSAAIAAALRSKVAADSTHQVLI
                     AADKGLLYGEVARLLDWVRGAGVRKYALKVARAEG"
     gene            complement(1120..>1759)
                     /locus_tag="VK150_04055"
     CDS             complement(1120..>1759)
                     /locus_tag="VK150_04055"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HLP30511.1"
                     /translation="GMLLSDGFLQGIEQGILGLLLALGVAILFVFLFRWKAVGRVRAE
                     AEIWCRRLEKELAGEGPGPQGLQAAEGEGGAADRMARAGLNNAHLCPEALEKILETQE
                     VRERDLLERGAPFLGTVGANAPFLGLTGTVLGILAAFRRMAESGGSGGTEVMSSIAGA
                     LVATAAGLIIAIPAVVLYNLLKARIRRSLDSLREIRGLLLARSLQATVKETF"
BASE COUNT          302 a          549 c          615 g          293 t
ORIGIN      
        1 ggttggaagc ggaggcgacg gaccgcgtcg agaaccgact cgtcgaagtc ccggccggca
       61 cttcgcgcga ttcgcgcttc cgtgacctgt ccattggtat cgatggtgac ctgggccacc
      121 acggttcctt ccaggccccg ctccagggct cgcggcggat attcaggagg gatacccttg
      181 aggatacctg gctgtccctc caggaagacc ggtgccgagg gccgcgtcgg agtcgggcgc
      241 gccacgaccg cttcggcctc cttgtcctgt atgttttccc tggcgatagc caagtccccg
      301 atttcggaaa gatccgccgc ttccagctcg atccgcgact tggggggcga cgcctgtttc
      361 tgttttagag gcggttttat ttcgggaacc ttttccttcg gcggcgatgg agcgggaggc
      421 tggggcgcgg gagccggaat cccgagcggc ggaagggcct gaaggacgtc ctccgagagg
      481 acgaagacct tttcctggat ggcgggccgg gaggcctccc ggtccacggg ccaccaggcg
      541 cccaagccga acccgcaaag aagcaggacg gcgagggaac caggcggggc gcgggtggct
      601 ttccggggca cttggggcag ggatatgaca atcttggaga agatatcgcg acggactgga
      661 cgtatcgatc gccggccgcg aataccaggt cggcgggaaa cgtccctcat ccctcggccc
      721 gggcgacttt cagggcgtac ttgcggacgc cggcgccccg tacccaatcg aggaggcgcg
      781 ctacttcccc gtagaggagg cccttgtccg cggcaatgag gacttggtgg gtcgaatccg
      841 ccgccacctt ggacctgagg gccgcggcga tggcggccga atcggactcg ttaccatcga
      901 ggtagatgcg cctctcaatg tccatggcga tggcggaggt cttaggcgcc gtcacccccg
      961 cttgggccgc ttgcggcacg ctcacgggga tttcccgatg atcaaggagg gaagaggtaa
     1021 tcatgacgag gatgagaagg accaggaaga catccaccag gggggtgatg ttgatggacg
     1081 tgatgccgtc ctctcccctt tcctccggcg cggccgccat cagaaggtct ccttgacggt
     1141 cgcctgcagg ctgcgagcga ggagcaggcc gcggatttcc ctcagggaat ccagggagcg
     1201 gcggatacga gccttgagaa ggttgtagag gaccacggcg gggatggcga tgatgaggcc
     1261 ggcggcggtg gcgacgagag cgccggcgat ggaggacatc acttccgtcc cgccgctccc
     1321 ccccgattcc gccatgcggc ggaaggctgc gaggatgccg agcacggtgc cggtgagccc
     1381 gaggaatggc gcattggcgc ccacggtccc gagaaaggga gcgccccgct ccaggagatc
     1441 gcgctcacga acctcctggg tctcgaggat cttctcgagc gcttcggggc agagatgggc
     1501 attgttcaat ccggcccggg ccatgcggtc cgcggctccc ccttctccct cggccgcctg
     1561 gagaccctga ggtcccgggc cttcgccggc cagttccttc tccaggcggc ggcaccagat
     1621 ctcggcttcg gcgcggaccc ttcccaccgc cttccagcgg aacaggaaga cgaagaggat
     1681 ggctacgccc aaggccagga ggaggccgag gatgccttgc tcgatgccct gcaggaatcc
     1741 atcggagagg agcatgccc
//
LOCUS       DATGWW010000274         3403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_333510, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000274 DATGWW010000000
VERSION     DATGWW010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3403
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333510"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1141)
                     /locus_tag="VK150_04060"
     CDS             complement(<1..1141)
                     /locus_tag="VK150_04060"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HLP30512.1"
                     /translation="MKKTLLFLLAGSALTLSAQQGQAWVMGHLGQTMFDKDKHTPPGF
                     AAIELKDQVHFGLGVGHWYSDRWGIDLRALRHNLEADNYPGAPSGEETHLLLSGLFNF
                     RPGAGNWYPYLSAGLGGTNVEKKYSPSGKETTRFNYHGGLGIMGKPAENFLLDVSAKA
                     VSVELPKSRMEYLVTLGLGYTWGGGRKAAPAPAPAPAPLPEPKPEPKVEPVAPPPPPP
                     PAPEPPKEVAKPVPPPPPPPPPAKIVLDEATLHFANGKAELGPDATAAIQKVADGLKA
                     YPGDYKLEVSGHTSSVGGKALNKALAKRRADAVAKILVDSGIPASKVTTVGVGPDKPI
                     ADNATKDGQAKNRRVEIDVQVKDGKAEVRKTETGTVDAGTPAPAPA"
     gene            complement(1401..1517)
                     /locus_tag="VK150_04065"
     CDS             complement(1401..1517)
                     /locus_tag="VK150_04065"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HLP30513.1"
                     /translation="MQNELKTSTTGTVSIVHVQEGATVETGAALVTVAAPGS"
     gene            complement(1558..2082)
                     /locus_tag="VK150_04070"
     CDS             complement(1558..2082)
                     /locus_tag="VK150_04070"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HLP30514.1"
                     /translation="MKRTLILGKEQLDVEFLHQDGASSLVWEGQTHPIDILELEPGCY
                     SILMDGRSVEVRLDAGRSPDSETHAYRAMLYDGPYEFSLVDPRRALLAGAGAAGAGGG
                     LLSSPMPGKIVKLLVKAGDPVQEGQTLLVMEAMKMQNELKTSTTGTVSIVHVQEGATV
                     ETGAALITVVAPGA"
     gene            complement(2098..>3403)
                     /locus_tag="VK150_04075"
     CDS             complement(2098..>3403)
                     /locus_tag="VK150_04075"
                     /inference="COORDINATES: protein motif:HMM:NF014805.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HLP30515.1"
                     /translation="VEKILDVCRRSGADAVHPGYGFLSENAEAARAFEAAGITFIGPR
                     PECIVSMGSKTAAREVAIAAGCPVVPGIQETMADEELLAASLKIGFPVMLKAAMGGGG
                     KGMRLVHKPEEFTAALARARGEALSSFGDDSVYVEKAIVQPRHIEIQVFSDTHGNHVY
                     LHERECSVQRRHQKVIEEAPSPHVTPEMRRAMGESALKVARAVNYVGAGTVEFLADAD
                     RNFYFLEMNTRLQVEHPVTEWITGLDLVKWQILVARGEKLPMTQEEIPLNGWAMECRV
                     YAEDPDKNFMPSPGKITFLRTPSGRNVRDDSGVYEGADVPMFYDPMISKLSTWGPTRL
                     EAIERMRAALGEYRIGGIRHNIAFHEALMEHEPFRAGALHTGMLDKPFWKRKEQGPDL
                     KFAVAAALLHELETEQRRAAQPDPGGDGKPDAWKHWGRFNRL"
BASE COUNT          514 a         1109 c         1147 g          633 t
ORIGIN      
        1 gcgcgggggc aggtgccggg gtgccggcgt ccacagtgcc ggtctcggtc ttgcggacct
       61 cggccttgcc atccttcacc tggacatcga tctccacgcg acggttcttg gcctgcccat
      121 ccttggtggc gttgtcggcg atgggcttgt cggggcccac gcccacggtg gtcaccttgc
      181 tggcgggaat gcccgaatcc accaggatct tggccaccgc gtcggcgcgg cgcttggcca
      241 gggccttgtt cagagccttg ccgcccacgg acgaggtgtg gccgctgact tccagcttgt
      301 agtcgcccgg ataggccttg aggccatcgg ccaccttctg gatggcggcg gtggcatcgg
      361 ggcccagctc ggccttgcca ttggcgaagt ggagcgtcgc ctcatccagc acgatcttgg
      421 ccggtggcgg tggagggggc ggcgggggta cgggcttcgc gacctccttg ggcggttcgg
      481 gggcgggcgg aggcggcggg ggcggtgcca ccggctccac tttcggctcg ggtttgggtt
      541 caggcagggg cgccggcgcc ggggccgggg cgggcgcggc cttccggccg ccaccccagg
      601 tgtagcccag gcccagcgtg accaggtact ccatgcgcga cttgggcagt tccacgctca
      661 cggccttggc gctgacgtcc agcaggaagt tctccgcagg cttgcccatg atgccgaggc
      721 cgccgtggta gttgaaccgg gtggtttcct tgccgctggg ggagtatttc ttctccacat
      781 ttgtgccgcc aaggcccgcc gagaggtacg gataccagtt gccggcgcca gggcggaagt
      841 tgaacaggcc cgaaagcagc aggtgggttt cttcccccga aggggcgccc gggtaattgt
      901 cggcctctag gttgtggcgg agagcccgca gatcaatgcc ccaacgatca gagtaccagt
      961 ggccgacgcc aagcccgaag tggacttggt cctttagctc gattgcggca aacccgggag
     1021 gggtgtgctt gtccttgtcg aacatggtct ggcccaggtg acccatgacc caggcttgac
     1081 cctgctgcgc tgacagggtc aatgcggacc ccgcaagcag gaatagaagc gtttttttca
     1141 tggcaactcc gtggtttgtg attgtgatca cgccccaacg gtagacgccg ccgaaccacg
     1201 catgcaacga aaaaagctct cagaccgaaa aggctagatt gctaatatca gatggtttac
     1261 atcaagattt gataggaatt aatcgatcgt caccacagct actccgagcc ctgcccacgc
     1321 cgttcgtcaa gcgacacaaa gggattctcc aatgggcatt cgagactgac cccgggtagt
     1381 gaggctgggg tctggccgtt tcagctccca ggcgccgcca ctgtgacgag cgccgccccc
     1441 gtctccacgg tggcgccctc ctggacatgc acgatggaca cggtcccggt tgtgctggtc
     1501 ttcagctcat tctgcatttt ctcggcatcg cccgcggcga tgcgcgaggc ctcccattca
     1561 agccccgggc gccaccaccg tgatgagcgc cgcccccgtc tccacggtgg cgccctcctg
     1621 gacatgcacg atggacacgg tcccggttgt gctggtcttc agctcattct gcattttcat
     1681 cgcctccatc acgaggaggg tctggccttc ctgcacggga tcaccggcct tcaccaggag
     1741 cttcacgatc ttgccgggca tgggggagga cagcaggccg ccgccggccc ccgcggcgcc
     1801 cgctcccgcc aggagggccc ggcgggggtc caccaggctg aactcgtagg gaccgtcgta
     1861 gagcatcgcc cggtaggcgt gggtctcgga gtccggggac ctgcccgcgt ccaggcggac
     1921 ttccacggaa cggccgtcca tgaggatgga atagcagccg ggttccagtt ccaggatgtc
     1981 gatgggatgg gtctgcccct cccagaccag cgagctggcg ccgtcctggt ggaggaattc
     2041 cacgtctagc tgttccttgc cgaggatgag ggtgcgcttc atggtggatt cctcgggtta
     2101 caagcggttg aaccggcccc agtgtttcca ggcgtcgggc ttgccgtcac cgccgggatc
     2161 gggctgggcg gcccggcgct gttcggtttc gagctcgtga aggagggcgg cggccacggc
     2221 gaacttgagg tcgggcccct gttccttccg cttccagaaa ggcttgtcga gcatgcccgt
     2281 gtgcagggcg cccgcgcgga agggctcgtg ttccatgagc gcctcgtgga aggcgatgtt
     2341 gtggcggatg ccgccgatgc ggtattcccc cagcgccgcg cgcatgcgct caatggcctc
     2401 cagccgagtc ggaccccagg tgctgagctt gctgatcatg gggtcgtaga acatgggcac
     2461 gtcggcccct tcgtagacgc cgctgtcatc gcgcacgttc cggccgctgg gggtgcgcag
     2521 gaaggtgatc ttcccggggc tcggcatgaa gttcttgtcg ggatcctcgg cgtagacgcg
     2581 gcactccatg gcccagccgt tgagggggat ctcctcttgg gtcatgggca gcttctcccc
     2641 ccgggcgacc aggatctgcc acttcaccaa gtcgaggccc gtgatccact cggtgacggg
     2701 atgctccacc tggaggcgcg tgttcatctc caggaagtag aagttgcggt ccgcgtccgc
     2761 caggaattca accgtgccgg cgcccacata attgaccgcc cgcgccactt tcagcgcgga
     2821 ctcgcccatg gcccggcgca tctccggcgt cacgtggggg ctaggggcct cctcgatcac
     2881 cttctggtgg cggcgctgca cggagcactc ccgctcgtgc aggtagacgt ggttgccatg
     2941 ggtgtcggag aagacctgaa tctcgatgtg ccgaggctgg acgatggcct tctccacgta
     3001 cacgctgtca tcgccgaagc tggacagcgc ctcgccgcgc gcccgggcca gggccgcggt
     3061 gaactcctcc ggcttatgga caaggcgcat gcccttgccg ccgccgccca tggccgcctt
     3121 gagcatcacg ggaaagccga tcttcagcga ggccgcgagc agctcctcgt ccgccatggt
     3181 ctcctggatg ccaggcacca caggacatcc ggccgcgatg gccacttccc gggccgcggt
     3241 cttcgagccc atgctcacga tgcactcggg gcgggggccg atgaaggtga tgcccgcggc
     3301 ctcgaaggcc cgggccgcct cggcgttctc ggacaggaac ccgtagcccg gatgcacggc
     3361 gtcggcgccg ctgcgcctgc agacatcgag gatcttctcc acc
//
LOCUS       DATGWW010000275         1767 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_429660, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000275 DATGWW010000000
VERSION     DATGWW010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429660"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..999)
                     /locus_tag="VK150_04080"
     CDS             complement(<1..999)
                     /locus_tag="VK150_04080"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HLP30516.1"
                     /translation="MPVRDAASPSTPSAEWWRGAAIYQIYPRSFQDTNGDGVGDLRGI
                     TAHLAYVADLGVDAIWISPFFTSPMKDFGYDVSNYRDVDPTFGTLADFDRLVAEAHRL
                     GLKVLIDQVLSHSSDQHAWFKESRSSRTNAKADWYVWADANPDGTPPNNWQSVFGGSA
                     WTWEPRRRQYFLHNFLDSQPDLNFHHEPVQAQMLEEVRFWMERGVDGFRFDACNFHFH
                     DKKLRNNPAARSKKLELSTVQEGNPYGCQIHRYDKSRPENLGFLKRLRDLMNEYGAMS
                     VGEVGDEGALATMAEYTAHGDKLHMAYGFSLFTEEFSAERIRSVVQEFEKHIHRGGG"
     gene            1400..>1767
                     /locus_tag="VK150_04085"
     CDS             1400..>1767
                     /locus_tag="VK150_04085"
                     /inference="COORDINATES: protein motif:HMM:NF014715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - glucose binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HLP30517.1"
                     /translation="MSATADNLILVADVGGTNLNLALLHPEGRRFRLARKARFSTQEE
                     ISLLEPIQRFLASDPSLRPRRACLAGAGPVLDRRIHLTNAPWDLDAAALERALGIPVH
                     LVNDFIALSCGVLGLDLDDPG"
BASE COUNT          284 a          556 c          606 g          321 t
ORIGIN      
        1 gccacccccg cggtggatgt gcttctcgaa ctcctgcacc acggagcgga tgcgctcggc
       61 gctgaactcc tccgtgaaga ggctgaagcc gtaggccatg tgcagcttgt cgccatgggc
      121 cgtgtactcg gccatggtgg ccagggcgcc ctcgtccccg acctcgccca cgctcatcgc
      181 gccgtactcg ttcatgaggt cgcgcagccg cttcaggaag cccaggttct cgggccggct
      241 cttgtcgtag cggtggatct ggcagccgta ggggttgccc tcctgcaccg tggacagctc
      301 gagcttcttc gaccgggccg ccgggttgtt ccgcagcttc ttgtcatgga agtggaagtt
      361 gcaggcgtcg aagcggaatc cgtccacccc ccgttccatc cagaagcgga cctcttccag
      421 catctgggcc tgcacgggct cgtggtggaa attgaggtct ggctgcgaat ccaggaagtt
      481 gtggaggaag tactggcggc gacggggctc ccaggtccag gcggagccgc cgaacaccga
      541 ctgccagttg ttggggggcg tgccatccgg gttcgcgtcg gcccagacgt accaatcggc
      601 cttggcgttg gtgcggctcg accggctctc cttgaaccag gcgtgctggt cggaggagtg
      661 ggacagcacc tggtcgatga ggaccttcag gcccaggcgg tgggcctccg ccaccaggcg
      721 gtcgaaatcc gccagggtgc cgaacgtggg gtccacgtcc cggtagttcg acacgtcgta
      781 gccgaaatcc ttcatgggcg acgtgaagaa gggcgagatc cagatggcgt ccacccccag
      841 gtcagccacg taggccaggt gggccgtgat gccccgcagg tcgcccacgc cgtccccgtt
      901 ggtgtcctgg aagctccggg gatagatctg gtagatcgcc gcgccgcgcc accattcggc
      961 agaaggggtg gaagggctgg cggcatcccg gacgggcatg gctggaatcc tgtgggggtt
     1021 ggggggttca ggtctttgta accggttaca agactgaaat gacttggcgg ttcctgacgg
     1081 atgccgggag gcggtgctgg aaagacaggg gaagggcggg aagatgtatg taaacggtta
     1141 caaggtggtc gcaggtatgg tcaaccgcgg tcacaggtct gtcaagctga gaaccggggt
     1201 gctgggaact ttttgacgaa tgccatcaaa cccatgaatg tattcacttc tggattcaat
     1261 tcgccgcagc ggggcaccgg gaaggccggg gtccgagggt ggacgtccga ccgaagggcg
     1321 aggaccatca acaccatgcg gcttgttccc gggcgacagc ctcgcaagtc cctgtgttcc
     1381 gtatctgagg tgttcgttcg tgagtgcaac cgctgacaat ctcatcctgg tggccgatgt
     1441 ggggggcacc aacctcaacc tggcgctgct ccaccccgag ggtcggcggt tccgcctggc
     1501 ccggaaggcg cgcttcagca cccaggagga gatctccctt ctcgagccca tccagcggtt
     1561 cctggcctcg gatccctccc tgcggccccg gcgggcctgc ctggcggggg cgggcccggt
     1621 gctggaccgc cgcatccacc tcaccaacgc cccctgggac ctggacgccg cggccctgga
     1681 gcgggccctc ggcatccccg tccacctcgt gaacgacttc atcgcgctgt cctgcggcgt
     1741 cctgggcctc gacctggacg acccggg
//
LOCUS       DATGWW010000276         2647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_294190, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000276 DATGWW010000000
VERSION     DATGWW010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2647
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294190"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1479
                     /locus_tag="VK150_04090"
     CDS             <1..1479
                     /locus_tag="VK150_04090"
                     /inference="COORDINATES: protein motif:HMM:NF027439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HLP30518.1"
                     /translation="AKGKKTFLALDPATREYIPQVKRDWPILKELKGLDDPSEKVKTL
                     LTSDTEAGRLAWRCISPNLTYAVNRLGEVTDGPLNVDRAIKNGFAFEVGPFELWDLLG
                     VDRVVARMRFEDQPIAPLVERMLAKGITSFYRWEYGVPVAQLNPKTLAYDAILEDKRV
                     IILKREEGRGKVVAENGSAQLIDLGDDVACLSFRSKMNALDDGIIGLMEDTIQKHVPG
                     RFKGLVVGNQGQHFSAGANLVMVLNAAKDKQFDLIEEVARRLQYAGRMLTYAPFPTVA
                     APFNLALGGGCEVTMACQRAVGHAELYIGLVEVGVGVIPAGGGCLQMLLRMEDAMAAK
                     GELGPMPKVKAAFQGIGTATVHTSFDEAQRNGYLRRTDRRVMNKAFLLHEAKQEVLNM
                     AADFQPVKERTLRLPGRGGSEALKMAVRDFQLQGLASEHDAVIMAELANILCGGDVSL
                     VQDVTEERILELERQAFARLCSYEKTQARMDAILKTGKPLRN"
     gene            1729..>2647
                     /locus_tag="VK150_04095"
     CDS             1729..>2647
                     /locus_tag="VK150_04095"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HLP30519.1"
                     /translation="MLESLLFVAGALPRKGSIKEGNTVGDASMEAKARQMSVEASLAA
                     CEYQGEAWTLIDCPGSVEFRQETVHALMAADIAVVVCDPDPARALMAAPALKFLDDHK
                     IPHVLFINKMEAAGSAAKLKDALNALQLVSERPLVLVELPIREGDQVTGYVDLISEHA
                     YKYEAGRDADLKQMPESLLPEEHEARQLMLEKLADFDDHLMEELLGDVMPSLEEVSED
                     MAKDVQQDLLVPVFFGSADKDAGVRRLFQALCEEAPRVDATAARLGIPEGKDALVQVF
                     KTVHAQHVGKLSISRVWRGEVADGASPAGN"
BASE COUNT          475 a          897 c          875 g          400 t
ORIGIN      
        1 gccaagggca agaagacctt cctggccctg gatcccgcca cccgcgagta catcccccag
       61 gtgaagcgcg actggccgat cctgaaagag ctgaagggcc tggatgatcc ttccgagaaa
      121 gtgaagacgc tgctcaccag cgacaccgag gcggggcgcc tggcctggcg ctgcatctcg
      181 cccaacctca cgtacgccgt gaaccgcctg ggcgaggtga ctgacggccc cctgaacgtg
      241 gatcgcgcca tcaagaacgg cttcgccttc gaggtgggtc ccttcgagct gtgggatctc
      301 ctcggggtgg accgcgtcgt ggcccgcatg cgcttcgagg accagcccat cgcgcccctc
      361 gtcgagcgga tgctcgccaa gggcatcacc agcttctacc gctgggagta cggcgtcccc
      421 gtggcccagc tgaatcccaa gacgctggcc tacgacgcca tcctcgaaga caagcgggtg
      481 atcatcctca agcgcgagga gggccggggc aaggtggtgg ccgagaacgg cagcgcccag
      541 ctcatcgacc tcggcgacga cgtggcctgc ctcagcttcc gcagcaagat gaacgccctg
      601 gacgacggca tcatcggcct catggaagac accatccaga agcacgtgcc gggccgcttc
      661 aagggcctgg tggtgggcaa ccagggccag cacttcagcg ccggcgccaa cctggtgatg
      721 gtgttgaacg ccgccaagga caagcagttc gacctcatcg aagaggtggc ccggcgcctg
      781 cagtacgcgg gccgcatgct cacctacgcc ccgttcccca cggtggcggc gcccttcaac
      841 ctggcgctgg gcggcggctg cgaagtgacc atggcctgcc agcgggccgt gggccacgcc
      901 gagctctaca tcggcctggt ggaagtgggc gtgggcgtca tcccggcggg cggcggctgt
      961 ctgcagatgc tgctccgcat ggaggatgcc atggccgcca agggcgagct gggccccatg
     1021 cccaaggtga aggccgcctt ccagggcatc ggcacggcca ccgtgcacac cagctttgac
     1081 gaagcccagc gcaacggcta cctgcggcgc acggaccgcc gggtgatgaa caaggccttc
     1141 ctgctccatg aggccaagca ggaggtcctc aacatggccg ccgacttcca gcccgtgaag
     1201 gaacgcaccc tgcgcctgcc cggccggggc ggcagcgagg ccctgaagat ggccgtgcgc
     1261 gacttccagc tgcagggact cgccagcgag cacgacgcgg tcatcatggc cgagctggcc
     1321 aacatcctct gcggcggcga cgtgagcctg gtgcaggacg tgaccgagga gcggatcctg
     1381 gaactggagc ggcaggcctt cgcccgcctc tgcagctatg agaaaaccca ggcccgcatg
     1441 gacgccatcc tgaagacggg caagccgctg aggaattaga aagccactca cggcgttctc
     1501 tgcggtgaat aatcccttga acctgccgca acacttccaa gatttgtgac ttaagccgcc
     1561 ttttcccggg cggctttttt ttggtgttgc cagggggtgg tgaggtcgga acacttgggg
     1621 cggtccacat ctgaaccaca caatccagga ggcactgtga gcggaaattc ccagtcaact
     1681 ccacgcgtag cggccatcgt ggggccctac ctctccggaa agacctcctt gttggagagc
     1741 cttctcttcg tggcaggcgc cctgccgcgc aagggctcca tcaaggaggg gaacaccgtc
     1801 ggcgacgcct ccatggaagc caaggcccgt cagatgagcg tggaggccag cctggccgcc
     1861 tgcgagtacc agggcgaggc ctggaccctc atcgactgcc cgggttccgt cgagttccgc
     1921 caggagacgg tccacgccct catggccgcc gacatcgccg tggtggtctg cgatcccgat
     1981 cccgcccgcg ccctgatggc cgcgccggcc ctgaagttcc tcgacgacca caagatcccc
     2041 cacgtcctct tcatcaacaa gatggaggcc gcgggcagcg ccgcgaagct gaaggacgcg
     2101 ctcaacgccc tgcagctggt ctccgagcgt ccgctggtgc tggtggagct gcccatccgc
     2161 gagggcgacc aggtcaccgg ctacgtggac ctcatcagcg aacacgccta caagtacgag
     2221 gcgggccggg acgccgatct gaagcagatg cccgaatccc tcctccccga ggagcacgag
     2281 gcccgtcagc tgatgctgga gaagctcgcg gatttcgacg accacctcat ggaggagctg
     2341 ctgggcgacg tgatgccctc cctggaggag gtcagcgagg acatggccaa ggacgtgcag
     2401 caggatctgc tggtgcccgt gttcttcggc tccgccgaca aggacgccgg ggtgcggcgc
     2461 ctgttccagg ccctctgcga ggaggcgccc cgggtggacg ccaccgcggc ccgcctgggc
     2521 attcccgagg gcaaggatgc cctggtgcag gtgttcaaga ccgtgcacgc ccagcatgtg
     2581 ggcaagctga gcatctcccg cgtgtggcgc ggcgaggtgg ccgacggtgc ctcccccgcc
     2641 gggaacc
//
LOCUS       DATGWW010000277         1691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_429684, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000277 DATGWW010000000
VERSION     DATGWW010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429684"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1691
                     /locus_tag="VK150_04100"
     CDS             <1..>1691
                     /locus_tag="VK150_04100"
                     /inference="COORDINATES: protein motif:HMM:NF016768.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate synthase central domain-containing
                     protein"
                     /protein_id="HLP30520.1"
                     /translation="VKLDLETGRVHFRDASLSRENRDAAFDPRTTPIGTLPESAPPEG
                     PVSAFRKTLFTCSREELEKVLYPMIATGKEAIGSMGDTARPNVFSSEPRPFFDYFYQH
                     FAQVTNPPLDYLREGNITDLRVFLGRAPNIFFPKDLVPLTEALELPRPILDLGQMRFL
                     TRMQSLRPSESHIIPRTFPMLFERKEGVTGFHAAVARLASDVKEAVASGTSVIILSDL
                     DATVERPPIPGLVALRAVVHTLNESGLRLNASIVMQTAEARTSHHLAALISFGASAVC
                     PTLALEIARRDEHPSFAALTPDQREQNLVVALESGLLKIMAKSGISVVQSYMSAKLFT
                     AVGLGPELMETFFPGHASPLGGIGYEELAGDVLLKTSLAAQSGFQDRLLHTHQFRESP
                     RLDEGERHGMTSARARLIHRLVALDPDGPEAQAVYGEYLASLKADEPINPRHLLAFRE
                     AVAPLPLPEVESRSEVFARFGAGAMSFGAVSAESQRDLILAMEALGGRSNSGEGGENP
                     FYWTDGLTATTKQVASARFGVTAEYLVSGQEIQIKVAQGAKPGEGGQLMRVKVDE"
BASE COUNT          264 a          644 c          539 g          244 t
ORIGIN      
        1 gggtgaagct ggatctcgag acgggccggg tgcacttccg cgacgccagc ctctcgcggg
       61 agaaccggga cgcggccttc gacccccgca ccacgcccat cggcaccctg ccggaaagcg
      121 cgccgccgga aggccccgtg agcgccttcc ggaagacgct cttcacctgc tcgcgggaag
      181 agctcgagaa ggtgctctat cccatgatcg ccacaggcaa ggaggccatc ggctccatgg
      241 gcgacaccgc gcggcccaac gtcttctcct cggaaccgcg ccccttcttc gactacttct
      301 accagcactt cgcgcaggtc acgaacccgc ccctggacta ccttcgcgag ggcaacatca
      361 ccgacctgcg cgtcttcctg ggccgggcgc cgaacatctt cttccccaag gacctggtgc
      421 ccctgaccga ggcgctggag ctgccccggc ccatcctcga cctgggccag atgcgcttcc
      481 ttacccgcat gcagagcttg cggccctcgg aatcccacat catcccgcgc accttcccca
      541 tgctcttcga acgcaaggag ggcgtgaccg gcttccacgc ggctgtggcc cggctggcct
      601 ccgacgtgaa ggaggccgtg gcctcgggca ccagcgtgat catcctcagc gacctcgacg
      661 ccacggtgga gcgcccgccg atcccgggcc tcgtggccct ccgcgcagtg gtgcacaccc
      721 tcaacgaatc ggggctgcgg ctgaacgcct ccatcgtcat gcagacggcg gaggcccgca
      781 cctcccacca cctggcggcc ctcatcagct tcggggcatc ggcggtgtgc ccgaccctgg
      841 ccctggagat cgcccgccgg gacgagcacc cctccttcgc ggccctgacg ccagaccagc
      901 gggagcagaa cctcgtggtc gcgctggagt cgggcctgct gaagatcatg gcgaagtcgg
      961 ggatctcggt ggtgcagagc tacatgagcg ccaagctctt caccgccgtg ggcctggggc
     1021 ccgagctgat ggagaccttc ttccccggcc acgccagccc cctgggcggc atcggctacg
     1081 aggagctggc gggcgacgtg ctgctgaaga ccagcctggc ggcccagtcc ggcttccagg
     1141 accgcctgct gcacacccat cagttccgcg aatcgcctcg gctggacgaa ggtgagcgcc
     1201 acggcatgac ctccgcccgg gcccggctca tccaccgcct ggtggcgctc gaccccgacg
     1261 ggcccgaggc ccaggcggtc tatggcgagt acctggcctc gctgaaagcc gacgagccca
     1321 tcaacccgcg ccacctgctg gccttccgcg aggccgtggc gcccctgccc ctgcccgagg
     1381 tcgaatcccg gtccgaggtc ttcgcccgct tcggcgccgg ggccatgtcc ttcggcgccg
     1441 tcagcgccga gagccagcgc gacctcatcc tggccatgga ggccctcggc gggcgcagca
     1501 acagcggcga gggcggcgag aatcccttct actggaccga cggcctcacc gccaccacca
     1561 agcaggtggc ctccgcccgc ttcggcgtca cggcggaata cctggtctca ggccaggaga
     1621 tccagatcaa ggtggcccag ggcgccaagc ccggcgaagg tggccagctc atgcgggtga
     1681 aggtggacga g
//
LOCUS       DATGWW010000278         3625 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_333824, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000278 DATGWW010000000
VERSION     DATGWW010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3625
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333824"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(251..1450)
                     /locus_tag="VK150_04105"
     CDS             complement(251..1450)
                     /locus_tag="VK150_04105"
                     /inference="COORDINATES: protein motif:HMM:NF020252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HLP30521.1"
                     /translation="MEPIYVGRQPIFTRNLELFAYELLFRGQMAPGTPFSGDVATSHV
                     LVNSIMDMGLENLVGHHPAFINLSEGFLDGSYPLPAAPEQVMLEVLEDVAPTPTVLMN
                     LKRLRERGYTIALDDFVYRPELEPLLKLAQIVKLDVQALSADELRDHYAFLRQRPVQL
                     LAEKVETHEEYHRCRDMGFDLFQGYFLARPEVVEGRAGKADQSVIMSLIARLQDPDAD
                     LEELEQLIVQDVRLTWRLLRHVNSACFALRREVESVREAIVFLGTHTIRNWACLLLLT
                     RVDRKPRELINTALVRAKMCEQLAVAQRASGPHAYFTTGLFSMLDAFIDRPLHDLLES
                     LPLSRAIKAALLKFEGHMGETLQRVMWYEKAAWDRLEDGAVDGPTYTRSYVEALRWAN
                     ASVMLTD"
     gene            complement(1652..1819)
                     /gene="rpmG"
                     /locus_tag="VK150_04110"
     CDS             complement(1652..1819)
                     /gene="rpmG"
                     /locus_tag="VK150_04110"
                     /inference="COORDINATES: protein motif:HMM:TIGR01023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HLP30522.1"
                     /translation="MAKSNRDKIKLVSSAGTGHFYTTTKNKRTMPEKMEIKKFDPVVR
                     QHVVYKEAKIK"
     gene            complement(1831..2067)
                     /gene="rpmB"
                     /locus_tag="VK150_04115"
     CDS             complement(1831..2067)
                     /gene="rpmB"
                     /locus_tag="VK150_04115"
                     /inference="COORDINATES: protein motif:HMM:NF013026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HLP30523.1"
                     /translation="MSRVCQVTGKGPMSGHNVSHANNKTKRRFLPNLQNHRFWVEGEK
                     RFVSLRVSTAGMRLIDKKGIEAVLADLRARGEKV"
     gene            complement(2305..2979)
                     /gene="radC"
                     /locus_tag="VK150_04120"
     CDS             complement(2305..2979)
                     /gene="radC"
                     /locus_tag="VK150_04120"
                     /inference="COORDINATES: protein motif:HMM:TIGR00608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HLP30524.1"
                     /translation="MAITDWPLEERPREKLLARGPHALSDAELLAIFLRTGVRGKTAV
                     DLARELLTAFGGLRPLLEADPRRFCAAHGLGQAKYVQLQATLELARRHLLATLERGDV
                     LGSPEATRRYLALRLRDRPQEVFAVLFLDNRHRVIAFEELFHGTIDGASVHPREVVRQ
                     AMGHNAAAVILAHNHPSGVAEPSRADESITRRLREALALVDIRVLDHVIVGDGQAVSL
                     AERGLL"
     gene            3173..>3625
                     /locus_tag="VK150_04125"
     CDS             3173..>3625
                     /locus_tag="VK150_04125"
                     /inference="COORDINATES: protein motif:HMM:NF014494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavoprotein"
                     /protein_id="HLP30525.1"
                     /translation="MHELEGKHILLGVTGGIAAYKAPDLVRRLRRAGAEVRVVTTRAA
                     EEFVTPLSLQAVSGHPVRREIFDSEAEAGMDHIALARWADAVLVAPATADFMARLAAG
                     LGDDLLATLCLATKAPIALAPAMNHVMWQAPATRENARCLEARGIRLFG"
BASE COUNT          599 a         1146 c         1222 g          658 t
ORIGIN      
        1 agtggacgat tacggcaacc tgcatctgat agagtcagac acgagctccc gttaggtcac
       61 gttggtgtct tcgcgactac gtgacaggat gttgcaccga actaaaggca tgtcacgtag
      121 ctatcgcaac gtgacctaca aaaactgctt cgaaaatggc gtgagcggag cgaactcatt
      181 ccctcgtacc tcgctcctcg gacctcgtac ctgccgtgac cgtacctcgc tcctcgaacc
      241 tcgttcctgc ctagtccgtg agcatcacgc tcgcgttcgc ccagcgcagg gcctccacgt
      301 agctgcgggt gtaggtggga ccatcgacgg cgccgtcttc gagacgatcc caggccgctt
      361 tctcgtacca catcacccgc tgcagggtct ctcccatatg cccttcgaac ttcagcaggg
      421 ccgccttgat ggcgcggctc aggggcaggc tctccaggag atcgtgcagc ggacggtcga
      481 tgaaggcgtc gagcatggag aagagcccgg tggtgaagta ggcgtgcggt ccgctggccc
      541 gctgcgccac cgccagttgt tcgcacatct tggcgcggac cagcgcggtg ttgatcagct
      601 cgcgcggttt gcgatcgacg cgcgtgagca gcagcaggca ggcccagttg cggatggtgt
      661 gggtgccgag aaagacgatg gcctcgcgca ccgactccac ctcccgtcgc agggcaaagc
      721 aggcggagtt cacatggcgc agcaggcgcc aggtgagccg cacgtcctgc acgatgagct
      781 gttccagctc ctccagatcg gcgtccgggt cctggagccg ggcgatgagg ctcatgatca
      841 cggattggtc agccttgccc gcccgtccct ccaccacttc ggggcgcgcc aggaaatagc
      901 cctggaaaag gtcgaacccc atgtcgcggc agcgatggta ctcctcgtgg gtctccacct
      961 tctcggccag caactgcacc gggcgttggc gcaggaaggc gtagtggtcg cgcaattcgt
     1021 ctgcgctcag ggcctgcacg tcgagtttga cgatctgcgc cagcttcagc agcggttcca
     1081 gctcggggcg gtagacgaag tcgtcgaggg cgatggtgta gccgcgctcc cggagccgtt
     1141 tcaggttcat gagcacggtg ggggtgggcg ccacatcctc cagcacctcg agcatcacct
     1201 gctcgggcgc ggcggggagg ggatagctgc cgtcgaggaa gccctcgctc aggttgatga
     1261 aggccgggtg gtgccccacc aggttctcca gccccatgtc catgatggaa ttgaccagca
     1321 catggctggt ggccacgtcg ccggagaagg gggtgcccgg cgccatctgg ccccggaaca
     1381 ggagttcgta ggcgaagagc tcaaggttgc gggtgaatat gggctggcga ccgacgtaga
     1441 tgggctccat cgcgctctca aggcatccaa aggctgtacg ccgctacttt aggattctca
     1501 ggattccttt tgtataaggg aaggtcttaa ccattacaaa gcttgatgaa aaaggtggag
     1561 tccgggaggg ggcagggcgt tcgcggggca aaaaaaagcc cggcgcgagg ccgggcttct
     1621 tttcggtttc aggcaccgga ggcggggcgc cttacttgat cttcgcttcc ttgtagacca
     1681 catgctggcg gacgacggga tcgaatttct tgatctccat cttctcgggc atggtgcgct
     1741 tgttcttggt ggtcgtgtag aagtgaccgg tgccggcgct ggagaccagc ttgatcttgt
     1801 cgcgattgct cttggccatg gtcgggctcc ttagaccttc tcgccgcggg cgcgcaggtc
     1861 ggcgaggacc gcttcaatgc ccttcttgtc gatgaggcgc atgccggcgg tgctgacgcg
     1921 caggctcacg aagcgctttt caccttcaac ccagaagcga tggttctgca ggttgggcag
     1981 aaaacggcgc ttggtcttgt tgttggcgtg ggaaacgttg tggcccgaca tggggccctt
     2041 gcccgttact tggcagactc tggacatggt ttttgcctcc ggaattcgtg ttcattcctg
     2101 cccgggagcg gccctggggc gaggagccgg cttttatacc agaacacctt caccggggca
     2161 atgccctggt gaaggtaggt tcgaggtccg aggagctggg tacgagggaa tgcgctcgct
     2221 tcgctcggaa tcttattggt ccaaacagcg tgcgcggagc gcactctttc cctcgtaccc
     2281 agctcctctg acctcgaacc tgcctcaaag aaggcccctt tccgccaacg acaccgcctg
     2341 cccgtccccg acaatgacat ggtccaggac ccggatatcc accagggcca gggcctcccg
     2401 caggcggcgg gtgatggact cgtcggcccg gctcggctcg gccacccccg aggggtggtt
     2461 gtgggccagg atcactgccg ccgcgttgtg gcccatggcc tggcggacca cctcccgggg
     2521 gtggacgctg gcgccgtcga tggtgccgtg gaagagctcc tcaaaggcga tgacccggtg
     2581 gcggttatcc aggaagagga cggcgaagac ctcctggggc cgatcccgca ggcgcagggc
     2641 caggtagcgc cgggtcgcct ccgggctgcc gaggacgtcg ccccgctcca gggtggccag
     2701 caggtggcgg cgggccagtt ccagggtggc ctggagctgc acgtacttgg cctggccgag
     2761 gccgtgggcg gcgcagaagc ggcgcgggtc ggcctccagc agcgggcgca ggccgccgaa
     2821 ggcggtgagc agctcccgcg ccaggtcgac ggcggtcttg ccgcggaccc cggtgcggag
     2881 aaagatggcg aggagctcgg cgtcggagag ggcatggggc ccccgcgcca ggagcttttc
     2941 gcgcggccgc tcctcgagcg gccagtcggt gatggccatg gaacctcctt gtgacgaccg
     3001 ggcccatcct gggcccggct tatcttctcc caatctcccc gtaggagcga gcttctgctc
     3061 gcgactctcc ggtctactgc cgcggccacc gggaaaggtc gcgagcggaa gctcgctcct
     3121 acaaacagaa acggggccgc acaggggccg aattcattta aaatggacgc ttatgcacga
     3181 actcgaaggt aagcacatac ttctcggcgt caccggcgga atcgccgcct acaaggcgcc
     3241 ggacctggtg cgccggctgc gccgcgccgg ggcagaggtg cgcgtggtca ccacccgcgc
     3301 tgccgaggag ttcgtcaccc ccctcagcct gcaggcggtc tcgggccatc cggtgcgccg
     3361 ggagatcttc gatagcgagg ccgaggcggg gatggaccac atcgccctgg cccgctgggc
     3421 cgatgcggtg ctggtggccc cggccaccgc cgatttcatg gcccgtctgg ccgccggcct
     3481 gggggatgac ctgctggcca ccctctgtct cgccaccaag gcccccatcg ccctggcgcc
     3541 cgccatgaac cacgtcatgt ggcaggcgcc ggccacccgg gaaaacgccc gttgcctgga
     3601 ggcgcgcggg atccgtctct tcggc
//
LOCUS       DATGWW010000279         1632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_430038, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000279 DATGWW010000000
VERSION     DATGWW010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430038"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..911
                     /locus_tag="VK150_04130"
     CDS             78..911
                     /locus_tag="VK150_04130"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HLP30526.1"
                     /translation="MRTTLDSLDMAYTDQGQGLPALVFVHGFPLSRGAWQKQVEALAP
                     SYRVIAPDLRGLGESQGPTGNMAGATSMARYAKDLALLIRSLGLGPVTLAGHSMGGYV
                     ALAFAERFPELLCGLVLVGTKAGADTPEGATKRRATAAKVLAEGTAAVIEDMASKMLA
                     ASNHDAAMAQQVRALMAGATPQGLASALLGMADRPDATPRLAQIKVPTLVITGADDTL
                     IPPTESELLAKGIRGAELEIIPGAGHLVAFEQPEAFNRRLAAWLAQAGRAAASALGDP
                     K"
     gene            complement(1049..1468)
                     /locus_tag="VK150_04135"
     CDS             complement(1049..1468)
                     /locus_tag="VK150_04135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30527.1"
                     /translation="MKRFLQFGAILAFVAGIVEAFKLGDPMPFVVATLNGGLYLLLAT
                     YGIRTFPRKVSLEGDSIVFHKVPTTWINIGPILVPFGITQRLVRPKSAVALEWIGRSL
                     TLNDMNEGKSIQLASGKHAEALAAWFSSIGAASPVGG"
BASE COUNT          305 a          548 c          524 g          255 t
ORIGIN      
        1 cccggggccc catattggcc cgagaggcaa caccgactcg ctgccatggt gcccgcccac
       61 ccagaaacga ggtctccgtg agaaccaccc ttgattcatt ggacatggcc tacaccgatc
      121 aggggcaggg cctgcctgcc ctggtcttcg tgcatggctt tcccctctcc cggggcgcct
      181 ggcagaagca ggtggaagcc ctggcgccca gctaccgggt gattgccccg gacctgcggg
      241 gcctggggga aagccagggc ccgacgggga acatggccgg tgccacgtcc atggcccggt
      301 acgccaaaga cctggccctg ctcatccgca gcctgggcct ggggcccgtc accctggccg
      361 ggcattccat gggcggctac gtggccctgg cctttgcgga acgcttcccc gagctgctct
      421 gcgggctggt gctcgtgggc accaaggcgg gcgccgacac gcccgagggc gccaccaagc
      481 gccgggccac ggctgcgaag gtgctggccg agggcaccgc cgccgtcatc gaggacatgg
      541 cctccaagat gctcgccgcc agcaaccacg acgccgccat ggcccagcaa gtgcgggccc
      601 tcatggccgg tgccacgccc cagggcctcg ccagcgccct cctgggcatg gccgatcgcc
      661 ccgatgccac cccgcgcctg gcccagatca aggtgcccac cctggtgatc accggcgccg
      721 acgacaccct catcccgccc acggaatccg agctgctggc caagggcatc cgcggcgccg
      781 agctggagat catccccgga gccggccacc tggtggcctt cgaacaaccc gaagccttca
      841 accgccgcct ggcggcgtgg ctggcccagg cgggacgggc ggcggcgtcg gcgttgggtg
      901 atcctaaata gcttcgcgtc ccgggaggat ctcggctttc ccatggcttt cattcgtggc
      961 ggcacggttg ccgacgcccg agccgttagg ccaattaagc ctggtccatg agcaggacca
     1021 gagcgcggtg atgacgattg cggtccgatc aaccgccaac gggactggcg gccccaatgg
     1081 aggaaaacca agccgcgagc gcctcggcgt gtttgcctga agcgagctgg atggacttgc
     1141 cttcgttcat gtcgttcagg gtcagagacc tgccgatcca ttccaacgcg accgcggact
     1201 tggggcgcac caacctctgc gtgatgccga agggcacgag tatcggtccg atgttgatcc
     1261 acgtcgtcgg gaccttgtgg aacacgatgg aatcgccttc caggctgacc tttcttggaa
     1321 aggtgcgtat cccataggtc gccaagagta ggtataggcc gccattcagc gttgcgacca
     1381 caaacggcat gggatcgcca agcttgaatg cttcgacaat gcccgcaaca aacgccagga
     1441 tcgctccgaa ctggagaaac cgcttcatga acaggaggag acccgagagt tcgatgacga
     1501 attcggagtt gggacccctg aaggtggttt cccttgagtt cacaaacgac ctaacgaaca
     1561 aggccaaccg accgcgcctg caccgagacg atgaacgtag ccgaggtagc gagaagttga
     1621 gagagagggg aa
//
LOCUS       DATGWW010000280         2011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_146325, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000280 DATGWW010000000
VERSION     DATGWW010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146325"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2011
                     /locus_tag="VK150_04140"
     CDS             <1..>2011
                     /locus_tag="VK150_04140"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HLP30528.1"
                     /translation="LARRHSPDTLAAPFDGHFQSRSLKVIPEAGNPDLEQLIAQQSAL
                     IRQVAPLWQTEQDAILDQLVRSNLSRTSYKPERVEAAAQQLDQEFKAGHFLNGCTCLL
                     LFTPDKIRSAARKDSHLPDHPFFDLCSRLHAVAQQIEEACQEKLLYHQRALGEWLRDE
                     LERRKQALNLRSYDDLLLDLHRALEGAGGERLAAGLRQRYRAALIDEFQDTDPLQWRI
                     FELLAGEGGQSGNALAASPQPELSFGTQWDPAGGLPLFLIGDPKQAIYSFRGADIHAY
                     LSAARSIDRARRWTLGTNRRSSKLLVDGVSALFRRENPFLDHAITYGAVSSGRAADQQ
                     LLRHGTPVTAPLRFWVYRRETPARAAARGAARSAAVAATAAEIAHLLDGSYELVTKQG
                     IRRALRPGDVAVLVKAHYQAELVQQALQDLSVPSVQHGDATIFETAEALDLLRILRAA
                     AEPFRSDLVREALLTGIIGLTADEVHALDRDDSAWDAWILRFRSLQEAMGSGGIMELA
                     AQLLGECGVRRQVLTHERGERRMTNILHCLDLLHQAERLQGIGLESSIVWLERRISGQ
                     EQDETYLLRLETDENAVTISTIHASKGLEYPVVFIPFAWEPPPARNGRVLFHDEQGER
                     VLDLGSDRYEENKRTAGAEQDAEAARLLYVALTRAEFLCYLSWGCI"
BASE COUNT          324 a          693 c          686 g          308 t
ORIGIN      
        1 gctggcccgg cgccacagcc ccgacaccct ggccgccccc tttgacggcc atttccagag
       61 ccgctccctg aaggtgatcc ccgaggcggg caatcccgac ctggagcagc tgatcgcgca
      121 gcagtcggcc ctgatccgcc aggtggctcc gctctggcag accgagcagg atgcgatcct
      181 ggaccagttg gtgcggtcca acctgagccg cacctcctac aagcccgagc gggtcgaagc
      241 ggctgcgcaa cagctcgatc aggagttcaa ggccgggcat ttcctgaacg ggtgcacctg
      301 cctgctgctg ttcacccccg acaagatccg cagcgctgcc cgcaaggact cccacttgcc
      361 cgatcacccc ttcttcgacc tgtgcagccg gctccatgcc gtggcccagc agatcgaaga
      421 ggcatgccag gagaagctgc tctatcacca gcgggccctg ggggaatggc tgcgggatga
      481 gctggagcgg cgcaagcagg ccctcaacct gcggagctac gacgacctgc tgctcgacct
      541 gcaccgggcc ctggagggcg ccggggggga acggctggca gcgggcctgc gccagcgcta
      601 ccgggccgca ctgatcgacg agttccagga taccgatccg ctgcagtggc ggattttcga
      661 gctgctggcc ggtgaagggg ggcagagcgg gaatgcctta gctgcgtcac cgcagccgga
      721 gctctccttc ggcacccagt gggatccggc cggcgggttg ccgctgttcc tgatcggcga
      781 tccgaagcag gccatctaca gtttccgcgg cgccgacatc catgcctacc tgtcggcggc
      841 ccgcagcatc gaccgggcgc gccgctggac cctgggcacc aaccgccgtt cgagcaagct
      901 gctggtcgac ggggtatcgg ccctgtttcg gcgcgagaat ccctttctcg accatgccat
      961 cacctacggc gcggtcagct ccggccgggc tgctgaccag cagctcctcc ggcacggcac
     1021 gccggtgacc gcaccgctcc gcttctgggt ctaccggcgc gagacaccag cccgggcggc
     1081 tgcccgggga gcagcccggt ccgctgcggt cgcggcgaca gcggccgaaa tcgcccacct
     1141 gctggacggc agctacgagc tggtcaccaa gcaggggatc cgccgtgcac tgcgccccgg
     1201 ggatgtggcg gtcctggtca aggcccacta ccaggccgag ctggtccagc aggcgctgca
     1261 ggacctgtcc gtcccgtcgg ttcagcatgg cgacgccacc atcttcgaaa ccgccgaagc
     1321 gctggacctg ctgcgcatcc tgcgcgccgc ggccgagccg ttccggagcg acctggtgcg
     1381 ggaggcgctg cttaccggca tcatcggcct gacagccgac gaggtgcatg cgcttgaccg
     1441 ggacgacagc gcctgggacg cctggattct gcgtttccgg tcgctgcagg aggcgatggg
     1501 cagcggcggc atcatggagc tggcggccca gctgctgggc gaatgcggtg tgcggcggca
     1561 ggtgctgacc catgagcggg gggagcgccg gatgaccaac atcctgcact gcctcgatct
     1621 gctccaccag gccgaacggc tgcagggcat cggactggag tcctcgatcg tctggctgga
     1681 gcggcggatc agcgggcagg aacaggacga gacctacctg ctgcgcctgg agaccgatga
     1741 gaacgcggtc acgatctcga cgatccatgc cagcaaggga ctggaatacc cggtcgtctt
     1801 cattccgttt gcctgggagc cccccccggc ccggaacggc cgggtgctgt ttcacgacga
     1861 gcagggcgaa cgggtgctgg acctgggttc ggaccgctac gaggaaaaca agcggacagc
     1921 cggagccgaa caggatgcgg aggcggcccg gctgctgtat gtggccctga cccgcgccga
     1981 gttcctctgc tacctctcct ggggctgcat t
//
LOCUS       DATGWW010000281         3287 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_21264, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000281 DATGWW010000000
VERSION     DATGWW010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3287
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21264"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="VK150_04145"
     CDS             <1..182
                     /locus_tag="VK150_04145"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HLP30529.1"
                     /translation="PDLAKCLTDLGLIDEYRIYLHPVVLGHGKPYFAGPRPPLRLLAH
                     ARIGEEVLRLTYVPA"
     gene            218..373
                     /locus_tag="VK150_04150"
     CDS             218..373
                     /locus_tag="VK150_04150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30530.1"
                     /translation="MSTRVISNLPVADLSTSLAGFKALGQAGADGSPPIRARDPADHP
                     ARMVPKT"
     gene            400..825
                     /locus_tag="VK150_04155"
     CDS             400..825
                     /locus_tag="VK150_04155"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HLP30531.1"
                     /translation="MRVMVLIKASKDSEAGALPDEKLLTDMGRFNEELVKAGVVLGGD
                     GLHPSSRGVRVHISGRNRSVVAGPFAETKDLVAGFWIWQVRSMAEAIEWAKRCPNPTG
                     DESVIELRPIFEAEDFGAEFTPELREQEARLRAATGPQD"
     gene            908..2230
                     /locus_tag="VK150_04160"
     CDS             908..2230
                     /locus_tag="VK150_04160"
                     /inference="COORDINATES: protein motif:HMM:NF042530.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HLP30532.1"
                     /translation="MIIGVIPPDIHEAIDATWRIESARLIAGLLRLVRDVSLAEEFAQ
                     DALVAALEQWPASGIPDNPGAWLMAAAKRRAIDRLRRIRMMERKHEELGRDLEAQQES
                     ALADFDAPLDDPIGDDLLRLIFIACHPVLSPGARAALTLRLLGGLTTQEIARAFLMAE
                     PAVAQRIVRAKRTLAEAQAPFEVPRGEDLKLRLESVLEVIYLIFNEGYSATSGEDWVR
                     PALCEEALRLGRILAGLIPREPEVLGLLALMEIQASRLRARMGPGGEPILLPEQNRGK
                     WDQLLIRRGLAALEQAAALGKSAGPYVLQAAIAACHARARTAEETDWPRIAALYEALA
                     QAQPSPVVDLNRAVAVGMARGPAAGLEIVEALASEPSLREYHLLPSVRGDLLMKLGRR
                     VEAREAFQRAAALARNARERTLLLGRAAACDRGEAGPPRPGKGPQDLG"
     gene            2255..2617
                     /locus_tag="VK150_04165"
     CDS             2255..2617
                     /locus_tag="VK150_04165"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HLP30533.1"
                     /translation="MTYLLLILEPRGQRLDRSPEEGRAVYDRMLRFTEDLERRGLLKA
                     SNSLRSDADGVRVEVREGRPILRDGPFSESKEMIGGFFYLDCASRDEAVAIAKSCPAA
                     EWATVEVREIAPCYDDRG"
     gene            2724..>3287
                     /locus_tag="VK150_04170"
     CDS             2724..>3287
                     /locus_tag="VK150_04170"
                     /inference="COORDINATES: protein motif:HMM:NF025168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing protein"
                     /protein_id="HLP30534.1"
                     /translation="MPLQSPDHPGFFEVLATRRAYTTLLYLLLSMVTGILAFTYTVTG
                     LSLSLGLAILILGLPVALAFLAGTRLLAVAEVHLLKALVGGDGSMGPNLLPERQSWLP
                     AGKDWLARLGTLLRDRRTWTSLLYFLLLMPLGIAYFTLFVSLLSAGLSLVAVPFAGLF
                     HATGSLSWDLGGSAWMIANPRLMAVLCG"
BASE COUNT          467 a         1221 c         1094 g          505 t
ORIGIN      
        1 ggccggacct ggcgaaatgc ctcaccgacc tcggcctgat cgacgagtac cggatctacc
       61 tgcacccggt cgtgctcggg catggcaagc cctatttcgc cggcccccgg ccgccgctcc
      121 gcctgctggc tcatgctcgg atcggcgagg aggtgctcag gttgacctac gtccccgcct
      181 agtgctcgtc ccagccaacc acaccaagga atggcccgtg agcacccgcg tcatcagcaa
      241 cctcccggtc gccgacctct ccacgtccct ggccggcttc aaggccctcg gccaggccgg
      301 cgccgacggg agccccccga ttcgagcacg agatcctgcg gaccaccctg cccggatggt
      361 accgaaaacc tgacacccac gatccctgga ggatgcacca tgcgcgtgat ggttctgatc
      421 aaggcgagca aggactcgga agccggggcg ctcccggacg agaagcttct gaccgacatg
      481 ggccgcttca acgaggagct cgtgaaggcc ggcgtggtcc tcgggggcga cggactgcac
      541 ccgagttccc ggggggtgcg ggtgcacatc tcaggccgga atcggagcgt cgtggcgggc
      601 cccttcgccg aaacgaagga cctggtcgcc gggttctgga tctggcaggt gcgctccatg
      661 gcggaagcca tcgagtgggc caagcgctgc cccaatccca cgggagatga atccgtgatc
      721 gagctgcggc ccatcttcga ggccgaggac tttggcgccg aattcacccc cgaactgcgg
      781 gagcaggaag cgcggctgcg cgccgcgacg ggcccgcagg actagcctgc cgcccactgg
      841 aggcgacatc acccgtgttc aagccgcctt ccccggcccc accttgcggc gatcgaccgg
      901 gggtgatgtg atcatcggcg tgatcccacc ggacatccat gaggccatcg acgccacctg
      961 gcggatcgaa tccgcccggc tcatcgccgg cctcctgcgc ctggtgcgcg acgtgagcct
     1021 cgctgaggaa ttcgcccagg atgcactcgt ggcggcgctg gagcagtggc ccgcctccgg
     1081 catccccgac aaccccggcg cctggctcat ggcggccgcc aagcgccgcg ccatcgaccg
     1141 cctccggcga atccgcatga tggaacgcaa gcacgaggag ctggggcggg accttgaagc
     1201 gcagcaggaa tccgcgctgg cggacttcga cgcccccctc gacgatccca tcggcgatga
     1261 cctgctccgg ctcatcttca tcgcctgcca tccggtgctc tcgccagggg cccgggcggc
     1321 cctcacgctg cgcctgctgg ggggcctcac cacccaggag atcgcccgtg ccttcctcat
     1381 ggccgaaccc gccgtggccc agcggatcgt gcgcgccaaa cggaccctcg ccgaggcgca
     1441 ggcgcccttc gaggtacccc gcggtgagga cctgaagctc cgcctggagt ccgtgctgga
     1501 ggtgatctac ctcatcttca acgagggtta ctcggccacc tccggggagg actgggtccg
     1561 gccggccctg tgcgaggagg ccctccgcct gggccgcatc ctggccgggc tcatcccccg
     1621 ggagccggaa gtcctcggcc tcctggcgct catggagatc caggcttccc gcctgcgggc
     1681 gcggatggga cccggggggg agcccatcct tctgcccgag cagaaccgcg ggaagtggga
     1741 ccagctgctg atccgccgcg gcctggcggc cctcgagcag gccgcagccc ttgggaagtc
     1801 cgcgggtccc tacgtcctgc aggccgccat cgccgcctgc cacgcccggg cccgcaccgc
     1861 cgaggaaacc gactggccgc gcatcgcggc gctctatgag gccctggccc aggcgcagcc
     1921 ctcccccgtg gtggacctga accgggcggt cgccgtgggc atggcccgcg gccccgcggc
     1981 gggcctggag atcgtggagg cgctcgcttc ggaacccagc ctacgggagt accacctgct
     2041 gccgagcgtc cggggagacc tgctgatgaa gctgggacgc cgggtcgaag cccgggaggc
     2101 cttccagcgg gcggcggccc tcgcccgcaa cgcccgcgaa cggacgctgc tccttgggcg
     2161 ggccgcggcc tgcgatcgcg gcgaagcggg ccctcccagg cctggcaagg gcccccagga
     2221 cctcggatag gatgggagcc cggagacgcg ccccatgacc tacctgctgc tgatcctgga
     2281 accgcgcggg cagcgtctgg accggagccc ggaagaaggg cgtgcggtct atgaccggat
     2341 gctgcgcttc acggaggatc tggaacgccg cggcctcctg aaggccagca actcgctccg
     2401 gtccgatgcc gatggcgtcc gggtggaggt ccgggagggc cggcccatcc tccgggacgg
     2461 tcctttttcg gagtccaagg agatgatcgg cgggttcttc tacctggact gcgccagccg
     2521 agacgaggcg gtggccatcg ccaagtcctg ccccgccgcc gagtgggcca ccgtcgaggt
     2581 gcgggagatc gccccctgct acgacgaccg gggctgaatc cgcccgccgg cccgtgcctt
     2641 ggccggtctc cgcgaaccgt tcgccggttc ccgccacccc gccccgccgc agttccgtac
     2701 cttggggaca tcccgaggtt cccatgccgc tgcagtcccc cgatcatccc ggcttcttcg
     2761 aggtgctggc cacccgccgc gcctacacga ccctgctcta cctgctgctc tccatggtca
     2821 cgggcatcct cgcgttcacc tacacggtga cgggtctctc cttgagcctg gggctcgcca
     2881 tcctcatcct cggcctcccc gtggcgctcg cgtttctggc ggggacgcgg ctgctggcgg
     2941 tcgcggaagt tcacctgctg aaagcgctcg tgggcggcga tggttcgatg ggcccgaacc
     3001 tgctgcccga acgccaaagc tggttgcccg cgggcaagga ctggctggcc cggctgggca
     3061 ccctgctccg tgaccgccgc acctggacca gcctgctcta cttcctcctg ctcatgcccc
     3121 tcggcatcgc ctacttcacc ctgttcgtga gcctcctttc cgcgggcctc agcctggtgg
     3181 ccgtgccctt cgctgggctc ttccatgcca ccggcagcct gtcctgggat ctcggcggaa
     3241 gcgcctggat gatcgccaac cccaggctga tggcggtgct ctgcggg
//
LOCUS       DATGWW010000282         2364 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_294593, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000282 DATGWW010000000
VERSION     DATGWW010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2364
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294593"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1105)
                     /locus_tag="VK150_04175"
     CDS             complement(<1..1105)
                     /locus_tag="VK150_04175"
                     /inference="COORDINATES: protein motif:HMM:NF016148.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor head protein"
                     /protein_id="HLP30535.1"
                     /translation="MTIPDRIRSSILAHQVDLLRYEAGLRRDIRDMLIELGRDLNRAL
                     IGSGVDTPRTDWQRARMRSLSKEAEKVIQETFGTISEAHLGEMGGLVRVSSAGVVSAI
                     NEALGASIMVPPKWTAEQLAAIVGNTMIEGAPSATWWERQAHGLSEKFADTIRQGLLR
                     GENIAQLRDRIMPLDIPGVDAVGKVDLRRIPAQGRGVIWDARRNAEALVRTSVISLAG
                     EAHLSAYEANADIMAGYQWCSTLDSRTTPICRALDGLRWDMNFDPIGHGFPYPGPTAH
                     WGCRSFTLPVTKTWEELAREAHGNSKLAKDLDKVEPGQRASMGGPVSGDLTYEGWFDT
                     LKKAQQEDILGPKRYALWKQGKLAFQDMVDQTGN"
     gene            complement(1102..1413)
                     /locus_tag="VK150_04180"
     CDS             complement(1102..1413)
                     /locus_tag="VK150_04180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30536.1"
                     /translation="MSQYFSPKAPMAIIKLGVEWSQALAELGDTIQSATWTITNTTDP
                     SEVTTSMFQGAVDLSKPGQVWQKVTGGTADCVYLHTCTITTVGGQVIPYAVKQTIKVP
                     A"
     gene            complement(1410..>2364)
                     /locus_tag="VK150_04185"
     CDS             complement(1410..>2364)
                     /locus_tag="VK150_04185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30537.1"
                     /translation="PSLTRALLPVAAALVLTGQVPSLTKILTPQTGSLSLAGQQPTIT
                     KGTVLTPGTGSLSLTGQVPSLSQGLTPSPGSLATSGQSPTLTQGKTPASGSLSIAGQA
                     PALTQGIIPTPGALTLAGQQPSLSAATGLTPTPGALVLAGQAPGLTIGITPQTGALGL
                     SGQAPSLTRGLTPAPGALAFSGQVPALTRGLQAATGALALAGQPPSLTRGLSPSTGAL
                     ALTGGAPALTRGITPGTAALALAGQAATLTQGITVTTGALTLAGGTPSITIWSPYELD
                     DSLVTVFLTHLAVAYVPDLLAVVPAPVHLVTAHLDYLVEVL"
BASE COUNT          347 a          743 c          889 g          385 t
ORIGIN      
        1 ggttcccagt ctggtccacc atgtcctgga atgccaactt cccctgcttc cagagggcgt
       61 agcgcttcgg gcccaggatg tcctcctgct gggccttctt cagggtgtcg aaccagccct
      121 cataggtcag gtcgccggag accggtccac ccatgctggc ccgctggccg ggctccacct
      181 tgtccagatc cttggccagc ttggaattgc cgtgggcctc gcgggcgagt tcctcccagg
      241 tcttggtgac ggggagggtg aaagaccggc atccccagtg ggccgtgggg ccagggtaag
      301 ggaagccgtg gccgatggga tcgaaattca tgtcccagcg caggccgtca agggcccggc
      361 agatgggagt ggtgcggcta tccagggtgg agcaccactg gtagcccgcc atgatgtcgg
      421 cgttggcctc gtaggcggaa aggtgggcct ccccggccag ggagatgacg gacgtgcgca
      481 ccagggcctc agcgttgcgc cgggcatccc agatcacccc cctgccctgc gctgggatcc
      541 tgcggaggtc caccttgccc acggcgtcca cccctgggat gtccaggggc atgatccggt
      601 cccggagctg ggcgatgttc tcgccccgca gtagcccttg acggatggta tcggcgaact
      661 tctcgctgag cccatgggct tggcgctccc accaggtggc cgagggcgct ccctcgatca
      721 tggtgttgcc cacgatggcg gccagctgct ccgcggtcca cttcggggga accatgatgc
      781 tggcgcccag ggcctcattg atcgccgaca caacgcccgc gctgctcacg cgcaccaagc
      841 cccccatttc gcccaggtgg gcctcggaga tggtgccgaa ggtctcctgg atgaccttct
      901 cggcctcctt ggagagggag cgcatcctgg cacgctgcca atccgtcctg ggggtgtcca
      961 ccccggagcc gatcagagcc ctgttgaggt cccggccaag ctcgatcagc atgtcccgga
     1021 tgtccctcct gaggccggcc tcgtagcgca gaagatccac ctggtgggcc aggatgctgg
     1081 agcgaattcg atccggtatc gtcacgcggg caccttgatg gtctgcttca cggcgtaggg
     1141 gatcacctgc ccgcccacgg tcgtgatggt gcaggtgtgc aggtagacgc agtcggcggt
     1201 cccgcccgtg accttctgcc acacctggcc cggcttggac aggtccacgg ctccctggaa
     1261 catggaggtg gtcacctcgc tggggtcagt ggtgttggtg atggtccatg tcgcggactg
     1321 gatggtgtcg ccaagttcag cgagggcctg gctccattcc acgcccagct tgatgatcgc
     1381 catgggcgct ttggggctga aatactggct cataggacct ccacgaggta gtcaaggtgg
     1441 gcggtgacga ggtggacggg ggcaggcacc acggccagaa gatccggcac gtaagccacg
     1501 gccaggtggg tcaggaagac cgtgaccagg gaatcgtcca gctcgtaggg ggaccagatg
     1561 gtgatgctcg gggtgcctcc ggcgagggtc agcgcccccg tggtgacggt gatcccctgg
     1621 gtgagcgttg cggcctgacc agcgagggcc agcgccgccg ttcccggggt aattccccgg
     1681 gtgagcgccg gagccccgcc cgtgagcgcg agggcgcccg tggagggcga taggccacgg
     1741 gtgaggctgg gaggctggcc agcgagtgcg agagccccag tggcagcctg gaggccccgc
     1801 gtgagggctg ggacctgccc agaaaacgcg agtgcccccg gggcgggggt gaggcccctg
     1861 gtgaggctag gcgcctgccc cgagaggccc agggccccgg tctggggggt gatgccgatg
     1921 gtgagcccag gagcctgtcc ggccagaacc agggccccag gggtgggcgt caggccggtg
     1981 gccgcgctga gggagggctg ctgccctgcg agggtgaggg ccccgggcgt ggggatgatg
     2041 ccctgggtca gggccggagc ctgcccggcg atggagaggg acccagaggc gggggtcttg
     2101 ccctgggtca gggtcgggct ctgccctgag gtcgcaaggg agccggggct gggcgtgagg
     2161 ccctggctca ggctgggaac ctggccggtg agcgacaggg acccggtgcc gggggtcagg
     2221 accgtgccct tggtgatggt cggctgctgg cccgccaggg aaagcgagcc cgtctgcggc
     2281 gtcaggatct tggtcaggct ggggacctgc cccgtcagca ccagggccgc cgccacgggc
     2341 aggagggccc tggtcaggga gggc
//
LOCUS       DATGWW010000283         1533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_247274, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000283 DATGWW010000000
VERSION     DATGWW010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_247274"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..>1533)
                     /locus_tag="VK150_04190"
     CDS             complement(35..>1533)
                     /locus_tag="VK150_04190"
                     /inference="COORDINATES: protein motif:HMM:NF012945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HLP30538.1"
                     /translation="MPGVPGTAGRVFGALARKGISVVLITQSSSELSICFAVRRADGP
                     AAVAAIEEAFPAELAAGFLDPVVLRAGLSVLSIVGDGMRTRPGVAGTFFDALAEVGCN
                     VVAIAQGASERIISAVVEEADGARAMAHIHRRFFQAQVVVDVHLLGAGNVGGSLLGQI
                     ARQHDRLLAQGLDLRVTTLATSRRMRHDARGLDLGRWREELAQGGPMDLDLLMEAVRT
                     GPPSLPVLVDCTTSGDLAARYPDLFDAGFHVVAANKKANSSSQAFHRELRERSARRGL
                     RFLYEANVGAGLPIIDTVKNLVLTGDRVLRAEGILSGSMSYILGLLGDGVPLSEAVRL
                     AKESGFTEPDPRDDLSGMDVARKLLILARELGHELELADVVVEGLLPADFDASGDIPG
                     FMARLPVLDAAFNLRLAALKAEGKTLRYVGSLSDSGCRVGLLAVDADHPFTAIKGGEN
                     ALALLTERYQPHPMVIRGYGAGAEVTAAGVLADILRLVPPGARPARRL"
BASE COUNT          231 a          568 c          538 g          196 t
ORIGIN      
        1 gtgaggcccc cctgggacat cgtgggttcc gccatcacag cctccgcgcc gggcgggcgc
       61 cggggggcac cagccgcaga atgtccgcca gcacccccgc cgccgtcacc tcggccccgg
      121 ccccgtagcc ccggatcacc atggggtgcg gctggtaccg ctccgtgagc agggccaggg
      181 cgttctcgcc gcccttgatg gcggtgaagg gatgatccgc gtccacggcc agcaggccga
      241 cgcgacaacc actgtccgaa agcgatccca catagcgcag ggtcttccct tcggccttca
      301 gcgcggccag gcggaggttg aacgccgcgt ccaacactgg gaggcgggcc atgaagccgg
      361 ggatgtcccc gctggcgtcg aagtccgccg ggagcaggcc ttccaccacc acgtccgcca
      421 gctccagctc gtggcccagc tcccgggcca ggatgagcag cttgcgcgcc acgtccatgc
      481 cgctgaggtc gtcccggggg tcgggctcgg tgaagccgct ctccttggcg aggcgcacgg
      541 cttcagacag cgggaccccg tcgcccagca ggccgaggat gtaggacatg gagcccgaca
      601 ggatgccctc cgccctcagc acccggtcgc ccgtgagcac caggttcttc accgtgtcga
      661 tgatgggcag gccggccccc acgttggcct cgtagagaaa gcgcaggccc cgccgggcgg
      721 agcgctcccg cagctcgcgg tggaaggcct gggagctgct gttggccttc ttgttggccg
      781 ccaccacgtg gaagcccgcg tcgaaaagat ccgggtaccg cgccgcgaga tcgccgctgg
      841 tggtgcagtc caccagcacc ggcagagaag gtgggcccgt gcgaaccgcc tccatgagca
      901 ggtccaggtc catgggcccg ccctgggcca gttcttcacg ccagcggccc aggtcgaggc
      961 cccgggcgtc gtggcgcatc cggcggctgg tggcgagggt ggtcacccgc aggtccaggc
     1021 cctgggccag cagccggtca tgctggcgcg cgatctgccc cagcaggctc ccgcccacgt
     1081 tccccgcgcc cagcaggtgg acgtccacca ccacctgggc ctggaagaag cgccggtgga
     1141 tgtgggccat ggcgcgggcg ccgtcggcct cctccaccac cgccgagatg atgcgctcgc
     1201 tggcgccctg ggcgatggcc accacgttgc agcccacttc ggccagggcg tcgaagaagg
     1261 tgccggccac gccgggccgg gtgcgcatgc cgtcgcccac aatgctgagc accgacagcc
     1321 cggcgcgcag caccacggga tcgaggaaac ccgcggcgag ttccgcaggg aaggcctctt
     1381 cgatggccgc caccgccgcg ggcccatccg cccggcgcac ggcgaagcag atggagagct
     1441 ccgacgagct ctgggtgatg agcaccacgg agatgccctt acgggcgagc gcgccgaaca
     1501 cgcggcccgc ggtgccgggc acaccgggca tcc
//
LOCUS       DATGWW010000284         3392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_294748, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000284 DATGWW010000000
VERSION     DATGWW010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3392
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294748"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(19..726)
                     /locus_tag="VK150_04195"
     CDS             complement(19..726)
                     /locus_tag="VK150_04195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30539.1"
                     /translation="MAQAPHPHRIGLIPEFTAARGGRLGRHLHFDDRSWNFPVPLRKG
                     ATIRTRTWDRGLRAFNQGELGSCTGNGAVGLLCTEPYRQSGARYSEALARKVYSRATR
                     DDTIVGAWPPRDTGSTVLGAMKALKALGLTRGYRWCFGLDDVLKALSTLGPVEVGLNW
                     YEGFDQPNARGLVKVRGAVRGGHAFELLGVDAERKLVWAINSWGPDWGLRGRFAFSWK
                     DLDRLLHEEGEASTVTL"
     gene            complement(951..1937)
                     /locus_tag="VK150_04200"
     CDS             complement(951..1937)
                     /locus_tag="VK150_04200"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HLP30540.1"
                     /translation="MIGQSLAFQEVVRLVARMAACDAPILIEGETGTGKELAARAIHY
                     QSPRQDRPFIPVNCGAIPDSLIESELFGHRKGAFTDAKDNQPGLITLAEGGTLFLDEV
                     DALSPKGQVTLLRFLQDQEFRPLGARQVEHGNVRVLAASNASLPALAEQGAFRADLLY
                     RLRILCLDLPPLRERAGDVAHLADWFLQACAQRFRLGTRTLHPDTLAWMDRYRWPGNI
                     RELENVLYREYLLSEGPVIRIEPPRDMDPAPLLQDAPAEGLAFNRAKARAIQAFERDY
                     LLSLMDQAHGNVSLAARLAGKERRSLGKLLKKHGLGSTAWQQRLPHEDRVPA"
     gene            2352..2633
                     /locus_tag="VK150_04205"
     CDS             2352..2633
                     /locus_tag="VK150_04205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30541.1"
                     /translation="MPTLPPSDPSALCQGILQYLRAHPEAADSLDGIVDWWLPRANHP
                     ATLEAVQEALNLLVAQRRIACLHLADGRTLYQSVDKASGQHPAWSPPKP"
     gene            2643..3182
                     /locus_tag="VK150_04210"
     CDS             2643..3182
                     /locus_tag="VK150_04210"
                     /inference="COORDINATES: protein motif:HMM:NF017638.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase 108 family protein"
                     /protein_id="HLP30542.1"
                     /translation="MNHVLEEALAFTLGNEGGYTNHPADPGGATNFGIIQRELDRWNG
                     SHPELNFPADVRDLTPQLAETIYRTNYWRWDGLADAPLAIKLFDIGVNCGTGTSVKLL
                     QRAINKLLPKPIDVDGQLGPTTLGAANAQNPAALMAALCQTQREYYQAIVDRNPSQSV
                     FLKGWLIRAARVPEVSHVL"
     gene            3172..>3392
                     /locus_tag="VK150_04215"
     CDS             3172..>3392
                     /locus_tag="VK150_04215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30543.1"
                     /translation="MSFDWKGLVKSIAPTIGTALGGPLGGIAGVALTKALGLGDAAAK
                     DETALAAAVQGASHDQLLLLKQADQEFAL"
BASE COUNT          543 a         1139 c         1161 g          549 t
ORIGIN      
        1 acggcgccga cccgggcctc acagggtcac cgtggaggct tcgccctcct cgtggagcag
       61 gcggtccaga tccttccagg aaaacgcgaa gcggccccgc aggccccagt cgggtcccca
      121 cgagttgatg gcccacacga gtttccgctc cgcatcgacg cccagaagtt cgaaggcgtg
      181 gccgccccgc acggcgccgc ggaccttgac cagcccccgg gcattgggct ggtcgaagcc
      241 ctcgtaccag ttgaggccca cctccaccgg gcccagggtc gagagggcct tcagcacgtc
      301 gtccagtccg aagcaccagc gatagccccg ggtgaggccg agggccttga gggccttcat
      361 ggcgcccagc accgtggagc ccgtgtcccg gggcggccag gcccccacga tggtgtcgtc
      421 ccgggtggcg cggctgtaga ccttgcgggc cagcgcctcc gagtaccgcg cgccggactg
      481 gcgatagggc tcggtgcaga gcaggcccac ggctccgttg ccggtgcagg aacccagctc
      541 gccctggttg aaggcgcgca ggccgcggtc ccaggtccgg gtcctgatcg tggccccttt
      601 gcgcaagggc acggggaagt tccagctgcg gtcgtcgaag tgcagatgcc ggcccaggcg
      661 gccgccccgg gccgcggtga attcgggaat caggccgatg cgatgcgggt gcggtgcctg
      721 cgccacgggg aacctcctgc cgttggatgg atgtcgtgcc ctccgagagg caatggccgc
      781 gccagttgga gttctgtaac aaaggcctgt gctcgctcgc attggtaaaa ccatgcaaag
      841 ttgctgtaag catggcttcg acccagccgg acctccccac ggcggccaag tccaagcgaa
      901 cagagactct tcccggaatg cacccaccct gggtcagaac ccacccggct tcaggcgggg
      961 acgcggtcct cgtgcgggag gcgctgctgc caggcggtgc tgccgaggcc gtgcttcttg
     1021 agcagtttgc caaggctccg ccgctccttg cccgcgagcc gggcggcgag gctgacgttg
     1081 ccgtgggctt ggtccatcag gctcagcagg taatcccgct cgaaggcctg gatggctcgc
     1141 gccttggcgc ggttgaaggc caggccttcc gcaggggcgt cctggaggag gggcgcgggg
     1201 tccatgtccc ggggcggttc gatgcggatc acgggccctt cggacagcag gtactcgcgg
     1261 tagagcacgt tctcgagctc gcggatgttg ccgggccacc ggtagcggtc catccacgcg
     1321 agggtgtcgg ggtgcagggt ccgggttcca aggcggaacc gctgggcaca ggcctgcagg
     1381 aaccagtccg ccaggtgcgc cacgtcccct gcacgctcgc ggaggggcgg caggtcgaga
     1441 cagaggatgc gcagccggta gagcaggtcg gcgcggaacg cgccctgttc ggccagggcc
     1501 ggaaggctgg cgttgctggc ggccagcacc cgcacgttgc cgtgctccac ctggcgcgcg
     1561 cccagggggc ggaactcctg gtcctgcagg aaccggagca gggtcacctg gcccttgggc
     1621 gagagggcat ccacctcgtc gaggaacagg gttccgccct cggcgagggt gatcaggccc
     1681 ggctggttgt ccttggcgtc ggtgaaggcg cccttccggt ggccgaatag ctcgctctcg
     1741 atgagggagt cggggatggc gccgcagttg accgggatga agggccggtc ctggcggggg
     1801 ctttgatagt ggatggcgcg ggccgccagt tccttgccgg tgccggtctc gccctcgatg
     1861 aggatgggcg catcgcaggc ggccatgcgg gccacgaggc ggacgacctc ctggaaggcg
     1921 agtgactggc cgatcaatgc gactcctcca atgagcctgg aaatggaccg cggaaggggt
     1981 aaccaatcag gcaatgtaga cctagtagat tgattcgcaa tatgaaaaca atgctgtttt
     2041 tttgtcaata atgctcatgt ccaacatgac caattcttcg atgcgcaatt aatcgaatcg
     2101 gatcgagtgg agctggtggg tgctcctgtc cccggggtgg gtccgggccg acccgggcct
     2161 ccgttcgccg ccaagaatcc cagcagcagc acttggattc cgcccggccc cgcggacccg
     2221 ggtcattgaa ttggtttctg tttgttttgc tgatttttta catttcaaga ccaggcatgg
     2281 gcttgccgtg agtgggattg aattggctca agggttgcca tcgctttgct gcatcgcttt
     2341 cccggtgccg catgcccacc ctgcccccct ccgatccgag cgccctgtgc caaggcatcc
     2401 tgcagtacct ccgcgcccat cccgaagccg ccgacagcct ggacggcatc gtggactggt
     2461 ggctgccgcg cgccaatcat cccgccaccc tcgaggccgt tcaggaggcg ctgaacctgc
     2521 tggtggccca gcggcggatc gcctgcctgc acctggcgga cggccggacg ctctaccaga
     2581 gcgtggacaa ggcctccggc cagcatccgg cctggtctcc ccccaaaccc taggaggctc
     2641 ccgtgaacca cgtgcttgag gaagccctgg ccttcaccct cggcaacgag ggcggctaca
     2701 ccaaccatcc cgccgatccg ggcggcgcca cgaatttcgg catcatccag cgcgagctgg
     2761 accgctggaa cggctcccac ccggaactga acttccctgc ggacgttcgg gacctcacgc
     2821 cccagctggc ggagaccatc taccggacga actactggcg ctgggacggg ctggcggacg
     2881 cgcccttggc catcaagctt ttcgacatcg gcgtgaactg cggcacgggc acctccgtga
     2941 aactgctgca gcgcgccatc aacaagctgc tgccgaagcc catcgacgtg gatggccagc
     3001 tgggccccac gaccctgggc gcggcgaacg cccagaaccc cgcggccctg atggccgcgc
     3061 tgtgccagac ccagcgcgag tactaccagg cgatcgtcga ccgcaatccc tcccagtccg
     3121 tgttcctgaa gggctggctc atccgcgccg cgcgcgtgcc ggaggtatcc catgtccttt
     3181 gactggaaag ggctcgtgaa gagcatcgcc ccgaccatcg gcaccgccct gggcggcccc
     3241 ctggggggca tcgcgggcgt ggccctcacc aaggccctgg gcctggggga cgcggcggcc
     3301 aaggatgaga cggcgctggc cgccgccgtg cagggggcga gccacgatca gctgctgctg
     3361 ctcaagcagg ccgaccagga gttcgcgctc ca
//
LOCUS       DATGWW010000285         2269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_68316, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000285 DATGWW010000000
VERSION     DATGWW010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68316"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1271)
                     /locus_tag="VK150_04220"
     CDS             complement(<1..1271)
                     /locus_tag="VK150_04220"
                     /inference="COORDINATES: protein motif:HMM:NF020459.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GSCFA domain-containing protein"
                     /protein_id="HLP30544.1"
                     /translation="MYSISAQEAFHSVMGQKDRNHHHPNQRDPRFRDGGIFPHLYPKF
                     RLTREDRIFTMGSCFARHIEDALSQHHFQVPVQAFTLPDGEMPYPAPHLLNEYNAGTI
                     AQRLRATLGDYQYPDEAGIEATTAGCLDLFLHVASRPVTRERLEARRREIDALYAQLP
                     DCDCLVLTLGLVEAWYDLQCGCYLNRAPSFRTIKRDQGRFEFRRFDAPDVVQQLQPVL
                     HALLETRLDKVLLTVSPVPMEVSFMPGDIVVNNAYSKATLRTACELLSRHEPRIDYYP
                     SYEIVTSFGVAQGFSPDGVHPKLSVVDLVISHLADHYLPHRILSRLDLERLYAAWAAR
                     GTRVLLYPAGSQAMDMLSQTPGLGACLVAFGDRDPAKQAATLHGRPVLAADAISPEDV
                     DLVLVASAQHEEAICEELRFLVARGLQVARV"
     gene            complement(1284..1631)
                     /locus_tag="VK150_04225"
     CDS             complement(1284..1631)
                     /locus_tag="VK150_04225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30545.1"
                     /translation="MAARRRVLIYPAGGHAQWFVTSNPSLLGVLTGFGDRDPLKQADG
                     LLGLPVHAPEAISLDFTDLLLIVAGDLEPELYRSLEPLTRRGIEVLCASRLHRYWRRF
                     STTEPSAPGCLRP"
BASE COUNT          386 a          684 c          845 g          354 t
ORIGIN      
        1 ctgacccggg cgacctggag gccccgcgcg accaggaacc ggagctcctc gcagatggcc
       61 tcttcgtgct gagccgaagc cacgagcacc aggtccacgt cttccggaga gatggcgtcg
      121 gcggccagaa caggccggcc atggagggtg gccgcctgct tggccggatc gcggtcgcca
      181 aaggcgacga ggcaggcgcc gaggcccggt gtctgggaca acatgtccat cgcctggctg
      241 ccggcggggt agagcaggac ccgcgtgccg cgggccgccc aggcggcgta gaggcgttcc
      301 aggtcgagac ggctgaggat ccggtgtggc aggtagtggt cggcgaggtg ggagatgacc
      361 aggtccacga ctgacagctt cggatggacc ccgtcgggcg agaagccctg cgccacgccg
      421 aaggaggtga cgatttcgta gctcgggtag tagtcgatgc ggggttcgtg ccgcgagagg
      481 agctcgcagg ccgtccgaag cgtggccttg gagtaggcgt tgttcacgac gatgtcccca
      541 ggcatgaagg agacctccat gggcacgggc gatacggtca gcagcacctt gtcgaggcgc
      601 gtctccaaga gggcatggag gacgggctga agctgctgca ccacatccgg agcatcgaac
      661 cgccggaatt cgaatcggcc ttgatcccgc ttgatggtgc ggaacgatgg cgcccggttc
      721 aggtagcagc cgcactggag gtcgtaccag gcttccacca gcccgagggt gagcaccagg
      781 cagtcgcagt ccggcagctg ggcatagagc gcgtcgatct ccctcctccg tgcctccagg
      841 cgttcccggg tgacgggccg gctggccaca tggaggaaga ggtcgaggca cccagctgtc
      901 gtcgcctcga tgccagcttc gtcggggtac tggtagtcgc ccagggtggc gcgcagacgc
      961 tgggcgatgg tgccggcgtt gtactcgttc agaagatgag gcgccgggta gggcatctcc
     1021 ccgtccggca gcgtgaacgc ttggaccggc acctggaagt ggtgctggct cagggcgtcc
     1081 tcaatgtggc gggcaaagca ggatcccatc gtgaagatgc gatcctcccg cgtgaggcgg
     1141 aatttgggat acaggtgcgg gaagatcccc ccatcccgga agcgggggtc ccgctggttc
     1201 gggtggtggt ggtttctgtc cttctgaccc atgactgagt ggaaggcttc ctgggccgag
     1261 attgagtaca tggccgcgct ccttcagggg cggagacatc cgggagccga gggctccgtc
     1321 gtggagaacc tccgccagta gcggtgcagg cggctcgcgc agagcacctc gatgccgcgg
     1381 cgggtcagcg gctccaagga tcggtagagc tctggttcga ggtcgccagc cacgatgagc
     1441 agaaggtcgg tgaaatcgag ggagatcgcc tcgggggcgt ggaccgggag gccgagcagg
     1501 ccgtcagcct gcttgagggg atcgcgatcc ccaaaacctg tcaggacgcc gaggagggac
     1561 ggattcgacg tcacgaacca ctgggcatgg ccgccggctg gatagatcag cacccttcgg
     1621 cgggcggcca tccaggcctc gatgatgctt tggatctctt gctgtgttgg gggaggctct
     1681 ggcgccggaa tcctcccggc atgacgttcg acgagggcgt tgagctcccc cggtgatccc
     1741 cacggcgcgc tcgggcaggt cctgcagacg gcggcgaggt tcccggccag cagctccgcg
     1801 cgcctttgcc gcattccagg gatattcagg gtctctgctg gcgtgaactc cgtgccatgt
     1861 cctaccgggg caggatccat cgcacacggg tagagatcgc cggcaggtcc ccacacggca
     1921 ccctcccagg gatccaggca gactcgcgtg tctcctggag gctggccgcc ggggcggaag
     1981 gcgggcgtcg ggggaaccga gacgaccctc ggcgtgcgga ggccggcctg atcgcggcgg
     2041 gacagcaggt ggcgcaaatg gtcggcggag gagggatcct ccctatcagc cgggatctga
     2101 agctcttcca ggcggctcag gaggtcaagc tgggcggggg tgaggacgcc aggcaggctg
     2161 gtgcgcagga gacagcggaa ccccgccctc aagaaggggc cgatgattcc ctcccagccg
     2221 ggtgacgaca gggcgtcagg ggcgccggaa aaccctaccc attcgatgc
//
LOCUS       DATGWW010000286         2273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_21473, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000286 DATGWW010000000
VERSION     DATGWW010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21473"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..260)
                     /locus_tag="VK150_04230"
     CDS             complement(3..260)
                     /locus_tag="VK150_04230"
                     /inference="COORDINATES: protein motif:HMM:NF006617.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HLP30546.1"
                     /translation="MSDLKLRVKEMIIERLKLEGMTPDQMDDGAPLFGEGLGLDSIDA
                     LELVLGIEQVFGVKIEDEAAGMKAFKSIQALTDFIAEHSKA"
     gene            401..781
                     /locus_tag="VK150_04235"
     CDS             401..781
                     /locus_tag="VK150_04235"
                     /inference="COORDINATES: protein motif:HMM:NF012717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HLP30547.1"
                     /translation="MANPASPFLPVLILLLVAAVTAAAILVLSGKVLPLLKPNNPQAA
                     KLRPYECGVAPQQEGARHKYSVKFYLTAMLFILFDVEAAFLLPWAVNFKHALWTFAAM
                     LSFMATLLVGFIYAWGKGAFEWER"
     gene            784..1392
                     /gene="nuoB"
                     /locus_tag="VK150_04240"
     CDS             784..1392
                     /gene="nuoB"
                     /locus_tag="VK150_04240"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF005012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HLP30548.1"
                     /translation="MSEMNINDAVMTTRLDAVVNWGRKNSLWPLPFGTACCAIEFMSM
                     MASRYDMSRFGAEAMRFSPRQSDMMLILGTITNKMAPVLRTIYAQMAEPKWVVSVGVC
                     ASSGGMYRTYATLQGVDRVIPVDVYVPGCPPRPESMIYGVMKLQEKIEKESLSMRKDH
                     IARFYESLARQEAIQAEKGLTGQQTIRDMLMDAAERGAGTIF"
     gene            1405..1908
                     /locus_tag="VK150_04245"
     CDS             1405..1908
                     /locus_tag="VK150_04245"
                     /inference="COORDINATES: protein motif:HMM:NF012549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HLP30549.1"
                     /translation="MIIEHIDAQLPGAITDRHAFRGDQTIVVPKANLLDLVDLLHREG
                     FQLLVDITAVDWPERPESQGVGRFDVVYHWLNLASQERLRVKVAVADGEAMPTLTGRF
                     KTADWFEREIFDLFGIRFEGHPNMKRLLTWDDFPGHALRKDFPLDGGDPFCMEGCTAP
                     YNNGERA"
     gene            1919..>2273
                     /locus_tag="VK150_04250"
     CDS             1919..>2273
                     /locus_tag="VK150_04250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30550.1"
                     /translation="MESIAMTRQQLDGDHMIVNLGPSHPTTHGTLRIILELEGETILK
                     ATPEIGYLHRGVEKLGENLSFQQFIPLTDRLNYCSSIMNNVGYACAVEKLLGIEIPKR
                     AQQIRVLVSELARVAD"
BASE COUNT          396 a          795 c          697 g          385 t
ORIGIN      
        1 gctcaggcct tgctgtgctc agcgatgaag tcggtgaggg cctggatgga cttgaaggcc
       61 ttcatgcccg cggcctcgtc ctcgatcttc acgccgaaga cctgctcgat gcccagcacc
      121 agctccagcg cgtcgatgga atccaggccc agcccctcgc cgaacagggg cgccccgtca
      181 tccatctggt cgggcgtcat gccctcgagc ttcaagcgct cgatgatcat ctccttgacg
      241 cgcagcttca gatcgctcat gggtttcctg gcagaagggt gggaggggcc attctatacc
      301 cggggcgcgg gggccccggt gcttgtgatc ttgacacagc ccccgggccc tcaaagggcg
      361 ctaagctgtt tgttcgcgga accctccgcc cgagagcgcc atggccaatc ccgcatcgcc
      421 cttcctgccg gtcctgatcc tgcttctggt cgccgccgtg acggccgccg ccatccttgt
      481 cctgtcgggc aaggtgctgc cgcttctgaa gccgaacaac ccgcaggcgg cgaagctgcg
      541 tccctacgag tgcggcgtgg ccccccagca ggagggcgcc cggcacaagt actcggtgaa
      601 gttctacctg accgccatgc tcttcatcct gttcgacgtg gaagcggcct tcctgctgcc
      661 ctgggcggtg aacttcaagc acgccctctg gaccttcgcg gccatgctga gcttcatggc
      721 caccctgctc gtgggcttca tctacgcctg gggcaagggc gccttcgagt gggagcgttg
      781 accatgtctg aaatgaacat caacgatgcc gtgatgacca cccgactgga cgccgtggtc
      841 aactggggcc gcaagaacag cctgtggccg ctgcccttcg gcaccgcctg ctgcgccatc
      901 gagttcatga gcatgatggc ctcccgctac gacatgagcc gcttcggcgc cgaggccatg
      961 cgcttcagcc cccgccagag cgacatgatg ctgattcttg gcaccatcac caacaagatg
     1021 gccccggtgc tgcgcacgat ctacgcccag atggccgagc ccaagtgggt ggtttccgtg
     1081 ggcgtctgcg cctcctccgg cgggatgtac cgcacctacg ccaccctgca gggcgtggac
     1141 cgggtgatcc ccgtggacgt ctacgtgccc ggctgcccgc cgcggcccga gagcatgatc
     1201 tacggcgtaa tgaagctcca ggagaagatc gagaaggaat ccctctccat gcgcaaggac
     1261 cacatcgcgc ggttctacga gagtctggcg cggcaggagg ccatccaggc ggagaagggc
     1321 ctcacgggcc agcagaccat ccgcgacatg ctgatggacg ccgccgagcg cggcgccggc
     1381 acgatcttct aggcggggcg gaccatgatc atcgagcaca tcgacgcaca gctccccggc
     1441 gccatcaccg accggcacgc cttccgcggc gaccagacca tcgtggtgcc gaaggccaac
     1501 ctcctcgact tggtggacct gcttcaccgg gagggcttcc agctgctggt ggacatcacc
     1561 gccgtggact ggccagaacg cccggaatcc cagggcgtgg gccgattcga cgtggtctac
     1621 cactggctca acctcgcgag ccaggagcgc ctgcgcgtga aggtggccgt cgccgacggc
     1681 gaggccatgc ccaccctgac cggccgcttc aagaccgccg actggttcga gcgcgagatc
     1741 ttcgacctct tcggcatccg cttcgagggc cacccgaaca tgaagcgcct gctcacctgg
     1801 gacgacttcc ccggccacgc cctgcgcaag gacttccctc tggatggcgg ggatcccttc
     1861 tgcatggaag gctgcacggc tccctacaac aacggcgaac gggcctgagg acacgaccat
     1921 ggaatccatc gccatgaccc ggcagcaact cgacggcgat cacatgatcg tcaacctggg
     1981 gccgtcgcat cccacgaccc acggcaccct gcgcatcatc ctcgagcttg agggcgagac
     2041 gatcctcaag gccactcccg agatcgggta cctccaccgc ggcgtggaga agctgggcga
     2101 gaacctcagc ttccagcagt tcatccccct cacggaccgt ctcaactact gcagctccat
     2161 catgaacaac gtgggctatg cctgcgcggt ggagaagctg ctgggcatcg agatccccaa
     2221 gcgggcgcag cagatccggg tgctggtctc cgagctggcg cgcgtggccg atc
//
LOCUS       DATGWW010000287         1925 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_146551, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000287 DATGWW010000000
VERSION     DATGWW010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1925
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146551"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..678
                     /locus_tag="VK150_04255"
     CDS             <1..678
                     /locus_tag="VK150_04255"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HLP30551.1"
                     /translation="SRFVSVRFGNVLGSRGSVVPIFQEQIERGGPVTVTHPDMTRYFM
                     TIPEASQLVLQAGLLGETGKVYVLDMGEAVKISDLATDMVKLAGLTPGRDIEIQYMGL
                     RPGEKLHEELFLDQERQSTELHAKVFEANPQGISSEKLLEGLDGFRKAVNLPFQQRQP
                     EIVRLLQWMVPTYTPSLLGVGRYGGFAWNRRQSNRPLPPKVACRRKNPPPNDATAPWL
                     VQNKTKI"
     gene            752..>1925
                     /locus_tag="VK150_04260"
     CDS             752..>1925
                     /locus_tag="VK150_04260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30552.1"
                     /translation="MNQVLPGSIASQPFDRRLRQGFAALCLVVLGLACGSKAEEATAT
                     QPPPPPPPPPPTNTLKEIYVAPNGLAANPGTQAAPTTLEGAQALVRSTARGSAGVIRV
                     LLRGGLYPRTASLALTAADSGSASNPVEWAAYTGETPRLVGGVSLSPQALRLVDATDP
                     NWSRLDATARPQIYVADLTAFKAGMGSLGSRVGGSGDVNRAMEVFADGAPCTLARYPK
                     AVDPGSVVLATQATVRVSGTISPDATGDYAYKGTDSRGFPYYQLVKDAETWSIAVTSS
                     GADWYLSNRRDLGGKGTAASWGTYESFAGPVGRFDPASGAASGQALLGRADGSLPMPG
                     HLLIQSTNGSSQIQVSEPRMSLWRASEAMYYGAGYYTWAASHCAISSLAPATGTIQL"
BASE COUNT          310 a          687 c          642 g          286 t
ORIGIN      
        1 tcgcgcttcg tgagcgtccg cttcggcaat gtgctgggca gccggggcag cgtcgtgccc
       61 atcttccagg agcagatcga gcggggcggg cccgtcaccg tgacccatcc cgacatgacc
      121 cggtatttca tgacgattcc cgaggccagc cagctggtgc tgcaggcggg cctcctgggc
      181 gagacgggaa aggtctacgt gctcgacatg ggtgaagccg tgaagatttc cgatctcgcc
      241 acggacatgg tcaagctcgc ggggctcacg ccgggccggg acatcgagat ccagtacatg
      301 ggcctgcggc cgggcgagaa gctgcacgag gagctcttcc tcgaccagga gcgccagagc
      361 acggaactgc acgcgaaggt cttcgaggcg aacccccagg gcatcagctc cgagaagctg
      421 ctggaagggc tcgacggttt ccgcaaggcc gtcaacctcc ccttccagca gcggcagccg
      481 gaaatcgtcc gcctgctcca gtggatggtg cccacctaca cgccttccct tctcggcgtg
      541 ggccggtacg gcggcttcgc ctggaatcgc cgccagtcga accgtccgct tccgcccaag
      601 gtggcctgcc ggcgcaagaa tccgccgccc aacgacgcga ccgcgccctg gctggtccag
      661 aacaagacca agatctgatc ccaccggacg ccctgaacgc ctgggcggtc cagccgccca
      721 tcatccagaa ctcacggaat ggaggtggcc gatgaaccaa gtccttcccg ggagcatcgc
      781 ctcgcaaccg tttgaccgcc gcctgcgcca aggcttcgcg gccctctgcc tggtcgtcct
      841 cgggctggcc tgcggcagca aggcggagga ggcgactgcc acccagccgc cgcctcctcc
      901 gcctccgcct ccacccacca acaccttgaa ggaaatctac gtcgccccca atgggctggc
      961 cgcgaacccg ggcacccagg cggcgccgac caccctggag ggggcgcagg ccctcgtccg
     1021 cagcacggcg cggggcagcg ccggggtgat ccgcgtgctg ctccggggcg gcctctatcc
     1081 ccgcacggcg agcctcgcgc tcacggcggc cgattcgggc tctgcctcga atcccgtgga
     1141 gtgggccgcc tacaccggcg agactccccg cctcgtgggc ggcgtatcgc tgagtcccca
     1201 ggctctgcgt ctcgtggatg ccaccgatcc gaactggtcg aggttggacg ccacggcgcg
     1261 tccgcagatc tacgtggcgg atctcaccgc cttcaaagcc ggcatgggca gcctgggcag
     1321 ccgggtcgga ggcagtggcg acgtgaaccg tgccatggag gtcttcgccg acggggcgcc
     1381 ctgcacgctg gcccggtacc ccaaggcggt ggatcccggg tcggtggtcc tcgcgaccca
     1441 ggccacggtg cgggtctcag gcaccatttc gccagacgcg acgggggact acgcctacaa
     1501 gggaaccgac agccgcggat ttccctacta ccagttggtg aaggacgcgg agacctggtc
     1561 catcgccgtc acgagcagcg gcgcggattg gtacctctcg aaccggaggg atctgggcgg
     1621 gaagggcacc gccgcctcct ggggaaccta tgagagcttc gcagggccgg tggggcggtt
     1681 cgacccggcc tccggcgcgg cctccggcca ggccctgctg gggcgggccg acggttccct
     1741 gccgatgccc ggtcacctgc tcatccagag caccaacggc agttcacaga tccaggtgag
     1801 tgaaccccgg atgagcctgt ggcgggcctc cgaggccatg tactacgggg ctggctacta
     1861 cacctgggcc gccagccact gcgcgatctc ctcgctggct cccgcgacag gcacgattca
     1921 gctgg
//
LOCUS       DATGWW010000288         5095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_146721, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000288 DATGWW010000000
VERSION     DATGWW010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5095
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146721"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..437)
                     /locus_tag="VK150_04265"
     CDS             complement(<1..437)
                     /locus_tag="VK150_04265"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HLP30553.1"
                     /translation="MPSRDPAILPSWDVQGWRNHVWVLGLAVVFLGAATLPLASGLAF
                     QAYLFWPAAAVSHTALFILGGRAWWGIALGSLILNSLGWLPWPHALAMVALQTLEPLV
                     AWRIMQRLGCPHPDLGKYQDLARWLTVALFVNAVFSAGFGNWVV"
     gene            complement(444..1682)
                     /gene="glyA"
                     /locus_tag="VK150_04270"
     CDS             complement(444..1682)
                     /gene="glyA"
                     /locus_tag="VK150_04270"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: protein motif:HMM:NF000586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HLP30554.1"
                     /translation="MYEVIRTSDPAVFQALELEVQRQRHHLELIASENYASRAVMQTM
                     GSHFTNKYAEGYPGKRYYGGCSQVDIIENLARDRAKQIFGAEHVNVQPHSGAQANMAV
                     YLAALKPGDTVMGLDLAHGGHLTHGHPLNSSGILYKFVPYHVRKEDEVVDMDEVRTLA
                     LQHKPKMIVVGASAYSRTWNFPLFRQICDEVGALLMVDMAHIAGLVATGHHPSPVPHA
                     DFVTTTTHKTLRGPRGGMIMCKQQYAKDLDRSVFPGVQGGPLMHVIAAKAVAFHEILQ
                     PEFKAYSGQVIRNAHALAKGLQERGWRIVSGGTDNHLFLVDLRDHGLLGHEAEECLQR
                     AGMTTNKNGIPFDPNPPLKPSGVRLGSPALTTRGMKEEEMDHIARFFDLTLRHRADDS
                     TFARVRQEVFHLTDQFPIPE"
     gene            1801..3252
                     /gene="purB"
                     /locus_tag="VK150_04275"
     CDS             1801..3252
                     /gene="purB"
                     /locus_tag="VK150_04275"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HLP30555.1"
                     /translation="MSFLPPHDGPELERFEHPLASRYASKGMVRLLSPLYRQRVWRRL
                     WVALAEAESELGLPVTAAQIQALKATQDDVDFEAIARHEAALRHDVMAAIHAWGEQAP
                     AARPIIHLGATSCFVTDNGDLLIVQEALALLRRRLQDVLAALAGFAAQWQDQPTLGFT
                     HFQPAQPTTVGKRATLWIQDLLLDLEDLDHLIRTTPIRGVKGTTGTQASFLELFGGDG
                     TKVEALEQRFCEKVGFPAIPVSGQTATRKLEDRIGQVLCGIAASASKFACDLRLLQHL
                     KEVEEPFESKQIGSSAMPYKRNPMRSERINSLARFVLGLMPSSYQTSATQWMERTLDD
                     SAHRRLTISQGLLATDAILVLLRNVASGLVVYPRMIEARLSQELPFMAAEVLLMEAVK
                     RGGDRQDLHERFRVAALEAGRRIKAEGRPNELLQLLAEDPAWAMTEAELAALLDAGRF
                     TGRAGEQVRQFLAGPVAAALKDHTPADEASVRV"
     gene            3269..4099
                     /locus_tag="VK150_04280"
     CDS             3269..4099
                     /locus_tag="VK150_04280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30556.1"
                     /translation="MLKLAVIGAQTLLGRELVGALEARDASVVPLSIGALTVEEEVGD
                     LVVFAPTPLLLEGLDAVILADTPDMALLEGFPGRILDLRSEPEARVTPMPLAGPWPKG
                     EKSLRGRPALEQVLALLPTLLKGLGDVGGTHLRSVAWMGDRGLDGLVEQTLAVLNGED
                     PDLAKLGYRQAFEVVPVAPAAGKGRLLEIRVPSFHGDLLVLQIRAAEGQSLAKNAAPA
                     GVSWVDAPPSSRDVAVSADLLAHLDLAPDGKAGMLTLGFDPVLWGILRPTMRVLGMMD
                     "
     gene            4107..4754
                     /locus_tag="VK150_04285"
     CDS             4107..4754
                     /locus_tag="VK150_04285"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HLP30557.1"
                     /translation="MAKKLDEPQERGDFFKSLGTLFAGFMADRVSEAVTSLGPKLLRP
                     PGALEELEFLTKCTRCDKCVRACPENAILKAPPTAGLAMKTPYLDPRSIPCFLCTTLP
                     CIAECDDEALVWPRLTLADGTELEGPKAVRMGTARIKPSLCVTWGTDDREARACQVCV
                     DRCPYPDEAIRIAAPAEGRTVGHPEVVAEACTGCGLCVFACPAEPGAIAVEPRRD"
     gene            complement(4759..>5095)
                     /locus_tag="VK150_04290"
     CDS             complement(4759..>5095)
                     /locus_tag="VK150_04290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30558.1"
                     /translation="LAHAKTLGTALFGPAFRTKSGLMLGLGETEAELLTTFEALAANG
                     VDILTLGQYLRPTRHQLPVKRYVPPEEFAALGAKAKAFGFATVYAGPLVRSSFNAHEV
                     SEMDGISIA"
BASE COUNT          769 a         1733 c         1816 g          777 t
ORIGIN      
        1 accacccagt tgccgaagcc cgcggagaac acggcgttga cgaagagggc caccgtcagc
       61 cagcgggcca gatcctggta cttccccaga tccgggtggg ggcagccgag acgctgcatg
      121 atgcgccagg caaccagggg ctccagggtc tggagcgcga ccatggccag ggcgtggggc
      181 cagggcagcc atcccaggct gttgaggatg aggctgccca gggcgatgcc ccaccaggcc
      241 cgcccgccga ggatgaagag ggccgtgtga gagacggctg ccgcgggcca gaagaggtag
      301 gcctggaaag cgagccccga ggcgagcgga agggtggcag cgccaaggaa tacgacagcc
      361 aggcccaata cccacacgtg gttgcgccag ccctgcacgt cccaggaagg gaggatggcc
      421 ggatcccggg acggcacgga gctctactcg ggaatgggga actggtccgt gaggtggaag
      481 acttcctggc ggacccgggc gaaggtgctg tcgtcggcgc gatggcggag ggtgaggtcg
      541 aagaaccgcg cgatatggtc catctcctcc tccttcatgc cgcgggtggt gagggcgggg
      601 ctccccaggc gcacgccgga gggcttgagg ggcgggttcg ggtcgaaggg gatgccgttc
      661 ttgttggtgg tcatgcccgc gcgctggagg cactcctcgg cctcgtggcc caggagtccg
      721 tggtcgcgca ggtccaccag gaacaggtgg ttgtccgtgc cgccactcac gatgcgccag
      781 ccccgctcct gcaggccctt ggccagggcg tgggcgttgc ggatgacctg gccgctgtag
      841 gccttgaact cgggctgcag gatctcgtgg aacgccacag ccttggcggc gatcacgtgc
      901 atgagggggc cgccctgcac gccggggaac acggagcgat ctaagtcctt tgcatactgt
      961 tgtttgcaca taatcatgcc gccacggggg ccccgcaggg tcttgtgggt ggtcgtcgtg
     1021 acgaaatccg cgtggggcac cgggctcgga tggtgtcccg tggcgaccag gccggcgatg
     1081 tgggccatgt ccaccatgag cagggccccg acctcatcgc agatctggcg gaagaggggg
     1141 aagttccagg tgcggctgta ggcggaggcg cccacgacga tcatcttcgg cttgtgctga
     1201 agggccaggg tgcggacctc gtccatgtcc accacctcgt cctccttgcg gacgtgatag
     1261 ggcacgaact tgtagaggat gccggagctg ttcaagggat ggccgtgggt caggtggccg
     1321 ccgtgggcca ggtcgaggcc catgaccgtg tccccgggct tcagggcggc gaggtagacg
     1381 gccatgttcg cctgggcgcc gctgtggggc tgcacgttga catgctcggc cccgaaaatc
     1441 tgcttggccc ggtcccgggc caggttctcg atgatgtcga cctggctgca gccgccgtag
     1501 tagcgcttgc ccgggtagcc ttccgcgtac ttgttcgtga agtgcgagcc catggtctgc
     1561 atcacggccc gggacgcgta gttctccgag gcgatgagct ccaggtggtg ccgctggcgc
     1621 tggacttcca gctccagggc ctggaacaca gcggggtcgg aggtgcggat cacttcatac
     1681 atggcggggg ctcccgggtg atgcccctat cctagccggt gcccgcggac gccaagggtg
     1741 cttatccgtg agcgggatca cagctcaggg cctatgcgac actggagggc cggagatccc
     1801 atgtccttcc ttccgcccca cgacggaccc gagctggagc gattcgaaca tcccctggcc
     1861 agccgctatg ccagcaaggg catggtgcgg ctgctgtcgc ccctctaccg ccagcgggtc
     1921 tggcgccgcc tctgggtggc cctcgccgaa gcggaatccg agcttgggct gccggtcacc
     1981 gccgcgcaga tccaggcgct gaaggccacc caggacgacg tggatttcga ggccatcgcc
     2041 cggcacgagg ccgccctccg ccatgacgtc atggccgcca tccacgcctg gggcgagcag
     2101 gcgccggccg cccggcccat catccacctg ggcgccacca gctgcttcgt caccgacaac
     2161 ggcgacctgc tcatcgtgca ggaggccctg gccctgctgc gccgccgcct gcaggacgtg
     2221 ctcgcggcgc tggcgggctt cgccgcccag tggcaggatc agccgaccct gggctttacg
     2281 cacttccagc ccgcccagcc caccaccgtg ggcaagcggg ccaccctgtg gatccaggac
     2341 ctgctcctcg acctggagga tctcgaccac ctcatccgca ccacccccat ccggggcgtc
     2401 aagggcacca cgggcaccca ggcgagcttc ctggagctgt tcgggggcga tggcaccaag
     2461 gtggaggcgc tggagcagcg cttctgcgag aaggtgggct tccccgccat tccggtctcg
     2521 ggccagacgg ccacccgcaa gctggaagac cgcatcggcc aggtgctctg cggcatcgcg
     2581 gccagtgcct cgaagttcgc ctgcgacctg cgcctcctcc agcacctgaa ggaagtggag
     2641 gagcccttcg agagcaagca gatcggctct tccgccatgc cctacaagcg caatcccatg
     2701 cgctcggagc gcatcaacag cctcgcccgc ttcgtgctgg gcctcatgcc ctcgagctac
     2761 cagaccagtg ccacgcagtg gatggagcgc accctggacg acagcgccca ccgccggctc
     2821 accatcagcc agggactgct ggccacagac gccatcctgg tgctgcttcg caatgtcgcc
     2881 tcgggcctgg tggtctaccc gaggatgatc gaggcgcgcc tgtcgcagga actgcccttc
     2941 atggccgccg aggtgctgct catggaggcc gtcaagcggg gcggcgatcg ccaggatctg
     3001 catgagcggt tccgggtggc ggcgctggag gcgggccggc gcatcaaggc cgagggccgt
     3061 cccaacgagc tgctccagct gctggcggaa gatccggcct gggcgatgac cgaggccgag
     3121 ctcgccgcgc tgctggacgc cggccgcttc actggccggg ccggggagca ggtgcgccag
     3181 ttcctggcgg gccccgtggc cgcagcgctg aaggaccaca cccccgccga cgaggcctcc
     3241 gtccgcgttt gagatcgaaa ggttcgccat gctgaaactc gccgtcatcg gtgcccagac
     3301 cctgctgggt cgtgaactcg tgggcgccct ggaagcccgg gacgcctccg tggtgcccct
     3361 ttccatcggg gcgctcacgg tggaagagga ggtgggcgac ctggtggtct tcgccccgac
     3421 cccgctgctg ctggagggcc tggacgcggt gatcctggcg gatacccccg acatggccct
     3481 gctggagggg ttcccgggcc gcatcctcga cctgcggtcg gaacccgagg cccgggtcac
     3541 ccccatgccc ctggcgggcc cctggccgaa gggcgagaaa tccctgcggg gccggccggc
     3601 cctggaacag gtgctggccc tcctgcccac cctgctgaag gggctgggcg acgtgggggg
     3661 cacccacctg cgctcggtgg cctggatggg cgaccgcggc ctggacggcc tggtggagca
     3721 gaccctcgcg gtgctcaacg gcgaagaccc cgacctggcc aagctgggct accgccaggc
     3781 cttcgaggtg gtgcccgtcg cccccgccgc cgggaagggg cggctcctgg agatccgtgt
     3841 gccctccttc cacggggacc tgctggtgct gcagatccgc gcggcggaag gacagtctct
     3901 ggcgaagaac gctgcgcctg ccggcgtgag ctgggtggat gccccgccca gttcccgcga
     3961 cgtggccgtg agcgccgacc tgctggcgca cctggacctg gcccctgacg gcaaggcggg
     4021 catgctcacc ctgggcttcg atcccgtgct ctggggcatc ctgcggccca ccatgagggt
     4081 gctcggcatg atggattgaa ggcggcatgg ccaagaagct cgacgaaccc caggagcgcg
     4141 gggacttttt caagtccctg ggcaccctgt tcgccggatt catggcggac cgcgtgagcg
     4201 aggccgtgac gagcctcggc cccaagctgc tccgcccccc cggcgccctc gaggagctgg
     4261 aattcctcac caagtgcacc cgctgcgaca agtgcgtgag ggcctgcccg gagaacgcca
     4321 tcctcaaggc accgcccacc gccggcctcg ccatgaagac gccctacctg gatccccgca
     4381 gcatcccctg cttcctctgc accaccttgc cctgcatcgc cgagtgcgac gacgaggccc
     4441 tggtctggcc ccggcttacg ctcgccgacg gtacggagct ggagggtccg aaggcggtcc
     4501 gcatggggac ggcccgcatc aagcccagcc tctgcgtcac ctggggaacc gacgatcggg
     4561 aggccagggc ctgccaggtc tgcgtggacc gctgccccta cccggacgag gccatccgca
     4621 tcgcggcccc cgccgagggc cgcaccgtgg gccatcccga ggtggtggcc gaggcatgca
     4681 cgggttgcgg cctctgcgtg ttcgcctgtc cggccgagcc cggtgccatc gccgtggagc
     4741 cgcgccgcga ctagggcctc aggcgatgct gatgccatcc atttcggaca cctcgtgggc
     4801 gttgaagctg gagcggacca ggggcccggc gtagacggtg gcgaagccga aagccttggc
     4861 cttggcgccg agcgcggcga actcctcggg gggcacgtag cgcttcacgg gcagctggtg
     4921 gcgggtgggg cgcagatact ggcccagggt gaggatgtcc acgccgttgg cggccagggc
     4981 ctcgaaggtg gtcaggagct cggcctcggt ctcgcccagg cccagcatga gcccgctctt
     5041 ggtgcggaag gcggggccga agagggcggt gcccagggtc ttggcatggg ccagc
//
LOCUS       DATGWW010000289         2447 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_68700, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000289 DATGWW010000000
VERSION     DATGWW010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2447
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68700"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..343
                     /locus_tag="VK150_04295"
     CDS             <1..343
                     /locus_tag="VK150_04295"
                     /inference="COORDINATES: protein motif:HMM:NF019303.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HLP30559.1"
                     /translation="ARSLTLHWDHPVDPAALEALLLAPPAEGELLRAKGVCAFAGWAV
                     RNDGSDRWAFQLADGRLEISPLPPMADGSAAPRAAVVIGTGLDALHWKKALRNLERPA
                     EGQRRKVVLDR"
     gene            447..>2447
                     /locus_tag="VK150_04300"
     CDS             447..>2447
                     /locus_tag="VK150_04300"
                     /inference="COORDINATES: protein motif:HMM:NF020928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tex family protein"
                     /protein_id="HLP30560.1"
                     /translation="MDQVLDLMAKELKLPRAGVAAIVALLEEGNTVPFIARYRKEATG
                     SLDEVAIRAVEDRHAYYKDLLDRRKTVLKSIDEQGKLTPELKTKIETTWVKAELEDLY
                     LPYKPKKRTKATVARERGLEPLLDSLLADDSGADPFLICEPFIKDEDGLRSPSECMEG
                     AGHILAERMAEDAAIRAWLRLEFHEHGVMKSEIREERKTDQAALRFKPYFDFSEPIRK
                     IPSHRLLALRRGEKEEILTVKLLSDRESLVTQLVSKIQVNPGSGYRRFLHDVAGDAFD
                     RLLAPTIESEVRYEAKKKADAEAIKVFQTNLDHLLLAPPAGQRCTLGVDPGIRTGCKL
                     VVINRLGQLVQNEVIYPLEPKRDLEGSRAILEKLCTENPVEAIAIGNGTGGREVEAFI
                     REWLKETNRTGLICVSVSEAGASVYSASDIAREEFPEHDVTVRGAVSIARRFQDPLAE
                     LVKVDPKSIGVGQYQHDVNQTALKKGLDDVVESCVNRVGVDLNSASYKLLAYVAGIGE
                     GLAKSIVTHRFEHGAFKRREQLMDVSRFGAKAFQQAAGFLRIHDGDDPLDASAVHPES
                     YPVVQRICQLAGKTVPELIGNDAVLDALDPKLLVDETFGVETVKDILAELKKPGRDPR
                     HRFEIVQFREGVNKPSDLEIGMELQGIVTNVTDFGAFVDVGVH"
BASE COUNT          429 a          876 c          803 g          339 t
ORIGIN      
        1 ggcccgctcg ctcaccctgc actgggacca cccggtggat cccgccgccc tggaggcgct
       61 gctgctcgcg ccccccgccg aaggagagct gctgcgggcc aagggcgtgt gcgccttcgc
      121 gggctgggcc gtgcggaacg acggcagcga tcgctgggcc ttccagctcg cggacggacg
      181 cctggagatc tcgcccctgc cccccatggc cgacggctcc gccgcgcccc gcgccgccgt
      241 cgtgatcggc accggcctcg acgccctcca ctggaagaag gccctgcgga acctcgagcg
      301 tcccgccgag ggccagcggc ggaaggtcgt gctggaccgc tgatccagat cgtccccagg
      361 gaaggatccg accccgccag aagccagatc cgccctgcct tggtatcatc gctctttccc
      421 tcatccgggg accgcaagga gcaggtgtgg atcaagtgct cgacctcatg gccaaggagc
      481 tcaagctccc tcgcgctggc gtggccgcca tcgtggcgct gctggaggag ggcaacaccg
      541 tgcccttcat cgcccggtac cgcaaggagg cgaccggctc gctcgatgaa gtggccatcc
      601 gcgccgtgga agaccggcac gcctactaca aggacctgct ggaccgccgg aagaccgtgc
      661 tgaagtccat cgacgagcag ggcaagctca cgccggagct gaagaccaag atcgagacca
      721 cctgggtgaa ggcggagttg gaagacctct acctccccta caagccgaag aagcgcacca
      781 aggccaccgt ggcgcgggag cggggcctgg agcccctgct ggactcgctg ctggccgacg
      841 acagcggcgc cgacccgttc ctcatctgcg agccgttcat caaggacgag gacggcctcc
      901 ggtccccctc ggaatgcatg gagggcgcgg gccacatcct ggccgagcgc atggccgagg
      961 acgccgccat ccgcgcctgg ctgcgcctgg agttccacga gcacggcgtc atgaagtccg
     1021 agatccgcga ggagcgcaag accgatcagg ccgcgctgcg gttcaagccc tacttcgact
     1081 tctccgagcc catccggaag attcccagcc accgcctgct ggccctccgg cgcggcgaga
     1141 aggaggagat cctcaccgtg aagctgctgt cggaccggga gagcctcgtc acccagctgg
     1201 tgtcgaagat ccaggtgaat ccgggcagtg gctaccgccg cttcctccac gatgtcgccg
     1261 gggacgcctt cgaccgcctg ctggcgccca ccatcgaatc cgaggtgcgc tacgaggcga
     1321 agaagaaggc cgacgccgag gccatcaagg tcttccagac caacctcgat cacctcctgc
     1381 tggcgccgcc cgcgggccag cggtgcaccc tgggcgtgga ccccggcatc cgcaccggct
     1441 gcaagctggt ggtcatcaac cgcctgggcc agctcgtgca gaacgaggtg atctaccccc
     1501 tggaacccaa gcgcgacctg gagggcagcc gcgccatcct cgagaagctc tgcactgaga
     1561 accccgtgga ggccatcgcc atcggcaacg gcaccggcgg tcgcgaggtg gaggccttca
     1621 tccgcgaatg gctgaaggaa accaaccgca ccgggctcat ctgcgtgagc gtgagcgagg
     1681 ccggcgcctc ggtgtactcc gcgtccgaca tcgcccggga ggagttcccc gagcacgacg
     1741 tcaccgtgcg cggcgccgtg agcatcgccc gccgcttcca ggatcccctg gccgagctgg
     1801 tgaaggtgga tcccaagagc atcggcgtgg gccagtacca gcacgacgtg aaccagaccg
     1861 ccctgaagaa gggcctggat gatgtggtcg agagctgcgt gaaccgcgtg ggcgtggacc
     1921 tcaacagcgc ctcgtacaag ctgctggcct acgtggcggg catcggcgag gggctggcca
     1981 agagcatcgt cacccaccgc ttcgagcatg gcgccttcaa gcgccgcgag cagctgatgg
     2041 acgtgagccg cttcggcgcc aaggccttcc agcaggccgc gggcttcctc cgcatccacg
     2101 acggcgacga tcccctggac gcctccgccg tgcaccccga gagctacccc gtggtgcagc
     2161 gcatctgcca gctggccggc aagaccgtgc ccgagctcat cggcaacgac gcggtgctgg
     2221 acgccctcga ccccaagctg ctcgtggacg agacgttcgg cgtcgagacc gtgaaggaca
     2281 tcctcgccga actcaagaaa cccggccgcg acccccgcca ccgcttcgag atcgtgcagt
     2341 tccgcgaggg cgtgaacaag ccctccgacc tggagatcgg catggagctc cagggcatcg
     2401 tcacgaacgt gaccgacttc ggcgccttcg tggacgtggg tgtccac
//
LOCUS       DATGWW010000290         1504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_247876, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000290 DATGWW010000000
VERSION     DATGWW010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_247876"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..352
                     /locus_tag="VK150_04305"
     CDS             <1..352
                     /locus_tag="VK150_04305"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HLP30561.1"
                     /translation="DATLVSLAQTCTTILREEDLVGRWGGEEFVVLLPETGHDRAVDV
                     AERLCCAVAATPVAPPGGPPFHVTASIGVASWSPGDTGVDLILGRADRALYEAKHAGR
                     NRVVGLRMDVPMSG"
     gene            complement(420..767)
                     /locus_tag="VK150_04310"
     CDS             complement(420..767)
                     /locus_tag="VK150_04310"
                     /inference="COORDINATES: protein motif:HMM:NF018633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1292 domain-containing protein"
                     /protein_id="HLP30562.1"
                     /translation="MAHEGHEHGPDCNHDHDDSFEIEVVELEDENGEKEEFAILEELE
                     FEGRNFAILAPLAELQAQEEGKADPEEGLSLEIFEVKDDMFTPLEDEELAERLMKHLD
                     EQEAKLKAEEEKD"
     gene            complement(854..>1504)
                     /gene="flgA"
                     /locus_tag="VK150_04315"
     CDS             complement(854..>1504)
                     /gene="flgA"
                     /locus_tag="VK150_04315"
                     /inference="COORDINATES: protein motif:HMM:TIGR03170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation chaperone
                     FlgA"
                     /protein_id="HLP30563.1"
                     /translation="LVLQASPAERSALERLADTALSYAQAEAAKLGGEHRFKVAQPPH
                     LPMTRPGALAFEASHLSKREPMGRFFVVVAVKVDGEKVGMVRVDLEGTWVGTVLRAKG
                     DLARKTELTDEQVEPGAFEGVPPEGALTALPEGQRLMRAVPAGRILTRADLEVIPLVQ
                     SGDKVRLTASHEALSISLDTIARSRAGLGDRVRLEAPGSRRAVTAIVTGPGEARLQ"
BASE COUNT          194 a          537 c          521 g          252 t
ORIGIN      
        1 ggatgccacc ctggtctcgc tggcccagac ctgcacgacg atcctgcgcg aggaggatct
       61 ggtgggccgc tggggcggcg aggaattcgt ggtcctgctg ccggaaaccg gccatgaccg
      121 agccgtcgac gtggccgagc gcctctgctg cgcggtggcg gccacgccgg tcgccccgcc
      181 cggggggccg cctttccacg tcaccgcgtc gatcggcgtg gcctcctggt cgccggggga
      241 cacaggcgtg gacctgatcc tgggccgggc ggaccgggcc ctgtacgagg cgaagcacgc
      301 agggcgcaac cgggtggtgg ggctccggat ggatgtcccc atgtcgggct gatcccgctc
      361 cgccggtacg tgcgaaggcc cccgcgacgg gggccttcgc tgaatggatg aagcagggat
      421 cagtccttct cttcctcggc cttgagcttg gcttcctgct cgtcgaggtg cttcatgagg
      481 cgctcggcca gctcttcgtc ctcgaggggg gtgaacatgt cgtccttcac ctcgaagatc
      541 tccaggctca ggccctcttc agggtcggcc ttgccctcct cctgggcctg cagctcggcc
      601 aggggcgcca ggatggcgaa gttgcggccc tcgaactcga gctcttccag gatcgcgaac
      661 tcctccttct cgccgttctc gtcttcaagc tcgacgactt cgatttcgaa ggaatcatcg
      721 tgatcgtggt tgcagtccgg tccgtgttcg tgaccctcgt gagccatggg ctcctccttg
      781 cgcaagggac cagaatacgg tcgaaacccc tcgcggccaa ggaaagatcc tggaaggccc
      841 gccccctggc gttctactgg agccgggcct cgccggggcc ggtgacgatg gccgtgaccg
      901 cccggcggct gcccggggcc tccaggcgca cccggtcgcc caggcccgcc cggctgcggg
      961 cgatggtgtc caggctgatg ctcagggcct cgtggctggc cgtcagccgc accttgtcac
     1021 cggactgcac gaggggaatg acttccaggt ccgcccgggt caggatccgg cccgcgggga
     1081 cggcccgcat gagccgctgc ccctcgggga gggccgtgag ggcgccctcc ggcggcacgc
     1141 cctcgaacgc gccgggctcc acctgctcgt ccgtgagttc ggttttcctc gccaggtcgc
     1201 ccttggcgcg cagcaccgtg cccacccagg tgccttccag gtccacccgc accatgccca
     1261 ccttctcgcc atccaccttg acggccacca ccacgaagaa gcggcccatg ggctcgcgct
     1321 tgctgaggtg ggaggcctcg aacgccaacg cgccgggccg ggtcatgggc aggtgcggcg
     1381 gctgggccac cttgaaccgg tgctccccgc ccagcttcgc ggcctccgcc tgggcgtagg
     1441 acagggccgt gtcggccagc cgttccaggg cggagcgttc ggcgggggag gcctgcagca
     1501 ccag
//
LOCUS       DATGWW010000291         2812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_295231, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000291 DATGWW010000000
VERSION     DATGWW010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2812
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295231"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1062)
                     /locus_tag="VK150_04320"
     CDS             complement(<1..1062)
                     /locus_tag="VK150_04320"
                     /inference="COORDINATES: protein motif:HMM:TIGR00795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HLP30564.1"
                     /translation="MTPWTQVYSPVMGNIFLSALVAALPVFVLLGFLAKHVKAHYSAI
                     LGLITCYVVAVLVYKMPAGMAGMAAVHGALFGLLPIGWIVLNAIFIYDITVKSGDFEV
                     VKHSIAGLAGDRRIQALLIAFSFGAFIEGAAGFGTPVAISAAMLIGLGFRPLQAAGLA
                     LIGNTAPVAYGALGSPLIALAGVTGLPLDMLSAAAGRILPIFSLIVPFWIIWTMAGRK
                     AMMEVWPACLVAGGSFAITQFAVSNFHGPWLVDIIGAIVSMVSLVLFLKVWQPKTTWR
                     YEHEREEAHAAKVEQPTGKIVKAWMPWVFLSLFVFAWGTPQVKTFLNGGTKEKPNFLA
                     GYTVKNFEIPLLHKNVIKAP"
     gene            1234..1950
                     /locus_tag="VK150_04325"
     CDS             1234..1950
                     /locus_tag="VK150_04325"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HLP30565.1"
                     /translation="MEFTPIRTRRLYEEIVEQIKQLITDGRLKPGDKLLAERELAEQF
                     QVSRASVREAIRTLEMLGVIDIRPGEGTFVRGTETDDIIRPLAMFLAVERSSLLDMFE
                     MRRIFETATARLAAERATEEEFDQIEAMLENMRERLNVQDPEKGEEYDAAFHYAVAEA
                     THNSLLIKLFKTVSEEFAKANSVARRQLYHNSVQNAQKIIDQHSEILEAIRARSPEQA
                     SAAMLSHLIFAEDELRKWIV"
     gene            complement(2006..2081)
                     /locus_tag="VK150_04330"
     tRNA            complement(2006..2081)
                     /locus_tag="VK150_04330"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2046..2048),aa:Ile,seq:cat)
     gene            complement(2120..>2812)
                     /locus_tag="VK150_04335"
     CDS             complement(2120..>2812)
                     /locus_tag="VK150_04335"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HLP30566.1"
                     /translation="IVPDPWFSSFTVRTPMQWRSKVFMLPAILPLFPLPQVVLFPETF
                     LPVRIFEPRYQEMTVDVLNAHHHLILTLMRENPEPGSMGESAPIFDIGCLAEVVRAEP
                     LTGGRWNLLLQGKDTVRILEEVSGKLYRQARTEVLPFDASMLWPGPHRRRLMESLEAY
                     AASEGIEAQLKELLDLPLEDVGRLNTLAMALDFEPTERQFLLESPDLPTLADRMLQLL
                     DFAVGGRSIQGL"
BASE COUNT          574 a          820 c          976 g          442 t
ORIGIN      
        1 gggagccttg atgacgttct tgtggagcag ggggatctcg aagttcttga cggtgtagcc
       61 ggccaggaag ttcggcttct ccttggtgcc gccgttcagg aaggtcttga cctgaggggt
      121 gccccaggcg aacacgaaga gggagaggaa cacccagggc atccaggcct tgacgatctt
      181 gccggtgggc tgctcgacct tggcggcatg ggcctcctca cgctcgtgct catagcgcca
      241 ggtggtcttg ggctgccaga ccttcaggaa gagaaccagc gacaccatgg agacgatggc
      301 gccgatgatg tccaccagcc aggggccatg gaagttgctc acggcgaact gcgtgatggc
      361 gaagctgccg ccggccacga ggcacgccgg ccagacttcc atcatcgcct tgcgtccagc
      421 catggtccaa atgatccaga agggaacgat cagcgagaag atgggcagga tgcggccggc
      481 ggcggcgctc agcatgtcca gggggaggcc cgtcacgccg gcgagggcga tgagggggct
      541 gcccagggcg ccataggcca cgggagcggt gttgccgatc agggcgaggc ccgcggcctg
      601 aagggggcgg aagcccaggc cgatgagcat ggccgccgaa atggccacgg gggtgccgaa
      661 gccagccgcg ccctcgatga aggcgccgaa gctgaaggcg atcagcaggg cctggatgcg
      721 gcggtccccg gcgaggccgg cgatggaatg tttcaccacc tcgaagtccc cggacttcac
      781 ggtgatgtcg tagatgaaga tggcgttcag cacgatccag ccgatgggca ggaggccgaa
      841 cagggcgccg tggacggcag ccatgccggc catgcccgcg ggcatcttgt agacaagcac
      901 ggccaccaca tagcaggtga tcaggcccag aatggccgaa tagtgagcct tcacgtgctt
      961 ggccaggaag cccagcagca cgaagactgg cagggcggcc accagggccg aaaggaagat
     1021 attccccatg acgggggaat agacttgggt ccagggggtc atgcagcctc cagaggtggg
     1081 gggtaagagg atgggtaggt agagtttttg gaaagaacct gcgcgaagat tacaatgggt
     1141 ctagtggtca gaccatacgg aagagacctg gaattggtca cagtttccat gtagtatgtt
     1201 tatcaacagt tatattttca gagatgtgca cccatggaat tcaccccgat ccggacccgc
     1261 cgcctctacg aggaaatcgt ggagcagatc aagcagctca ttacggacgg gcggctgaag
     1321 cccggcgaca agctgctggc ggaacgggag ctggcggagc agttccaggt gagccgggct
     1381 tccgtgcgcg aagcgatccg caccctcgag atgctcgggg tcattgacat ccgccccggc
     1441 gagggcacct tcgtgcgcgg caccgaaacc gacgacatca tccggcctct ggccatgttc
     1501 ctggcggtgg agcgcagctc gctgctcgac atgttcgaaa tgcggcgcat cttcgagacc
     1561 gccaccgcgc ggcttgccgc ggagcgggcc actgaggagg aattcgacca gatcgaggcg
     1621 atgctggaga acatgcggga gcgcctgaac gtgcaggatc ctgagaaggg cgaggaatac
     1681 gacgctgcct ttcactacgc cgtggccgag gccacccaca acagcctgct catcaagctc
     1741 ttcaagaccg tctcggaaga gttcgcgaag gcgaattccg tggcccgccg gcagctgtac
     1801 cacaacagcg tgcagaacgc ccagaagatc atcgaccagc actccgagat cctggaagcc
     1861 atccgggccc gctcgcccga gcaggcctcg gccgcgatgc tctcgcacct catcttcgcc
     1921 gaggacgaac tccggaagtg gatcgtctag acaggacgag ggctcgtcga gccctcgtcc
     1981 catgtgccaa tcccggtacg cgggttggtg gccccggtgg ggttcgaacc cacgaccaag
     2041 cggttatgag ccgccagctc tgaccgctga gctacagggc cagggccagt gtagcaaacg
     2101 ggctcggccc ggcttcaagt cacagcccct ggatggatcg gccgcccacg gcgaagtcca
     2161 ggagctggag catgcggtcc gcgagggtcg gcaggtccgg ggactccagg aggaactggc
     2221 gttcggtagg ctcgaaatcc agggccatgg ccagggtgtt caaacgtccc acatcctcca
     2281 ggggcaggtc gaggagctcc ttgagctggg cctcgatgcc ctcggaagcc gcgtaggcct
     2341 cgagcgattc catgaggcgg cgacgatggg gaccgggcca gagcatcgag gcgtcgaagg
     2401 gaagcacttc ggtgcgggcc tggcgataga gcttcccaga gacctcttcg aggatgcgca
     2461 ccgtgtcctt cccctgcagc agcaggttcc agcggccgcc ggtgagcggc tcggcgcgga
     2521 ccacctccgc caggcaccca atgtcgaaga tgggcgcgga ttcgcccatg gagcctggtt
     2581 cagggttctc ccgcatcagg gtgaggatga ggtgatggtg ggcgttgagg acgtccaccg
     2641 tcatctcctg gtagcggggt tcgaagatgc gcaccggaag gaaggtctcc gggaacagca
     2701 cgacctgggg caggggaaag aggggaagaa tggctggtag catgaacacc ttgcttcgcc
     2761 attgcatcgg agtccgcacc gtgaaggatg agaaccaggg gtctggaacg at
//
LOCUS       DATGWW010000292         4769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_248148, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000292 DATGWW010000000
VERSION     DATGWW010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4769
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248148"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1108
                     /gene="amrB"
                     /locus_tag="VK150_04340"
     CDS             <1..1108
                     /gene="amrB"
                     /locus_tag="VK150_04340"
                     /inference="COORDINATES: protein motif:HMM:TIGR04336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AmmeMemoRadiSam system protein B"
                     /protein_id="HLP30567.1"
                     /translation="APPSLEAVQKGMGIPCIQDLRGQQDTVGFASTAGQMADAWAASA
                     LPPAPETFRPLPAPGVAGLICPHDDYRYAGRVYRRLVPLVSARTVVLVGVFHKYRSFG
                     AKDALVFDRHRAWRTPDGELRISPLREELLGRLPAGDVIQDDAMQDREHSLEAIAYWL
                     KHQDPSVEILPILIPAASFERLQALAARLGSALAEGMTRRGWSLGRDVAVVISSDGIH
                     YGADFNHVPFGSGGVESYLQAMARDRALLLGPLSGPVSIEKARTFFATVVNPDQPDEY
                     RMPWCGRFSIPLGLLLLRETAHALKMPSPRGIPAAFGASIGFPQLPVPGLGVTAEANL
                     FHFVSYPGVAYTLGPEQVPPSGPRAKPQDDAKRQ"
     gene            complement(1064..1591)
                     /locus_tag="VK150_04345"
     CDS             complement(1064..1591)
                     /locus_tag="VK150_04345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30568.1"
                     /translation="MDSYRLWVQAHPLLSAALQFALLGTLGEVVAASLRGRRPTLPCT
                     LPQLLAKVAAWAVLGLVIKAGFVGMKGFTRGLLDHHLLPAFLGSGLGWAFALSALTNG
                     FFGPQMMLFHRFEDNLILRRRGFDGMAPALWTLLWFWVPAHTLTFSLPADYQVGLAAL
                     WSLALGIILGLRPRT"
     gene            complement(1627..2760)
                     /gene="mnmA"
                     /locus_tag="VK150_04350"
     CDS             complement(1627..2760)
                     /gene="mnmA"
                     /locus_tag="VK150_04350"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HLP30569.1"
                     /translation="MSSLLARAQEALAAHPRLRPGDRVLAAMSGGVDSSVMAALLQRS
                     GYEVIGISMQLFDKKTTTGSDGKCCTLDDFQDARRVAHEFGFPHYVMDFEARFRDTVI
                     EGFIQGYLDGETPSPCIRCNQHLKFSALMERAEALEASFVATGHYAAITCSEGVWRLC
                     KASDPAKDQSYFLFHHTQATLARTLFPLAGFTKPEVRRLGADLGLHLAEKAESQEICF
                     VTQDRYDAFLEAEGRDPGRGEGEIRHLDGRVLGRHQGYWRHTVGQRRGLGVAHAEPLY
                     VIRVEPTTNTVWVGAESDLLGRELVARELSWVHGQPAGPLACDARIRSRSPEAEALVI
                     PLPDGRVKVAFAEPQRAIAPGQAVVFYREGEVLGGGWIDGHGL"
     gene            complement(2792..>4769)
                     /locus_tag="VK150_04355"
     CDS             complement(2792..>4769)
                     /locus_tag="VK150_04355"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HLP30570.1"
                     /translation="LERMSLNAMLKPDQPTPTTPTKEGLVARYRPILLLAAGYLSLGI
                     LLRGFLWFRFGREAQVKASAIFWVLPAGMISDAVQSLYLFLPLALYLWLKTPNGAIRR
                     WGPLGPSILTFLYALGGLFLVACEYFFFEEFNARFNLVSVNYLMYPTEVAGDIWSEYP
                     VVKILIFCALAAGVAAWKLRPRWVGALTVPVTFKTRSLVMAAHAGALLLAIAFVPTNL
                     LGFSSNRVTNELEANGISSFFRALRTSEIDYHAYYATRPAGENLDRLAAQLAPGGGTF
                     TRLAEGRLDRQFPARPDGLGKLNVILVSSESFGAEFSKLYGSNRDWTPEFDRFAQQGL
                     WFRHVYATGTRTVRGLEALSTSLPPVPTEAILRRPGHEAMATLGSVLRAHGYQTAFLY
                     GGYGYFDNMNTFFQSNGYDVLDRRNLETKPRFENIWGVSDEDLFDMALSYADKRAATG
                     APFFLHIMNTSNHKPYTFRPGLEGIGVKVKGGGRESGVRYADFAQGRFLRDAERHSWF
                     KDTLFVVVADHGARVYGRQEIPLKTYEIPLMFYAPGRLAPRRSGGLMSQIDVAPTLMG
                     LLGLPYTAPWFGQDVLNTPESGRVLLFNHNDHAALMKDGTLTILGLHGSCVSKVYDTE
                     KDAYRLLPKGSGHDDLAIAYYQTAYELFKSKKYN"
BASE COUNT          792 a         1542 c         1691 g          744 t
ORIGIN      
        1 ggctcccccc tccctcgaag cggtccagaa gggcatgggc atcccgtgca tccaggatct
       61 ccgcggtcag caggacaccg tgggcttcgc gtccacggct gggcagatgg cggacgcctg
      121 ggcggcctcg gcgctgcctc ccgcgccgga aaccttccgt cccctgccag cgcccggcgt
      181 ggccgggctc atctgccccc acgacgacta ccgctatgcc ggccgggtct atcggcggct
      241 cgtgcccctg gtctctgccc gcaccgtggt gctggtgggc gtgttccaca agtaccggag
      301 cttcggcgcc aaggacgcgc tggtgttcga ccgccatcgc gcctggcgca ccccggacgg
      361 cgagctccgg atctcgcccc tgcgggagga gttgctgggg cgcctgcctg cgggagacgt
      421 catccaggac gacgccatgc aggaccgcga acattcgctg gaagccatcg cctattggct
      481 gaaacaccag gatccttcgg tggaaatcct tcccatcctc attcccgccg cttccttcga
      541 gcgactccag gccctggctg cccggttggg ttcggccctg gctgaaggca tgacccgccg
      601 tggctggagt ctcggccggg acgtggcggt ggtcatctcg tcggacggca tccattacgg
      661 cgcggacttc aaccatgttc cctttggctc gggaggcgtg gagtcctacc tccaggccat
      721 ggcccgggac cgggccctgc tcctggggcc gctttcgggg ccggtgtcga tcgagaaggc
      781 caggaccttc ttcgccacgg tggtgaaccc cgatcagccg gacgagtacc ggatgccctg
      841 gtgcggccga ttctccattc ccctcggcct cctgctgctg cgggagacgg cgcatgcgct
      901 caagatgcct tcaccccggg ggattcccgc ggccttcggc gcttccatcg gcttcccgca
      961 attgcccgtg ccaggcctgg gcgtgactgc cgaggcgaac ctcttccatt ttgtgagcta
     1021 ccccggggtg gcctacacgc tggggccgga gcaggtcccg ccctcaggtc cgcgggcgaa
     1081 gccccaggat gatgccaagc gccagtgacc acagggcggc caggcccacc tggtagtccg
     1141 ccggcaggct gaaggtcagg gtgtgggcgg gcacccagaa ccagagcagc gtccacaggg
     1201 ccggcgccat gccgtcgaac ccgcgtcgac gcaggatcag gttgtcctcg aagcggtgga
     1261 acagcatcat ctggggcccg aagaagccgt tggtgagcgc cgacagcgcg aaggcccagc
     1321 ccaggccgga gcccaggaac gcgggcagga ggtggtggtc gaggagccct cgcgtgaagc
     1381 ccttcatgcc cacgaagccg gctttgatca ccaggccgag gacagcccag gccgcgacct
     1441 tggccagcag ctggggcagg gtgcagggca gggtggggcg tcggccccgc aggctcgccg
     1501 ccaccacttc gcccagggtg ccgaggaggg cgaactggag ggcggcggag aggagcggat
     1561 gggcctggac ccagagacgg tagctatcca tgccgacagg ctagcgttca caggcccggg
     1621 cgggggtcac agcccgtggc cgtcgatcca gccgccaccg aggacctcgc cctccctgta
     1681 gaagaccacg gcctgcccag gcgcgatggc ccgctgaggc tcggcgaacg ccaccttgac
     1741 ccgcccgtcg gggaggggga tgaccagggc ctcggcctcc ggggaccggc ttcggatgcg
     1801 cgcgtcgcag gcgaggggcc cggcgggctg gccgtgaacc cagctgagct cccgcgccac
     1861 cagctcccgg cccagcaggt ccgactcggc acccacccag acggtgttcg tggtgggctc
     1921 cacccggatc acgtagagcg gctcggcatg ggccacgccc agtccccgcc gctgacccac
     1981 cgtatggcgc cagtaaccct ggtggcggcc aagcacccgg ccgtccaggt ggcggatctc
     2041 accttcaccc cggccggggt cccggccctc cgcctccagg aaggcgtcgt accggtcctg
     2101 ggtcacgaag cagatctcct ggctctccgc cttctccgcg aggtgcagcc ccaggtcggc
     2161 gccgaggcgg cgaacctcgg gcttggtgaa cccggccagg gggaacaggg tccgggcgag
     2221 ggtcgcctgg gtgtggtgga acaggaagta gctctggtcc ttggcggggt ctgaggcctt
     2281 gcagagacgc cagacaccct cggagcaggt gatggcggcg taatggcccg tggcgacgaa
     2341 ggacgcctcc agggcctcgg cccgttccat caaggcagag aacttgaggt gctggttgca
     2401 acgaatgcag gggctcggtg tttcgccatc caggtacccc tggatgaacc cctcgatgac
     2461 cgtatcgcgg aagcgggcct cgaagtccat cacatagtgg gggaagccga actcgtgggc
     2521 gaccctcctg gcatcctgga aatcatcaag ggtgcagcac ttgccatccg aacctgtggt
     2581 ggtcttctta tcgaagagct gcatggaaat gccgatgacc tcgtagcccg accgctggag
     2641 cagggcggcc atgacggaac tgtcgactcc cccggacatg gcggccagca cacggtcccc
     2701 aggccggagg cgggggtggg cggcgagggc ctcctgggcc cgggcgagaa gcgagctcaa
     2761 tgcaggtaat ccttcggaag gttgcgctgg atcaattgta tttctttgat ttgaagagct
     2821 cgtacgcggt ctggtagtag gcgatggcca ggtcgtcgtg gccgctgccc ttcggcaaca
     2881 gccggtaagc atccttctcg gtgtcgtaga ccttggagac gcagctgccg tggagcccca
     2941 ggatggtgag ggtaccgtcc ttcatgaggg ccgcgtggtc gttgtggttg aacaggagga
     3001 cccggccgga ttccggtgtg ttcagcacgt cctggccgaa ccagggggcg gtgtagggca
     3061 ggccgagaag acccatgagg gtgggagcca cgtcgatctg ggacatgagc ccaccggagc
     3121 gccggggcgc cagccggccc ggcgcgtaga acatgagcgg gatctcgtag gtcttcaggg
     3181 ggatctcctg ccgcccgtag acccgggccc catggtcggc cacgaccacg aagagggtgt
     3241 ccttgaacca gctgtggcgc tccgcatccc gcaggaaccg gccctgggcg aaatccgcgt
     3301 agcgcactcc cgattcccgg ccgccgccct tgaccttcac cccgatgcct tccaggccgg
     3361 gacggaaggt gtagggcttg tggttcgagg tgttcatgat gtggaggaag aagggggccc
     3421 cggtggcggc ccgcttgtcc gcgtaggaca aggccatgtc gaagaggtcc tcgtccgaca
     3481 cgccccagat gttctcaaag cggggcttgg tctccaggtt ccggcggtcg agcacgtcgt
     3541 agccgttgct ctggaagaac gtgttcatgt tgtcgaaata gccgtagccg ccatacagga
     3601 aggccgtctg gtacccgtgg gcccggagca ccgagccgag ggtggccatg gcctcgtgcc
     3661 cgggccgccg gaggatggct tccgtgggca ccgggggcag ggaggtgctc agggcttcca
     3721 ggccgcggac ggtgcgggtg ccagtggcgt agacatggcg gaaccacagc ccctgctggg
     3781 cgaaccggtc gaactccggc gtccagtcgc ggttcgaccc gtacagcttg ctgaactcgg
     3841 cgccgaagga ttcgctcgag accaggatga cgttcagctt cccgaggccg tccgggcggg
     3901 ccgggaactg gcggtcgagg cggccttcgg caaggcgcgt gaacgtgccg ccccctggtg
     3961 ccagctgggc ggccaggcga tcgaggttct cacccgcggg tcgggtcgcg tagtaggcgt
     4021 ggtagtcgat ctcgctggtg cggagggccc ggaaaaagct ggagatgccg ttggcttcaa
     4081 gctcgttggt cacccggttg gaggagaagc cgagcaggtt ggtggggacg aaggcgatgg
     4141 ccaggagcag cgcccccgca tgggcggcca tgaccaggct gcgcgtcttg aaagtcacgg
     4201 gcaccgtgag ggcgccaacc caacggggcc gcagcttcca tgcggcgacc cccgccgcca
     4261 aggcgcagaa gatgagaatc ttcaccaccg ggtattcgga ccagatgtca ccggcgacct
     4321 cagtggggta catgaggtag ttcaccgaca ccaggttgaa tcgggcgttg aactcctcga
     4381 agaagaagta ttcgcaggcc accaggaaga ggccgcccag ggcatagagg aaggtgagga
     4441 tggagggccc cagaggaccc cacctccgaa tggccccatt gggagtcttc agccagaggt
     4501 acaaggcaag cgggaggaag aggtagaggg actggaccgc atcggagatc atgccggcgg
     4561 gcaggaccca gaagatggcg gaggccttca cctgggcttc ccgcccaaac cggaaccaca
     4621 ggaacccccg caggaggatc ccgagactca ggtagcccgc ggcaagcagg aggatcggcc
     4681 ggtaccgcgc cacgagccct tccttcgtgg gcgtggtcgg tgtgggctgg tcaggcttca
     4741 gcatcgcgtt caaggacatc ctttcgagg
//
LOCUS       DATGWW010000293         2177 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_22268, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000293 DATGWW010000000
VERSION     DATGWW010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22268"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..826
                     /locus_tag="VK150_04360"
     CDS             <1..826
                     /locus_tag="VK150_04360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HLP30571.1"
                     /translation="HSDGTDTPESLALLGDQARLSALCLTDHDTLGGIPEFLAMQPKV
                     KVRLLVGTELSCHFLGRSLHVLGLLVDPADGRFQGRLEELRLRREDRNRRMILRLTEL
                     GCPITLDDVQAHSDTPLLSRVHFAKALATRGFVRRAPEAFERLIGDDCPGFVPRQELS
                     PSEATRWIREAGGVPVVAHPGRFAGGGFPWDDAMADLQTQGIEGLEGYYGEYRASEQT
                     YFVRLAARLGLVVTGGSDYHGAHKPGLRLGTGRGGLKVPDDLLDRLETRQKLGTYR"
     gene            858..1256
                     /locus_tag="VK150_04365"
     CDS             858..1256
                     /locus_tag="VK150_04365"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30572.1"
                     /translation="MSNRILLVEDDPINVKFIQTVLVKKGGYDVLVSEEVDEILRLAR
                     EVELAAIIMDVSLSRSSYEGRKVDGIFITQLLKKDEATRHIPVLLATAHAMFGDREKY
                     LELTGAEGYIAKPIHDPGTLIEAVRAVIGA"
     gene            1259..2089
                     /locus_tag="VK150_04370"
     CDS             1259..2089
                     /locus_tag="VK150_04370"
                     /inference="COORDINATES: protein motif:HMM:NF013575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine synthase A"
                     /protein_id="HLP30573.1"
                     /translation="MAGKPAPLAAFRLLIEYDGSRFQGWQKQGAKQSREGVRTVAGSL
                     EHVIHEAGLHLVYLGGAGRTDAGVHALGQVAHLHLEAKGAPRPGELRRLLDSALPQDI
                     AIRDVQACPPRFHARHDAVDRTYLYQISRRRSAFGKPWIWWVKRPLDLERLQRAWTAF
                     EGDQDVSAFADLDTEEDGHSRLFKCEVAEAGSLILLRVRATHFFRRQVRRMVGASVAC
                     ALGEEEPRRVVEDLRNPTEAANLFWGAKAAPASGLFLEAVRYPGDPEPGKPTPTLALP
                     "
BASE COUNT          347 a          790 c          713 g          327 t
ORIGIN      
        1 ccattccgac ggcaccgaca cgcctgaatc tctggccctg ctcggcgacc aggccaggct
       61 cagcgcactc tgcctcacgg accacgacac ccttggcggc atccccgaat tcctggccat
      121 gcaaccgaag gtgaaggtcc gcctgctcgt gggcacggag ctcagctgcc acttcctggg
      181 ccgctccctg cacgtgctcg gactcctggt ggaccccgcc gatgggaggt tccagggccg
      241 gctcgaagaa ctccgcctgc ggcgcgagga ccggaaccgc cggatgatcc tgcggctgac
      301 cgagctgggc tgccccatca ccctcgacga tgtgcaggcc cactcggaca cgccgctgct
      361 ctcccgggtc cacttcgcca aggccctggc gacccggggc ttcgtgcgcc gcgcgcctga
      421 ggccttcgag cgcctcatcg gcgacgactg ccccggcttc gtgccccggc aggagctgag
      481 tccctcggag gccacccgct ggatccggga ggctggcggc gtgcctgtcg tggctcatcc
      541 cggccggttc gccggcggcg ggttcccctg ggatgacgcc atggccgacc tgcagaccca
      601 gggcatcgaa gggttggaag gctactacgg cgagtatcgc gcctccgagc agacttactt
      661 cgtgcggctg gccgcgcggc tcggcctggt ggtcacgggc ggcagcgact accacggcgc
      721 ccacaagccg ggacttcggc tgggcacggg acgcggcggc ctgaaggttc cggacgacct
      781 gctggatcgc ctggaaaccc ggcaaaagct tggcacttac cgctgagtgc cgataggctg
      841 gtgtcgccga ggccttcatg tccaaccgga tcctcctggt ggaggacgac cccatcaatg
      901 tgaagttcat ccagaccgtg ctggtcaaga agggcggcta tgacgtcctg gtttcggagg
      961 aagtcgacga gatcctgcgc ctggcgcggg aagtcgagct cgccgccatc atcatggacg
     1021 tgagcctgtc ccgctcaagc tacgaggggc gcaaggtcga cggtatcttc atcacccagc
     1081 tgctgaagaa ggatgaggcc acgcgccaca tccccgtgct cctggccacg gcccacgcca
     1141 tgttcggcga ccgcgagaag tacctggaac tcaccggagc cgaaggctac atcgccaagc
     1201 ccatccacga ccctggcaca ctgatcgagg ccgtgagggc cgtcatcgga gcctgagcat
     1261 ggccggaaaa cctgcgcccc tggccgcctt ccggctgctg atcgagtacg acggcagccg
     1321 cttccaaggc tggcagaaac aaggcgccaa gcagtctcgg gagggcgtgc gcaccgtggc
     1381 cggcagcctg gagcatgtca tccacgaagc ggggttgcac ctggtctacc tgggtggcgc
     1441 aggccgcaca gacgcgggcg tccatgccct gggccaagtg gcccacctgc acctggaggc
     1501 caagggcgcg ccaaggccgg gcgagctccg ccgcctcctc gacagcgccc tgccccagga
     1561 catcgccatc cgggacgtcc aggcctgccc tccgcggttc cacgcccgcc acgacgcggt
     1621 ggaccgcacc tatctctacc agatcagccg gcggcgcagc gccttcggga aaccctggat
     1681 ctggtgggtg aagcgccccc tcgacctcga gcgcctccag cgcgcctgga cggccttcga
     1741 gggagaccag gatgtgtccg ctttcgccga cctcgacacc gaggaggacg gacactcccg
     1801 gttgttcaag tgcgaagtgg ccgaggcggg atccctcatc ctcctgcggg tccgcgccac
     1861 ccatttcttc cgccgccagg tgcgccggat ggtgggtgcc tccgtggcct gcgccctggg
     1921 cgaagaggag ccccggcggg tggtggaaga tctccggaac cccaccgagg ccgccaacct
     1981 cttctggggt gccaaggccg ctccggcctc gggcctgttc ctggaggcgg tccgctaccc
     2041 cggagatccc gaaccgggga agccgacgcc caccctcgcc ctgccctgac ggagccccga
     2101 tgaccacccg cgacgaagcc tggcagctgc tctgtgactg gaccccctcg gacaagctcc
     2161 gcgtccatgc tcgggcc
//
LOCUS       DATGWW010000294         1838 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_146923, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000294 DATGWW010000000
VERSION     DATGWW010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146923"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1090
                     /locus_tag="VK150_04375"
     CDS             <1..1090
                     /locus_tag="VK150_04375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30574.1"
                     /translation="LAMVLANPAFAALVSRLPRRRFIPLAYRFFALNMLAFFLAFRLL
                     PNHGGAALGYAFYIWLSVFNLFVVSVFWGLMSDVWSEGQGKRLFGFIATGGTLGAIAG
                     AAVTGLLTKGFALGAWHVKVDPLSLLLLSILAMEGAVFCVKRLAGIFQLGDTAHGERE
                     PGPGPLEGLRLIATSRLLQLICVYMLLYTITSTLLYLQQGAIVERTFSGTAARTVAFA
                     RMDLWVNVLTLVTQVFLTGRIITGLGVPVVLSIIPVLTIAGFGALWAWPTFGVLALFQ
                     VLRRGLHYAVDRPAREILYIPLGAEERYKSKPFIDTFIYRGGDLLGVWAPTALLAIGV
                     SVGLASVGCSGLWLGSSVALGRKAGKAG"
     gene            1324..>1838
                     /locus_tag="VK150_04380"
     CDS             1324..>1838
                     /locus_tag="VK150_04380"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30575.1"
                     /translation="MSPSAPVPGRSSDQPQAQSPAIRVMKFGGTSLADADRFRDVAGL
                     VAEARKTHRVCVVASAMAGITNLLLHGGRVPDRAGADRLLDAFRERHAQVVADLAAEL
                     GAGAAEVQETLASLEALGRRLLHGMALLEEGPPSVLAQVSSLGERAACAILVGLLKAR
                     GLEPAYLDPVE"
BASE COUNT          213 a          679 c          620 g          326 t
ORIGIN      
        1 cctggccatg gtgctggcga acccggcctt cgccgccctc gtgtcgcgcc tgccccggcg
       61 gcggttcatc ccgctggcct accggttctt cgcgctcaac atgctggcct tcttcctggc
      121 cttccgcctc ctgccaaacc acggcggcgc cgcgctgggc tatgccttct acatctggct
      181 cagcgtcttc aacctcttcg tcgtgtcggt gttctggggg ctgatgtcgg acgtgtggtc
      241 cgaaggccag ggcaagcgcc tcttcggttt catcgccacc ggcggcaccc tgggcgccat
      301 cgcgggggcc gcggtgacgg gcctgctcac caagggtttc gcgctcgggg cctggcatgt
      361 gaaggtggac cccctctccc tgctcctgct gtcgatcctc gccatggagg gcgcggtttt
      421 ctgcgtgaag cgcctggcgg ggatcttcca gttgggggac acggcccacg gtgagcggga
      481 gcccggtccc ggccccctgg agggcctgcg cctcatcgcc acctcgcggc tgctgcagct
      541 catctgtgtc tacatgctgc tctacaccat caccagcacc ctgctctacc tgcagcaggg
      601 cgccatcgtc gagcgcacct tcagcggcac cgccgcccgc actgtggcct tcgcccgcat
      661 ggacctctgg gtgaacgtgc tgaccctggt cacccaggtc ttcctcacgg gccgcatcat
      721 caccggcctg ggcgttccgg tggtgctgtc catcatcccc gtgctcacca tcgcgggttt
      781 cggggcgctc tgggcctggc ccaccttcgg ggtgctggcc ctcttccagg tgctgcgccg
      841 cggcctgcac tacgccgtgg accggcccgc ccgcgagatc ctctacattc ccctgggagc
      901 ggaggagcgc tacaaatcga agcccttcat cgacaccttc atctaccggg gcggggacct
      961 gctcggggtc tgggcgccca cggcgctcct ggcgatcggc gtgtcggtgg gcctggcctc
     1021 ggtgggctgc tcgggcctct ggctcggcag cagcgtggca ctgggccgca aggccggcaa
     1081 ggcgggttga cttttcgcac cgttccctga agatggcgga catgcatcag cctgtggaag
     1141 ccatcgcctg cgcgccgggg aaccccctcg acggcgggct gccgtgcatg gcgaccttga
     1201 ctcgcagcat gactcgcacc atgccgtccg caccacgggg cgcctgacct gaatcttcct
     1261 ttcagactcg gccccgcggt cacccccgcg gggccttttc cgttccagcc caccggagcc
     1321 cccatgtccc cctcggcgcc cgttccagga cgatcctcag accagcccca ggctcagtcc
     1381 ccggccatcc gcgtcatgaa gttcggcggc accagcctgg cggatgccga ccgcttccgc
     1441 gatgtggccg gcctggtggc cgaggcccgg aagacccacc gagtctgcgt ggtggcctcg
     1501 gcgatggcgg ggatcaccaa cctgctgctg cacggcggcc gggtgcccga ccgcgcgggc
     1561 gccgaccggc tgctcgatgc gttccgcgag cggcacgctc aagtggtggc ggacctggcg
     1621 gcggaactcg gcgccggcgc cgcggaggtg caggagacgc tggcctcgct ggaggccctg
     1681 gggcgccggc tgctgcacgg catggcgctg ctggaggagg ggccgccctc ggtgctggcc
     1741 caggtgtcga gcctgggcga gcgggccgcc tgcgccatcc tggtgggcct gctgaaggct
     1801 cggggcctgg agcccgccta cctcgacccc gtggaatg
//
LOCUS       DATGWW010000295         2281 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_69074, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000295 DATGWW010000000
VERSION     DATGWW010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69074"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VK150_04385"
     CDS             <1..651
                     /locus_tag="VK150_04385"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HLP30576.1"
                     /translation="ASLYMTLGSPIVITRNLDSLPKRDAYRILSSLVIPRPIAWITTV
                     DGEGRVNLAPFSSFMGIFGPPMLAVTLGRRRDGSLKDTHRNLRDRGEAVVHLADLPLL
                     TTLHASAAEVAPEVSEVARLGLAAVASVHVAPPRLAVAPVALECRLNRELELGPGSTL
                     VLLDVVVAHAAERIWSVEHDCADASLWTPISRLASVAGPNYGALGETFRLGASELP"
     gene            complement(659..1561)
                     /locus_tag="VK150_04390"
     CDS             complement(659..1561)
                     /locus_tag="VK150_04390"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HLP30577.1"
                     /translation="MSSGSSHAIALALIANGGIALSKFAVFLLTGSSSLLTEAIHSTA
                     DCANQVLLFIGLRQGQKPAGPKHPLGLGQAPFVASFLVALLLFSVGGLYSLVEGIHKI
                     RHPEQPHHLLWAVALLVVAIGLEGWSLRGALRAAEPERRGRPLLRYLRQSSSTELVVV
                     LAEDIAALLGLVFALGAVLLTMVTGNPVWDGIGSVAIGLLLIAVAAFVGVEVTSLLMN
                     EAPPLALRAAIREAVAEDPAVDQVLNLVAVLVGSERLMVALQVKFRDQPSGAALVAAI
                     NALERTLRQRFPQIQHLFVEPDEA"
     gene            complement(1579..2247)
                     /locus_tag="VK150_04395"
     CDS             complement(1579..2247)
                     /locus_tag="VK150_04395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30578.1"
                     /translation="MRWFLIWLALAGALGAQTPIRVAAVERRGLPPYEPADRIYRLDA
                     GKARGLRVGDRLTVKRKGERLALGHLQVIEVQADHTDAHFDPVSSAYPMVGDLALLLE
                     LKWMPAGPALDPDPLPVPEAPLRSATAPPREGLLYFLPQRADLSPVGQKKVEAWVQAW
                     GRGGRWAIQVPTAKGVNAALQQQRVDALLAALRACGVEAATVERDPRMAEGKHDPAWI
                     RHWD"
BASE COUNT          338 a          821 c          806 g          316 t
ORIGIN      
        1 gcatccttat atatgaccct cgggagcccc atcgtgatca cccggaacct cgacagcctt
       61 cccaagcgcg atgcttaccg catcctttcc agcctggtga tcccgcgccc catcgcgtgg
      121 atcacgaccg tggatggcga aggccgggtg aacctggcgc ccttcagcag cttcatgggc
      181 atcttcgggc cgcccatgct ggccgtcacc ttgggccgcc gccgcgacgg ttccctgaag
      241 gacacccacc ggaaccttcg ggaccgcggc gaggcggtgg tccacctggc ggacctgccc
      301 ctgctcacca ccctgcatgc cagtgccgcc gaggtggcgc ccgaggtcag cgaggtcgcc
      361 cgcctcggcc tcgccgccgt ggcctccgtg cacgtcgccc cgcctcgtct ggctgtggcc
      421 ccggtggccc tggagtgccg cttgaaccgg gagctggagc tgggcccagg cagcaccctc
      481 gtgctgctgg acgtggtggt cgcccacgcc gccgagcgga tctggagcgt cgagcacgac
      541 tgcgccgacg cgagcctctg gactccgatc tcccgcctgg ccagcgtcgc gggacccaac
      601 tacggggccc tgggcgagac gttcaggctg ggcgcgtccg agctgccctg aggctacctc
      661 acgcctcgtc cggctccacg aagaggtgct ggatctgggg gaaccgctgg cggagggtgc
      721 gttcgagggc gttgatggcc gccaccaggg ccgcgccgct gggctggtct cggaacttca
      781 cctggagcgc gaccatcagc cgctcgctgc ccaccagcac ggccaccagg ttcagcacct
      841 ggtccaccgc cgggtcttcc gccaccgcct cgcggatggc ggcacggagc gccagcggcg
      901 gcgcctcgtt catgaggagg ctggtcacct ccacgcccac gaaggccgcc acggcgatca
      961 gcagcaggcc gatggccacg ctgccgatgc catcccacac gggattgccc gtgaccatcg
     1021 tgagcagcac cgcccccagc gcgaacacga ggcccagcag ggcggcgatg tcttcggcca
     1081 ggaccaccac cagctccgtg ctgctggact ggcgcaggta gcgcagcagg ggcctgccgc
     1141 ggcgctcggg ttcggcggcc cggagggcgc cgcgcagcga ccagccctcc aggccgatgg
     1201 ccaccaccag cagggccacg gcccagagga ggtggtgcgg ctgctccggg tgccggatct
     1261 tgtggatgcc ctccaccagc gaatacagcc cgcccacact gaagaggagg agcgccacca
     1321 ggaagctggc cacgaagggc gcctggccga ggcccagggg atgcttcggc ccggccggtt
     1381 tctggccctg gcggaggccg atgaagagca gcacctggtt ggcgcagtcg gcggtggaat
     1441 ggatggcctc ggtgagcagg ctggagctgc ccgtgaggag gaacaccgcg aacttggaca
     1501 gggcgatgcc cccgttggcg atgagggcga gggcgatggc gtgggacgat ccgctggaca
     1561 tgagcccagc ttagccggtc agtcccagtg gcggatccag gccggatcgt gcttcccttc
     1621 ggccatccgg gggtcgcgct cgacggtggc cgcctccacc ccgcaggccc ggagcgcggc
     1681 cagcagcgcg tcgacccgct gctgctggag ggctgcattc acccccttgg cggtgggcac
     1741 ttggatggcc cagcgtccgc cgcggcccca ggcctggacc caggcctcca cctttttctg
     1801 acccacggga ctcaagtcgg cgcgctgcgg caggaaatag agcagccctt ccctgggcgg
     1861 cgccgtggcc gaacgaaggg gcgcctcggg cacgggcagc gggtcgggat ccagcgccgg
     1921 cccggcaggc atccacttca actccagcag cagggcgagg tccccgacca tggggtaggc
     1981 cgaggacacc ggatcgaagt gggcgtcagt gtggtcggcc tgcacctcga tgacctgaag
     2041 gtgtcccagg gcgagccgct cgccctttcg cttcaccgta aggcggtcac ccacgcggag
     2101 gccccgggcc ttccccgcat ccaggcgata gatccggtcg gccggttcat agggcggaag
     2161 gccccgccgc tccaccgcgg ccacgcggat cggcgtctgg gcgccgaggg cgcccgccag
     2221 agcgagccag atgaggaacc accgcatggg gtctcatcgg cggggagggg ggctcagcct
     2281 g
//
LOCUS       DATGWW010000296         2502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_335345, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000296 DATGWW010000000
VERSION     DATGWW010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335345"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VK150_04400"
     CDS             complement(<1..194)
                     /locus_tag="VK150_04400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30579.1"
                     /translation="MTRLTATPLAVALLAAVALPLGAADWSDTFLGYRTSSEFREPGI
                     DGTVGKNILQLGHASGWAYGS"
     gene            complement(222..1640)
                     /locus_tag="VK150_04405"
     CDS             complement(222..1640)
                     /locus_tag="VK150_04405"
                     /inference="COORDINATES: protein motif:HMM:NF013056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HLP30580.1"
                     /translation="MERFFHLKAKGTTVATEVLAGTTTFISMAYVISLIPNAFLKVAG
                     VAPAQGFTAFVVCAILSTLIGAFYANLPIAFASGIGLSAFFAFTVCAPANQGGMGYTI
                     QVALTALLLEGIVFIFLSAMKVREAFMDAIPFSLKKGISVGIGLFIAIIGFVDSGVTQ
                     VGLKFDADTVFPVLKNDPSALFGLHDVNNLFIAKLWDHGHLTPAFWSVVGLFLIAVLV
                     ARRVKGAILLGILAITLVGLLPVSWGGGFTHLPKGALFEVPTWPKMFQYDWSWTKSLG
                     GMLNIFIILFTLLFVDMFDTIGTLMGIGAQGKMLDKDGRFPGASKAFMADAVGTTFAS
                     MFGTTAITAYIESASGVAEGGRTGLTALVVAGWLTLALFLSPLFLMVPLQATSPALMM
                     IGFFMLSEIKEIRFDDITDAIPAYLAVIVMPFTFSIVNGIALGMIAYTVLKAATGRFK
                     EINPIILVLSVVFLLKLLFLSA"
     gene            complement(1663..>2502)
                     /locus_tag="VK150_04410"
     CDS             complement(1663..>2502)
                     /locus_tag="VK150_04410"
                     /inference="COORDINATES: protein motif:HMM:NF013056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="solute carrier family 23 protein"
                     /protein_id="HLP30581.1"
                     /translation="GLTGKVSGPFTAGSAMAVSLFTLGLTILCSVLLRGFWGVIPVLL
                     GVVGGTVLSLILGKVDLASIAAAPWFQVPAFYRPTFSPQAILMIMPAALVVLAEHIGH
                     LVVTGNIMSRDLVKDPGLHRSLLGDGLSNVLSGLAGATPNTTYGENIGVMAITKVYSV
                     WVIRGAALIAILVSFVGKAAAAIRAIPVPVMGGVCLLLFGVIAAAGIRMLVEKQVDYT
                     KARNLVLTSVVLISGISGAAVRLGTVELRGMALGTVVAIFLSLLFWAFDRLGLSNDTE
                     ASH"
BASE COUNT          489 a          761 c          902 g          350 t
ORIGIN      
        1 gagccgtagg cccagccgct ggcgtgcccc agttgcagga tgttcttgcc gacggtgccg
       61 tcgatgcccg gttcgcggaa ctcggagctg gtgcggtagc cgaggaaggt atcgctccaa
      121 tcggcggcgc cgaggggcag ggcgacggcc gcgaggaggg ccacggcgag aggggtggcg
      181 gtgagcctgg tcatggaaac tcctggaagg gggaactgga tctaggcgga caggaagagg
      241 agcttgagca ggaagaccac ggagaggacg aggatgatcg gattgatttc cttgaaccgg
      301 cccgtggcgg ccttcagcac ggtgtaggcg atcatgccca gcgcgatgcc gttcacgatg
      361 gagaaggtga agggcatgac gatgacggcc aggtaggcgg ggatcgcgtc ggtgatgtcg
      421 tcgaagcgga tctccttgat ctccgacagc atgaagaagc cgatcatcat cagcgccggc
      481 gacgtggcct gcagcggcac catcaggaag agcggcgaca ggaagagcgc cagggtcagc
      541 cagcccgcca ccaccagggc ggtgagcccc gtgcgcccgc cctcggccac gcctgaggcg
      601 ctctcgatgt aggcggtgat ggctgtggtg ccgaacatgg acgcgaacgt ggtgcccacg
      661 gcgtcggcca tgaaggcctt cgacgcgccc gggaagcggc cgtccttgtc cagcatcttc
      721 ccctgggcgc cgatgcccat cagcgtgccg atggtgtcga acatgtccac gaagagcagg
      781 gtgaacagaa tgatgaagat gttcagcatg ccgccgaggg acttcgtcca gctccagtcg
      841 tactggaaca tcttgggcca ggtcggaacc tcgaagaggg cgcccttggg caggtgggtg
      901 aagccgccgc cccagctcac gggcagcaga cccaccagtg tgatggcgag gatgcccagg
      961 agaatggccc ccttcacgcg ccgagccacc agcaccgcga tgaggaagag gcccaccacc
     1021 gaccagaagg ccggcgtgag gtgaccgtga tcccagagct ttgcgatgaa gaggttgttc
     1081 acgtcatgca ggccgaagag cgccgagggg tcgttcttca gcacgggaaa gaccgtgtcg
     1141 gcgtcgaact tcaggcccac ctgggtgacg ccggaatcca cgaagccgat gatggcgatg
     1201 aagaggccga tgcccaccga gatccccttc ttcagcgaga aggggatggc gtccatgaag
     1261 gcttcccgca ccttcatggc gctgaggaag atgaagacga tgccctccag cagcagggcc
     1321 gtgagggcca cctggatggt gtagcccatg cccccctggt tcgccggcgc gcagaccgtg
     1381 aacgcgaaga acgccgaaag cccgatgccc gaggcgaagg cgatgggcag gttggcgtag
     1441 aaggcgccga tgagcgtcga gaggatggcg cagaccacga aggccgtgaa gccctgtgcc
     1501 ggcgcgacgc ccgccacctt gaggaaggcg ttggggatca gcgagatcac gtacgccatg
     1561 gagatgaagg tcgtggtgcc cgcgagcacc tccgtggcca cggtggtgcc cttggccttc
     1621 aggtggaaga accgttccat gcaggactcc agagagagtg ggtcagtggg aggcttcggt
     1681 gtcgttgctg aggcccaggc ggtcgaaggc ccagaagagc aggctgagga agatggccac
     1741 cacggtgccg agggccatgc cccggagctc caccgtgccc agccgcacgg ccgcgccgct
     1801 gatgccgctg atgaggacga cgctggtgag gacgaggttc cgggccttgg tgtagtccac
     1861 ctgcttctcc accagcatgc ggatgcccgc cgcggcgatg acgccgaaga gcagcaggca
     1921 gacacccccc atcaccggca ccgggatggc gcggatggcc gcggcggcct tgcccacgaa
     1981 actcaccagg atggcgatga gcgccgcgcc ccggatcacc cacacgctgt agaccttggt
     2041 gatggccatg acgccgatgt tctcgccgta cgtggtgttg ggcgtggcgc cggccaggcc
     2101 cgagaggacg ttcgagaggc cgtcgcccag cagcgagcgg tgcaggccgg ggtctttcac
     2161 caggtcgcgg gacatgatgt tgcccgtcac caccaggtgg ccgatgtgct ccgccagcac
     2221 cacgagcgct gcgggcatga tcatcaggat ggcctggggg ctgaaggtgg gccggtagaa
     2281 ggcgggcacc tggaaccagg gcgccgccgc gatggacgcc agatccactt tgccgaggat
     2341 caacgacagc accgtgccgc ccaccacgcc gagcagcacc gggatcaccc cccagaagcc
     2401 ccgcagcagc accgagcaga ggatggtgag gcccagggtg aagagggata ccgccatggc
     2461 ggatccggcc gtgaagggcc cggacacctt gcccgtgagg cc
//
LOCUS       DATGWW010000297         2146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_69169, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000297 DATGWW010000000
VERSION     DATGWW010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69169"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            138..752
                     /gene="gmk"
                     /locus_tag="VK150_04415"
     CDS             138..752
                     /gene="gmk"
                     /locus_tag="VK150_04415"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR03263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HLP30582.1"
                     /translation="MIQHPGNVFVVSAPSGAGKSTLAQRLVRSVPDLSFSTSFTTRPP
                     RPGEVDGRDYFFVDDARFDAMVAEGGLVEWVQVYGHRYGTGREWLTGVLASGRDVLLD
                     IETTGALNLRQAIPDARMIFILPPSAAALEERLRGRGKDSDEQIRIRMQYARHELELY
                     HAYDYLILNDDLELAYKQLEGVVQATRASRARMEPVARKILEGF"
     gene            816..>2146
                     /locus_tag="VK150_04420"
     CDS             816..>2146
                     /locus_tag="VK150_04420"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HLP30583.1"
                     /translation="MARFIKRNWMWMVLAATVAVAGPLLARSNGESARQRSLDTLTEV
                     MDLVQKQTPEPPAPRQLTHATIQGMLHTLDPHSNYMDESEFRLLREEQKGSFFGIGAI
                     IQQHDQGIAIISPMKGGPAERLGVRSGDIIKEIDGTSTEGMSSNAALQKLRGEKGTLV
                     EIAVQRAGIAELLRFSIPRAEVPTNSVYYSFMLNPTTGFILIKDFGETTSEEFEKAVA
                     TLKKQGMKQLILDLRGNGGGVLDAAIGICRQLLGPDQLIVSQKGRDGRDESQTRTSKG
                     AQLDPFPLVVLINRGSASASEIVTGAVQDHDRGLVVGQTSWGKGLVQSVLTINRSRGL
                     ALTTARYYTPSGRSIQRDYTHGLDDYYNPEDEKDAKPQGPAFKTDLGRTVYGGGGINP
                     DVSMPTVRPNEFMINIRFRHQGFFRFAVHEKERFGVKPGQHADDVVMSRFRT"
BASE COUNT          391 a          769 c          678 g          308 t
ORIGIN      
        1 gtcctgggcg gacagagcca ggacgcagcc gagggagagc agcagttcgc gcatggggaa
       61 cctccaggcg tccatcctag gctccagagc aagcgctgcc agggcccgat ccgctaaagt
      121 ggaagcagga ggagcctttg atccagcatc ccgggaatgt gttcgtggtc tccgcgccgt
      181 cgggcgcggg caagtccacc ctcgcccaac ggctggtgcg cagcgtgccg gacctgagct
      241 tctccacctc cttcaccacc cggccgcccc gccccggcga ggtggacggg cgcgactact
      301 tcttcgtgga cgacgcccgt ttcgacgcca tggtcgccga gggcggcctg gtcgaatggg
      361 tgcaggtcta cggccaccgc tacggcacgg gccgggagtg gctgacgggc gtcctggcca
      421 gcgggcggga cgtgctcctg gacatcgaga ccaccggagc cctgaacctg cgccaggcca
      481 tccccgatgc ccgcatgatc ttcatcctcc ccccttcggc cgccgcgctc gaggagcgct
      541 tgcggggccg gggcaaggac tccgacgagc agatccgcat ccgcatgcag tacgcacgtc
      601 acgaactcga gctttatcat gcctatgact acctgatctt gaatgacgac cttgaactcg
      661 cctacaagca gctcgagggg gtggtccagg ccacccgggc gagccgggcg cgcatggagc
      721 cggtggcccg gaagatcctc gaaggcttct gaaaacggcg catcgccccg ggcaggcgcc
      781 gggcgtatcc tggagggacg ttccccggga gcctcatggc ccgtttcatc aagcgcaact
      841 ggatgtggat ggtcctggcc gccacggtgg ccgtggccgg tcccctgctt gcccggtcca
      901 atggcgagag cgcgcggcag cgcagcctgg acaccctgac cgaggtcatg gacctggtgc
      961 agaagcagac gccggagccc ccggcccctc ggcagctcac ccacgccacc atccagggca
     1021 tgctgcatac cctcgacccc cactcgaact acatggacga gagcgaattc cggctgctcc
     1081 gggaagagca gaagggctcc ttcttcggca tcggcgccat catccagcag cacgaccagg
     1141 gcatcgccat catcagtccc atgaagggcg gtcccgccga gcggcttggc gtgcgctccg
     1201 gcgacatcat caaggagatt gacggcacca gcaccgaggg catgagctcc aacgccgcgc
     1261 tccagaagct ccgcggcgaa aaaggcaccc tcgtcgagat cgccgtgcag cgcgccggca
     1321 tcgcggagct gctgcgcttc tccatccccc gcgccgaagt gcccaccaac agcgtctact
     1381 acagcttcat gctgaacccc accacgggct tcatcctcat caaggatttc ggcgagacca
     1441 catctgaaga gttcgagaag gccgtggcca ccctgaagaa gcagggcatg aagcagctca
     1501 tcctcgacct gcgcggcaac ggcggtgggg tgctcgacgc ggccatcggc atctgccggc
     1561 agctgctggg ccccgaccag ctcatcgtca gccaaaaggg ccgtgacggc cgggacgaga
     1621 gccagacgcg gacgagcaag ggcgcgcagc tggatccgtt ccccctcgtc gtcctcatca
     1681 accgcggctc ggccagcgcc agcgagatcg tcaccggcgc cgtgcaagac cacgaccgcg
     1741 gcctggtggt gggccagacc agctggggca agggcctcgt gcagagcgtg ctcaccatca
     1801 accgctctcg gggactcgcc ctcaccaccg cccgctacta cacgccctcg ggccgcagca
     1861 tccagcgcga ctacacccac ggcctggacg actactacaa ccccgaggac gaaaaggacg
     1921 ccaagcccca gggtcccgcc ttcaagacgg atctgggccg cacggtctac ggcgggggcg
     1981 gcatcaaccc cgacgtctcc atgcccacgg tccgccccaa cgagttcatg atcaacatcc
     2041 ggttccgcca ccagggtttc ttccgcttcg cggtccacga gaaggagcgg ttcggcgtga
     2101 agcccggcca gcacgccgat gacgtggtga tgtcgcgctt ccgcac
//
LOCUS       DATGWW010000298         2996 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_69259, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000298 DATGWW010000000
VERSION     DATGWW010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2996
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69259"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..676)
                     /locus_tag="VK150_04425"
     CDS             complement(110..676)
                     /locus_tag="VK150_04425"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HLP30584.1"
                     /translation="MRAGLLLLTGGAGHRMGGAKHALPHPGGGSWGGHLVRVFEAVFP
                     GAPVQLLGEPLPDRPGLPCVDDPREGPAVALRTWASMEALAVDRWWVVACDQVRWTPE
                     RLAAWTHRCEEADPAGGRWVVALHHDRLQPLGGWLPDGLRLALAATQERSLMRLMESL
                     PHLALPSPGTEWEDVDTPLERRDFEQGE"
     gene            complement(673..1719)
                     /gene="moaA"
                     /locus_tag="VK150_04430"
     CDS             complement(673..1719)
                     /gene="moaA"
                     /locus_tag="VK150_04430"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: protein motif:HMM:TIGR02666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HLP30585.1"
                     /translation="MPPFSPTPPSSQLPRMLRLKDGLKDGLGRGITYLRVSVTEQCNL
                     ACVYCKPRTGVPERSAAPAMSRNEVVRLVKVFTSLGIRKVRLTGGEPLLRRDLETIIA
                     GISPEVEGRVHLTTNGLSLARRARGLRDAGLSGVNISLDAADRSTFEKLTRKDALGKV
                     LAGMEAARAVGLKTKLNAVVLRGWNEDQIVPLGRLAMQDGIQVRFIEFMPYLGNGWGR
                     DQFMPAAEILQTLREGLGAELEEEPALGLEEGPARLFRIPGSDGKVGVISTLSADFCD
                     RCNRVRLTSQGEMKACLFGNQPVDLLEPLRNHASHEDLVHLIRTALAEKLDCHPMRRG
                     NTPQLGQGMWQVGG"
     gene            complement(1798..>2996)
                     /locus_tag="VK150_04435"
     CDS             complement(1798..>2996)
                     /locus_tag="VK150_04435"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HLP30586.1"
                     /translation="PVAPTVLSLGWPDGTKALPESVQVPPRPDFLDFSFDTGAPLAPA
                     AVRYEAYLQGVDAGWRPVNKGLTLQYRNVGAGSYRLRLRSTVDGAAWEESRPVYVDVL
                     PAWHEQWLVRGFLALAIIGILGWILWLRVHTLAERSRALEETIDQRTLMLARQNRALE
                     HAHEQIKRSLEGRLKLLDMVTHDLRSPLTTILLTLDRLRDMVPENTTFLDVMEREAHR
                     IEGLVRNLLDQSRSEALIQGLKLVPTLPVEVTEGFEEVLRLKAEVKGLAFKVEISPET
                     ERVRIEADTATLHQVMLNLFENALKFTPSGGKVGLRSLVDREAGTWSLAVWDTGRGLD
                     EAQIREVLQPFRQTRPSDAAHGWGLGLSICQSIAEAHRGELQVESEPGKGATFRLVLP
                     LMPEEP"
BASE COUNT          450 a          998 c         1082 g          466 t
ORIGIN      
        1 gtgcggaagc acctgggatg acggtgcgga agcacctggg atgacggtgc ggaagcacct
       61 ggcttgatgg tgcggaagca cctggcgccg aagcgccagg gccgagggac tattcgccct
      121 gttcgaaatc tcgccgctcc agcggcgtgt ccacgtcttc ccattcggtc cccggtgagg
      181 ggagggcgag gtggggcagg gattccatca gccgcatcag ggaccgttcc tgggtggctg
      241 cgagggccag gcgcaggccg tcgggaagcc agccgcccag gggctggagg cggtcgtggt
      301 gcagagccac gacccagcgc ccgccggccg ggtcggcctc ctcgcagcga tgtgtccagg
      361 ccgccagccg ctcaggcgtc cagcgcacct ggtcacaggc gaccacccac cagcggtcca
      421 cggcgagagc ctccatggag gcccaggtgc ggagggccac cgcaggccct tcccggggat
      481 cgtccacgca gggaaggccg ggccggtccg ggaggggctc gcccagcagc tggaccggcg
      541 cgccggggaa gacagcttca aacacccgca ccaggtgccc gccccaggaa ccgccccccg
      601 ggtggggaag ggcatgcttg gcgccgccca tgcggtggcc cgcgccgccg gtcaggagca
      661 gcagccccgc cctcatccac ccacctgcca catgccctgg ccgagctgcg gggtgttgcc
      721 gcgccgcatg gggtggcagt ccagcttctc ggcgagagcc gtgcggatga gatggacgag
      781 atcctcgtgg gaagcgtggt tccggagggg ctccagcagg tccacgggct ggttcccgaa
      841 gaggcaggcc ttcatctcgc cctggctcgt gaggcgcacc cggttgcagc ggtcgcagaa
      901 atcggcgctg agggtggaga tgacgccgac tttcccatcg ctgcccggga tgcggaacag
      961 cctcgccggg ccttcctcca gtccgagggc gggttcctcc tccagctcgg caccgaggcc
     1021 ttcgcggagg gtctggagga tctccgcggc gggcatgaac tggtcccggc cccacccgtt
     1081 gcccaggtag ggcatgaact caatgaaacg cacctggatg ccgtcctgca tggcgagtcg
     1141 gccgaggggt acgatctggt cctcgttcca gccccgcagc accacagcgt tgagcttggt
     1201 cttgaggccc acggcccggg cggcctccat ccccgcgagc accttgccca gggcgtcttt
     1261 ccgggtgagc ttctcgaagg tgctccgatc ggccgcatcc aggctgatgt tgaccccgga
     1321 aagtcccgcg tcgcgcaggc cccgagccct ccgggcgagg ctgagcccgt tggtggtgag
     1381 gtggacacgg ccctccactt ctgggctgat gccggcgatg atggtctcga ggtcgcggcg
     1441 cagcagtggc tcgccacccg tgaggcgcac cttccggatg cccaggctgg tgaacacctt
     1501 cacgaggcgc accacctcgt tgcggctcat ggccggagcc gcggatcgct ctggaacccc
     1561 cgtccgcggt ttgcagtaca cacacgccag gttgcactgc tcggtcaccg acacgcggag
     1621 atacgtgatg ccgcgcccga ggccgtcttt cagaccatcc ttcagccgca gcatgcgtgg
     1681 cagttgactg gaaggtgggg tgggagagaa gggcggcacg gcggctccgg acccttccag
     1741 gatgcaggga accgacctcg gcatggcggg ttcgtgccca acgtcacagg gaggcgctca
     1801 tggttcctcg ggcatgaggg gcagcaccag gcggaaggtc gcgcccttcc cgggttcgct
     1861 ctcgacctgc agttcgccgc gatgggcttc ggcgatgctc tggcagatgg agaggccgag
     1921 cccccagcca tgggcggcat cgctgggccg tgtctggcgg aagggctgga ggacctcgcg
     1981 gatctgcgcc tcgtccagtc cgcggccggt gtcccagacg gcgaggctcc aggtgccggc
     2041 ttcgcggtcg accagggatc ggaggccgac cttcccgccg gacggcgtga acttgagcgc
     2101 gttctcgaag aggttcagca tcacctggtg cagcgtggcg gtgtcggcct cgatccgcac
     2161 ccgctcagtc tccggcgaga tctccacctt gaaggcaagg cccttcacct cggccttcag
     2221 gcggagcacc tcctcgaatc cctccgtcac ttccacaggc agcgtcggca ccagcttgag
     2281 gccttggatg agcgcctcgg agcggctctg gtcgagcagg ttccggacca gcccctcgat
     2341 gcggtgggcc tcccgctcca tgacgtccag gaaggtcgtg ttctcgggaa ccatgtcgcg
     2401 gaggcggtcc agggtgagca ggatggtggt gaggggcgag cgcaggtcgt gggtgaccat
     2461 gtcgaggagc ttgagccgtc cttcgaggct gcgcttgatt tgctcatggg catgttccag
     2521 ggcccggttc tggcgcgcca gcatcagggt gcgctggtcg atggtttctt ccagcgcgcg
     2581 ggaccgctcc gcgagcgtgt ggactcgaag ccagaggatc cagcccagga tgccgatgat
     2641 ggcgagggcg aggaagccgc ggacgagcca ctgctcgtgc caggccggaa gcacgtcgac
     2701 gtagacgggg cggctctcct cccaggcggc gccatccacg gtgctgcgga ggcggagccg
     2761 gtagctgccc gcccccacgt tccggtattg gagggtgagc cctttgttca ccggcctcca
     2821 gcccgcgtcc actccctgaa ggtaggcctc gtaccgcacg gcggcgggcg ccaggggagc
     2881 gcccgtgtcg aagctgaagt ccaggaaatc ggggcggggc ggaacctgga cggattccgg
     2941 cagggccttc gtgccatcgg gccagccgag actcagcacg gtgggcgcga cgggtc
//
LOCUS       DATGWW010000299         2972 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_22488, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000299 DATGWW010000000
VERSION     DATGWW010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2972
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22488"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1525)
                     /locus_tag="VK150_04440"
     CDS             complement(<1..1525)
                     /locus_tag="VK150_04440"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HLP30587.1"
                     /translation="MILLPKASMIHQLLRTKPIEQIRANTEEPEQGKLRRTLTAWDLA
                     LLGVGAIIGAGILSALGTGLAGGFDATFGVTRPAAGPALIISFLMTALACGFTALCYA
                     EFASMIPASGSAYTYTYATLGELMAWIIGWDLLLEYAVSNVAVAISWGSYMDNLLRGL
                     GLHIPRWLSMDPRTMMFPTEAFAASHQGALHFADKLHYLAQAKAGALDGAAVFLNWEV
                     LKTAPTLGGLPLGMNLLAMLITIAITALCVWGVKESVRANNIMVTVKVVLLLMVIAIG
                     AFYVKPENFHPFAPNGWKGIQAGAAIIFFAFIGFDAVSTTAEECRDPSRDMPRGIIGS
                     LIICTVIYVGVCTVVAGILPYSAYHGIADPIAHAFTAIGMNRISAIVSIGAVVALGSA
                     LLVYQMAQPRIFMVMSRDGLLPPWFGTVSPRFRTPLNATLLTGVIVLLPAGFMNIDEI
                     IELTNIGTLFAFILVCAGILVLRVRRPLAERRFRAPAVWLTAPLGIVFCLWLALGLPR
                     "
     gene            1961..2902
                     /locus_tag="VK150_04445"
     CDS             1961..2902
                     /locus_tag="VK150_04445"
                     /inference="COORDINATES: protein motif:HMM:NF013998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HLP30588.1"
                     /translation="MRLWSDRRLRLSLTGLGAQYLLALMAVGAFSVNTGNNLLYLVFS
                     LMLGLFLVSGILSRRALQGLKVVDIEGGNLFARVRGGLRLRLLDQHRGRLRGLELHLG
                     MDDTTVEPGFLGATRKDGDALVVLQARAAHRGWSRVRALELRTRFPFGLLEKSRFIAL
                     DEPILVLPHPRTPPAKPASWRGEGHRSLAQEGTSSPEGARPLRLGDPPGRVHWKRTAQ
                     RSQPWVRTFEEERPLGLHLRLDLTAWAPGRPFERELERLSGAVLQARLQKRESSLEVQ
                     SEEGLREVHGHAACWRALALAQATGNQEDGSEPAPLS"
BASE COUNT          473 a          988 c         1105 g          406 t
ORIGIN      
        1 ggcgcggcag gcccagggcc agccagaggc agaacacgat gccgagtggc gccgtgagcc
       61 acaccgccgg cgcccggaag cgccgctcgg cgaggggccg ccggacccgc agcaccagga
      121 tccccgcgca gaccaggatg aacgcgaaga gggtaccgat gttggtcagc tcgatgatct
      181 cgtcgatgtt catgaacccg gcgggcagca ggacgatgac gccggtgagc agggtcgcgt
      241 tcaggggtgt gcggaaccgg gggctgacgg tcccgaacca gggcggcagc aggccgtcgc
      301 ggctcatcac catgaaaatg cggggctggg ccatctggta gaccagcagc gcgctgccca
      361 gggccaccac ggccccgatg ctcacgatgg ccgagatccg gttcatgccg atggccgtga
      421 aggcatgggc gatgggatcg gcgatgccgt ggtaggcgct gtagggaagg atgcccgcca
      481 ccaccgtgca gacgcccacg tagatcaccg tgcagatgat caggctgccg atgatgcccc
      541 ggggcatgtc gcgggaggga tcccggcatt cttccgccgt ggtgctgacg gcatcgaagc
      601 cgatgaaggc gaagaagatg atggccgcgc ccgcctggat gcccttccac ccgttggggg
      661 cgaaggggtg gaagttctcc ggcttcacgt agaaggcgcc gatggcgatc accatgagga
      721 gcagcaccac cttcaccgtc accatgatgt tgttggcgcg gacgctttcc ttcacgcccc
      781 acacgcagag tgcggtgatg gcgatggtga tgagcatggc cagcaggttc atgcccaggg
      841 gcagcccgcc gagggtgggc gccgtcttca gcacctccca gttgagaaag acggccgcgc
      901 cgtcgagcgc gccggccttg gcctgggcca ggtagtgcag cttgtcggcg aagtgcagcg
      961 cgccctggtg cgaggcggcg aaggcctcgg tggggaacat catggtgcgc ggatccatgc
     1021 tcagccagcg ggggatgtgc aggcccaggc cccgcagcag gttgtccatg tagctgcccc
     1081 agctgatggc caccgccacg ttggacacgg cgtattccag cagcaggtcc cacccgatga
     1141 tccaggccat cagctcgccc agggtggcgt aggtgtaggt gtaggcgctg cccgaagcgg
     1201 gaatcatgct ggcgaactcg gcgtagcaga gcgcagtgaa gccgcaggcc aaggccgtca
     1261 tcaggaagct gatgatgagg gccggcccgg cggcgggccg cgtgacgccg aaggtggcgt
     1321 cgaagccccc cgccaggccc gtgcccaggg ccgagaggat gcccgcgccg atgatggcgc
     1381 ccacgcccag cagggccagg tcccaggcgg tgagcgtccg ccggagcttc ccctgttcgg
     1441 gttcctccgt gttggcgcgg atctgctcga tgggtttggt gcgcagcagc tgatggatca
     1501 tggaggcctt ggggagaagg atcatgctat caggcgggct ccgggcgtta cgcttagggc
     1561 catgagcacg aagcaggagc aggggctcca tgtccacgag ccggggggag tgggaggacg
     1621 gcgcagcgcg ctgtccgatg aatggaaggt cacgttggcg cagccgaagc ccgaagggcg
     1681 cggcgcaggg cggctccgcc tcggcaagtg gagcgcgccg gagcgcgcac cgcgtgcgat
     1741 aggtggaggt gccgcgtgag gccgcagcag gagcgaaggc ccactttggc gaagccgaag
     1801 cccgaagggc gcggcactgg aggtgccgcg tgatgccgca gcaggagcga aggcccactt
     1861 ttgcgcagcc gaagcccgaa gggcgcggcg cagggaggct ccgcctcggc aagcggagcg
     1921 cgccggagcg cgcaccgcgt gcgataggtg gaggcgccgc gtgaggctct ggagcgaccg
     1981 ccgcctgcgc ctgtccctca cggggctcgg cgcgcagtac ctgctggccc tgatggcggt
     2041 gggggccttc tccgtcaaca ccgggaacaa cctgctctac ctggtgttct ccctcatgct
     2101 cgggctcttc ctggtctcgg gcatcctcag ccgccgggcc ctgcaggggc tgaaggtggt
     2161 ggatattgag ggcggcaacc tcttcgcgcg ggtgcgcggc ggcctccggc tgcgcctgct
     2221 ggaccagcac cggggacggc tccgcggcct cgagctgcat ctgggcatgg acgacaccac
     2281 cgtggagccg ggcttcctcg gcgccacccg caaggatggc gacgccctcg tggtgctcca
     2341 ggcccgggcc gcgcaccgcg gctggagccg ggtgcgagcg ttggagctcc gcacccgctt
     2401 ccccttcggc ctgctggaga aatcccgttt catcgcgctg gacgagccca tcctggtgct
     2461 gccccacccc cgcacgcccc cggccaaacc cgccagctgg cgcggcgagg ggcaccgatc
     2521 cctggcccag gagggcacca gcagccccga aggcgcccgc cccctgcggc tgggcgaccc
     2581 gccggggcgg gtccactgga agcgcacggc ccagcgcagc cagccctggg tgcgcacctt
     2641 cgaagaggaa cgtcccctcg ggcttcacct gcggctggac ctcaccgcct gggcccccgg
     2701 ccgccccttc gagcgggagc tggagcggct ctcaggcgcc gtcctgcagg cccggctcca
     2761 gaagcgcgag agcagcctgg aggtgcagag cgaggagggc ctgcgggagg tccacggcca
     2821 cgccgcctgc tggcgggccc tggcgctggc ccaggccacc gggaaccagg aggacggatc
     2881 cgagccggct ccgttaagct gaagtcccgt tggaggttct ggtgttcgac gacccgcagt
     2941 cccccgcctg gacccccctg ctggaagcgg cc
//
LOCUS       DATGWW010000300         4065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_295845, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000300 DATGWW010000000
VERSION     DATGWW010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4065
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295845"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2050
                     /locus_tag="VK150_04450"
     CDS             <1..2050
                     /locus_tag="VK150_04450"
                     /inference="COORDINATES: protein motif:HMM:NF018190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HLP30589.1"
                     /translation="PVLDGRLDDPVWAQAPTVSGFETFIPEFGKKQAEQTIAYMAYDE
                     EHLYFAFRCLDPQPERIKASLTRRDDIASSDFVCINLDTFNDQQSLYAFYVTPAGVQG
                     DSRFASNKEDFSVDLVWDSAARMDADGYTVELRIPLKSIRYLHRPKVEMAVFFERTIN
                     RRQEHGSFPALDPKRGYAFLPQMAVLEYEGLARPTVLELLPAFTLSRRSTREDGLMVR
                     HPDDRAWSLTGKYGLTPSLILDATVNPDFSQVEADAGQVDANLRSGLFFAEKRPFFLE
                     GSEAFNIAASQTGPLPAILHSRTIVDPKWGAKVSGKLGRSDTIALLAAADTADPAAGN
                     PADPRITVLRYRRSTLEDGYLGAFLSARDQGPRTNRVLGPDGQIRLSPASQLGFHAFG
                     SFTEDGISPEKRKGRALGLEYLYDTSRLAITADAHDLSRDFIADAGYITRTGLTSTEL
                     KVTPRFYPASSWLRRLDPFVGYATLRDHPSGLRESDATIGLSTTFQGNGSATIQWDDA
                     TEVFLGQRFQTDGLRLSARSQFTKTFSLQGSHWRGKGIRYTAEPFQGRGSQTALAAVY
                     QPGESLNLTLNWTHADFYRESTGEKIYSYPIGRCRVTYQFSHAFFLRAIAEYNGYRRQ
                     LLTDFLASYTYIPGTVIYLGYGTLAKKQLWENGMYRPSEHFMDMQRGLFFKASYLWRL
                     "
     gene            complement(2057..>4065)
                     /gene="uvrA"
                     /locus_tag="VK150_04455"
     CDS             complement(2057..>4065)
                     /gene="uvrA"
                     /locus_tag="VK150_04455"
                     /inference="COORDINATES: protein motif:HMM:TIGR00630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HLP30590.1"
                     /translation="YGACPTCDGLGFKRQFAEELIIPNPALSINEGAIQASGWKSVSE
                     DGWRSQLMEQLARKMKFSLDTPWKKLPADIRRLLLHGTEKEMRFTYESKRNRYDFVHH
                     FEGIIGNLDRRYRETTSEEIQAEMEQSMRIIPCEDCGGQRLKPEVLAVYVGGMNVAQV
                     VGMSVRDSRKWFGELGLEGKDAVIAEKVLKEIRERLGFLDDVGLGYLTLDRSAATLSG
                     GEGQRIRLATQIGSKLQGVLYVLDEPSIGLHQRDNLQLIKTLQEMRDLGNTVLVVEHD
                     LETILAADHVVDMGPGAGEHGGRVVAQGTPQEISRTAGSVTGDFLSGRDSIPVPRVRR
                     KAKRGQLSIVGAEENNLKKVDADFPIGLFTCVTGVSGSGKSTLVNEILYKALANQLHQ
                     GVHIVGKHKAIKGLEAVDKVIDIDQAPIGRTPRSNPATYTGLFTPLRELFAQLPESKA
                     RGYAPGRYSFNVKGGRCEKCEGDGVLKIEMHFLPDVYVTCEQCKGKRYNRETLEIHYK
                     GRSISDVLNMTVEEALELFAPIPVLANKLQTLMDVGLGYIRLGQSATTLSGGEAQRVK
                     LGKELSKRATGRTVYILDEPTTGLHLKDIQKLLEVINRLVETGNTIIVIEHNLDVIKT
                     ADWILDLGPEGGGEGGRVIAVGTPEDIAKRKTSVTGRYLAPYLK"
BASE COUNT          630 a         1441 c         1253 g          741 t
ORIGIN      
        1 gccagtgctc gacgggcggc tggatgatcc tgtgtgggcc caggcaccga ccgtcagcgg
       61 cttcgagacc ttcatcccgg aattcggcaa gaagcaggcg gagcagacca tcgcctacat
      121 ggcctacgac gaggagcacc tctacttcgc cttccggtgc ctggatccgc agcccgaacg
      181 catcaaggcc tcgctcaccc ggcgggatga catcgccagc agcgacttcg tctgcatcaa
      241 cctggacacc ttcaacgacc agcagtccct gtacgccttc tacgtgactc ccgccggcgt
      301 ccagggcgac agccgcttcg ccagcaacaa ggaagacttc agcgtggacc tggtctggga
      361 cagcgccgcc cgcatggatg ctgacggcta caccgtggag ctccggattc ccctgaagag
      421 catccgctac ctgcaccggc cgaaggtcga aatggccgtc tttttcgagc gcaccatcaa
      481 ccgccgccag gagcatggtt ctttccccgc cctggatccc aagcgcggct acgccttcct
      541 gccccagatg gccgtccttg aatacgaagg tctggcccgg cccaccgtcc tcgagttgct
      601 ccccgctttc accctcagcc ggaggtccac ccgggaggac ggcctcatgg tgcgccaccc
      661 cgatgaccgg gcgtggagcc tcaccggaaa atacggcctc acccccagcc tcatcctgga
      721 tgccaccgtg aatcccgatt tctcgcaggt ggaggccgat gccggacaag tggacgccaa
      781 cctgcgatcg ggcctgttct tcgcagagaa gcgtcccttc ttcctggagg gcagcgaggc
      841 cttcaacatc gccgcttcgc agaccgggcc ccttccggcc atcctgcatt cgcgcaccat
      901 cgtggatccc aagtggggtg ccaaggtgtc cggcaaactc ggccgcagcg acaccattgc
      961 cctcctggcc gcggcggaca ccgccgatcc cgccgccggc aaccccgcgg atccccggat
     1021 cactgtcctc cgctaccgcc gcagcaccct ggaggacggc tacctcggcg ccttcctctc
     1081 agcccgggat cagggaccac gaaccaaccg ggtgctgggt cccgacgggc agatccgcct
     1141 gtcacccgca tcgcagctcg gattccatgc cttcggttcc ttcaccgaag atgggatctc
     1201 gcctgaaaaa cggaagggcc gcgccctggg cctcgaatac ctctacgaca ccagccgcct
     1261 ggccatcacc gccgacgccc acgacctcag ccgcgacttc atcgccgacg cgggctacat
     1321 cactcgcacc ggactcacct ccaccgagct caaggtcacc cccaggttct atccagcttc
     1381 ctcgtggctg cgacgactcg atcccttcgt gggctacgcc accctgcggg accatcccag
     1441 cggcctccgg gaatccgacg ccaccattgg cctctccacc accttccagg gcaacggctc
     1501 ggccaccatc cagtgggatg acgccaccga ggtgttcctc gggcagcgct tccagaccga
     1561 cggcctgcgc ctctccgcgc gcagccagtt caccaagacc ttctcgctgc agggctccca
     1621 ctggcgcggc aagggcatcc gttacacggc ggagcccttc cagggccgcg gctcccagac
     1681 ggcactggcc gccgtctacc agccggggga atccctgaac ctcaccctga actggaccca
     1741 cgccgatttc taccgcgagt ccacgggcga gaagatctac tcgtacccca tcggccgctg
     1801 ccgcgtcacc taccagttca gccacgcctt cttcctgcgc gccatcgccg agtacaacgg
     1861 ctaccggcgc cagttgctga ccgatttcct ggcctcctac acctacatcc ccggcaccgt
     1921 catctacctc ggctacggca ccctggccaa gaagcaactc tgggagaacg gcatgtaccg
     1981 gccctccgag cacttcatgg acatgcagcg gggactgttc ttcaaggcgt cgtatttgtg
     2041 gcggttgtag ctcccgctat ttgaggtacg gcgccaggta ccgccccgtc acgctggtct
     2101 tccgcttggc gatgtcctcg ggcgtgccca cggcgatgac gcggccgccc tcgccgccgc
     2161 cttcggggcc caggtcgagg atccagtcgg cggtcttgat gacgtccagg ttgtgctcga
     2221 tgacgatgat ggtgttgccg gtctccacca atcggttgat gacctccagc agcttctgga
     2281 tgtccttgag gtgcagaccc gtggtgggct cgtccaggat gtagacggtg cggcctgtgg
     2341 cgcgcttgct cagctccttg cccagcttca cgcgctgggc ctcgccgccg gagagcgtgg
     2401 tggcgctctg gcccaggcgg atgtagccga ggcccacgtc catgagggtc tgcagcttgt
     2461 tggccagcac ggggatgggc gcgaagagtt ccagcgcctc ctccaccgtc atgttcagca
     2521 cgtcggagat gctgcgtccc ttgtagtgga tttccagggt ctcgcggttg taccgcttgc
     2581 ccttgcactg ctcgcaagtg acgtagacat cggggaggaa gtgcatctcg atcttgagga
     2641 cgccgtcgcc ctcgcacttc tcgcagcggc cgccctttac gttgaagctg tagcggccgg
     2701 gcgcgtagcc ccgggccttg ctctcgggca gctgggcgaa gagctcacgc agaggcgtga
     2761 agaggcccgt gtaggtggcg gggttgctgc ggggcgtgcg gccgatgggc gcctggtcga
     2821 tgtcaatgac cttgtccacg gcctcgaggc ccttgatggc cttgtgcttg cccacgatgt
     2881 ggacgccctg gtgcagctgg ttggcgaggg ccttgtagag gatctcgttc accagggtgc
     2941 tcttgcccga tccgctgacg ccggtgacgc aggtgaagag gccgatgggg aaatccgcgt
     3001 ccaccttctt gaggttgttc tcctcggcgc ccacgatgga cagctggccg cgcttggcct
     3061 tgcggcgcac ccgcggcacg gggatgctgt cccggcccga caggaagtcg cccgtgaccg
     3121 aacccgccgt gcggctgatc tcctggggcg tgccctgggc caccacgcgg ccgccgtgct
     3181 cgccggcgcc ggggcccatg tccaccacgt ggtccgcggc gaggatggtc tccaggtcgt
     3241 gctcgaccac cagcacggtg ttgcccaggt cgcgcatctc ctgaagggtc ttaatgagct
     3301 ggaggttgtc ccgctggtgc aggccgatgc tcggctcgtc cagcacgtag agcacgccct
     3361 gcagcttgct gccgatctgg gtggccaggc ggatgcgctg gccctcgccg ccggagagcg
     3421 tcgcggcgct gcggtccagg gtcaggtagc caaggcccac gtcatccagg aagcccagcc
     3481 gctcccggat ctccttcagc accttctcgg cgatgaccgc gtccttgccc tcgaggccca
     3541 gctcgccgaa ccacttccga gagtcgcgca cgctcatgcc caccacctgg gccacgttca
     3601 tgccgcccac gtagacggcc agcacttccg gtttcaggcg ctgcccgccg cagtcctcgc
     3661 aggggatgat gcgcatggac tgctccatct ccgcctggat ctcctcgctg gtggtctcgc
     3721 ggtagcggcg gtccaggttg ccgatgatgc cttcgaagtg gtgcacgaag tcgtagcggt
     3781 tgcgcttgct ctcgtaggtg aagcgcatct ccttttcggt gccgtggagc agcaggcgcc
     3841 ggatgtcggc cgggagcttc ttccagggcg tgtcgagact gaacttcatc tttcgggcca
     3901 actgctccat gagctgcgag cgccagccgt cttcgctcac gctcttccag ccgctggcct
     3961 ggatggcgcc ctcattgatg gagagggcgg ggttggggat gatcagctct tcggcgaact
     4021 ggcgcttgaa gcccaggccg tcgcaggtgg ggcaggcgcc gtagg
//
LOCUS       DATGWW010000301         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_107892, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000301 DATGWW010000000
VERSION     DATGWW010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107892"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1110)
                     /locus_tag="VK150_04460"
     CDS             complement(<1..1110)
                     /locus_tag="VK150_04460"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crosslink repair DNA glycosylase YcaQ family
                     protein"
                     /protein_id="HLP30591.1"
                     /translation="MTHPIPTLTADQAARLFLGAQGLLDDPARRVTTASLQKLIENLG
                     FVQVDTINVVARAHDLTLASRLDGYRPEHLRKLLEDKRSLFEGFTHDASAIPTAWFAH
                     WKPRFARDRDRMHAHAWWQHHFRGTEGGRVVADVKARIEREGPLKSSDFEHPEKRGPW
                     WGWKPQKAALDFLWRSGELMIPRREGFQKVYDLTERVLPEQHALPCPEPATHVEWACA
                     GAAERLWVFTPKELADFWASIEATEAKAWCSAAAKAGRIVPVAVESVEGELRPAYALP
                     DWETRLAKLPEPPQRTRLLCPFDPILRDRTRALRRFGFDYRFEAFVPEPKRQYGYFVL
                     PILEGDRLVGRLDPKLHRDQGVLEIKGLWWEAGVRP"
     gene            complement(1180..>2029)
                     /locus_tag="VK150_04465"
     CDS             complement(1180..>2029)
                     /locus_tag="VK150_04465"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD/NAD(P)-binding oxidoreductase"
                     /protein_id="HLP30592.1"
                     /translation="ACHAAERGHVVTLFEAGPELGGQLNLAKRVPGKEEFFETLRYFG
                     RRLATAGVTLRLGERATVDALAGFDEVILASGVQARVPDIPGVDHPKVISYPDLLSGR
                     KVAGPTVAIIGAGGIGFDVAEFLVHSGHAPAVAPYLKDWGVDGAHAHRGGLLPSPEPP
                     EPARKVFLLQRKTERMGADLGKTTGWIHRAGLKAMKVKMQGGIHYERIDDEGLWIRDG
                     KDAGAKCLAVDSIILCAGQVSERSLVEPLRAAGKTVHLIGGADLAAELDAQRAIRQGA
                     ELAAKI"
BASE COUNT          294 a          687 c          743 g          305 t
ORIGIN      
        1 ggggcggacg cccgcctccc accagaggcc cttgatctcc agaaccccct gatcgcggtg
       61 gagcttggga tccaggcggc ccacgaggcg gtcgccttcg aggatgggca gcacgaagta
      121 gccgtactga cgcttgggct cgggcacgaa ggcctcgaag cggtagtcga agccgaagcg
      181 gcgcagggcg cgcgtccggt cgcggaggat ggggtcgaag gggcagagca ggcgggtgcg
      241 ctggggcggc tccggcagct tcgccagccg ggtttcccag tccggcaggg cgtaggccgg
      301 gcggagctct ccctccacac tctcgactgc cacggggacg atgcggccgg ccttggcggc
      361 ggcggaacac caggccttgg cctccgtcgc ctcgatggaa gcccagaaat ccgccagctc
      421 cttcggggtg aacacccaca ggcgctccgc cgcgccggcg caggcccact cgacgtgggt
      481 ggcgggctcc gggcagggca gggcgtgctg ctcgggcagg acgcgctccg tgaggtcgta
      541 gaccttctgg aagccctccc gccgggggat catcagttcg ccgctgcgcc acaggaaatc
      601 gagggccgcc ttctgcggct tccagcccca ccagggaccg cgcttttccg ggtgctcgaa
      661 atccgaggac ttgaggggcc cctcccgctc gatgcgggcc ttcacgtccg ccacgacccg
      721 gccgccctcg gtgccccgga aatggtgctg ccaccaggcg tgggcgtgca tgcggtcgcg
      781 gtcgcgggcg aaacgtggtt tccagtgggc gaaccaggcc gtgggaatcg ccgaggcgtc
      841 gtgggtgaac ccctcgaaga ggctccgctt gtcctccagg agcttccgca ggtgctcggg
      901 ccggtaaccg tccaggcggc tggcgagggt caggtcgtgg gcccgggcca ccacgttgat
      961 ggtgtccacc tgcacgaagc ccaggttctc gatgagcttc tgcagcgagg ccgtggtcac
     1021 ccgccgggcg ggatcgtcca gcaggccctg ggcgcccagg aagaggcggg cggcttgatc
     1081 ggcggtgagg gtcggaatgg gatgggtcac ggatgaactc ggatgaaccc tgattgaatc
     1141 aggatccgcg ttcatccgtg ttcatccgtg gcgaaaaaat caaatcttcg cggctaactc
     1201 cgccccctgc cggatggcgc gctgggcgtc cagctcggcg gcgaggtcgg cgccgccgat
     1261 gaggtggacg gtcttcccgg cggcgcgcag gggctccacc aggctgcgct cggagacctg
     1321 gcccgcgcag aggatgatgc tgtccacggc gaggcacttg gcgcccgcgt ccttgccgtc
     1381 gcggatccag agcccctcgt cgtcgatgcg ctcgtagtgg atgccgccct gcatcttgac
     1441 cttcatggcc ttgagtccgg cgcggtggat ccagccggtg gtcttgccca ggtccgcgcc
     1501 catgcgctcg gtcttgcgct ggaggaggaa caccttccgg gcgggctccg gcggctctgg
     1561 gcttggcagg aggccaccgc ggtgggcatg ggcgccatcc accccccagt ccttcaggta
     1621 gggggccacc gctggagcat gccccgaatg caccaaaaac tcggcgacgt cgaagccgat
     1681 gcccccagcg ccgatgatgg ccacggtcgg gcccgccacc ttccggcccg aaagcaggtc
     1741 cgggtagctg atgaccttgg gatggtccac gccggggatg tcgggcacgc gggcctggac
     1801 gccggaggcg aggatcactt cgtcgaaacc cgccagcgcg tcgaccgtgg cccgctcgcc
     1861 cagacgcagg gtcacgccgg cggtggcgag gcggcggccg aagtagcgca gggtctcgaa
     1921 gaactcctcc ttgcccggca cgcgcttggc caggttcagc tgcccgccca gctcggggcc
     1981 cgcttcgaag agggtgacca cgtggccccg ctccgcggcg tggcaggcg
//
LOCUS       DATGWW010000302         2388 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_69292, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000302 DATGWW010000000
VERSION     DATGWW010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69292"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="VK150_04470"
     CDS             <1..315
                     /locus_tag="VK150_04470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30593.1"
                     /translation="FGQHKGYGTALHRARIGALGVSPAHRISYAPVAALQQVDEDLRD
                     ALRHSLDRCTSLVELRAWVEAELKPSYGRLKLVWVETLRRRYAERMAQMASAEGLSGE
                     PE"
     gene            312..704
                     /locus_tag="VK150_04475"
     CDS             312..704
                     /locus_tag="VK150_04475"
                     /inference="COORDINATES: protein motif:HMM:NF026165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HLP30594.1"
                     /translation="MTEVVLALIRRGDRWFLQRRDPANPVLPGLWEFPGGKAGPGEAL
                     IDALRRELREEVGVDLLDARPWPVLEGPVRLHPFEVTTGAAPHTPLAWGWFTPREMAR
                     LSVPPRNHALIARLAGATDAFPGADLIT"
     gene            730..2019
                     /locus_tag="VK150_04480"
     CDS             730..2019
                     /locus_tag="VK150_04480"
                     /inference="COORDINATES: protein motif:HMM:NF015980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30595.1"
                     /translation="MPRCLIRTFLCALAVFLGAGLAAQQTEVVLSATSSAKLVLAMTS
                     PKVSGLDEATVGTEFTAVLRRDLDETGVIAMLQERLPADGAPTKAWREAGAQWLLNTR
                     LTRAANGDLQLEATALDTAAEKGVFTRTYNANKIVPVRYLAHYLADDLVGRLTGEKGV
                     ASSRIVFVRQTSPGVKEIFQVDRDGAGLIPLTRHGSLTLSPTVAGDGRLAYVTYKGGA
                     PEIWGQRRKDGPHEKLYPVGGGGGLVSSPAWSPDGKRLAFVQGDRRGNSDIMVLDLAT
                     GRVRRLTDGNGINTEPSWNPAGTQLAFTSDREGGPQVFLMQDDGSNLRKLTTEGLYNA
                     SPSWSPNGAMVAYVSRFEGKFDLFIYKLGEGKAYQITTGVSTSESPAWSPDERRLVFT
                     SNRFGASQLFTTDLSGRQILRMSELGGCQSPRWLRGR"
     gene            2085..>2388
                     /locus_tag="VK150_04485"
     CDS             2085..>2388
                     /locus_tag="VK150_04485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30596.1"
                     /translation="MRYGTYVVPAAIVLTLGSLACKPPKTAEQIKAETQAAFAEGVQA
                     FKDGKARETNPYVNDKENPHKMQGWYDGWDKAKADKDAADKAAADKAAADKAAADAK"
BASE COUNT          392 a          869 c          800 g          327 t
ORIGIN      
        1 ttcgggcagc acaagggcta cggcacggcg ctccaccggg cccgcatcgg cgccctgggc
       61 gtgagcccgg cacaccgcat cagctacgcc ccggtggcgg cgctgcagca ggtggacgag
      121 gacctgcggg acgcactccg ccacagcctg gaccgctgca cctcgctggt cgaacttcgg
      181 gcctgggtgg aggcggagct gaagccctcg tacggccggc tgaagctggt gtgggtcgag
      241 accctgcgcc ggcgctacgc cgagcgcatg gcccagatgg ccagtgcgga agggctctcc
      301 ggggaaccgg aatgaccgag gtcgtcctcg ccctgatccg gcggggcgac cgctggttcc
      361 tccagcggcg ggatcccgcg aaccccgtgc tgccgggcct ctgggagttc cccggcggca
      421 aggccggtcc cggcgaggcg ctgatcgacg cgctgcgccg cgaactccgc gaggaggtgg
      481 gggtggacct tctggacgcc cgcccctggc ccgtcctcga ggggccggtg cgtctccatc
      541 ccttcgaggt gacgacggga gcggccccgc acacgcccct cgcctggggc tggttcacgc
      601 cgcgggagat ggcccgcctg tccgttccgc ccaggaacca cgcgctgatc gcgcggctgg
      661 ccggggccac ggacgcattc ccgggcgccg atctgataac ctgaagttcc ccccaggccc
      721 ggagttttca tgccgcgatg tctcattcgg accttccttt gcgccctcgc agtcttcctg
      781 ggcgcgggcc tcgccgccca gcagaccgag gtggtcctga gcgccaccag cagcgcgaag
      841 ctggtgctgg ccatgacctc cccgaaggtt tccggcctcg acgaagccac ggtcgggacc
      901 gagttcaccg cggtgctaag gcgcgacctc gatgagacgg gcgtcatcgc catgctgcag
      961 gagcggctgc cggcggacgg cgccccgaca aaggcctggc gcgaggccgg ggcccagtgg
     1021 ctcctgaaca ccaggctcac ccgcgccgcc aacggcgacc tccagctgga ggccaccgcc
     1081 ctcgatacgg ccgcggagaa gggcgtgttc acccgcacct acaacgccaa caagatcgtt
     1141 cccgtccgct acctcgccca ctacctggcc gatgacctgg tgggccgcct cacgggtgag
     1201 aagggggtgg cctccagccg catcgtgttc gtgcgccaga cctcgccggg cgtgaaggag
     1261 atcttccagg tggaccgcga cggcgcgggc ctcattcccc tcacccgcca cggcagcctc
     1321 accctctcgc ccacggtggc cggggacggg cgcctggcct acgtgaccta caagggcggc
     1381 gccccggaga tctggggtca gcggcgcaag gacgggcccc acgagaagct ctacccggtg
     1441 ggcggcggcg gcggcctggt gtcctctccc gcctggtccc ccgacgggaa gcgcctggcc
     1501 ttcgtgcagg gcgaccgccg gggcaacagc gacatcatgg tgctcgacct cgccacgggc
     1561 cgggtccggc gcctgacgga cggcaacggc atcaacaccg agcccagctg gaatcccgcc
     1621 ggaacccagc tggccttcac gtccgaccgc gaggggggcc cccaggtgtt cctgatgcag
     1681 gacgacggct cgaacctccg gaagctcacc accgaggggc tctacaacgc cagcccctcc
     1741 tggagcccca atggcgccat ggtggcctac gtttcccggt tcgaggggaa gttcgatctt
     1801 tttatctaca agctggggga gggaaaggcc taccagatca ccactggcgt gagcacctcc
     1861 gagtcccccg cctggtcgcc ggatgagcgc agactggtgt tcaccagcaa ccgcttcggc
     1921 gcctcccagc tcttcaccac cgacctctcg ggccggcaga tcctgcggat gtcggagctc
     1981 ggcggctgcc agagcccccg ctggctccgc ggccggtgaa aaaatatggc aattccctga
     2041 gtgacgtcca tctatactca aatccatcct ggaggaacaa ccccatgcga tacggaacct
     2101 acgtcgtccc cgccgccatc gtgctcaccc tgggcagcct ggcctgcaag ccgcccaaga
     2161 ccgcggagca gatcaaggct gaaacccagg ccgctttcgc tgagggcgtg caggcgttca
     2221 aggacgggaa ggctcgcgag accaacccct acgtgaacga caaggaaaac ccgcacaaga
     2281 tgcagggctg gtacgacggc tgggacaagg ccaaggccga caaggacgcc gccgacaagg
     2341 ccgccgccga caaggccgcc gctgacaagg ccgccgccga cgcgaagg
//
LOCUS       DATGWW010000303         1536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_69399, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000303 DATGWW010000000
VERSION     DATGWW010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69399"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..723)
                     /gene="recO"
                     /locus_tag="VK150_04490"
     CDS             complement(<1..723)
                     /gene="recO"
                     /locus_tag="VK150_04490"
                     /inference="COORDINATES: protein motif:HMM:TIGR00613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HLP30597.1"
                     /translation="MIRTLAAIVLKAVPYAEGGAVVSFLSEHGERLSGVAKGVKKPTA
                     KWVAAFEPLSMVKVSFFGKEQTDLKRVTRCELAFSPLTLGHLESSLVMACLADLFDRV
                     AREGVEDDRLYRLLSACGRALKADPDNALGILAYAEHWLLHCMGLLPHPRLCGRCGGE
                     TAPLVLLSPDQGWCCSACTPVDRAEALPPDTRDFLRRLRTGGAETAPRVHPEDEAQRA
                     VTALLRGRLLQELGGGLRSYEVL"
     gene            813..1262
                     /locus_tag="VK150_04495"
     CDS             813..1262
                     /locus_tag="VK150_04495"
                     /inference="COORDINATES: protein motif:HMM:NF025173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HLP30598.1"
                     /translation="MPALFRFALILLLAAGPLVAQPGQPLGPRTGRVARALNLTEAQK
                     TAVRGIRDKHQPEMAQRQAAARQAHEALRTALRDAATPEAQLRALHEKASAARFEMML
                     ARRAVHQELQAVLTPEQREKAAELRGMARERMRGHRGQGRGPLGMMG"
     gene            1304..>1536
                     /locus_tag="VK150_04500"
     CDS             1304..>1536
                     /locus_tag="VK150_04500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30599.1"
                     /translation="MRASPLLVWAFTALSLLGQEAPPLLFRQWLGGQEVGGSSLVAKQ
                     EGGARQWTSREWLVLTRLGQEIRQDLEQTARREA"
BASE COUNT          222 a          577 c          538 g          199 t
ORIGIN      
        1 gagaacctcg tagctgcgaa ggccgccccc cagctcctgg aggaggcggc cccgaaggag
       61 ggccgtgacg gcccgctggg cctcgtcctc cggatgcacc cggggcgcgg tctccgcccc
      121 gcctgtcctc aggcgccgga ggaagtcccg ggtgtcgggg gggagcgcct ccgcccggtc
      181 caccggcgtg caggcggaac agcaccagcc ctggtccggg ctgagcagca ccaagggtgc
      241 cgtctcccct ccgcaacggc cgcagagccg ggggtggggc agtaggccca tgcagtggag
      301 cagccaatgt tcggcgtagg ccaggatgcc cagggcgttg tccgggtccg ccttcagggc
      361 ccggccgcag gcgctgagca accggtagag gcgatcgtcc tccacgccct cgcgggccac
      421 gcggtcgaag aggtccgcca ggcaggccat caccaggctg gactccaggt ggcccagggt
      481 cagggggctg aaggcaagct cgcagcgggt gacccgcttc aggtcggtct gctccttccc
      541 gaagaagctc accttcacca tgctcagcgg ttcgaaggcc gccacccact tggccgtggg
      601 cttcttcact cccttggcca cgccggagag ccgctccccg tgctccgaaa gaaaggacac
      661 caccgccccg ccctcggcgt agggcacggc tttcagcacg atggcggcca gggtccggat
      721 cacctctcca gtctgcccgg aattcaacct ccgctcgggc accgggtctc acatgacgag
      781 gcagccgtcc gcccgcctcc aaggagatgc ccatgcccgc cctgtttcga ttcgccctga
      841 tcctcctcct cgccgcgggc cccctggtcg cccagccggg gcagcccctg ggcccccgca
      901 ccgggcgcgt ggcccgggcc ctgaatctga cggaggccca gaaaacggcc gtccggggca
      961 tccgcgacaa acaccagccg gagatggccc agcgccaggc cgccgcgcgg caggcccacg
     1021 aagccctgcg gaccgcgttg cgcgatgccg ccacccctga ggcccagctc cgggccctcc
     1081 acgagaaggc ctccgcagcc cggtttgaga tgatgctggc ccggcgcgcc gtgcaccagg
     1141 aattacaggc ggtgctcacc cccgaacagc gggaaaaggc ggcggagctg cgcggcatgg
     1201 cgcgggagcg gatgcggggc caccgcggcc agggtcgcgg cccgcttggc atgatgggct
     1261 gaggcccggc cggcccgggc cttgggaccg gtagactggg gggatgcgcg catcccccct
     1321 tctcgtctgg gccttcacgg ccctcagcct gctcggccag gaagcccccc ccctcctctt
     1381 ccgccagtgg ctgggcggcc aggaggtggg cgggtcttcc ctggtggcga agcaggaggg
     1441 cggtgcccgc cagtggactt cccgcgagtg gctggtgctc acccgcctgg gccaggagat
     1501 ccgccaggac ctggagcaga ccgcccgccg cgaagc
//
LOCUS       DATGWW010000304         2336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_431288, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000304 DATGWW010000000
VERSION     DATGWW010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2336
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431288"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VK150_04505"
     CDS             <1..414
                     /locus_tag="VK150_04505"
                     /inference="COORDINATES: protein motif:HMM:NF013426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HLP30600.1"
                     /translation="KYHKIDTYAMQVTADLLGIHPVEVNSVVSFYAFLGDRPQGQYVI
                     RLCRTISCAMAEKDRVMRQLENDLGISFGQTTSDGKFTLEWANCIGMCDQGPALLVNE
                     RVFTRVTPESVHAILEECRRAFGQHATERKEVHLA"
     gene            411..1592
                     /locus_tag="VK150_04510"
     CDS             411..1592
                     /locus_tag="VK150_04510"
                     /inference="COORDINATES: protein motif:HMM:NF013662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region domain-containing protein"
                     /protein_id="HLP30601.1"
                     /translation="MSQIPTFNAMPPNLGLQRALAMTPKEIVKEIADSGLKGRGGAGF
                     STGIKWELAAEAVSDRKFILCNADEGEPGTFKDRVILQEYADLVFEGMTIAALAVGAQ
                     EGILFLRGEYTYLRAHLEAVLLARREHHLLGENILGFGSSFDIRIFMGAGAYICGEET
                     GLIECLEGFRGEPRNRPPYPVHRGFLDCPSVVNNVETLAWAACILQRGAPWFRKVGTE
                     MSTGIKIFSISGDCERPGVFEFPMGITVKELLRHVGGEDARAVQIGGASGQCIPASQF
                     DRAIAFEDIPTGGSVIVFGPQRDMLDVIENFLGFFADESCGQCTPCRLGNRKLLEGVK
                     MLKAGTCSMAYLNELCALGETMMIASKCGLGQSSPCAFLSVVRNFREELMGRAHTLTH
                     A"
     gene            1609..>2336
                     /locus_tag="VK150_04515"
     CDS             1609..>2336
                     /locus_tag="VK150_04515"
                     /inference="COORDINATES: protein motif:HMM:NF024900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HLP30602.1"
                     /translation="MTDSLTLDKPRRAPASQQNQNLPTPGLKGAETEITLTLDGQEVR
                     VPPGTSILEAARKLGTHIPTLCHHPDLCVAGVCRVCSVEVEGMRALQAACTFPVTAPI
                     QVRTHSKKVRLARRHIVDLLLSDHYGECYSCRRNNNCELQSLAREYGVDMFRFGHPET
                     PRHEIDTSSYSVVRDNNKCVMCRRCVRTCIDLQEVGTIEVLGRSDKSHIAPYLNKPLG
                     SVVCINCGQCINRCPTGALHAQDYT"
BASE COUNT          421 a          829 c          710 g          376 t
ORIGIN      
        1 aaataccaca agatcgacac ctatgccatg caggtgaccg ctgacctcct gggcatccac
       61 ccggtggagg tcaacagcgt cgtctcgttc tacgccttcc ttggcgaccg gccccagggc
      121 cagtacgtca tccgcctctg ccgcaccatt tcctgcgcca tggcggagaa ggaccgggtc
      181 atgcgccagc ttgagaacga tctgggcatc agcttcggcc agaccacctc cgacgggaag
      241 ttcaccctcg aatgggccaa ctgcatcggc atgtgcgacc agggccccgc cctgctggtg
      301 aacgagcgcg tcttcacccg ggtcaccccc gaatccgtgc acgccatcct ggaggaatgc
      361 cgccgggcct tcggccagca cgccactgaa cggaaggagg tccacctcgc atgagccaga
      421 ttccgacctt caatgccatg cctccgaacc tgggcctgca gcgggccttg gccatgacgc
      481 ccaaggagat cgtgaaggag atcgccgact cgggcctgaa aggccgggga ggcgccgggt
      541 tctccacggg catcaagtgg gagcttgccg ccgaagcggt ctccgaccgg aaattcatcc
      601 tttgcaacgc ggatgaaggc gagccgggca ccttcaagga ccgggtcatc ctgcaggaat
      661 acgctgacct ggtcttcgag ggcatgacca tcgccgcgct ggccgtggga gcccaggagg
      721 gcatcctctt ccttcgcggc gagtacacct acctgcgggc ccacctcgaa gccgtgctgc
      781 tggcgcgaag ggagcatcac ctcctgggcg agaacatcct gggcttcggc tcctccttcg
      841 acatccgcat tttcatgggc gccggtgcct acatctgcgg cgaggaaacc ggcctcatcg
      901 aatgcctcga agggttccgg ggcgagccgc gcaaccgccc gccctaccct gtgcaccgcg
      961 gtttcctgga ctgcccgtcc gtggtgaaca acgtggagac cctggcctgg gccgcctgca
     1021 tcctgcagcg aggcgctcca tggttccgga aggtcggcac cgagatgagc acgggcatca
     1081 agatcttcag catttccggc gactgcgaac gaccgggcgt cttcgaattc cccatgggca
     1141 tcacggtgaa ggagctgctc cgccacgtgg gcggcgagga cgcaagggcc gtgcagatcg
     1201 gcggcgcctc gggccagtgc atccctgcct cgcagttcga tcgcgccatc gccttcgaag
     1261 acatccccac cggcggctcc gtgatcgtgt tcggtcccca gcgggacatg ctggacgtca
     1321 tcgagaactt cctcggcttc ttcgccgacg aatcctgcgg ccagtgcacg ccctgccgcc
     1381 tgggcaaccg gaagctgctt gagggcgtga agatgctcaa ggccggcacc tgctccatgg
     1441 cctacctcaa tgagctctgc gccctgggcg agaccatgat gattgcctcc aagtgcggcc
     1501 tcgggcagag cagcccctgc gcattcctct cggtggtgcg gaacttccgg gaagagctca
     1561 tgggccgcgc ccacaccctg acccatgcct gagcgaaggg gaccttccat gaccgactcc
     1621 ctcaccctcg acaagccccg ccgggccccg gccagccagc agaaccagaa cctccccacg
     1681 cccggactga agggcgctga aaccgagatc accctcaccc tggatggcca ggaggtgcgg
     1741 gtaccccccg gcaccagcat cctggaggcc gcgcgaaagc tgggcaccca catccccacc
     1801 ctctgccacc atccggacct ctgcgtggcg ggcgtctgcc gggtctgttc ggtggaagtg
     1861 gagggcatgc gcgccctcca ggcggcctgc accttccccg tgacggcacc catccaggtg
     1921 cgcacccact cgaagaaggt gcgcctggcc cggcgccaca tcgtggatct gctgctgagc
     1981 gatcactacg gcgaatgcta ttcctgccgc cggaacaaca actgcgagct gcagtccctg
     2041 gccagggaat acggcgtgga catgttccgg ttcgggcatc ccgagacgcc gcggcacgaa
     2101 atcgacacct ccagctactc cgtggtgcgg gacaacaaca agtgcgtgat gtgccgccgc
     2161 tgcgtccgca cctgcatcga cctgcaagag gtgggcacca tcgaggtgct gggccgctcc
     2221 gacaagagtc acatcgcgcc ctacctcaac aagcccctgg gctcggtggt ctgcatcaac
     2281 tgcgggcaat gcatcaaccg ctgccccacc ggcgcgctgc acgcccagga ctacac
//
LOCUS       DATGWW010000305         2820 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_335825, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000305 DATGWW010000000
VERSION     DATGWW010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335825"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..884
                     /locus_tag="VK150_04520"
     CDS             <1..884
                     /locus_tag="VK150_04520"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLP30603.1"
                     /translation="VFDTAANYRAGRSERALGRAFAARAAAPRFVSTKAGYLPMGDGI
                     TAEPPRDWFQRVLEGPGILTPDDVVDGCHAMTPRYLSHQLEVSRAALGLDTLDLFHLH
                     NPEQQLPALGPEAFYASLTRAFEACESFVAEGQIRTYGVATWNGFRVPPGKADHLSLE
                     RVVAAAEAAGGKAHHFRWIQLPLNLALPEAFLAPTQVLGGARMTPLQAAQDLGLSVQT
                     SASIMQARILHQLPADLVAALGGATPAQAALQFTRSCPGVTVALCGMGRPEHVAENAP
                     VIRLPKVPADLLAGLFR"
     gene            884..1435
                     /locus_tag="VK150_04525"
     CDS             884..1435
                     /locus_tag="VK150_04525"
                     /inference="COORDINATES: protein motif:HMM:NF014622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HLP30604.1"
                     /translation="MLLAITPGLGFDRARWEPVLRSGVDALLIREKALTARALLDAAR
                     WCQDRAPEVAIWVAGRLDVAFAAGCGLHAPEAHPEVDGGLVPLSRPLHDETQWEGRCG
                     ADQLLISPVFASPGKGAPWGVERLHRFLDHLPAEGPRLLALGGVDPDSAARLRHPRLS
                     GLAAIRPFWSGDPAGAVAKFREC"
     gene            1452..>2820
                     /locus_tag="VK150_04530"
     CDS             1452..>2820
                     /locus_tag="VK150_04530"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HLP30605.1"
                     /translation="MFRDLRAKVSAPRRVAAWILLAMLLGAAAFVLPRMTPHPAAQRA
                     ADVILWSALAYLAIRLVSFLLLDPLLSQRKSATPGFARDLLVVTLYLVAAGGILREVL
                     QVSLGQLLGTGAIAAAVVGLSLQEVLGNLFAGISLHLDPAFQEGDWVEITGNLRGGPG
                     RETLIGQVGAMTWRTVQLRTENGDTDILPNRVIAQAVVTNLYVPSGFHRRTARIIVEP
                     RPDLHVAVDKLTLALAGLPHPAHHRPEVVVHSSDLGGAVLEMRFWALGFRHGRQGTFQ
                     ATRLAATVLPREGFRLMGPHGPTPLVASPDSAPDAPLVAEVVRQLGLPDRWAEELRPH
                     LRRRLLAPGEGVIREGDPGDSLFAVHRGELQVVHPEAREEPYTGLFWKPLAQLGPGQW
                     FGEASLLTGAPRSATVVALTEAEVLELPKAAFEASLQREPELLEQLVDLMDRRGHEAV
                     AAPVPT"
BASE COUNT          335 a         1080 c          989 g          416 t
ORIGIN      
        1 ctgtcttcga caccgcggcc aactaccggg cgggccggtc ggaacgggcc ctgggccggg
       61 ccttcgccgc ccgggccgcc gcgccccgct tcgtctccac gaaggcgggc tacctgccca
      121 tgggggacgg aatcaccgcc gagccccccc gggactggtt ccagcgcgtc ctggaggggc
      181 cgggcatcct gacgcccgac gacgtggtgg atggctgcca cgccatgacg ccccgctacc
      241 tctcccacca gctggaggtc agccgggcgg cgctgggcct cgacaccctc gacctcttcc
      301 acctgcacaa cccggaacag cagctgcccg ccctcggccc cgaggccttc tacgcgtccc
      361 tcacccgggc cttcgaggcc tgcgagagct tcgtcgcgga gggccagatc cggacctacg
      421 gcgtggccac ctggaacggc ttccgggtgc ctccgggcaa ggccgaccac ctcagcctcg
      481 aacgggtggt ggccgccgcc gaggccgccg gcggcaaggc gcaccatttc cggtggatcc
      541 aactgcccct caacctggcg ctccccgagg ccttcctcgc ccccacgcag gtcctgggcg
      601 gcgcgcgcat gaccccgctg caggcggccc aggacctggg gctgtctgtg cagacctccg
      661 cctcgatcat gcaggcccgc atcctccacc agctgccggc ggacttggtg gcggcgctgg
      721 gcggcgccac gccggcccag gccgccctcc agttcacccg gtcctgcccc ggcgtcacgg
      781 tggcgctctg cggcatgggc cgccccgagc acgtggccga gaacgcgccc gtgatacgcc
      841 tcccgaaggt gccggccgat ctcctcgccg gtctcttccg atgatgctgc tcgccatcac
      901 gccggggctc ggcttcgacc gtgcccggtg ggagccggtg ctgcgctccg gcgtggacgc
      961 cttgctcatc cgcgagaagg cgctgaccgc cagggcgctg ctggacgcgg cccgctggtg
     1021 ccaggacagg gcccccgagg tggcgatctg ggtggcgggc cggctcgacg tggccttcgc
     1081 cgcgggctgc gggctgcacg ccccggaggc ccatcccgag gtggacggcg ggttggtgcc
     1141 gctctcccgc cctctgcacg acgagaccca gtgggagggg cgatgcggcg ccgaccagct
     1201 gctgatctcc cccgtattcg cgagtcccgg caagggcgcg ccctggggtg tcgagcgact
     1261 gcaccgcttc ctggatcatc ttccggccga gggcccgcgc ctcttggcgc tgggcggcgt
     1321 cgacccagac agcgccgccc ggctgcggca tccgcggctg tcgggcctcg cggccatccg
     1381 ccccttctgg tccggcgatc cagcgggggc cgtggcgaaa ttccgcgagt gttaagcgta
     1441 tccttctgtc catgttccga gacctgaggg cgaaagtcag cgcgccgcgc cgcgtggcgg
     1501 cctggatcct gctcgccatg ctgctgggcg ccgcggcctt cgtgctgccc cgcatgacgc
     1561 cccaccccgc ggcgcagcgc gcggccgatg tgatcctctg gtccgccctg gcctacctcg
     1621 ccatccggct ggtctcgttt ctccttctcg atcccctgct gagccagcgg aagtccgcca
     1681 cgccgggctt cgcgcgggac ctcctggtgg tgacgctcta cctggtggcc gccggcggca
     1741 tcctgcgcga ggtcctgcag gtgagcctgg ggcagctgct cggcaccggc gccatcgccg
     1801 cggccgtggt gggcctcagc ctccaggagg tgctgggcaa cctttttgcg ggtatctccc
     1861 tgcacctgga tccggccttc caggaggggg actgggtgga gatcacgggc aacctccgcg
     1921 gcggacccgg gcgggagacg ctcatcgggc aggtgggggc catgacctgg cgaacggtgc
     1981 agctgcgcac cgagaacggg gacacggaca tcctccccaa ccgcgtcatc gcccaggccg
     2041 tggtgaccaa cctctacgtg ccctcgggct tccaccggcg caccgccagg atcatcgtcg
     2101 agccccggcc cgacctgcac gtggcggtgg acaagctcac cctcgccctg gcgggcctgc
     2161 cccatccggc ccaccaccgg cccgaggtgg tggtgcacag ctccgacctt ggcggcgcgg
     2221 tgctggagat gcggttctgg gccctgggct tccggcatgg ccgccagggc acgttccagg
     2281 ccacccggct cgcggccacg gtcctgcccc gtgaagggtt ccgcctcatg ggtccgcacg
     2341 ggcccacgcc actggtggcc agccccgaca gtgcgcctga cgcgcccctc gtggcggagg
     2401 tcgtccggca gctggggctg ccggaccgct gggccgagga gctgcgcccc cacctgcggc
     2461 ggcgcctgct ggccccgggc gaaggcgtga tccgcgaggg cgatccgggc gattccctgt
     2521 tcgcggtcca ccgcggcgag ctgcaggtgg tgcatcccga ggcgcgggag gaaccctaca
     2581 ccggcctctt ctggaaaccg ctggcgcagt tggggccggg ccagtggttc ggcgaggcca
     2641 gcctcctcac tggcgccccc cgcagcgcca ccgtggtggc cctgactgag gctgaggtgc
     2701 tcgaactgcc caaggccgcc ttcgaggcct ccctccagcg ggaaccggag cttctggaac
     2761 agctggtgga cctgatggac cggcggggtc acgaagccgt cgcggcgccc gtcccgacgg
//
LOCUS       DATGWW010000306         2471 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_69500, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000306 DATGWW010000000
VERSION     DATGWW010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2471
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69500"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VK150_04535"
     CDS             <1..248
                     /locus_tag="VK150_04535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30606.1"
                     /translation="WYDETQAARPELSLEATLLFQEAGEGTRVRILAAGRWNIVSQGK
                     HQISLLTGTQPDQEAAACRRFLDLLEARLCPAPAQRP"
     gene            313..846
                     /locus_tag="VK150_04540"
     CDS             313..846
                     /locus_tag="VK150_04540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30607.1"
                     /translation="MKRATFAGSAMCVALAILPLAAQGSPESRVDSASFGLGYGSQGV
                     LFTTMRTGPQLGYFLGLSALPGTSRSGGMEPGSGSPRWIQHEDGRSGAHLGVAYRLDT
                     RWVVGLGLGYASTMYRYSYNPGSGFFPATAPPEPGPLTDNRFGAVAMVDLRLGPRWGV
                     EAVGGVTGLGASVTFRF"
     gene            complement(868..1986)
                     /locus_tag="VK150_04545"
     CDS             complement(868..1986)
                     /locus_tag="VK150_04545"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HLP30608.1"
                     /translation="MLRWIAPLAFAGLIGCGHSRGTTSPPPPPPPAGGTFAITPVVTG
                     LVQPTAMALVPDGRVLICEQTGGLRVVKDGALLPVPMLSVTVDAAGERGLIGVTVDPA
                     FAANGFVYVHYTSPTPAPHNRVSRFTVAGDAAVAGSEVILLDLDNLSSATNHNGGALH
                     FGPDGKLYVGVGENANGANAQSLANLLGKVLRLNPDGSVPVDNPLLAQTTGKNRLIWA
                     LGLRNPFTFAFQPGTGRLLINDVGQSTWEEINTGRAGANYGWPATEGATTNPAYDGPL
                     YAYPHSGGAVTGCSIVGAAFYDPATPTFPAAYHHRYFFLDYCGGWLRTLDPATGAVAD
                     WLTGFSSPVDLRVADDGSVLVLSRGGGGTLRRVTYTAP"
     gene            complement(2070..>2471)
                     /locus_tag="VK150_04550"
     CDS             complement(2070..>2471)
                     /locus_tag="VK150_04550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30609.1"
                     /translation="HLRVKASYLPQNWEPLEAAGLLDTVEGTTEILPGISVRPAPGHI
                     EGLQNVVIEGGGRRLVYLADLIPTARHIQPAWVMGYDLDVVTCVDERQKLLAEVTGTG
                     TVCVFEHDPDIPAGTVSRDAKGKYLVEPVAL"
BASE COUNT          337 a          801 c          945 g          388 t
ORIGIN      
        1 cctggtacga cgagacgcag gccgcgcggc cagagctgtc gctggaggcg acgctgctct
       61 tccaggaggc gggcgaggga acccgggtgc ggatcctggc cgcagggcgc tggaacatcg
      121 tgagccaggg taaacaccag atcagcctgc tgaccggaac ccaaccggat caggaagcgg
      181 ccgcgtgccg ccgcttcctg gacctgttgg aagcccggct gtgtcccgcg ccggcccaga
      241 gaccctgagg cctgactgcg ctctcgagcc atgtgatcga gccatgtgaa ttccatcccc
      301 aaggaggtcc ccatgaaacg cgccaccttt gccggttctg cgatgtgcgt cgcgctggcc
      361 atccttcccc tcgccgccca gggcagtccg gaatcccggg tggattccgc ctccttcggc
      421 ctcggctacg gctcccaggg cgtcctgttc accacgatgc ggacgggtcc tcagttgggg
      481 tacttcctgg gcttgtcggc gctccccggc acgtcccgtt caggcgggat ggaaccgggc
      541 agcggaagcc cgcgctggat ccagcacgag gatggccgca gcggcgccca cctgggcgtg
      601 gcgtaccggc tggatacccg gtgggtggtg ggtctcggcc ttggctacgc ctccaccatg
      661 taccgctaca gctacaaccc ggggtcgggt ttcttccccg ccaccgcgcc gcctgaacct
      721 gggcctttga cggataaccg gttcggcgcg gtggccatgg tggacctgcg gctggggccc
      781 aggtgggggg tggaggcggt gggcggcgtc accggcctgg gggcctcggt gacgttcagg
      841 ttctagccca cgccggccgg acaggcttca gggggccgtg taggttactc gcctcagggt
      901 gccgccgccg ccacgggaga gcacgaggac ggacccgtcg tcggccaccc gaaggtccac
      961 ggggctggag aacccggtga gccagtccgc cacggcccct gtggcggggt cgagggtgcg
     1021 cagccagccg ccgcagtaat cgaggaagaa gtagcggtgg tggtaggcgg ccgggaaggt
     1081 gggcgtggcg gggtcataga aggcggcgcc cacgatggag cagccggtga ccgcgccgcc
     1141 gctgtgggga taggcgtaga gcgggccatc gtaggcggga ttggtggtgg cgccttccgt
     1201 ggcgggccag ccgtagttgg cgccggcgcg gccggtgttg atctcctccc aggtgctctg
     1261 gcccacgtcg ttgatcagca ggcgccccgt cccgggctga aaggcgaagg tgaaggggtt
     1321 ccggaggccc agggcccaga tcaggcggtt ctttcccgtg gtctgcgcca gcaggggatt
     1381 gtcgacgggc acgctgccat cggggttgag gcggagcacc ttgcccagga ggttggcgag
     1441 gctctgcgcg ttggcgccgt tggcgttctc gcccacgccc acgtagagct tgccgtcggg
     1501 cccgaagtgc agcgcgcccc cgttgtggtt ggtggccgag ctgaggttgt ccaggtccag
     1561 caggatcact tcgctgcccg ccacggccgc gtcgccggcc acggtgaagc ggctgacgcg
     1621 gttgtggggg gccggcgtgg ggctggtgta gtggacatat acgaagccgt tggcggcgaa
     1681 ggcgggatcc acggtcacgc cgatgaggcc ccgctcgccg gcggcatcca cggtgacgct
     1741 gagcatcggc accggcagga gcgcgccgtc cttcaccacc cgcaacccac ccgtctgctc
     1801 gcagatcagg acgcggccgt cgggcaccag tgccatggcc gtgggctgga cgaggcccgt
     1861 gaccaccggg gtgatggcga aggtcccgcc tgcgggaggc ggcggtggcg gcggggaggt
     1921 ggtgccgcgg ctgtgaccgc agccgatgag accggcgaag gcgagcggag cgatccagcg
     1981 cagcatggga cctccggggg cgggcccttc agggggtgga tccttggatg ctcccggccc
     2041 ggcattcctt cccggggccc cggtgctcgt cagagcgcca cgggctccac caggtatttc
     2101 cccttcgcgt cccggctcac ggtgcctgcc gggatgtcgg ggtcgtgctc gaagacgcag
     2161 acggtgccgg tgccggtgac ctcggccagc agcttctggc gctcgtcgac gcaggtgacc
     2221 acgtccaggt cgtagcccat gacccaggcg ggctggatgt ggcgggcggt ggggatgagg
     2281 tcggcgaggt agaccaggcg ccggccgccg ccctcgatga cgacgttctg caggccctcg
     2341 atgtggcctg gggcggggcg cacggaaatg cccgggagta tctcggtggt gccttccacc
     2401 gtgtcgagca ggcccgcggc ttccaggggc tcccagttct ggggcaggta gctcgccttc
     2461 acgcgcaggt g
//
LOCUS       DATGWW010000307         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_335876, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000307 DATGWW010000000
VERSION     DATGWW010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335876"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            37..>1740
                     /gene="ftsH"
                     /locus_tag="VK150_04555"
     CDS             37..>1740
                     /gene="ftsH"
                     /locus_tag="VK150_04555"
                     /inference="COORDINATES: protein motif:HMM:TIGR01241.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HLP30610.1"
                     /translation="MRTLQDFLAMAQDWLPVKDDDPKEGGRKAAAPGEPRKGGRLGAT
                     GSRPGKSRFPAGYFLFLGGLLLLFNLLIPRPTLGLLDYSEFKHKIRSGEILRVEIQPG
                     MILGRATAAPDTSRASRASRAADTGKVYRAVPVEDPGLLALLDSAGVEYTARVDAAAG
                     VKTFFFNWVLPALFFIGLWMLLMPRLGGGGGGAGLFALGKSKAHVVAEGEVGITFDDV
                     AGVDEAKDELKEIVDFLRTPAKYLAIGGKIPKGVLLVGPPGTGKTLMAKAVAGEAKVP
                     FFRISGSDFVEMIVGVGAARVRDLFKQAREKAPCIIFIDELDAIGKSRTSMMGGHDER
                     EQTLNQLLVEMDGFDTRAGVIILAATNRPEILDPALLRPGRFDRQVVVDKPDLAGRKA
                     ILERHAQGVKMAPEVDLEALARRTPGFAGADLANIINEGALQAVKADHTQVTQADLEE
                     AVERVMAGLRKKNRVMTPRDKERVAHHETGHALVAAFTPGVDPVDKVSIIPRGLGALG
                     YTLQLPTEERYLLTEGELLARIDVLLGGRAAEEIIYGEVSTGAAHDLGRATEIARQMV
                     MD"
BASE COUNT          301 a          606 c          586 g          247 t
ORIGIN      
        1 ggagactccg gggatctccg gagacggact cagaaaatgc gaaccctcca ggatttcctc
       61 gccatggccc aggactggct ccctgtcaag gacgacgacc ccaaggaagg cggccggaag
      121 gccgccgcgc ccggcgagcc ccgcaaggga ggaagactcg gagccacggg atcccgcccg
      181 ggcaagtcgc gcttccccgc ggggtatttc ctcttcctgg gaggtctgct cctcctcttc
      241 aaccttctca tcccgcggcc caccctgggc ctgctcgact atagcgaatt caagcacaag
      301 atccgctccg gggagatact gcgggtggaa atccagccgg gcatgatcct gggacgcgcc
      361 accgccgctc cggacacgtc cagggcgtcc agggcgtccc gcgcggcgga cacgggaaaa
      421 gtgtaccgcg ccgtgcccgt ggaggatccc ggcctcctcg ccctgctgga ctcggcgggc
      481 gtggaatata cggccagggt ggacgccgcg gcgggggtca agaccttctt cttcaactgg
      541 gtgctgcccg ccctcttctt catcggcctg tggatgcttc tcatgcctcg cctgggtggc
      601 ggagggggcg gcgccggact cttcgccctc ggcaagagca aggcccacgt cgtggccgag
      661 ggcgaggtcg gaatcacctt cgacgacgtg gcgggggtgg acgaggccaa ggacgagctc
      721 aaggaaatcg tcgacttcct ccgcaccccg gccaagtacc tcgccatcgg cggaaagatt
      781 cccaaagggg tgctcctcgt gggcccgccg ggcacgggca agaccctcat ggccaaggcc
      841 gtggccggag aggccaaggt ccccttcttc cgcatcagcg gatcggactt cgtggagatg
      901 atcgtgggcg tgggggccgc gcgcgtgcgc gatctgttca agcaggcccg cgagaaggcg
      961 ccctgcatca tcttcatcga cgagctggac gccatcggca agtcccgcac cagcatgatg
     1021 ggaggccacg acgagcgcga gcagaccctg aaccagcttc tcgtggagat ggacgggttc
     1081 gacacccgtg ccggagtcat catcctcgcg gccaccaacc gccccgagat cctggacccg
     1141 gccctcctgc gccccggccg cttcgaccgc caggtggtgg tggacaaacc cgacctcgcc
     1201 ggccgcaagg ccatcctgga gcgccatgcc cagggcgtca agatggcccc cgaggtggac
     1261 ctcgaagccc tggcgcgccg cacgccggga ttcgccgggg cggacctggc caacatcatc
     1321 aacgaggggg ccctgcaggc cgtgaaggct gatcataccc aggtgaccca ggccgacctc
     1381 gaggaagctg tcgagagggt gatggcgggg ctccgcaaga agaaccgcgt gatgaccccg
     1441 cgcgacaagg aacgcgtggc ccaccacgag accggccacg ccctggtggc ggccttcacc
     1501 cccggggtcg atcccgtgga caaggtctcc atcatccccc gcgggctggg ggcgctcggc
     1561 tacaccctgc agctccccac cgaggagcgc tacctgctga ccgagggcga gctcctcgcg
     1621 cgcatcgacg tgcttctcgg tgggcgcgcg gcggaggaga tcatctacgg cgaagtctcc
     1681 accggggcgg cccacgacct gggccgggcc accgaaatag cgcgacagat ggtcatggac
//
LOCUS       DATGWW010000308         2006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_431375, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000308 DATGWW010000000
VERSION     DATGWW010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431375"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1476
                     /gene="lepA"
                     /locus_tag="VK150_04560"
     CDS             <1..1476
                     /gene="lepA"
                     /locus_tag="VK150_04560"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HLP30611.1"
                     /translation="TLANTYLALENGLEVFPVLNKTDLPSADPERVLHQIDTVIGLVD
                     TAHAVNVSAKTGHNCDQVLEQIVKCIPAPVGDPHAPLQALVFDCYYDAYRGVVNLIRV
                     VNGTLKAGDQIRFMSTGSEHRVDEIGIFDPKMDKQDSLSVGEVGYLVANIRQLADVKV
                     GDTVTHAVTLTTKPATEMLKGFKEIQPVVFAGIFPTSSDDFENLRNAMDKLRLNDSSF
                     TYEPETSTALGFGFRCGFLGLLHMEIVQERLEREFDLDLITTAPSVRYHVFLTDGSET
                     SVDNPSKLPPLQKIAKIDEPIIEATILTRTDFVGGLIKLCEERRGIQQKLEYVSQDRV
                     MLVYELPLNEVVLDFYDKLKSISKGYASFDYHMKHYLESDLVKMDILVNGDAVDALSI
                     LVHRSKSQSLGLALCQKMKEVIHQQLFDVAIQAAIGSKIIARTNVKARRKDVLAKCYG
                     GDISRKKKLLNKQKEGKKRMKSIGNVEIPQEAFLAILKVDS"
     gene            complement(1587..>2006)
                     /locus_tag="VK150_04565"
     CDS             complement(1587..>2006)
                     /locus_tag="VK150_04565"
                     /inference="COORDINATES: protein motif:HMM:NF020397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HLP30612.1"
                     /translation="GSAMTPPKPATPRSANATAEVDAFMAALDHPHKAVVELLRRVIR
                     EADPAIGEGIKWNAPSFRTREYFATTHLRMKEGIGLILHLGAKAREASGLAVQDPEGL
                     LRWLGKDRAMVVFRSAEDLLARRIPLEHLIRQWIAFL"
BASE COUNT          398 a          655 c          629 g          324 t
ORIGIN      
        1 accctggcga acacctacct ggccctggag aacggcctgg aggtcttccc ggtgctgaac
       61 aagaccgatc tgcccagcgc cgatcccgag cgggtgctgc accagatcga caccgtcatc
      121 ggcctggtgg acacggccca cgccgtgaac gtgagcgcca agactggcca caactgcgac
      181 caggtgctcg agcagatcgt gaagtgcatc ccggcgcccg tgggcgatcc ccacgcgccc
      241 ctccaggccc tggtcttcga ctgctactac gacgcgtacc gcggcgtggt gaacctcatc
      301 cgcgtggtga acggcaccct gaaggccggc gaccagatcc gcttcatgtc gaccggcagc
      361 gagcaccggg tggatgagat cggtatcttc gatcccaaga tggacaagca ggattcgctc
      421 tccgtgggcg aggtgggcta cctcgtggcg aacatccggc agctggccga cgtgaaggtc
      481 ggtgacacgg tgacccacgc ggtgacgctc accaccaaac ccgccacgga gatgctgaag
      541 ggcttcaagg agatccagcc cgtggtcttc gcgggcatct tccccacctc cagcgacgac
      601 ttcgagaacc tgcgcaacgc catggacaag ctgcgcctca acgacagcag cttcacctac
      661 gagcccgaga catccacggc gctcggattt ggcttccgct gcggcttcct cggcctgctg
      721 cacatggaga tcgtgcagga gcgcctggag cgcgagttcg acctggacct catcaccacg
      781 gcgcccagcg tgcggtacca cgtgttcctc accgacggct ccgagacctc ggtggacaat
      841 ccctcgaagc tgccgcccct gcagaagatc gcgaagatcg acgaacccat catcgaggcg
      901 acgatcctca cccgcacgga tttcgtgggc ggcctcatca agctctgcga ggagcgccgc
      961 ggcatccagc agaagctgga atacgtgagc caggaccgcg tgatgctggt ctacgaactg
     1021 cccctcaacg aggtggtgct cgacttctac gacaagctga agtccatctc caagggctac
     1081 gccagcttcg actaccacat gaagcactac ctcgaatccg acctggtgaa gatggacatc
     1141 ctggtgaacg gcgacgcggt ggacgcgctg tccatccttg tgcatcgcag caagagccaa
     1201 agcctgggcc tcgccctctg ccagaagatg aaggaagtga tccatcagca gctgttcgac
     1261 gtggccatcc aggccgccat cggcagcaag atcatcgccc gcaccaacgt gaaggcccgc
     1321 cgcaaggacg tgctcgccaa gtgctacggc ggcgacatca gccggaagaa gaagctgctc
     1381 aacaagcaga aagaaggcaa gaagcggatg aagtccatcg gcaacgtgga gatcccgcag
     1441 gaagccttct tggcgatcct gaaagtggac agctaggatt tctccgtttc aggtggcgtc
     1501 catcagcaac gtggagatcc cgcaggccga ggctcagccg ggaacccggc gatcctgaac
     1561 ctggacagcc aggggctgtt cgatgctcag aggaaggcga tccactggcg gatcaggtgt
     1621 tccaggggta tccggcgcgc gaggagatcc tccgcgctgc ggaaaaccac catggcccga
     1681 tcctttccca gccatcgcag caggccttcg gggtcctgga cggccaggcc ggaggcctcc
     1741 cgcgccttgg cgccgagatg gaggatgagg ccgatgccct ccttcatccg caggtgggtg
     1801 gtggcgaagt attcccgggt gcggaagctc ggcgcgttcc acttgatgcc ttcgccgatg
     1861 gccgggtctg cctcccggat cacccggcga aggagctcga cgaccgcctt gtggggatgg
     1921 tcgagggccg ccatgaatgc gtccacctca gcggtggcgt tggcgctcct cggagttgcg
     1981 ggtttcggag gcgtcatggc ggaccc
//
LOCUS       DATGWW010000309         2049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_108080, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000309 DATGWW010000000
VERSION     DATGWW010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108080"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(129..1280)
                     /locus_tag="VK150_04570"
     CDS             complement(129..1280)
                     /locus_tag="VK150_04570"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA desaturase"
                     /protein_id="HLP30613.1"
                     /translation="MAEAKRWNLLNTLFLTGTLALAVVLVPLRVITSGIGWGEALVFL
                     AMTFAIGTAISGGYHRLFSHRAYKASWPVRFVFLCLGAAAFENSALKWSSDHRVHHQH
                     VDTDQDPYAIQQGFWYAHWTWVMEQKALPIHGVADLEKDPLVRWQHRHHFLIGAVVST
                     IPLWIGLSTGNLLGHLVFGVVLRIVVTHHTTFFINSAAHMFGSRPYTDANTARDNWLL
                     APLTYGEGYHNFHHLWQWDYRNGALWYQWDTTKWLLNVLAWLGLVGQFRRVSDAAMTR
                     ARLHMEEKRLRERLMLASPGIATPMHARLAAARQRLDHALAALHDRHEAWILKKAEWR
                     AKGMARAEAWREAKAEWEGAMAHHRADLKTAWREWKAARLEVRSALVYA"
     gene            1370..>2049
                     /locus_tag="VK150_04575"
     CDS             1370..>2049
                     /locus_tag="VK150_04575"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HLP30614.1"
                     /translation="MTETRPWYRSSTFWIFMGLLLGVALGGFLPQDQYPWAYNAFRFL
                     SKAFISLIKGLIVPLLLSTIIVGIAQTGDIRAVGRMGAKALLYFEVVTTLALFIGLAV
                     ANWLKPGANLPMDLGAHAAVAVTKAKSGWDIALHMFPSNLIQHAAEGDILPVVIFATI
                     FGIALTKVGERGKPVLAFFDGVAQTMFKYTDFVMRLTPLGVFGAMAYNVSHMAAGHTV
                     NGALIKGWP"
BASE COUNT          318 a          681 c          717 g          333 t
ORIGIN      
        1 caggccagca gcacccacag gtggacatcc agggccggcg cggcgagaaa ccgcgggagg
       61 atgcgcatgg gttgcctcca ggcggagtgg gtcaggctgg tttcagaggc ccggctgggc
      121 gccctgcctc aggcgtacac gagcgcggag cggacctcca ggcgcgcggc cttccactcg
      181 cgccaagcgg tcttgaggtc ggcgcggtga tgggccatgg cgccttccca ctcggccttg
      241 gcctcccgcc aggcctcggc cctggccatc cccttggcgc gccactcggc cttcttcagg
      301 atccaggcct cgtgccggtc gtgcagggcg gccagggcgt ggtcgaggcg ctgccgggcc
      361 gccgcgagcc gggcgtgcat gggcgtggcg atgcccgggc tggccagcat gagccgctcg
      421 cgaagccgct tctcctccat gtggagccgg gcccgggtca tggcggcgtc ggacacgcgc
      481 cggaactggc ccaccaggcc cagccaggcc aggacgttca gcagccactt ggtggtgtcc
      541 cactggtacc agagggcgcc gttgcggtag tcccactgcc agaggtggtg gaagttgtgg
      601 tagccctcgc cgtacgtgag gggcgccagc agccagttgt cccgggcggt gttggcgtcg
      661 gtgtagggcc ggctgccgaa catgtgggcg gcgctgttga tgaagaaggt cgtgtggtgg
      721 gtcaccacga tgcggagcac cacgccgaag accaggtggc caagcaggtt gcccgtggac
      781 aggccgatcc acagcgggat cgtcgagacg acggcgccga tgaggaagtg gtggcggtgc
      841 tgccagcgca ccagcggatc cttctccagg tccgccacgc cgtggatggg cagggccttc
      901 tgctccatca cccaggtcca gtgggcgtac cagaacccct gctggatggc gtagggatcc
      961 tggtcggtgt ccacgtgctg gtggtggaca cggtggtcgc tggaccactt cagggcggaa
     1021 ttctcgaagg ctgcggcccc caggcagagg aagacgaagc gcacgggcca ggaggccttg
     1081 taggcccggt ggctgaagag ccggtgatag ccgccgctga tggcggtgcc gatggcgaag
     1141 gtcatggcga ggaacaccag cgcctcgccc cagccgatgc ccgaggtgat gacccggagg
     1201 ggcacgagca ccaccgccag ggccagggtc ccggtgagga agagggtgtt cagaaggttc
     1261 cagcgtttgg cctcggccat gccattgact ccaaaagaga gttcaattct acccccggtc
     1321 agtccaggga cacccatgcc aaacttgccg gatcccctgt gaggtttctg tgaccgagac
     1381 gcgcccctgg taccgctcca gcaccttctg gatcttcatg ggcctgctcc tcggcgtggc
     1441 gctgggcggc ttcctgcccc aggaccagta cccctgggcc tacaacgcct tccggttcct
     1501 ctccaaggcc ttcatcagcc tcatcaaggg cctcatcgtg cccctgctgc tctcgaccat
     1561 catcgtgggc atcgcgcaga ccggcgacat ccgcgccgtg ggccgcatgg gcgccaaggc
     1621 cctgctgtac ttcgaggtgg tcaccaccct ggccctcttc atcggcctgg cggtggccaa
     1681 ctggctgaag ccgggggcga atctccccat ggacctgggc gcccacgcgg ccgtggccgt
     1741 cacgaaggcg aagagcggct gggacatcgc cctgcacatg ttcccgtcca acctcatcca
     1801 gcacgcggcg gagggcgaca tcctgcccgt ggtcatcttc gcgacgatct tcggcatcgc
     1861 cctcaccaag gtgggcgagc ggggcaagcc ggtgctcgcc ttcttcgacg gcgtggcgca
     1921 gaccatgttc aagtacaccg acttcgtgat gcggttgacc ccgctcggcg tcttcggcgc
     1981 catggcctac aacgtgagcc acatggccgc gggtcacacg gtgaacggcg cgctgatcaa
     2041 ggggtggcc
//
LOCUS       DATGWW010000310         1667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_147296, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000310 DATGWW010000000
VERSION     DATGWW010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147296"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1667)
                     /locus_tag="VK150_04580"
     CDS             complement(<1..>1667)
                     /locus_tag="VK150_04580"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP30615.1"
                     /translation="VLFRWAARLAPLPEWWFNRYDPVGLGSITTHWTPGIEAFGTPEE
                     IRRPVYIQESPMLLGMHLHQRAVLIPRCEGHPDLPGQDQWAFRTFVGLPLIHEGAVVG
                     TLSGGSLGDQGHVHVSEDQFKALESLAEAAGLVFNRLHTRRALEEEEARFRLLFEQAP
                     DPIVLISDEVLLDANAAAADLFGMDRAAMFGLPIPTLSPERQPDGELSVLGYAEHLKA
                     ALSGQPERFEWTFLCAQGREAVCQVNLTRLDHGDQPLVHMIVRDLTAQKRAEAERATL
                     ERQLFQAQKMESLGVLAGGIAHDFNNLLMGVLGHAGLALEQLNPLHPARRNLESIQKA
                     GQRAADLTRQMLAYSGRGQFVIRNLDLTIQVQEMVHLLEVSIPKNVVLHLDLHRELPS
                     VSVDASQVQQVIMNLVINAAEAIGEASGAITLATGAQRLDEGAMGKMLVGQDAAPGTY
                     VYLEVTDTGCGMDEDTLGRIFEPFFTTKFTGRGLGLSAIMGIVRGHKGALRVYSEVGR
                     GTTFKVLFPADGHRQEAAAEEGEGGPWSGTGMILVVDDDETVRAVAR"
BASE COUNT          260 a          571 c          568 g          268 t
ORIGIN      
        1 cctggccacg gcccgcacgg tctcgtcgtc atcgacgacc aggatcatgc ccgtgccgga
       61 ccagggcccg ccctcgcctt cctcggcggc cgcctcctgc cggtggccgt cggcggggaa
      121 cagcaccttg aacgtcgttc cccggcccac ctcggaatac acccggagag cgcccttgtg
      181 gcccctcacg atgcccatga tcgccgacag gccgaggccc cgccccgtga acttggtcgt
      241 gaagaagggc tcgaagatgc ggccgagggt gtcctcgtcc atcccgcagc cggtatctgt
      301 gacctcgagg tagacgtagg tgccgggagc cgcatcctgg cccacgagca tcttccccat
      361 ggcgccttcg tccagccgct gggcgcccgt ggccagggtg atggcaccgg aggcctctcc
      421 aatggcctcg gcggcattga tcaccaggtt catgatcacc tgctggacct gggaggcgtc
      481 caccgacacc gaaggcagct cccggtgcag gtccaggtgg agcacgacgt ttttcgggat
      541 gctcacctcg aggagatgca ccatctcctg cacctggatg gtgaggtcca ggttgcggat
      601 gacgaactgc ccccggcccg agtaggcgag catctgccgc gtgaggtccg cggcgcgctg
      661 gccggccttc tggatggatt ccaggttgcg ccgggccggg tgaagcggat tgagctgctc
      721 cagggccagc cccgcgtgac ccagcacccc catgagcagg ttgttgaaat cgtgggcgat
      781 gccgccggcc agcacgccaa ggctttccat cttctgggcc tggaacaact ggcgctccaa
      841 ggtggcgcgt tcagcctcgg cccgcttctg ggccgtgagg tcccgcacga tcatgtgcac
      901 caggggctgg tctccgtggt cgaggcgtgt gaggttcacc tggcaaacgg cctcccggcc
      961 ctgggcgcag aggaaggtcc attcgaaccg ttccggctgg ccggacagcg cggccttcaa
     1021 gtgttcggca tagccgagga cgctcagttc cccgtcgggc tggcgctcgg ggctgagggt
     1081 cggaatgggc aggccgaaca tggcggcccg gtccatgccg aaaaggtccg ccgcagcggc
     1141 gttggcgtcc agcaggacct catccgagat gagcacgatg ggatcgggcg cctgctcgaa
     1201 cagcagccgg aaccgggcct cctcctcttc cagcgcccgc cgcgtgtgca agcggttgaa
     1261 caccagcccg gcggcttccg ccaggctctc cagggccttg aactggtcct ccgatacgtg
     1321 gacatggccc tggtcgccga gggagccccc gctcagtgtg ccgaccacgg cgccttcgtg
     1381 gatcaggggc agacccacga acgtccggaa ggcccactgg tcctgcccag gcaggtccgg
     1441 atgcccctcg cagcggggaa tgaggaccgc ccgctggtgc aggtgcatcc ccaggagcat
     1501 ggggctctcc tggatgtaga cggggcgccg gatctcctct ggcgtaccga aggcttcgat
     1561 gccgggcgtc cagtgggtcg tgatggagcc cagtcccacg ggatcgtagc ggttgaacca
     1621 ccattcaggc aggggcgcca ggcgggccgc ccagcgaaac agcaccg
//
LOCUS       DATGWW010000311         2369 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_431518, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000311 DATGWW010000000
VERSION     DATGWW010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431518"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1830
                     /gene="ppdK"
                     /locus_tag="VK150_04585"
     CDS             <1..1830
                     /gene="ppdK"
                     /locus_tag="VK150_04585"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050242 - pyruvate, phosphate dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HLP30616.1"
                     /translation="AQADGTGLKSLEEAMPESFAELDATCQRLERHFKDMQDIEFTIE
                     RGKLYLLQTRNGKRTAMAGIRIAIDLVDEGLIDSDTALKRIDADSLSQLLAPVFDPKE
                     KERLRKEGQLLTKGLNAGPGAATGRIALTAEAAEQMAQEGPVVLVRVETSPEDIAGMV
                     ASQGILTARGGMTSHAAVVARGMGKPCVCGASAVQIDQARGVVRVGDRELKAGQDWIS
                     MDGSTGEVFIGKLSAHPSEVNQVLVDNRLKAEDSELYQRFAKIMAWSHKAKRMKVRTN
                     ADTPHDAAVARAFGAEGIGLCRTEHMFFEGDRILPVREMILATDSDGRRKALAKLLPI
                     QREDFEGIFTAMDGLPVNIRLLDPPLHEFLPQDEPGQREMAEVLGVDLGTVERRVAQL
                     HEFNPMMGHRGCRLGITFPEIIRMQVRAITEAALNVAAKGVKAIPEIMVPLIGTVREL
                     SYTKAEMLDEIAQVNKERGTQFACPIGTMIEIPRAAITSDKIAQEAEFFSFGTNDLTQ
                     MGFGFSRDDAGSFLPEYVGKKILDDDPFQSLDQEGIGELVRISCEKGRSARPGIKLGV
                     CGEHGGDPRSVNFFHRVGLDYVSCSPYRVPIATLAAAQAALEQ"
     gene            1933..>2369
                     /locus_tag="VK150_04590"
     CDS             1933..>2369
                     /locus_tag="VK150_04590"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLP30617.1"
                     /translation="MAKVQSDQPEIIYSMMRVSKIYNNKPVIKDISLSYFYGAKIGVL
                     GLNGSGKSTVLRIMAGVDQDFNGEAVLSKGYTTGILDQEPQLDPEKTVREIVEEGAAE
                     KVGWLKDYNAISDQFADPDADMDVLLAKQAELQDKIDAHDCWDL"
BASE COUNT          450 a          800 c          781 g          338 t
ORIGIN      
        1 gcccaggcgg acggcaccgg gttgaagagc ctcgaggagg cgatgcctga atccttcgcg
       61 gagctggacg ccacctgcca gcgcctggag cggcacttca aggacatgca ggacatcgag
      121 ttcaccatcg agcgcgggaa gctctacctg ctgcagaccc gcaacggcaa gcgcaccgcc
      181 atggccggca tccgcatcgc catcgatctg gtggacgagg gcctgatcga cagcgatacc
      241 gccctcaagc gcattgacgc cgacagcctg tcgcagctgc tcgctccggt cttcgatccg
      301 aaggagaagg agcgtctccg gaaggagggc cagctgctca ccaagggcct caacgccggc
      361 cccggcgcgg ccaccggccg catcgccctc acggcggaag ccgccgagca gatggcccag
      421 gaaggccccg tcgtgttggt gcgcgtggag accagccccg aggacatcgc gggcatggtg
      481 gcttcccagg gcatcctcac ggcccgcggc ggcatgacca gccatgcggc cgtggtggcc
      541 cgcggcatgg gcaagccctg tgtctgcggc gcctcggcgg tgcagatcga ccaggcccgc
      601 ggcgtggtgc gcgtgggcga tcgtgaattg aaggccggcc aggactggat ctccatggac
      661 ggttccaccg gagaggtctt catcgggaag ctcagcgcac atccttccga ggtcaaccag
      721 gtgctggtgg acaaccggtt gaaggccgaa gacagcgagc tgtaccagcg tttcgccaag
      781 atcatggcct ggagccacaa ggccaagcgc atgaaggtgc gcaccaacgc cgacacgcca
      841 cacgatgctg ccgtggcgcg ggctttcggc gccgagggca tcggcctctg ccgcaccgag
      901 cacatgttct tcgaggggga ccgcatcctc cccgtgcggg agatgatcct cgccacggac
      961 agcgatggcc gcaggaaggc gctggccaag ctgctgccca tccagcgtga ggacttcgag
     1021 ggcatcttca cggccatgga cggattgcct gtcaacatcc ggctgctgga tccccccctc
     1081 cacgagttcc tgccccagga tgagcccgga cagcgggaaa tggccgaggt gctgggggtg
     1141 gacctcggca cggtggagcg ccgtgtcgcc cagctgcacg agttcaaccc gatgatgggg
     1201 caccggggct gccgcctcgg catcacgttc cccgagatca tccgcatgca ggtccgcgcc
     1261 atcacggagg ccgcgctgaa tgtggccgcc aagggcgtca aggccattcc cgagatcatg
     1321 gtgcccctca tcggcaccgt gcgggaactg agctatacca aggccgagat gctcgacgag
     1381 atcgcccagg tgaacaagga gcgcggcacc cagttcgcct gccccattgg caccatgatc
     1441 gagattcccc gcgccgccat cacgtcggac aagatcgccc aggaagccga gttcttcagt
     1501 ttcggcacca acgacctcac ccagatgggc ttcgggttca gccgcgacga tgcgggctcc
     1561 ttcctgcccg agtacgtggg caagaagatc ctggacgacg acccgttcca gagcctggac
     1621 caggagggca tcggcgagct ggtgcgcatc tcctgcgaga agggccggtc agcccggccg
     1681 ggcatcaagc tgggcgtctg cggcgagcac ggcggcgacc cccgcagcgt gaacttcttc
     1741 caccgcgtgg gcctcgacta cgtgagctgc agcccctacc gggtgcccat cgccaccctg
     1801 gcggcggccc aggcggccct ggaacagtag ggcaccgccc gcgttgtgac cggacaggat
     1861 ccgcccacaa cgcccgaatc cgctatcctg gaaaggccgc gcccccgcgc ggcctttttg
     1921 tcggaagcag ccatggccaa agtgcagagc gaccagcccg agatcatcta ttcgatgatg
     1981 cgggtcagca agatctacaa caacaagccg gtcatcaagg acatctccct cagctacttc
     2041 tacggcgcca agatcggcgt gctgggcctc aacggctcgg gcaagagcac cgtgctgcgc
     2101 atcatggcgg gcgtggacca ggacttcaac ggcgaggcgg tgctcagcaa gggctacacc
     2161 acgggcatcc tcgaccagga accccagctg gaccccgaga agaccgtgcg cgagatcgtc
     2221 gaggagggcg ccgccgagaa ggtgggctgg ctgaaggact acaacgccat cagcgaccag
     2281 ttcgccgatc ccgacgcgga catggacgtg ctgctggcga agcaggccga gctgcaggac
     2341 aagatcgacg cccacgactg ctgggacct
//
LOCUS       DATGWW010000312         1968 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_192902, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000312 DATGWW010000000
VERSION     DATGWW010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1968
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192902"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1968)
                     /locus_tag="VK150_04595"
     CDS             complement(<1..>1968)
                     /locus_tag="VK150_04595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30618.1"
                     /translation="LMSRLVLVLCLAITLNASDYRTKLPTWASTVALSAQADTPPADA
                     DAWVLLDRTEIAYAGDGEIRQRRFRLVQVLSERGRSQATFALRGLGGKASKVKKLQGW
                     NLRPDGELVKLDQDEVVTIHDAGSAEFSTETLTGVTLDRVKTGSLVAFESLESITSPL
                     GPVAREFILETVPVRRWELEVAKKDGWFTNLKAVAIAMERCHFLPWIAQFEEAPGARL
                     ALSNLPALPKDEGAHPDLENILPSVQVRFLDPAFETAQMWNGWDGLAKWTHESYRTHL
                     VAPAISELSGASGLDGLRALAAWMGRALTYKQVYLTPERGWVPERSDEVGRKRYGDCK
                     DLSCFLIAGASTLGFQGHPVLAAISGPQVDPAEAPFPRFNHVIAGIRLTKSLGLAAEV
                     ETPRGRFLLVDPTDPLTPLGFLSGAHRGRHVMICLEGGAQWVRIPDSAIQPSRLALDL
                     EGEATAGGALTAVLQIEETGNAWDLRNVARALGAKGVRDRLVRDLLDLPPTGNLEVQS
                     LGDPLDLTKPFVVKAKVDHPQGFRLNGGERELVGWGLPGPRGVIQKVGVPRRYPIQSR
                     GQTARTLRARLKVPGRLQPVAAERSGDTPFAAYAWQAKAEAEGGGSVLTLRFDHRWKD
                     AEFGFDQLEAGLQAWKKDRTQFKGFREEALA"
BASE COUNT          287 a          697 c          671 g          313 t
ORIGIN      
        1 aaggcgaggg cctcctcgcg gaatcccttg aactgggtgc ggtccttctt ccaggcctgc
       61 agccccgcct cgagctggtc gaacccgaac tccgcgtcct tccaccggtg gtcgaaccgc
      121 agggtgagga cggagccgcc gccttccgcc tcggctttgg cctgccacgc ataggccgcg
      181 aagggggtgt ccccgctgcg ttcggccgcc acgggctgga ggcgcccggg aactttcagc
      241 cgcgcccgta gggtccgcgc cgtctggccc cgggactgga tcgggtacct tcgcggcacg
      301 cccaccttct ggatgacgcc gcgggggccg ggcaggcccc agcccaccag ctcgcgctcg
      361 cctccgttca ggcggaatcc ctgcgggtgg tccaccttcg ccttgaccac gaacggcttc
      421 gtgagatcca gcggatcgcc gaggctctgc acctcgaggt tcccggtggg gggcagatcc
      481 agcaggtccc gcaccaggcg gtcccgcacc cccttggccc ccagggccct cgccacgttg
      541 cgcaggtccc aggcattgcc ggtctcctcg atctgcagga cggccgtcag ggcgcctccc
      601 gcggtggcct cgccttccag gtccagggcc agccggctcg gctggatggc gctgtcggga
      661 atgcgcaccc actgggctcc gccctcaagg cagatcatca cgtggcggcc ccggtgggcg
      721 ccactgagaa agcccagagg cgtaaggggg tccgtgggat ccaccagcag gaagcgcccg
      781 cggggtgtct ccacctctgc cgcgaggccc aggctcttcg tcagacggat acccgcgatg
      841 acgtggttga accgcgggaa cggtgcctcg gcgggatcca cctggggacc cgagatggcc
      901 gccaggacgg gatggccctg gaatcccagg gtcgaggctc cggcgatgag gaaacagctc
      961 aggtccttgc agtccccgta gcgcttgcgg cccacctcgt cggaacgctc cggcacccag
     1021 ccccgctccg gggtgaggta gacctgcttg taggtcaggg ctcgccccat ccacgcggcc
     1081 agggcccgga ggccgtcgag gcccgaggcc ccgctcagct cggagatggc cggagccacg
     1141 aggtgggtcc ggtaggattc gtgcgtccac ttggccagcc cgtcccagcc attccacatc
     1201 tgggcggtct cgaaggcggg gtcgaggaag cggacctgca ccgagggcag gatgttctcg
     1261 aggtcgggat gcgccccttc gtccttcggc agagccggca ggttggagag cgccagcctg
     1321 gcgcccggag cttcctcgaa ctgcgcgatc cagggaagga aatggcaccg ttccatcgcg
     1381 atggccaccg ccttcaggtt cgtgaaccag ccatccttct tggccacttc cagttcccac
     1441 cggcggacgg ggaccgtttc gaggatgaat tcccgggcca ccggtccgag cgggctggtg
     1501 atgctctcca gcgattcgaa cgccacgagg ctgcccgtct tgacccggtc cagggtgacc
     1561 ccggtcagcg tctccgtgct gaactccgcg ctgccggcgt cgtggatggt caccacttcg
     1621 tcctggtcca gcttcaccag ctccccgtcc ggacggaggt tccacccctg cagtttcttg
     1681 accttgctgg ccttgccgcc caggccccgg agggcgaaag tcgcctggct gcgcccgcgc
     1741 tcgctgagga cctggaccag ccggaatcgc cgctggcgga tttcgccatc gcccgcgtac
     1801 gcgatctccg tgcggtcgag gagcacccag gcatcggcat ccgccggagg cgtgtcagcc
     1861 tgggccgaca gggcaactgt ggaagcccag gtcggcagct tggtgcggta gtcggaggca
     1921 ttcagggtga tggccagaca gaggaccaga accagcctgg acatcagg
//
LOCUS       DATGWW010000313         1903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_147510, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000313 DATGWW010000000
VERSION     DATGWW010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1903
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147510"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..>1903
                     /locus_tag="VK150_04600"
     CDS             35..>1903
                     /locus_tag="VK150_04600"
                     /inference="COORDINATES: protein motif:HMM:NF024939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HLP30619.1"
                     /translation="MNKWTLYQMAQICDGMVSDGLGGQEPRFTFNAYISSAEEAYTLL
                     AQVAACARAQTYYGGGQVTPVQDVDRSPVALFTPANVKGGRFTYTGTARRARHTVCNV
                     RWFDPAQQYREVPEMVLADDTYVARYGLQPQTLRALGCTSLGQARRFGRWSILSEMEE
                     DESVAFSSGLEGIVARPGDIILIQDPARARVRLGGRLVAATTTTVTLDNPVTLQAGQT
                     YTLWAQLQDGSVVARTVTTSAGTTRILTISGSFPTAPQAQAVWMLSSTSLPASRWSVL
                     SVKENAEGTYDIVALANYQPKYASADSTDTLVARISDPLTCPAPTGLAAAHTVDRSHL
                     DRLVYVLSATWTAPATTAPVTFQAQARLAGGPWQDMSINGCSAVLQDVEIGAWDVHVR
                     GVYRWGLSDWTSPAAHTIANAGDSPAETALAGLAAVADDGTLSKGEKAGVILKYNTAV
                     ADYALLVAKAQATGASYSAYAAAYTALQSYLLGLSPAYSDVTQDTPINSTDWQTTWKN
                     YYAASTDLLLKLAGAPPSAVDLVATTNWSLATNASAPVIDGVTSAAAQTVILAGQTTA
                     SQNGLYQIAYTPAAGGGYLYPTTGAYTYTGQAGTYTNGANAYDGTSGAPTTATYSTL"
BASE COUNT          316 a          756 c          584 g          247 t
ORIGIN      
        1 ctacggatgc gggcgctggc tcggggcgtc cgggatgaac aagtggaccc tctaccagat
       61 ggcccagatc tgcgacggca tggtcagcga cggcctgggt gggcaggagc cacggttcac
      121 attcaacgcc tacatcagca gcgcggagga agcctacacc ctcctggccc aggtggcggc
      181 ctgcgcccgc gcccagacct actacggcgg cgggcaggtc acgcccgtcc aggacgtgga
      241 ccgctccccc gtcgcgctct tcacgcccgc caacgtcaag ggtggccggt tcacctacac
      301 cggcacggcc aggagggcca ggcacacggt ctgcaacgtc cgttggttcg atccggccca
      361 gcagtaccgc gaggtcccgg agatggtcct ggcggatgat acctacgtcg cccgctacgg
      421 cctccagccc cagaccctcc gggccctggg ctgcacctcc ctggggcagg cccgcaggtt
      481 cgggcggtgg tcgatcctct ccgagatgga ggaggacgag agcgtggcat tttcgagcgg
      541 cctggagggc atcgtggccc ggccggggga tatcatcctg atccaagacc cggcccgcgc
      601 gcgggtgcgc ctgggcgggc gcctggtggc cgccacgacc accaccgtca ccctcgacaa
      661 ccccgtgacc ctccaggccg ggcagaccta caccctctgg gcccagctcc aggacggctc
      721 cgtggtcgcc aggaccgtca ccacctccgc gggcaccacg cgcatcctca ccatctctgg
      781 atcgttcccc acggcgcccc aggcccaggc ggtgtggatg ctctcctcca cctcgctgcc
      841 cgcctccaga tggagcgtcc tcagcgtcaa agaaaacgcg gagggaacct acgacatcgt
      901 ggccctggcc aactaccagc ccaagtacgc ctctgccgac tccacggata ccctcgtggc
      961 ccggatctcc gaccccctca cgtgcccggc gcccaccggc ctggccgcgg cccacaccgt
     1021 ggaccggagc cacctggacc gcctagtcta cgtcctctcg gccacctgga ccgcgccggc
     1081 caccaccgcc cccgtcacgt tccaggccca ggcccggctc gccgggggac catggcagga
     1141 catgagcatc aacgggtgct cagccgtgct ccaggacgtg gagatcggtg cctgggatgt
     1201 ccacgtccgg ggcgtctacc gctggggcct ctcggactgg accagccccg cggcccacac
     1261 catcgccaac gccggggact cccctgcgga gaccgccctg gccgggctgg ctgcggtcgc
     1321 ggacgatggc accctgagca agggcgagaa ggccggcgtg atcctcaaat acaacacggc
     1381 ggtggccgac tacgccctcc tcgtggccaa ggcccaggcc acgggcgcca gctactccgc
     1441 ctatgctgcg gcctacaccg ccctccagag ttacctcctg gggctgtctc cggcctacag
     1501 cgacgtcacg caggacaccc cgatcaactc cacggactgg cagaccacct ggaagaacta
     1561 ctatgccgcc agcacggacc tcctcctgaa gttggccggg gcacccccca gcgccgtgga
     1621 tctggtggcc accaccaact ggagcctcgc caccaacgcc agcgcccccg tgatcgacgg
     1681 cgtgaccagc gccgcggccc agaccgtcat cctggccggg cagaccacgg ccagccagaa
     1741 cggcctgtac cagatcgcct acaccccggc ggccggcggc ggctacctct accccaccac
     1801 gggggcctac acctacaccg ggcaggccgg gacctacacc aacggcgcga acgcctacga
     1861 cggcaccagc ggggccccca ccacggccac ctactccacc ctc
//
LOCUS       DATGWW010000314         1787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_23424, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000314 DATGWW010000000
VERSION     DATGWW010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23424"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..670
                     /locus_tag="VK150_04605"
     CDS             <1..670
                     /locus_tag="VK150_04605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30620.1"
                     /translation="IGTPTSGAPGGQIEQILIQLRSRQIANEQVETYERQQSAAVKER
                     ELREAEAKAKQQTLLTESEISINVQSNQGKADYAKAQQQAAQIQTLAGAEAEKVRLMG
                     EGEAKRIKVMAEAQAEQAARVGIAQAMAIEEQVRAYGGPQFQLVQQVMSRFAEAIEKS
                     QVDVVPKIHMGGGEKGGGSLIESLLGLLLSEKAGQLAGVSVPTAANPEAEALKAAMRQ
                     SLTK"
     gene            complement(735..1097)
                     /locus_tag="VK150_04610"
     CDS             complement(735..1097)
                     /locus_tag="VK150_04610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30621.1"
                     /translation="MSFRRALPAQFCLLLVAALAMRLGFPLILIVPLTGMLMLAAMVP
                     WTEVRALMAIVLGFCTLVWAVMTVMRVELRMALEQPYLRLAAILGGVTLFNAWAAWLL
                     WSSRKAIRAELAATSSER"
     gene            1263..>1787
                     /locus_tag="VK150_04615"
     CDS             1263..>1787
                     /locus_tag="VK150_04615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30622.1"
                     /translation="MLAPVFFLAPAPPPPQVLELASALPPPAEALRQAKDWAGLADWF
                     EAQTPAVRGRHFETWLQALQKSQRWGRLVEICDALQPQLEATSGPRLGSYRFYRARSL
                     SGLGRHAEAAAAHAENGRLGDPDGFSNACTEARLGMAWPALLAYAEALLIQRPENGLG
                     LAWKGEALARLGRFS"
BASE COUNT          324 a          628 c          599 g          236 t
ORIGIN      
        1 gatcggaacc cccaccagcg gagcgccggg cggacagatc gagcagatcc tcatccagct
       61 ccggagccgc cagatcgcca acgagcaggt ggagacctac gagcgtcagc agagcgcggc
      121 ggtgaaggaa cgggagctgc gcgaagccga ggccaaggcc aagcagcaga ccctgctcac
      181 cgagtccgag atctccatca acgtgcagag caaccagggc aaggccgact acgccaaggc
      241 ccagcagcag gctgcgcaga tccagaccct cgccggcgcc gaggccgaga aggtgcgcct
      301 catgggcgaa ggcgaggcca agcgcatcaa ggtcatggcc gaagcccagg ccgagcaggc
      361 cgcccgcgtg ggcatcgccc aggccatggc catcgaggag caggttcgcg cctacggcgg
      421 cccgcaattc cagctggtgc agcaggtcat gagccgcttc gccgaggcca tcgagaagtc
      481 ccaggtggac gtggtcccca agatccacat gggcggtggc gagaagggcg gcggcagcct
      541 catcgagagc ctgctgggtc tgctgctgag cgagaaggcc gggcagctgg cgggggtgtc
      601 ggttcccacc gccgcgaacc cggaggcgga agcgctcaag gcggccatgc gccagagcct
      661 gacgaaatag acgccagaca cccgaagccc ccggcggcag gtccctgccc cgggggcttc
      721 ccctgtggcg tcgcctaccg ctccgaggag gtggcggcca gctccgcgcg aatggctttg
      781 cggctcgacc agagcagcca cgccgcccag gcgttgaaga gggtcacgcc tcccaggatg
      841 gccgccaggc gaaggtaggg ctgctcgagg gccatgcgca gttccacccg catgacggtc
      901 atgacagccc agaccagggt gcagaacccc agcacgatgg ccatgagggc ccgcacctcg
      961 gtccagggga ccatggcggc cagcatcagc atgcccgtca acgggacgat caggatcagc
     1021 gggaagccca ggcgcatcgc cagcgcggca accaggagca ggcagaactg ggcgggaaga
     1081 gcgcggcgga aagacatgca acctccatcc ccttatttca taccgttgat tcctaaatat
     1141 gggtcacaac ctcgcattaa ggccctgcct catggatgcc ccctccatct accggcatgg
     1201 tttggttgaa taggtgctga cctgcccatc ccttcgcccc ggcccatccg ttggagcttc
     1261 cagtgctcgc acccgtgttc ttcctggctc ccgcaccgcc acctccccag gtgctggaac
     1321 tcgcctccgc gctgccgccc ccggccgaag cccttcgcca ggccaaggat tgggcggggc
     1381 tggccgactg gttcgaggcc cagacccccg ccgtgcgcgg ccgtcacttc gaaacctggc
     1441 tccaggcgct tcaaaagagc cagcgctggg gccgcctggt ggagatctgc gacgccctgc
     1501 agccccagct ggaggccacc tccgggccgc gtctcgggag ctaccgcttc tatcgggccc
     1561 ggagcctcag cgggttgggc cgtcatgcgg aggccgcggc ggcccacgcc gagaacggac
     1621 gcctgggcga tccagacggc ttctccaacg cctgcaccga agcccggctg ggcatggcct
     1681 ggccggccct gctggcctat gccgaggcgc tgctcatcca gcggccggaa aacggccttg
     1741 gcctggcctg gaagggcgag gccctcgccc gtttgggacg tttctcc
//
LOCUS       DATGWW010000315         2478 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_296986, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000315 DATGWW010000000
VERSION     DATGWW010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2478
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296986"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1121)
                     /locus_tag="VK150_04620"
     CDS             complement(<1..1121)
                     /locus_tag="VK150_04620"
                     /inference="COORDINATES: protein motif:HMM:NF013707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HLP30623.1"
                     /translation="MTASLAAPALTKGAKTRINDFSIQVATVNGSGSQTANTVLLRAI
                     FQMGVFVSGKNLFPSNIAGLPTWFTIRASAQGYVARKASNEMLILMNPETAKEDIAKA
                     DPGALVIYDEPLQLDKLRDDLDFTPVPFQKLVTASCPEPKLHKLVKNMIYVGVASRLL
                     GIDMEEVKKAIAKQLKGKAKAIELNQTACMAGYDWAMENLPDQDHVKVVRDNKTQGLI
                     IVDGNEACALGALFAGVTVVGWYPITPASSLVETFIEYAEEYRKDPKTGKSTVAIVQM
                     EDELASAGVVLSAGWAGARSMTSTAGPGVSLMSEFIGLGYYVEAPGVFFNVARTGPST
                     GLPTRTQQSDVELCAKCSHGDTQHINLYPGNMEECFQFS"
     gene            1337..2002
                     /gene="lexA"
                     /locus_tag="VK150_04625"
     CDS             1337..2002
                     /gene="lexA"
                     /locus_tag="VK150_04625"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HLP30624.1"
                     /translation="MKASDLTKRQQAVLKFIRTFVQDEGRSPTLAEIAKGVGSSAVST
                     IHKHVQHLMDKGFLVRSHGKGNNLVVAAEVDPGSGSHRALRPEPRPESAPTTRIFPFC
                     GDVAAGSPILPESRALPIEVPNSIHRQRDELFVLRVRGDSMVDDAILDGDLVVLQRKG
                     EYRNGDRVVALIDQEEVTLKEFRRDAKGVWLIPHNPELQPRCYPPQAIDIQGVLVGVM
                     RSC"
     gene            complement(2095..>2478)
                     /locus_tag="VK150_04630"
     CDS             complement(2095..>2478)
                     /locus_tag="VK150_04630"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HLP30625.1"
                     /translation="QDPTPFGIIAADNYLGDLISDLCAAFIGGMGVAPSLSWAPHRPF
                     RCSVLAEPVHGSAPDLAGQGLANPVGMILSTALLFRHLGWEPEAAGVETAVSAALGMG
                     ARTRDLGGSLGTQDMGTAIRRHLPT"
BASE COUNT          420 a          775 c          865 g          418 t
ORIGIN      
        1 taggagaact ggaagcactc ctccatgttg ccggggtaga ggttgatgtg ctgcgtgtcg
       61 ccgtggctgc acttggcgca gagctccacg tcggactgct gcgtgcgggt gggcaggccc
      121 gtgctggggc ccgtgcgggc cacgttgaag aacacgccgg gcgcctcgac gtagtagccc
      181 aggccgatga actcgctcat gagcgagacg ccgggaccgg cggtggaggt catggagcgg
      241 gcgccggccc agccggcgga gagcaccacg ccggccgagg ccagctcgtc ctccatctgc
      301 acgatggcga cggtggactt gccggtcttc gggtccttcc ggtattcctc ggcgtactcg
      361 atgaaggttt cgaccaggct ggaggcgggg gtgatgggat accagcccac cacggtcaca
      421 ccggcgaaga gggcgcccag ggcgcaggcc tcgttgccgt ccacgatgat gagcccctgg
      481 gtcttgttgt cgcgcacgac cttgacgtgg tcctggtcgg gcaggttttc catggcccag
      541 tcgtagcccg ccatgcaggc ggtctggttc agctcgatgg ctttggcctt gcccttcagc
      601 tgcttggcga tggccttctt gacctcctcc atgtcaatgc cgagaaggcg ggaggccacg
      661 ccgacgtaga tcatgttctt caccagcttg tgcagcttgg gctcggggca ggaggcggtc
      721 accagcttct ggaagggcac cggggtgaag tccagatcgt cgcgcagctt gtcgagctgc
      781 aggggctcgt cgtagatcac gagcgcgccg ggatcggcct tggcgatgtc ttccttggcg
      841 gtctcggggt tcatgaggat cagcatctcg ttgctggcct tgcgggcgac gtagccctgg
      901 gcgctggcgc ggatggtgaa ccaggtgggc aggccggcga tgttcgaggg gaacaggttc
      961 ttcccgctca cgaacacgcc catctggaag atggcccgca gcagcaccgt gttcgccgtc
     1021 tgggaacccg acccgttgac cgtggccacc tggatggaaa aatcattgat ccgggttttc
     1081 gcccccttgg tcaaggcagg ggcggcaagg ctggcagtca tgaggactcc tttctcatct
     1141 ggtcgggggg gcgccgagga ggtcggaaag acgactcgga gggcgtaaat acttgacccc
     1201 taaggccgtc tctcagtatg gcagacgcgg cggaagcgtt ctatcgaggg tcttggggcg
     1261 gggaaaaccg gcggtctgaa ataaagcgaa aaaaaaggga ttgacgacct cgggctccac
     1321 tcctaccttg aaactcatga aagccagcga tctcaccaag cgtcagcagg ccgtgctgaa
     1381 gttcatccgg accttcgtcc aggacgaagg gcgaagcccc accctggccg aaatcgccaa
     1441 gggggtgggt tccagcgcgg tgtccaccat ccacaagcat gtccagcacc tcatggacaa
     1501 gggcttcctc gtgcgcagcc acgggaaggg caacaacctg gtggtggccg ccgaggtgga
     1561 cccgggctcc gggtcccacc gggccctccg gcccgagccc cggccggaat ccgcgcccac
     1621 cacgcggatc ttccccttct gcggcgacgt ggccgccggt tcgccgatcc tgcccgagag
     1681 ccgcgccctg cccattgagg tgcccaacag cattcaccgg cagcgcgacg agttgttcgt
     1741 gctgagggtt cgcggcgact cgatggtgga cgacgccatc ctggacggcg acctggtggt
     1801 gctgcagcgc aagggcgagt accggaacgg ggatcgcgtg gtggccctca tcgaccagga
     1861 ggaggtcacc ctcaaggagt tccgtcgcga cgccaagggc gtgtggctca tcccccacaa
     1921 ccccgagctc cagccccgct gctacccgcc ccaggccatc gacatccagg gcgtgctcgt
     1981 cggcgtcatg cgcagttgct gacgcatacg agcatggccg tcatgcgcag ttgctgacgc
     2041 ctacgggcag ggtcgtcatg cgcaattccc agaacccgat gcgcaggacc tggctcaagt
     2101 gggaaggtgc ctgcggatgg ccgtgcccat gtcctgggtg ccaagggacc cgcctaaatc
     2161 gcgggtccgg gctcccattc caagggcggc tgatacggcg gtctccacgc ccgcagcctc
     2221 cggctcccag cccaggtggc ggaacagcag ggcggtgctg aggatcatgc ccacggggtt
     2281 ggccaggccc tggccggcga ggtcgggagc ggatccatga acaggctcgg cgagcaccga
     2341 gcagcggaag ggccggtggg gcgcccagct gagggaaggc gccacgccca tgccgccgat
     2401 gaacgcggcg cagaggtcgc tgatgaggtc acccaggtag ttgtccgccg cgatgatccc
     2461 gaaaggggtg gggtcctg
//
LOCUS       DATGWW010000316         2066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_336494, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000316 DATGWW010000000
VERSION     DATGWW010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336494"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            154..1533
                     /gene="ffh"
                     /locus_tag="VK150_04635"
     CDS             154..1533
                     /gene="ffh"
                     /locus_tag="VK150_04635"
                     /inference="COORDINATES: protein motif:HMM:TIGR00959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HLP30626.1"
                     /translation="MFDSLTQKLSQAMKALRGQSKLTEANLEAVLREVRMALLEADVH
                     VSVARTFLQRVKEKALGAEVMQGLNPAQAFIDIVHRELVEIMGGQAPEHPITFSSKPP
                     TVVMMVGLQGAGKTTTCGKLAVYLKKMGRSPILVPADVYRPAAIEQLHVVAKDAGVPS
                     FRTEEMDPVAICAAAVAEARLKGWDVVVLDTAGRLHLDETLMEELARIKERCEPSEIL
                     FVADAMTGQDAVRSATAFHEKLGITGVVLTKTDGDTRGGAAFSIKHATGQPLKFVGEG
                     EKLEDFQRFHPDRMAQRILGMGDVLSLIEHAKDKLDEKEAEVMAKRLAKNQFTLDDMR
                     KQFQQVQKLGSMNKILGMLPGLGQMKDQLASVATDKRIKHLEAIINSMTPAERANHNL
                     LDGKRKRRIAAGCGRPVSEINQLIKQFVETKKMMGQMNDPKFMARMQRMAKMGGGMGG
                     VGGGPNLPF"
     gene            1622..1864
                     /gene="rpsP"
                     /locus_tag="VK150_04640"
     CDS             1622..1864
                     /gene="rpsP"
                     /locus_tag="VK150_04640"
                     /inference="COORDINATES: protein motif:HMM:TIGR00002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HLP30627.1"
                     /translation="MLSIRLARNGAKKRPFYHIVVSENDRIPTGQAVEVLGFVNPIAG
                     SGEAVRIDVDKAKSWIQKGAQPSKTVLDLFKKNQII"
BASE COUNT          400 a          696 c          659 g          311 t
ORIGIN      
        1 cgtgctggag caggtagggg ctgaggcttt ccgcgaggtg attgggcata atcccgactc
       61 catcggtcag gattatgccc gaggattcct tttcgacgcc gggaaagacc tcgacgaccg
      121 gtacaatggt cgtttggtcc acgacggggt cccatgttcg acagcctcac ccagaaactc
      181 agccaggcga tgaaggccct ccggggccaa tccaagctga cggaagccaa cctcgaggcg
      241 gtgctgcgcg aagtccgcat ggccctgctg gaggcggacg tccacgtgag cgtggcccgc
      301 accttcctgc agcgggtgaa ggagaaggcc ctgggcgccg aggtcatgca gggcctcaac
      361 ccggcccagg ccttcatcga catcgtccac cgcgagctgg tggagatcat gggcggccag
      421 gccccggaac accccatcac gttcagctca aagccgccca cggtggtgat gatggtgggc
      481 ctgcagggcg cgggcaagac caccacctgc ggcaagctcg ccgtctacct gaagaagatg
      541 gggcgctccc ccatcctggt gcccgccgac gtctaccgcc ccgcggccat cgagcagctg
      601 cacgtcgtgg cgaaggatgc cggcgtgccg tccttccgca cggaggaaat ggatccggtc
      661 gccatctgcg ccgccgccgt ggccgaggcc aggctgaagg gctgggacgt ggtggtgctg
      721 gacaccgccg gtcgcctgca cctggacgag acgctcatgg aggagctggc ccggatcaag
      781 gagcgctgcg agccctccga gatcctcttc gtggccgacg ccatgacggg ccaggacgcc
      841 gtccgcagcg ccaccgcctt ccacgagaag ctgggcatca ccggcgtggt gctcaccaag
      901 actgatggcg acacccgcgg cggcgcggcc ttcagcatca agcacgccac gggccagccc
      961 ctgaagttcg tgggcgaggg cgagaagctg gaggacttcc agcgcttcca cccagaccgc
     1021 atggcccagc gcatcctggg catgggcgat gtcctcagcc tcatcgagca tgccaaggac
     1081 aagctcgacg agaaggaagc cgaggtcatg gccaagcgcc tggccaagaa ccagttcacc
     1141 ctcgacgaca tgcgcaagca gttccagcag gtgcagaaac tgggctccat gaacaagatc
     1201 ctgggcatgc tgccgggcct gggtcagatg aaggaccagc tggccagcgt ggccaccgac
     1261 aagcgcatca agcacctgga agccatcatc aactccatga cccccgccga gcgcgccaac
     1321 cacaacctgc tggacggcaa gcgcaagcgc cgcatcgccg ccggctgcgg ccggcccgtg
     1381 agcgagatca accagctcat caagcagttc gtggagacga aaaaaatgat ggggcagatg
     1441 aacgatccca agttcatggc ccgcatgcag cgcatggcca agatgggcgg cgggatgggt
     1501 ggcgtgggcg gcggccccaa cctgcccttc tagccccccc ggggacggcc cccgcccccg
     1561 gcgaattaac ccttgggatg acgggaatgc cgcgttatac tctcctgctc agggagtgtc
     1621 catgctgtcc atccgtctcg ctcgcaatgg tgccaagaag cgccccttct accacatcgt
     1681 cgtctccgaa aatgaccgca tccccaccgg ccaggccgtg gaagtgctgg gcttcgtgaa
     1741 ccccatcgcc ggctccggcg aggcggtccg catcgacgtc gacaaggcca agtcctggat
     1801 ccagaagggc gcgcagccct ccaagaccgt gctcgatctg ttcaagaaga accagatcat
     1861 ctagccggtt tccgaccatt cgagagccgg gccctggtcc ggctttcttt gttcatcctg
     1921 gagaagccat gaacctcgaa ggtttcctgc gcgatgtgct gaccccgctg ctggaccacc
     1981 ccgagtccct gaaggtcgaa gtgtccggcg agggccgccg gcgggacgtg ctggtctacg
     2041 ccgacccaaa ggaccgcggc cgcatc
//
LOCUS       DATGWW010000317         2182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_249528, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000317 DATGWW010000000
VERSION     DATGWW010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249528"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..307
                     /locus_tag="VK150_04645"
     CDS             <1..307
                     /locus_tag="VK150_04645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30628.1"
                     /translation="EASLKDLRRRLKPGGRLVIGECLKPDLDTPLYLEFFFSFIKSFT
                     EVTLDPRWRPRHGFLTPEAWDEALKHAGFRRVEHTPPPRPLMDEHPSFSVGAMCATA"
     gene            complement(369..2027)
                     /locus_tag="VK150_04650"
     CDS             complement(369..2027)
                     /locus_tag="VK150_04650"
                     /inference="COORDINATES: protein motif:HMM:NF025679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4382 domain-containing protein"
                     /protein_id="HLP30629.1"
                     /translation="MRPSLRTLSLLAVPALTTLAFTVACGSSSSTSATPAPTATGSAS
                     IILTDAPSDQWSAVEVVVTKVTLLNKADHTREVVAFQGATAKINLVDLDSVGELLATA
                     QLPVGTYDALRVTIDPASVNLVKADGTAVPSSQVHVTGATVQVGLSADLVVTANGSNA
                     VQLDFDLGHPLFLVQLPGGDWVMNLQVRHRPNANGMMGLGQLMFRHRRGTIASVGASS
                     FVLHTDSGNDLTVNVDAGAWFFDADARTLGSFAGLSAGKFALVSLRMQADGSLWAVRV
                     WYGASALPGWTPEGHVVGVDTVNQRLLVSSGATVPRVIAIDADTAFTFRNGQALGTGQ
                     AMLANVWTGFKVQVEVKDPLQVPMHARAVNIQRAVDGGVIKAADASAFTYQHLLAGDR
                     THAYGNPFTWWYLGFPGVTSSSTGEFAAACAGSGDVRIQGVSDLVWNGGSAAWDAGNA
                     VFLPSALPQGTISTSYNGGQVGFTFTNSAAASQTLTVSLNTTVGMQPAVVEVANQAGL
                     VTVTALPESAWATKLVTPAKARVAVVPKPDGTYAAYAVAIFTGF"
BASE COUNT          332 a          741 c          777 g          332 t
ORIGIN      
        1 cgaagcctcc ctcaaggacc tgcgccgccg cctgaagccc ggtggccgcc tggtgatcgg
       61 cgagtgcctg aagcccgacc tcgacacccc gctctacctg gaattcttct tcagcttcat
      121 caagagcttc acggaggtca cccttgatcc ccgatggcgc ccgcggcacg gtttcctcac
      181 gcccgaggcc tgggacgagg ccttgaagca cgccggattc cgtcgcgtcg agcacacgcc
      241 cccgccgcgc ccgctgatgg acgagcaccc gagtttctcc gtcggtgcca tgtgcgccac
      301 ggcctgaacc gctctccaga aacgtggagc ggcgccgagg cgccgctcct tctgaggcca
      361 gggcgcactc agaatccggt gaagatcgcc accgcgtagg ccgcgtaggt gccgtccggc
      421 ttgggcacca cggcgacccg agccttggcg ggggtcacca gcttggtcgc ccaggccgat
      481 tcgggaaggg cagtcacggt caccaagccg gcctggttgg ccacttccac caccgcgggt
      541 tgcatgccca ccgtggtgtt gaggctgacg gtcagcgtct ggctggcggc ggcggagttg
      601 gtgaaggtga agcccacctg gccgccgttg taggaggtgc tgatggtgcc ctggggaagg
      661 gccgagggca ggaacacggc gttgccggca tcccacgcgg cgctgccgcc attccacacc
      721 aggtcgctca cgccttggat ccgcacgtcc ccggagccgg cgcaggccgc ggcgaactcg
      781 ccggtgctgc tggaggtcac gccggggaag cccagatacc accaggtgaa ggggttccca
      841 taggcgtggg tgcggtcacc ggccagcagg tgctgatagg tgaaggcgct ggcatcggcc
      901 gccttgatga cgccgccatc caccgcccgc tggatgttca cggcccgggc gtgcatgggg
      961 acctgcagcg ggtccttcac ctccacctgc accttgaagc ccgtccacac gttggcgagc
     1021 atggcctgcc ccgtgcccag cgcctggccg ttgcggaagg tgaaggccgt gtccgcgtcg
     1081 atggcgatga cgcggggcac cgtggcgccg ctggacacca acagccgttg gttgacggtg
     1141 tccacgccga ccacgtggcc ttcgggcgtc cagcccggga gggcgctggc gccgtaccac
     1201 acccgcacgg cccagaggct gccgtccgcc tgcatgcgga gggacaccag ggcgaacttg
     1261 ccggcggaga gcccggcgaa gctgcccagg gtcctggcgt cggcgtcgaa gaaccaggcg
     1321 ccggcatcca cgttcacggt gaggtcgttg ccgctgtcgg tgtgcaacac gaagctggac
     1381 gcccccaccg aggcgatggt gccgcggcgg tggcggaaca tcagctgacc caggcccatc
     1441 atgccgttgg cgttgggccg gtgcctgacc tggaggttca tcacccagtc gccgccgggc
     1501 agctgcacca ggaacagagg atggcccagg tcgaagtcca gctggaccgc gttgctgccg
     1561 ttggcggtca ccaccaggtc ggcgctgagc cccacctgca cggtggcgcc ggtcacgtgc
     1621 acctgactgg agggcacggc ggtgccgtcg gccttcacca ggttcacgct ggcggggtca
     1681 atggtgacgc gcagggcgtc gtaggtcccc accggcagct gggccgtggc gagcagctcg
     1741 cccacgctgt cgaggtccac caggttgatc ttggccgtgg cgccctggaa ggccaccacc
     1801 tctcgggtgt ggtcagcctt gttcagcagg gtcaccttgg tgaccaccac ctcgacggcg
     1861 gaccactggt cggagggggc gtccgtcagg atgatggacg cgctgcccgt ggcggtgggc
     1921 gcaggcgtgg ccgaggttga gctgctgctc ccgcaggcca ccgtgaaagc cagggtcgtc
     1981 agggcgggca cggccagcag ggagagggtg cggagcgaag ggcgcatggg gatctccgtg
     2041 ggtcggggcc ggagggctcc cgatgagggg gtggggaatc ggacaccccc actgaccccg
     2101 ccctggcggg aagggttgat ccgcaatttc cagggggatt ccaaacctca caaggcgata
     2161 cttccccatg gcctccaccc tc
//
LOCUS       DATGWW010000318         2175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_336525, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000318 DATGWW010000000
VERSION     DATGWW010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336525"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2175
                     /locus_tag="VK150_04655"
     CDS             <1..>2175
                     /locus_tag="VK150_04655"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HLP30630.1"
                     /translation="VLESLERGVRRGLVADASGVATAAGLLPGAYRLQGQVIHLKADE
                     RVHLRLKAEPAQATVAVEASPLRAESSSVSTQTVFDTESLVRLPFSPHRYVEHGYLAP
                     GVTPSGKPEPVVLGSMLDGNAYLVDGMATGLSSTGRFGMNLSTEILESQTLTTGGHKA
                     EVGFASGGVYSMVTKSGGNDFHGSVFTSRIFRGLNARPEAGKATTPEERPTDADEVGF
                     SLGGPLVKDRLFFFGAFNRQLLSSDFENVQPVGTAPHRRSQEEDRSYRFLKLTWLATA
                     DHRLEFSYFGDPVTQANFDTAGDSSVKDFQQPNRTRGGDSYLLKHVGALGPQLTWENT
                     VGLHRTSFHWSPATPSAGPFRGQLDAPGGETFGAYGEDRLDRIQNLTVRSEFSWFAGG
                     HQVKGGFQGLASEYTKVFQRPSFGVAYLDRAAGGAGPAAGDLAAIQAGLLALNGSSYG
                     YAAADSLTTASPVSGSLAGGRASYLYQRTLADGGSYGNPLKQQVLGVFAQDDWAFASG
                     WTANLGLRVDRASLDAEDGRTLYRQTLLSPRLGLAWDPAADGRTRLFAYAGRIYSPPT
                     PGNLATAGATTGGPATARQVWIPSLNDWRTWQATGVQGVANVAVADLKAPRTDLYQLG
                     AERIQELPWVGAWTLEATLTFKTVRDLVDTYSATYGYLPELDAQANSSSTRKVIANLP
                     GLKRDYRGLDLVARRNFEGGHHLQVSYSQGDLNGNTEVGNVNT"
BASE COUNT          340 a          839 c          718 g          278 t
ORIGIN      
        1 ggtgctggaa tcgctggaac ggggtgtgcg ccgcggcctc gtggccgacg cgtcgggagt
       61 ggccacggcc gcggggctgc tgccgggcgc ctaccgcctg cagggccagg tgatccacct
      121 caaggccgac gagcgggtgc acctccgcct gaaagccgag cccgcccagg ccaccgtggc
      181 ggtcgaagcc tcccctctgc gggccgagag cagctcggtc agcacccaga ccgtcttcga
      241 caccgagagc ctcgtccggc ttcccttctc gccccaccgc tacgtggaac acgggtatct
      301 ggcgcccggc gtcacgccgt cgggcaagcc cgagcccgtg gtgctcggct ccatgctgga
      361 cggcaacgcc tacctggtgg acggcatggc cacgggcctc agctccacgg gccgcttcgg
      421 catgaacctc tccacggaga tcctcgagag ccagaccctc accaccggcg gccacaaggc
      481 cgaggtgggc ttcgcttccg gcggggtcta cagcatggtg accaagagcg gcggcaacga
      541 cttccatggt tctgtcttca ccagccgcat cttccggggc ctgaacgcca ggcccgaggc
      601 gggcaaggcc accacccccg aggagcggcc cacggacgcc gacgaggtgg gcttcagcct
      661 gggcgggccc ctcgtgaagg accggctctt cttcttcggc gccttcaacc ggcagctcct
      721 gagctcggac ttcgagaacg tgcagcccgt gggcaccgcc ccccaccgcc gcagccagga
      781 ggaggaccgc agctaccgct tcctcaagct cacctggctg gccaccgccg accaccgcct
      841 cgagttcagc tacttcggcg atcccgtcac ccaggccaac ttcgacaccg ccggcgacag
      901 cagcgtgaag gacttccagc agccgaaccg cacacggggc ggcgacagct acctcctgaa
      961 gcacgtgggc gccctcggcc cgcagctcac ctgggagaac accgtgggcc tgcaccgcac
     1021 cagcttccac tggtcgcccg ccacccccag cgccgggccc ttccgcgggc agctggacgc
     1081 ccccggcggc gagaccttcg gcgcctacgg cgaggaccgt ctggaccgca tccagaacct
     1141 gacggtccgc agcgaattca gctggttcgc cggcggccac caggtcaagg gcggcttcca
     1201 ggggctggct tccgagtaca ccaaggtctt ccagcggccg tcgtttggcg tcgcctacct
     1261 ggatcgcgcc gccggcggcg ccggtcccgc cgcgggcgac ctggcggcca tccaggcggg
     1321 cctcctcgcc ctcaacggca gcagctacgg ctacgcggcg gcagacagcc tcaccaccgc
     1381 cagccccgta tccgggagcc tggccggggg ccgcgccagc tatctgtacc agcgcaccct
     1441 ggcggacggc ggctcgtacg gaaacccgct gaagcagcag gtactcggcg tcttcgccca
     1501 ggacgactgg gccttcgcca gcggttggac cgccaacctg ggcctgcggg tggaccgcgc
     1561 cagcctggac gccgaggatg gccggacact ctaccgccag accctgctga gcccgcgcct
     1621 gggcctcgcc tgggatcccg cggccgatgg ccgcacgcgg ctcttcgcct acgccgggcg
     1681 catctacagc ccgcccaccc cgggcaacct cgccaccgcc ggcgccacca ccggggggcc
     1741 cgccacggcc cggcaggtgt ggatccccag cctgaacgac tggcgcacct ggcaggccac
     1801 gggcgtgcag ggcgtggcga acgtggccgt ggcggacctc aaggccccgc gcacggacct
     1861 ctaccagctg ggtgccgagc ggatccagga gctgccctgg gttggggcgt ggacgctgga
     1921 agccaccctc accttcaaga ccgtccgcga cctggtggac acctacagcg ccacctacgg
     1981 ctacctgccg gagctggacg cccaggcgaa cagttcgtcc acccgcaagg tcatcgcgaa
     2041 cctgccgggg ctgaagcggg actaccgcgg cctcgacctg gtggcccggc gcaacttcga
     2101 gggcggccac cacctgcagg tgagctacag ccagggcgac ctgaacggca acaccgaggt
     2161 gggcaacgtg aacac
//
LOCUS       DATGWW010000319         1838 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_192942, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000319 DATGWW010000000
VERSION     DATGWW010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192942"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="VK150_04660"
     CDS             complement(<1..285)
                     /locus_tag="VK150_04660"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HLP30631.1"
                     /translation="MSLGAASSHQAPSPGQGHAPSQARGGAKEAVQHRFMTFFLDGRQ
                     YGLPLRHVAEITPLRDLNKLPHMPRAVEGILDLRGRVVPVVNLRARMSLPP"
     gene            complement(282..>1838)
                     /locus_tag="VK150_04665"
     CDS             complement(282..>1838)
                     /locus_tag="VK150_04665"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HLP30632.1"
                     /translation="AELAGAIFGTAFNPFSMFQMVDLVGRLLYRQMVPREPLVTLDSF
                     DPRTFHLDLVMVIEATEPIEEIRKVFGAVTHATITFHPLSLGSAPAEGAGDGAPAAED
                     RRKAGRRNSDDKGASDTIRVSQAKLEQFMNIVAELIISKTMISHLLERLVPQVNGHPA
                     AAVAKELAHASVYLDHVSKEIQASVLGIRMVPVKTIFSKFPRMLRDLAKASGKKIDLQ
                     MAGEDTEIDKSIIEELGDPMIHLIRNSADHGIEAPEARLKAGKSEVGTVILRARHEGD
                     SVIVEIEDDGKGIDPAVIRAKAVEKGLMSQDRADAMADDEVIELIFAPGFSTAAKVTD
                     ISGRGVGMDVVRSNVRKLNGRVGVRSTVGKGSIFTIKLPLTLAIIDALLVKSGGQVFA
                     LPGTAVEETLIVPPESISHLTSRQAINLRGEVLGVCRLKHLLKSNTPTSPADEADGLS
                     VVVVSAAGRRLGIIVDAFVRRQEVVIKPLAPYLASLPGISGASIMGDGGVVLILDPAE
                     LLQLAVQEAV"
BASE COUNT          269 a          608 c          655 g          306 t
ORIGIN      
        1 gggcggcagc gacatccggg cgcgcaggtt caccaccggc accacccggc cccgcagatc
       61 caggatgccc tccacggccc ggggcatgtg cggcagcttg ttcaggtccc ggaggggcgt
      121 gatctcggcg acgtggcgga ggggaaggcc gtactgcctg ccatcgagga agaaggtcat
      181 gaaccggtgc tggacggcct ctttggcacc gccccgggcc tgcgacgggg catggccctg
      241 gcccgggctc ggggcctggt gcgaggacgc ggcgccaagg ctcacacagc ctcctgcacc
      301 gccagctgga ggagttcggc cggatccagg atcagcacca cgccgccatc gcccatgatc
      361 gaagccccgc tgatgccggg caggctggcg aggtagggcg ccaggggctt gatcaccacc
      421 tcctggcggc gcacgaaggc atccacgatg atgcccaggc ggcgccccgc cgctgagacg
      481 accaccacgg agaggccgtc cgcctcgtcc gccgggctcg tcggcgtgtt cgacttcagg
      541 aggtgcttca ggcggcagac gcccagcacc tcgccccgca ggttgatggc ctggcggctg
      601 gtgaggtgcg agatgctctc cggcggcacg atcagggtct cttccacggc ggtgccgggg
      661 agggcgaaga cctggccgcc gctcttcacc agcagcgcgt cgatgatggc gagggtcagc
      721 ggcagcttga tggtgaagat ggatcccttg cccacggtgg accggacgcc gacgcggccg
      781 ttcagcttgc gcacattgga gcgcaccacg tccatgccca cgccgcggcc cgagatgtcg
      841 gtcaccttgg cggcggtgct gaagcccggc gcgaagatca gctcgatcac ctcatcatcg
      901 gccatggcgt ccgcgcggtc ctggctcatc aggcccttct ccacggcctt ggcgcggatg
      961 accgccgggt cgatgccctt accgtcgtcc tcgatctcga cgatgacgct gtcgccttcg
     1021 tggcgcgccc ggaggatcac cgttcccact tccgacttgc cagccttcag ccgcgcctcg
     1081 ggcgcctcga tgccatggtc cgcgctgttg cggatgaggt ggatcatggg atcgccgagc
     1141 tcctcgatga tgctcttgtc gatctcggtg tcctccccgg ccatctgcag gtcgatcttc
     1201 ttgccgctgg ccttggccag gtcgcggagc atgcggggga acttcgagaa gatggtcttc
     1261 accggcacca tgcggatgcc cagcaccgag gcctggatct ccttgctgac gtggtcgagg
     1321 tagacggaag cgtgggccag ctccttggcc acggccgccg ccgggtggcc gttgacctgg
     1381 ggcacgaggc gctccaacag gtggctgatc atggtcttgc tgatgatcag ctcggccacg
     1441 atgttcatga actgctcgag cttggcctgg ctcacgcgga tggtgtcgga ggcgcccttg
     1501 tcgtcggagt tgcggcgccc ggccttgcgg cggtcctcgg cggcgggcgc gccgtcgccg
     1561 gcgccctcgg caggggccga gcccaggctc aggggatgga aggtgatggt ggcgtgggtc
     1621 accgcgccga acaccttgcg gatctcttcg atgggctcgg tggcctcgat gaccatcacc
     1681 aggtcgaggt ggaatgtcct ggggtcgaag ctgtcgaggg tcaccagggg ttcccggggg
     1741 accatctgcc ggtagagcag ccggcccacg agatccacca tctggaacat ggagaagggg
     1801 ttgaaggcgg tgccgaaaat ggcgccggcc agctcggc
//
LOCUS       DATGWW010000320         1864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_147707, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000320 DATGWW010000000
VERSION     DATGWW010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147707"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..958
                     /locus_tag="VK150_04670"
     CDS             32..958
                     /locus_tag="VK150_04670"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HLP30633.1"
                     /translation="MSKPRAVVCAYSSVGTAALEGLLEAGVEVVALYTYAQGADERWF
                     TPPAVVASAQGIPIHMVPSFNDDEVHAAIAAHRPDFLFSFYFREMIQARFLEVPRLGA
                     YNLHGSLLPKYRGRAPINWVLVKGETETGVTLHAMTPKPDDGHIIAQARLPIAWDETA
                     LSLTDKAAAAGRDLVRAAVPGLIDGSAPRIDQKTLGPSTYFGGRKPADSRLNFAMSAA
                     EAFNQVRAVADPWPNAFLETPAGSVKVAWALPSAEPCPPGRFRATGEGVLLGFTGGAL
                     RLHTLKWQSLRVERPSEQADILRSLGLEEAKA"
     gene            complement(948..1361)
                     /locus_tag="VK150_04675"
     CDS             complement(948..1361)
                     /locus_tag="VK150_04675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30634.1"
                     /translation="MKPMHVIASMVFAAASLGAQTVIIVSTKNPISKLTKEQAAQLFL
                     GQARTFITGGAAEPLDLPESSELRKDFYLKALNKAPAQMKAYWSKLEFSGSGRAPKSL
                     PTAADIVKLVGENPRYVGYVDAASVNPSVKVVLTL"
     gene            complement(1373..>1864)
                     /locus_tag="VK150_04680"
     CDS             complement(1373..>1864)
                     /locus_tag="VK150_04680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30635.1"
                     /translation="LRTLPPAFGGDPALADQFQVKRHNLTYLSVGFTVDPGGWFLMAE
                     GARKGGDEDQLLNNTGAYLTWGVRFGAWTPYLTVARKTMDSPASHPNPIVNAIISGSD
                     ESQSSYSGGLRWDMHKNIVMKAQFDRIKNGRTSHGALINPQPGFRTGESYNVTSLGLD
                     FLF"
BASE COUNT          305 a          620 c          620 g          319 t
ORIGIN      
        1 gcgatcctgg agcccatccg ggggaaagaa catgtcaaag cccagggccg tggtctgtgc
       61 ctattccagc gtgggaaccg ccgccctgga gggcctgctg gaagccggtg tggaggtcgt
      121 cgcgctgtac acctatgccc agggcgccga cgagcgctgg ttcacgccgc ccgccgtcgt
      181 ggcctcggcc cagggcatcc caatccacat ggttccctcc ttcaacgacg acgaagtgca
      241 tgcggccatc gcggcccacc gacccgattt cctcttcagc ttttatttcc gcgagatgat
      301 ccaggcccgg ttcctcgagg ttccgcggct gggcgcctac aacctccacg gcagcctgct
      361 gccgaagtac cggggccgcg cgcccatcaa ctgggtgctg gtgaagggcg aaaccgaaac
      421 tggcgtgacc ctgcacgcca tgacccccaa gcccgacgac ggccacatca tcgcccaggc
      481 ccggctgccc atcgcctggg atgagaccgc cctgagcctg acagacaagg ccgccgccgc
      541 cggcagggac ctggtccgcg ccgccgtccc cggcctgatc gatggcagcg ccccacgcat
      601 cgaccagaag acgctcggtc cctccaccta cttcggcggc cgcaaacccg ccgattcccg
      661 cctgaacttc gccatgtccg cggcggaagc cttcaaccag gtccgcgcgg tggccgatcc
      721 ttggcccaac gccttcctgg aaacaccggc gggcagcgtg aaggtcgcct gggcgctccc
      781 aagcgccgaa ccctgccccc ccgggcgctt ccgcgccacg ggggaggggg tgctgctggg
      841 gttcacgggc ggcgccttgc gcctccacac gctcaaatgg cagagcctcc gggtggagcg
      901 ccccagcgag caggcagaca tcctgcggtc gctggggctg gaggaggcta aagcgtgagg
      961 acgaccttca cgctcgggtt cacggaggcc gcgtcgacgt agccgacgta gcgggggttc
     1021 tcacccacca gttttacgat gtcggcggcc gtgggaaggg atttcggtgc ccgcccggag
     1081 cccgagaact caagcttgga ccaataggcc ttcatctgcg ccggggcctt gttcagcgcc
     1141 ttgaggtaga aatccttgcg gagctccgag gattccggca ggtcgagggg ttcagcggcc
     1201 ccgcccgtga tgaaggtgcg ggcctggccc aggaacaact gggcggcctg ctctttggtg
     1261 agtttggaaa tggggttctt ggtgctgacg attatcacgg tctgtgcccc caggctggcg
     1321 gccgcgaaca ccatgcttgc aatgacgtgc atcggtttca tggatccctc tcctagaaca
     1381 agaaatcgag gccgagggag gtgacgttgt agctctcgcc cgtcctgaag cccggctggg
     1441 gattgatcaa cgcgccatgg gaagtgcgcc cgttcttgat ccggtcgaac tgggccttca
     1501 tgacgatgtt cttgtgcatg tcccagcgga ggccgccgga atagctggac tgggattcgt
     1561 cagagcccga gatgatggcg ttcacgatgg gattcgggtg gcttgcgggc gagtccatgg
     1621 tcttgcgggc gacggtcagg tagggcgtcc aggccccgaa ccgcaccccc catgtgaggt
     1681 aggcgccggt gttgttgagc agctggtctt cgtccccgcc cttgcgcgcg ccttcggcca
     1741 tgaggaacca accgcccggg tcaacggtga accccacgct caggtaggtc aggttgtggc
     1801 gcttcacctg aaactggtcg gccagggccg ggtcgccccc gaaggccgga ggcagggtcc
     1861 gtag
//
LOCUS       DATGWW010000321         1682 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_374386, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000321 DATGWW010000000
VERSION     DATGWW010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374386"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..935)
                     /locus_tag="VK150_04685"
     CDS             complement(<1..935)
                     /locus_tag="VK150_04685"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLP30636.1"
                     /translation="MIPLSWQQRLRQQADQRLALGRNRAIHPAAGVDLCSNDYLGLRR
                     DPRLAEAAAQAARTHGAGMGAARLLRGTTPLHDELEAALADWKGTEACLLFNTGFQAN
                     ATLIPALAGQGDAVFSDALNHASLVDGCRMARAGGAHLGVFAHLDLGDLATQLAAWRG
                     SAPTGALALVASDAVFSMDGDAADLPGLLDLCERHGALLLVDEAHATGLLGCDGAGLA
                     QHQGVHGRVPLVMGTLGKALGAFGAFVCCDALLREHLVNAARGFIFSTALPPPVVGAA
                     LEGVRIARTEPWRRARALDLANRLRRALGQTDQPSA"
     gene            1154..>1682
                     /locus_tag="VK150_04690"
     CDS             1154..>1682
                     /locus_tag="VK150_04690"
                     /inference="COORDINATES: protein motif:HMM:NF013214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HLP30637.1"
                     /translation="MAALGALSAPLMASVLIPVAGRFLGWVLFGVQFGTLLFASSVSR
                     RKPLNRIAYGLFTFVSGVIAGILALVIAQGAGFLPVFMAFGLTGVVFLTLTVTAFVSK
                     KDFSFLRNFVIVGIAVMFFGGLAAAIFHLETFGLVISGVAVIACSAKLLWDTSAMLRT
                     NDFGDPAGFALALFVS"
BASE COUNT          217 a          564 c          620 g          281 t
ORIGIN      
        1 gcggagggct gatcggtctg gcccagggcc cggcgcaggc ggttcgccag gtccagggcg
       61 cgggcccgcc gccagggctc cgtccgggcg atccgcaccc cctccagggc cgctcccacc
      121 accggcggcg gcagggcggt ggagaagatg aagcctcgcg ccgcgttcac gaggtgctcg
      181 cgcagcaggg cgtcgcagca gacaaaggcc ccgaatgcgc cgagggcctt cccgagggtg
      241 cccatgacca gcggcacccg gccgtggacg ccctggtgct gcgccagccc cgcgccgtcg
      301 cagccgagca ggcctgtggc atgggcttcg tccaccagca gcagcgcgcc gtgccgttcg
      361 catagatcca acaggcccgg caggtcggcg gcgtcgccat ccatgctgaa caccgcgtcg
      421 ctggccacca gggccagggc cccggtcggc gccgaaccgc gccaggcggc gagctgggtg
      481 gccaggtcgc ccagatccag gtgcgcgaag acgccgagat gggccccgcc cgcccgggcc
      541 atgcggcagc cgtccaccag agaggcgtgg ttgagggcat cggagaacac ggcgtccccc
      601 tggccggcga gggccgggat cagggtggca ttggcctgga agccggtgtt gaagagcagg
      661 caggcttcgg tgcccttcca gtcggccagg gcggcttcga gttcgtcatg aagcggggtg
      721 gtgccccgca ggaggcgggc ggcgcccatg ccggcgccat gggtccgggc ggcctgcgcg
      781 gcggcctcgg ccaggcgggg atcccgccgc agacccaggt agtcgttgga gcagaggtcc
      841 accccggcgg ccgggtggat ggcccggttc cggcccaggg ccagccgctg gtcggcctgt
      901 tgtcgaaggc gttgctgcca ggaaaggggg atcacggggc ctcgggcggc gggatgggac
      961 cccggaactt caggggcggt catgacaggg atagggtggg gggaatgtta ggatctgaga
     1021 gggatccgag tccggatccc ttttggagcg tggcatggat ctacagcagt cctggcaggg
     1081 agcttcggag gggacgcggt cccgggttga ttttgtccga agcgtctacc tttggctcat
     1141 gggtggtttc gccgtggcgg ccctcggcgc actcagcgcc cccctgatgg cctcggttct
     1201 gattcccgtg gcaggccgct tcctgggctg ggtgctcttc ggagtccagt tcggaaccct
     1261 gttgttcgcc tcctccgtca gccggcggaa gccgctgaac cgcatcgcgt acggcctctt
     1321 caccttcgtc tcgggcgtca tcgccggcat cctggccctg gtcatcgccc agggcgcggg
     1381 tttcctcccg gtgttcatgg ccttcggcct caccggcgtg gtcttcctga ccctcacggt
     1441 cacggccttc gtgtctaaga aggacttcag cttcctgcgg aacttcgtca tcgtgggcat
     1501 cgccgtgatg ttcttcggcg gcctggcggc ggccatcttc cacctggaga ctttcggcct
     1561 ggtgatctcg ggcgtggcgg tcatcgcctg ctcggcgaag ctgctctggg atacctcggc
     1621 catgctgcgg accaacgatt tcggcgatcc cgcgggcttc gccctcgcgt tgttcgtgag
     1681 cc
//
LOCUS       DATGWW010000322         2072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_297343, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000322 DATGWW010000000
VERSION     DATGWW010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297343"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..490)
                     /locus_tag="VK150_04695"
     CDS             complement(<1..490)
                     /locus_tag="VK150_04695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30638.1"
                     /translation="MLPIRRLLLRDLLVLMAGLSALTLGLSWWSQQHALARQAEARTR
                     TALHHLGETLESELRASQSLGEVVLGWWLNGALDPANPDEAARLVLPLLSAQHGITSL
                     NLARTDGQSLLFLHLGGEWSMRELVGPGPQAHIRWRRLGRGIPPGAESWTTMDYDPRT
                     RPW"
     gene            complement(559..>2072)
                     /locus_tag="VK150_04700"
     CDS             complement(559..>2072)
                     /locus_tag="VK150_04700"
                     /inference="COORDINATES: protein motif:HMM:NF013570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alanine--tRNA ligase-related protein"
                     /protein_id="HLP30639.1"
                     /translation="FSQTLSTGLKLLEASDISAGTLAGSDIFRLYDTYGFPVDLVEDW
                     CRERGIAADLPGFQQELAAQRARARAAMKAHDLRLAGDLAVLADFPPTRFTGYDHLES
                     QAHVVALFDAKHQRVQQLSGEGYVLLDRTPFYAQSGGQVGDTGQLRFEGGHADVLDCT
                     APAQKRHLHQVKVTGTLMENTAVNALVHPIRRRRVRAHHTATHLLHAALREVLGTHVK
                     QAGSVVDENRLRFDFTHFAPLEPGQIAEIERLASRQALRSVDTQVKEMDIEEALSSGA
                     MALFGEKYGDVVRVVQVPGFSTELCGGTHVANSGEIGVVKIVSEGAVSAGVRRIEAVA
                     GEMALELLQADEAMIQGLSRQANTGREALPDLLATKDQRIAQLERDLKEAKLKAASSG
                     AAAEQVEQVKGLTLVTASVEGLEGNALRELMDQVRTRHASAVIVLASKVAEDKVAALV
                     SVSSDLPCDAGALFKAMLPALNGRGGGKKDLAQGGGSRPEGLPEAFAALRAAL"
BASE COUNT          299 a          703 c          753 g          317 t
ORIGIN      
        1 accagggccg ggtgcggggg tcgtagtcca tggtggtcca ggattcggcg ccgggcggga
       61 tcccccggcc gaggcgacgc cagcggatgt gggcctgggg accgggcccg accagctccc
      121 gcatggacca ctcgcctccc aggtgcagga aaagcagcga ttgcccatcg gtccgagcca
      181 ggttcaggct cgtgatgcca tgctgggcgg aaagaagggg cagcaccaga cgggctgcct
      241 cgtcgggatt cgcgggatcg agggcgccgt tcagccacca gcccagcacc acctccccga
      301 gggactggga cgctctcagc tcggattcga gcgtctcgcc cagatggtgg agggcggtcc
      361 gggtgcgggc ttccgcttgt cgcgccaggg cgtgctgctg gctccaccag gacagtccca
      421 gggtcagggc tgacagtccc gccatcagga ccaggaggtc ccgcagcagg agtcggcgga
      481 tgggaagcat ggtcgggagt cccccggggg ttcaggtcct tctcggtcga ggcccctccg
      541 ggcgtgatcc tgggagggtc acagggcagc gcgcagggcg gcgaaagcct cgggaaggcc
      601 ctccgggcga cttccaccgc cctgggcgag gtccttcttc ccgccgcccc ggccgttcag
      661 ggcagggagc atggccttga agagtgcgcc tgcatcgcag ggcaggtcgg aagataccga
      721 gaccagggcc gccaccttgt cttcggcaac cttggaggcg aggacgatga ccgcgctggc
      781 gtgccgggtg cggacctggt ccatgagctc gcgcagggca ttgccctcca ggccctccac
      841 ggaggcggtg accagggtga ggcccttcac ctgctccacc tgctcggcgg cggcgccgct
      901 gctggcggcc ttgagcttcg cctccttcaa gtcgcgctcg agctgggcga tgcgctggtc
      961 cttggtcgcc agcagatcgg gcagggcctc gcggcccgtg ttcgcctggc ggctgaggcc
     1021 ttggatcatg gcctcgtcgg cctgcagcag ctccagggcc atctcgccgg ccacggcctc
     1081 gatgcgccgc acgccggcgc tcaccgcacc ctcggagacg atcttcacca cgccgatctc
     1141 gccggagttg gccacgtggg tgccgccgca gagctccgtc gagaacccgg ggacctgcac
     1201 cacccgcacc acatcgccgt acttctcgcc gaatagggcc atggcgccgg aggacagcgc
     1261 ctcctcgatg tccatctcct tcacctgggt gtccacagac cgcagggcct ggcgcgaggc
     1321 cagccgctcg atctcggcaa tctgccccgg ctccaggggc gcgaagtggg taaagtcgaa
     1381 ccggagacgg ttctcgtcca ccacgctgcc cgcctgcttc acgtgggtgc cgagcacctc
     1441 gcgcagggcg gcgtggagca ggtgggtggc cgtgtggtga gcccgcacgc ggcggcggcg
     1501 gatggggtgg accagggcgt tgaccgcggt gttctccatc agcgtgccgg tcaccttgac
     1561 ctggtggaga tgccgcttct gggccggcgc ggtgcagtcc agcacgtccg cgtggccgcc
     1621 ctcgaaacgc agctggcccg tgtcaccgac ctggccgccg gactgggcgt agaagggcgt
     1681 gcggtccagc agcacgtagc cttcgccact gagctgctgg acgcgctggt gcttcgcatc
     1741 gaagagtgcc accacatgag cctggctctc aaggtggtcg tagcccgtga agcgggtggg
     1801 ggggaagtcc gccagcaccg ccaggtcgcc agcgaggcgc aggtcatggg ccttcatggc
     1861 cgcccgggct cgagcccgct gggcggccag ttcctgctgg aagcccggca ggtcggcggc
     1921 gatgccgcgc tcccggcacc agtcctccac caggtccaca gggaatccat aggtgtcgta
     1981 caggcggaag atgtcgctgc cggccagggt accggccgag atgtcgctgg cctcgaggag
     2041 cttcaggccc gtggagaggg tctggctgaa ct
//
LOCUS       DATGWW010000323         2485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_431744, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000323 DATGWW010000000
VERSION     DATGWW010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431744"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1306)
                     /locus_tag="VK150_04705"
     CDS             complement(<1..1306)
                     /locus_tag="VK150_04705"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLP30640.1"
                     /translation="MDHSPAFRLRRFMNWFPLGLTYAAMYMGRYNFNIVKNDIGAWYH
                     LDKAQMGLIASAGFWTYGLAVAFNGPLADRIGGRKAILIGSLGAALVNLAIGFMFLNG
                     DASKVLVSMSLLWSLNMYFQSFGALSVVKVNSTWFHVKERGVFGGIFGIMISSGYFLA
                     TTIGAWLLASFRSWTVIWFVPSAVMFSMFLVDWFLVRNRPSHAGHADFDTGDGSNAAS
                     AEDAPLPLRDLMKKVFHNPVIVALIFAEFCTGFVRQGVMLYFTEYLQEVYHLGKKEHL
                     FWWTGIAFMFGGILGGLLCGWMSDKLFQSRRPPVAFFFYLVQVVMLGLLGMAFGQGTT
                     GGQIWAVILLGLTAMFIFGVHGMLSGTASMDFGGRKAAASVAGALDGIQYIGSGLTGF
                     GLGWILKTYGWDGVAIHGHQPTHAWIWVGSIIPFSLIGAYIMT"
     gene            complement(1405..1965)
                     /locus_tag="VK150_04710"
     CDS             complement(1405..1965)
                     /locus_tag="VK150_04710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30641.1"
                     /translation="MRPLLLPVLALALTVTLTQACSSKLERAKAEELIRKDYPVVVTV
                     PLPDKASAEKGSAEHLRLATLKENLDKSGWFDSSVQTEGSRETFTFRLKPDAPKIIKA
                     APKGFTVPAAEAVFVRAVRMEPTREGARVAYEVRLEKPTAQFAIFQALHPEARIGQTK
                     QRHATFERRRGAWELTGTDEAFRKAD"
     gene            2066..>2485
                     /locus_tag="VK150_04715"
     CDS             2066..>2485
                     /locus_tag="VK150_04715"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLP30642.1"
                     /translation="MNPGYLAHLNHEIAQLKEAGLYKTERVITSPQQPRMQANGRDVI
                     CLCANNYLGLANHPDLIQAAKAVMDDHGFGMASVRFICGTQDIHRELEVKLAAFLGFE
                     DTQLYSSCFDANGAIFEGLLGEEDAIISDALNHASIID"
BASE COUNT          461 a          788 c          834 g          402 t
ORIGIN      
        1 gggtcatgat gtaggcgccg atgaggctga aggggatgat ggaaccgacc cagatccacg
       61 catgggttgg ctggtggcca tggattgcca caccgtccca gccataggtc ttcaggatcc
      121 accccaggcc gaaaccggtc aggcctgaac cgatgtactg gatgccatcc agggcgccgg
      181 ccacggaggc ggcggctttc cggcctccga agtccatgct ggccgtgccg ctgagcatgc
      241 cgtgcacccc gaagatgaac atggccgtga ggcccaggag gatcacggcc cagatctgcc
      301 cgcctgtggt gccctggccg aaggccatgc cgaggagacc gagcatcacc acctgcacca
      361 ggtagaagaa gaaggccacg gggggccggc gggactggaa cagcttgtcg ctcatccagc
      421 cgcagaggag gccgccgagg atgccgccga acatgaaggc gatgcccgtc caccagaaca
      481 ggtgctcctt cttgcccagg tggtagacct cctgcaggta ttcggtgaaa tagagcatca
      541 cgccctggcg cacgaagccc gtgcagaatt ccgcgaagat cagggccacg atcaccgggt
      601 tgtggaagac cttcttcatg aggtcgcgca ggggcagggg ggcgtcctcg gcggaggcgg
      661 cattggagcc gtcccccgtg tcgaaatccg cgtgccccgc gtggcttggg cggttgcgca
      721 ccaggaacca gtccaccagg aacatgctga acatcacggc ggacggcacg aaccagatca
      781 cggtccagct gcggaagctg gccagcagcc aggcgccgat ggtggtggcc aggaaatacc
      841 cggagctgat catgatcccg aagatgccgc cgaagacgcc gcgttccttc acgtggaacc
      901 aggtgctgtt gaccttcacg acggagaggg ccccgaagct ctggaagtac atgttcaggc
      961 tccagagcag gctcatgctc acgagcactt tcgaggcgtc gccattgagg aacatgaacc
     1021 cgatggccag gttcaccagg gcggcgccga gggaaccgat gaggatggct ttgcggccgc
     1081 cgatccgatc cgccaggggg ccgttgaagg ccacggccag gccgtaggtc cagaagcccg
     1141 ccgaggcgat gagtcccatc tgggccttgt ctaggtggta ccaggcgccg atgtcgttct
     1201 tcacgatgtt gaagttgtaa cggcccatgt acatggccgc gtaggtcagc cccaggggga
     1261 accagttcat gaaccggcgc agacggaagg cagggctgtg atccaaggca acctcgatgg
     1321 ctcaagggta ctggacgggc ctgggtcccc caagtaacga gggtgtaact ccggtcaagt
     1381 cccacccgcg gtcgagggtg gggatcagtc ggccttgcgg aaggcctcgt ccgtgccggt
     1441 cagctcccaa gcgccgcggc ggcgctcgaa ggtggcgtgg cgctgcttgg tctggccgat
     1501 gcgtgcctcg gggtgcaggg cctggaagat cgcgaactgg gccgtgggct tctccaggcg
     1561 gacctcgtag gccacgcggg cgccctcccg ggtgggctcc atgcgcacgg cgcggacgaa
     1621 caccgcctcg gcggccggca cggtgaagcc cttgggggcg gccttgatga tcttcggggc
     1681 gtccggcttc aggcggaagg tgaaggtctc gcggctgccc tcggtctgga cgctgctgtc
     1741 aaaccagccg ctcttgtcga ggttctcctt cagtgtcgcc agacgcaggt gctcagcgct
     1801 gcccttctcg gccgaagcct tgtccggcag gggcacggtc accaccacgg ggtagtcctt
     1861 gcggatcagc tcctcggcct tggcgcgctc cagcttggag ctgcaggcct gtgtgagggt
     1921 cacggtgagg gcgagggcga ggacgggcag gagcagaggg cgcatggtcg gatcctttcc
     1981 acttcgcaag gatggtgaca caactccatg cggctcattc aaccccgcag tatcctatgg
     2041 agcctctgat gataggagaa ccgccgtgaa ccctggctac ctggcccacc tcaaccacga
     2101 gatcgcgcag ttgaaggagg ccggcctcta caagaccgag cgggtcatca cgtcccccca
     2161 gcaaccccgg atgcaggcca acggccggga tgtcatctgc ctctgcgcga acaactacct
     2221 gggcctggcc aaccacccgg acctgatcca ggccgccaag gcggtcatgg acgaccacgg
     2281 cttcggcatg gcctccgtgc gcttcatctg cggcacccag gacatccacc gggagctgga
     2341 agtcaagctg gcggccttcc tcgggttcga ggacacccag ctctattcct cgtgcttcga
     2401 cgccaacggc gccatcttcg aggggctcct gggcgaggag gacgccatca tcagcgacgc
     2461 cctgaaccac gcttccatca ttgac
//
LOCUS       DATGWW010000324         2685 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_297411, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000324 DATGWW010000000
VERSION     DATGWW010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297411"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            52..987
                     /locus_tag="VK150_04720"
     CDS             52..987
                     /locus_tag="VK150_04720"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HLP30643.1"
                     /translation="MEVWHHALEAAPVAGPYVVTLGTFDGVHAGHRELLQLAAGRAKA
                     LGRQAAVVTFDPHPTVVVAPQRRPKLLMTLDQRLAAFRTEGMDLAWVIPFSRAFSELE
                     PGVFLDRMAQSLAPVELHVGKAFCFGRDRTGTVETLAAWGPAHGCEVHTLALRAPDGG
                     RLSSTRIRETLDRGEVESARDLLGHPYTLTGVVVEGDRRGRHLGFPTANLAWEQEQLP
                     ASGVYVTEASLPHHGGTFLGLTNVGEKPTFEGQRLTVETHLPGFEGDIYGARLEVRFL
                     HRIRGEKKFSSVDELRAQIAQDVAEGQAWWKGRRG"
     gene            complement(1002..1202)
                     /locus_tag="VK150_04725"
     CDS             complement(1002..1202)
                     /locus_tag="VK150_04725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30644.1"
                     /translation="MRTPLRGFGYKLSGYFMEYGPIEADSLDSAKAQIRRRLGVSRLP
                     LGIQIWDLTERPLTRWRVDVAS"
     gene            complement(1335..2132)
                     /locus_tag="VK150_04730"
     CDS             complement(1335..2132)
                     /locus_tag="VK150_04730"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HLP30645.1"
                     /translation="MTAAPPRPHPARLLPMRIQHALLTVLLLAVGAFSGEAGVPPASP
                     APRIIALTQALMDSIVSGDGRVWDRILHQDATVVDEFGRRQTKTEAVQALKPLPAGFS
                     GSIEVRHPRVHVQGATAMIEFEAYEQEQVFDQQLVVRYHFMATYLRAGRDWKLFAMQN
                     LTLPDDPPALPVRDLRLDDYPGTYRYGPGRAFTIRRKDDHLCFTARAGGPEWPLNPVA
                     TDVFFDMGEEKNLLIFQRDASGRVFRLIQRRKFNDLTMTRLEPGQSP"
     gene            complement(2251..2511)
                     /locus_tag="VK150_04735"
     CDS             complement(2251..2511)
                     /locus_tag="VK150_04735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30646.1"
                     /translation="MRRLVLLALVALAAFPLSAHGRWHRPRRVVVVEAPCRPTRGWEY
                     DRWEHRDRGWYRRPACDDDRVYLRPVRPLEPPFQGRVEFWIH"
BASE COUNT          430 a          856 c          998 g          401 t
ORIGIN      
        1 cagcgtggtg gccagcctcg cctggcccgc ggagcaggac ggagtcggct gatggaggtc
       61 tggcatcacg cgctggaggc cgcgccggtg gcggggccct atgtggtcac cctgggcacc
      121 ttcgatggcg ttcatgcggg ccaccgggag ctgctgcagt tggcggcggg gcgggcgaaa
      181 gccctgggcc gccaggccgc cgtggtgacc ttcgaccccc accccaccgt tgtggtggcg
      241 ccccagcgcc gaccgaagct gctgatgacc ctcgaccagc gcctggcggc cttccggacc
      301 gagggcatgg acctagcgtg ggtgatcccc ttcagccgcg ccttctcgga actggaaccc
      361 ggggtcttcc tggaccgcat ggctcagtcc ctggccccgg tggagctgca cgtgggcaag
      421 gccttctgct tcggccgcga ccggacaggc accgtggaga ccctggcggc ctggggaccg
      481 gcccacggct gcgaggtgca caccctggcc ctgcgggccc ccgacggcgg gcgcctctcc
      541 agcacccgca tccgcgaaac cctggaccgc ggcgaggtgg agtcggcccg ggacctgctg
      601 ggccacccct acaccctcac cggcgtggtg gtggagggag atcgccgggg ccgccacctg
      661 ggctttccca cggcgaacct ggcctgggag caggagcagc tccccgcctc cggcgtgtat
      721 gtgaccgagg cgagcctccc ccaccatggg ggcaccttcc tggggctcac caacgtgggt
      781 gagaagccca cctttgaagg gcagcggctc acggtggaga cccacctgcc gggcttcgag
      841 ggcgacatct acggcgcccg cctggaggtt cgcttcctcc accgcatccg gggcgagaag
      901 aagttcagct ccgtggacga actgagggcc cagatcgccc aggatgtggc cgagggacag
      961 gcttggtgga aggggcggcg aggctgaaga gcttcagtgc ctcagctggc gacgtccacc
     1021 cgccaccggg tgaggggccg ctccgtcagg tcccagatct ggatgccgag gggcagccgg
     1081 ctcacgccca ggcggcggcg aatctgggcc ttggccgagt ccaggctgtc ggcctcgatg
     1141 gggccgtatt ccatgaagta gccactgagc ttgtagccga aaccgcgaag gggtgtccgc
     1201 atgggggctc cgtttgtccc gttctttcaa tattcgtctt ttattcgcct tgtgtcaagc
     1261 ccaaaggcga aaaatgaggg acataccaag cttcagcgga cgggctggac aacggctgtc
     1321 caatcccgcc ccgctcaggg gctctggccg ggctcaagcc gggtcatggt gaggtcattg
     1381 aatttccgcc gctggatcag gcgaaagacc ctccctgaag cgtcccgctg gaagatgagc
     1441 aggttcttct cctcgcccat gtcgaagaag acatccgtcg ccaccgggtt caggggccac
     1501 tcgggccctc cggctcgggc ggtgaagcac aggtggtcgt ctttccggcg gatggtgaag
     1561 gcccggcccg gaccgtagcg gtaggtccct gggtagtcgt cgagccggag gtcgcggacg
     1621 ggcagggccg gtgggtcatc gggcagggtc aggttctgca tggcgaacag cttccagtcc
     1681 cggccggccc ggaggtaggt ggccatgaag tggtagcgga ccacgagctg ctggtcgaac
     1741 acctgctcct gttcgtaggc ctcgaattcg atcatggcgg tggcgccctg gacatggacg
     1801 cgcggatggc gcacctcgat ggagccggaa aacccggccg ggaggggctt gagggcctgg
     1861 accgcctcgg tcttggtctg ccggcggccg aactcgtcga ccaccgtcgc gtcctggtgg
     1921 aggatgcgat cccacacgcg gccatcgccc gagacgatgg aatccatcag cgcctgggtg
     1981 agggcgatga ttcgcggggc cggggaggcg ggcggaacac ctgcctcccc ggagaacgcc
     2041 ccgacagcca ggagaagcac agtcaggagc gcatgctgga ttcgcatggg gaggagacgg
     2101 gcggggtgcg gtcggggcgg ggcggcggtc atggggactc ctgggcaggg cgcaatgggc
     2161 gcatcagcgt gcccgagcgc cacccggagg tggaggtcgg ccgggcccag cctgggagcc
     2221 cctggtccca ggggtctgga tcagccaggt tcagtggatc cagaactcga cgcggccctg
     2281 gaagggcggc tcgagggggc gaaccggccg gaggtagacg cggtcgtcgt cgcaggcggg
     2341 ccgacggtac cagccgcggt cccggtgctc ccagcgatcg tattcccagc cgcgggtggg
     2401 ccggcagggc gcttcgacca ccacgacccg gcggggacga tgccagcggc catgggcgga
     2461 cagggggaag gctgcgaggg cgacgagggc gagcaggacc aggcggcgca tgggacctcc
     2521 ttcacggaag gggtgaagca ccccgagaag gcctgttcaa aggttgtgcc agagtacaaa
     2581 aacatgttct ggctttagtt aggaacccgg gcccaggcgg cgattcgcga attgcaacgg
     2641 gcgctgcgcg ccatgtggca agggacgacg aagcgcgcag tccta
//
LOCUS       DATGWW010000325         1785 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_297447, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000325 DATGWW010000000
VERSION     DATGWW010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1785
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297447"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..620
                     /locus_tag="VK150_04740"
     CDS             <1..620
                     /locus_tag="VK150_04740"
                     /inference="COORDINATES: protein motif:HMM:NF037386.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30647.1"
                     /translation="YLDMPLQHADAAILKAMARGGSRTQFLKLLEKVRRIVPGIAIRS
                     NFIVGFPGEDEAAFEELKAFVKEARFDHVGVFTYSPEEGTSAYASGDPIPKRTKEARK
                     RRILELQQKIAREKNQEKVGQVIDVLVEGAHEETDLIVKGRHAGQAPEIDGNVLLVDG
                     TPQVNTIQRVRIVKAHAYDLIGEVEEGGLEASTAAYEAAFRARKG"
     gene            695..>1785
                     /locus_tag="VK150_04745"
     CDS             695..>1785
                     /locus_tag="VK150_04745"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HLP30648.1"
                     /translation="MRLPATVFACLPILASQSPNPPHLQIPRLPQAPSMAWDADLSTW
                     AGAATIQEFGLFMPDDKGQNQWPTVVHAAWGPDALYIAIEATDPEPSKIHVARHMRDT
                     NQGDFDFVGIDLDPSGKGQSALRLFVTPLGGQIDEILTDSTGENASYDCLWDSTGVLT
                     PTGYVVKMRIPYSSLRRRPGDWGLRVLRIIPRERRFGIAWPPMSKDIQCDICQMARVS
                     GAPVDHPGSPFLLIPFATFNRTRNLEADPNAPARSQSRLGMDLRYATTALTLEGTYRP
                     DFATADADVDPLQINSRFKVFYPERRPFFLEGMDLLGVQGAQRQFFSRSVQNPLYGVK
                     ASGQASLASWTVLHAKDTDGGMLLGANGAV"
BASE COUNT          308 a          665 c          560 g          252 t
ORIGIN      
        1 gctacctgga catgcccctc cagcacgcgg acgccgccat cctcaaggcc atggcccggg
       61 gcggcagccg cacccagttc ctgaagctgc tcgagaaggt gcgccgcatc gtgccgggca
      121 tcgccatccg ctcgaacttc atcgtgggct tcccgggcga ggacgaagcc gccttcgagg
      181 agctgaaggc cttcgtgaag gaggcccgct tcgaccacgt gggcgtgttc acctacagcc
      241 ccgaggaggg cacctcagcc tatgcctcgg gcgatcccat ccccaagcgc accaaggagg
      301 cccgcaagcg gcgcatcctc gagctccagc agaagatcgc ccgggagaag aaccaggaga
      361 aggtgggcca ggtcatcgac gtgctggtgg agggcgctca cgaggagacc gacctcatcg
      421 tgaagggccg ccacgccggc caggcccccg agatcgacgg caacgtgctg ctggtggacg
      481 gcacccccca ggtgaacacc atccagcggg tgcgcatcgt gaaagcccac gcctatgacc
      541 tcatcggcga agtcgaggag ggcgggctgg aagccagcac ggcggcctat gaggcggcct
      601 tccgggcccg caagggctga aacctgacct gaggggctaa acgggggtgc gaaagtcctc
      661 gtaggcgagg ggtccagcca cctggggatc tttcatgcgc ctgccagcca cggttttcgc
      721 ctgcctgccc atcctggcct cgcagtcacc caatccaccc cacctgcaga tcccccgcct
      781 cccccaggcg ccctccatgg cctgggacgc ggacctgtcc acctgggccg gggccgcgac
      841 gatccaggag ttcggcctct tcatgcccga cgacaagggg cagaaccagt ggcccaccgt
      901 ggtccacgcg gcctggggac ccgatgccct ctacatcgcc atcgaggcca ccgaccccga
      961 gccctcgaag atccacgtgg cccgccacat gcgggacacc aaccagggcg acttcgactt
     1021 cgtgggcatc gacctggacc cttcaggcaa agggcagagc gccctgcggc tcttcgtgac
     1081 gcccctcggg ggtcagatcg acgagatcct caccgacagc accggcgaga acgcctcgta
     1141 cgattgcctg tgggattcca ccggagtgct cacccccacc ggctacgtgg tgaagatgcg
     1201 catcccctac agcagcctgc ggcgacgccc cggcgactgg ggcctgcggg tgctgcgcat
     1261 catcccccgg gagcgccgct tcggcatcgc ctggccgccc atgagcaagg acatccagtg
     1321 cgacatctgc cagatggcgc gggtctcggg cgcgcccgtg gaccatccgg gatcgccgtt
     1381 cctgctcatc cccttcgcca ccttcaaccg cacccggaac ctggaggcag atcccaacgc
     1441 cccggcccgg agccagtcgc ggctgggcat ggacctgcgc tacgccacca ccgccctcac
     1501 cctggagggc acctaccggc ccgacttcgc cacggccgac gccgacgtgg atccgctgca
     1561 gatcaacagc cgcttcaagg tgttctaccc cgagcggcgc cccttcttcc tggagggcat
     1621 ggacctcctg ggcgtgcagg gggcccagcg ccaattcttc agccgctccg tccagaaccc
     1681 cctctacggc gtgaaggctt ccggccaggc ctcgctcgcc agctggaccg tgctccacgc
     1741 caaggacacc gatggcggga tgctgctggg tgccaacggc gccgt
//
LOCUS       DATGWW010000326         2894 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_337289, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000326 DATGWW010000000
VERSION     DATGWW010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2894
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337289"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..426)
                     /locus_tag="VK150_04750"
     CDS             complement(<1..426)
                     /locus_tag="VK150_04750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30649.1"
                     /translation="MARKKPRAPLTPSLYANPGTLLFHVDPYNAWRKMRGHSEHSLKR
                     DTHTVLRFIRFCEERGVHSPHEVTRAFLERYQKHLSRCTTSKGKDLSIHAQLNYILSV
                     RGFFRFLAKERLIPFNPAAELDLPRVGKRLPRHVLTAEEA"
     gene            complement(433..>2894)
                     /locus_tag="VK150_04755"
     CDS             complement(433..>2894)
                     /locus_tag="VK150_04755"
                     /inference="COORDINATES: protein motif:HMM:NF024755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HLP30650.1"
                     /translation="EHLAGSLVVPILDAAGNTLSLYGRKLLDTLRAGTPSHLYLPGPH
                     RGVFNIGGLQGPEIILCESLLDALSFWVHGFQHVTTSYGVEGFTEEILAALKASGASL
                     ISIAYDRDEAGDKAAEKLGKRLRAEGFGCRRVRFPHGMDANDYIRRMKPAQTALKLLL
                     DTAVSMDKDGKLKAPPVPARETEAPPVLDAPVAPAPSLVAPPEPPPAAPGVAPTPAPV
                     PEVSPAPKPTTAEVRGEDVFLAFGERAYRVRGLFKNLTHDHLKVNLRAAVGERFFLDQ
                     LDLYNARHRETFVQNAAVELEQKQEVLKKDLGKMLVELERLQDEAIRETLAVEDAVPL
                     MPEAERREALALLQDPDLVGRILRDFEALGVVGESMNKLTAYLACVSRKMERPLGLLI
                     QSTSAAGKTALMDAVIGLLPPEEYVRYSAMTAQSLYYMDSRGLKHKVLCICEEEGAER
                     ASYALKLLQSDGRLTIAAAGKDEKTGKLLTQEYSVEGPVAVLLSTTSVNVDEELQNRC
                     LTLTVDESREQTQRIHAAQRERETVEGLLRKERGDKLIRLHQNAQRLLRPLKVANNHA
                     PYLTFVDGQTRTRRDHVKYLTLIRAVTLLHQYQRPVKMKDGVEYIETTLEDIALANRL
                     AHQVLGRTLDELPPQTRNLLSLLERLVKTEAKAQGLRPSEVRFTRRQAREWSGWGHSQ
                     VALHLSRLEEMEYLLPCRGRNGSRYEYELTYQGEGREGEPFLPGLVDVQALKKTGGQH
                     FDSDLPGVNDNLPGRFRGASGPLPGGIRDGANGSEPKSDGLSMANGASEGGKEDGGDI
                     SRAHRSPLHPRSKASFSLVAP"
BASE COUNT          459 a          906 c         1024 g          505 t
ORIGIN      
        1 ggcctcctcg gcggtcaaca catgccgcgg gagccgcttc cccacccggg gcaggtcgag
       61 ttcggcggcg ggattgaagg ggatcagcct ctccttggcc aggaagcgga agaaaccccg
      121 cacggacagg atgtaattga gctgggcgtg gatggagaga tccttcccct tcgaggtggt
      181 gcagcggctc aggtgcttct ggtagcgctc caggaaggcg cgggtgacct cgtggggact
      241 gtggacccca cgctcctcgc agaagcggat gaagcgcagc acggtatgcg tatcccgttt
      301 gagcgagtgc tcgctgtggc cgcgcatctt ccgccaagcg ttgtaggggt ccacgtggaa
      361 aagaagcgtc cccgggttgg cgtacaggga cggcgtgagc ggcgcgcggg gcttcttccg
      421 ggccatgagc agctacggag cgaccaagga gaaagaggct ttggatcttg gatgaagagg
      481 acttcgatgg gcgcgggaaa tgtccccccc atcctctttt ccaccctcgg aagcgccgtt
      541 tgccatggag agcccgtcac tcttgggctc ggagccattc gccccatccc ggatcccccc
      601 cggaaggggg ccggaagcac cccggaagcg ccccggaagg ttgtcgttca cccccggaag
      661 gtccgaatca aagtgttgcc cacccgtctt cttgagggcc tgcacatcca ccaaccccgg
      721 caagaagggc tcgccttccc ggccctcgcc ttgataggtc agctcgtact cgtagcggga
      781 cccgttccgc ccccggcagg gaaggagata ttccatttcc tccaggcggg agaggtgcaa
      841 ggcaacctgg ctatggcccc agcctgacca ctcccgggcc tgtcggcgag tgaagcgcac
      901 ctcggagggg cgaagaccct gggccttcgc ctcggtcttc acgagccgct ccaggaggct
      961 gaggagattc cgggtctgcg gtgggagctc gtccagggtg cggccgagga cctggtgggc
     1021 gagccggttg gccagggcga tatcctccaa ggtggtctcg atgtactcca cgccatcctt
     1081 catcttgacc ggccgctggt actggtggag caaggtcacc gcgcggatga gggtcaggta
     1141 cttcacatgg tcgcggcggg tccgggtctg gccgtccacg aaggtgagat acggcgcgtg
     1201 gttgttggcc accttgagcg gccgcaggag ccgctgggcg ttctggtgca ggcggatgag
     1261 cttgtcgccg cgctccttcc gcaagaggcc ctccaccgtc tcccgctcgc gctgggcggc
     1321 gtggatgcgc tgggtctgct cccggctctc gtccaccgtc aaggtcaggc agcggttttg
     1381 cagttcctcg tccacgttga ccgaggtggt ggagaggagc accgcgaccg gcccctccac
     1441 gctgtattcc tgggtcagga gcttccccgt cttctcgtcc ttgccggcgg cggcgatggt
     1501 caatcggccg tcgctttgca ggagcttcaa ggcataggac gcccgctccg cgccctcctc
     1561 ctcgcagatg caaaggacct tgtgcttgag gccccgcgaa tccatgtagt agaggctctg
     1621 ggccgtcatg gcgctgtagc ggacgtactc ctcgggtggg agcaggccta tcaccgcatc
     1681 catcagcgcc gtcttgccgg cggcggaggt gctttggatg aggaggccga gaggcctctc
     1741 catcttgcgc gacacgcagg cgaggtaggc ggtgagcttg ttcatggact cacccactac
     1801 ccccagggcc tcgaagtccc gcaagatacg gccgaccagg tcgggatcct gaaggagggc
     1861 gagggcctcc cgccgttcgg cctccggcat gagcggcacg gcgtcctcga cggccagggt
     1921 ctcgcggata gcctcgtcct gcaggcgctc gagctcgacg agcattttgc cgaggtcctt
     1981 ctttaaaacc tcctgctttt gctccagctc cacggcggcg ttttgcacga aggtctcgcg
     2041 atggcgggca ttgtagaggt cgagctggtc gaggaagaag cgttcgccca cggcggcgcg
     2101 gaggttgacc ttcaagtgat catgggtcag gttcttgaag aggccgcgga cccgataggc
     2161 ccgttcgccg aaggcgagga aaacgtcctc gccccggacc tcggcggtag tgggcttcgg
     2221 ggccggcgac acttccggca cgggtgccgg cgttggagcc acccccggag cggccggcgg
     2281 cggctccggg ggagcgacca aggaaggagc gggcgcgacg ggagcgtcca ggaccggcgg
     2341 ggcttccgtc tcgcgcgccg gcacgggcgg ggccttgagc ttcccgtcct tgtccatcga
     2401 gacggcggtg tcgagcagga gcttcaaggc cgtctgcgcc ggcttcatcc gacggatata
     2461 gtcgttggcg tccatgccat gcgggaagcg gacacggcga caaccgaagc cctcggcgcg
     2521 gaggcgcttc ccgagcttct ccgccgcctt gtcgccggct tcgtcgcggt cgtaggcgat
     2581 ggagatgagg gacgcgcccg aggccttgag ggcggccagg atctcctccg tgaagccctc
     2641 gaccccgtag gacgtggtga catgctggaa gccgtggacc cagaaggaga gcgcgtcgag
     2701 gaggctttcg cagaggatga tttccgggcc ctggagcccg ccgatattga acaccccgcg
     2761 gtgcgggccc gggaggtaga ggtgggacgg cgtgccggcg cgcagggtgt ccaggagctt
     2821 gcggccatag aggctcaagg tattcccggc ggcgtcgaga atgggcacga ccagggaccc
     2881 ggcgaggtgt tcgt
//
LOCUS       DATGWW010000327         2155 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_108791, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000327 DATGWW010000000
VERSION     DATGWW010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2155
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108791"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VK150_04760"
     CDS             <1..282
                     /locus_tag="VK150_04760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30651.1"
                     /translation="DRWPKATLKLVLFSNRKYALYRNEVPEPLVRDWKSHYLAEYDAE
                     KKKLTIFPALPARRKTLVLDLCPDAKVVSAKFYRYHCQITNPGKSPSLE"
     gene            complement(531..1127)
                     /locus_tag="VK150_04765"
     CDS             complement(531..1127)
                     /locus_tag="VK150_04765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30652.1"
                     /translation="MLRNIARFIAGSFVTILLAFTAGCSLKPHAAADLPDPPPLGLEL
                     RLASLDIRDIRQGIGPLEEPSLSRAGGFARSKTLDSADRDALRAQVERDMTGTGLPLH
                     LDITVERAEVGWHGKWILRATEQGRFHVRIAFRHGTTRLAECSGSATLERPNIHATRD
                     SLGRLFRYGLVASIHQCLEATREELKKAPQEPSGTAPI"
     gene            complement(1247..>2155)
                     /locus_tag="VK150_04770"
     CDS             complement(1247..>2155)
                     /locus_tag="VK150_04770"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLP30653.1"
                     /translation="NVMVRLDPETREAFSGLDRITVPHEGARIPLSSLARITQGASLA
                     KINHLDGNRAIQVWADLAPGVNDQGPPKAAAAQIVAGMKTPAGYRIQAGSSNREEEET
                     TAFLGKAFFIAVALVFLTMVAQFNSVLQPFLVLIGILLSVGGVFWGLLIVHTQFAIMM
                     TGIGIIALAGVVAKNGIVLIDFINHLRREGLPLYQAVIEGGATRLRPVLLTAITAMIG
                     LLPMATGKGFDFMNLHIELKSESSLWWAPMAWGIFWGLLFNTLLVLVVVPTFYYAWER
                     RKEKSGWGINRGHEEEVRPPAPIQVH"
BASE COUNT          407 a          626 c          741 g          381 t
ORIGIN      
        1 gaccggtggc ccaaggcaac cttgaagcta gtactatttt cgaacaggaa atacgcgctt
       61 tacagaaatg aagtccctga gcctctggtt cgggattgga aaagccatta cctagccgaa
      121 tatgatgctg aaaagaagaa actgacaatt tttccagccc tacctgcgag acgtaaaact
      181 ttggttttgg atctctgtcc ggatgcgaaa gtggtttcgg ctaagttcta ccgctatcac
      241 tgccagatca caaaccctgg aaaatctcca agcctcgaat aaactccttt tgaagaatgg
      301 tagagcgtct ttcggcgctg aagcttcaaa gtgggcggcc gggaactaca aattctccat
      361 tcatttcttc gtgtgcgggg gtaatacgaa gcgggggaag cctaccagac ccatggcatg
      421 ctgtttcggg atagattagt cacccactcc tctcaagtcc tcacctatcg cgcatcccat
      481 cccaagccag ctcaggctgg ggaaacgaag gaggaaccgc tcgccaaggt tcagatgggc
      541 gcggtccccg atggctcttg cggagccttc ttgagctcct ccctggtggc ctccaggcat
      601 tggtgaatgc tcgcgacgag gccgtaccgg aatagccttc cgaggctgtc ccgcgtggca
      661 tggatattgg gccgctccag ggtggctgat ccgctgcatt cggcgagcct ggtcgttcca
      721 tgccggaagg cgatgcgcac gtggaagcgg ccctgttcgg tggcgcggag aatccatttg
      781 ccatgccatc ccacctcggc gcgctccacg gtgatatcga gatgcagggg cagcccggtg
      841 ccggtcatgt cacgttccac ctgggcgcgc agggcgtcgc ggtcggcgct gtccagggtc
      901 ttggagcggg cgaagccgcc ggcgcgagac agggagggtt cctccagggg gccgatgcct
      961 tgccggatgt cgcggatgtc cagggaggcg aggcggagtt caaggcctag gggcggcggg
     1021 tcagggaggt cggcggcggc gtggggctta agggagcagc ccgcggtgaa agcgagcagg
     1081 atggtgacga agctgccggc gatgaagcgg gcgatgttcc tgagcattgt ccctcccacg
     1141 tgctacccgc gggaaaggta accggcccgc gacggagcgc caagccggaa gggatggccg
     1201 ccaggaaggc ctggccgccg gcccgccggc ccgggcggcc cggacttcag tggacctgga
     1261 tgggggcggg aggccggact tcttcctcgt ggccgcggtt aatgccccag ccgcttttct
     1321 ccttgcgcct ctcccaggcg tagtagaagg tgggcacgac caccagcacc agcagggtgt
     1381 tgaagagcag gccccagaag atgccccacg ccatgggggc ccaccagagg gacgactcgg
     1441 acttcaattc gatgtggagg ttcatgaagt cgaagccctt gccggtggcc atgggcagca
     1501 ggcctatcat ggccgtgatg gcggtgagaa gcacgggccg gaggcgggtg gcgccgccct
     1561 cgatgaccgc ctgatagagg ggcagcccct cacggcgcag atggttgatg aagtcgatga
     1621 gcacgatgcc gttcttcgcc accacgcccg cgagagcgat gatgccgatg ccggtcatca
     1681 tgatggcgaa ctgggtatgc acgatgagca gaccccagaa cacgccgccg accgacagga
     1741 gaatgcctat cagcaccagg aagggctgca gcacggagtt gaactgggcc accatggtga
     1801 ggaacacgag ggccaccgcg atgaagaagg ccttgccgag gaaggccgtg gtctcctcct
     1861 cctcgcggtt gctgctgccc gcctggatgc ggtagccggc cggcgtcttc atgccggcca
     1921 ctatctgggc ggcggcggcc ttgggcggac cctggtcgtt cacgcccggg gcgaggtcgg
     1981 cccagacctg gatggcgcgg ttgccgtcga ggtggttgat cttggcgagg ctggcgccct
     2041 gggtgatgcg cgccaaggag gagagcggaa tgcgcgcgcc ctcgtggggc acggtgatgc
     2101 ggtcaagccc ggagaaggcc tcgcgggtct cggggtcgag gcgcaccatc acgtt
//
LOCUS       DATGWW010000328         1851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_297943, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000328 DATGWW010000000
VERSION     DATGWW010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297943"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            13..1146
                     /locus_tag="VK150_04775"
     CDS             13..1146
                     /locus_tag="VK150_04775"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HLP30654.1"
                     /translation="MTAFHLPASARSAVLAAGTLLALQACRSQPSAETAQAQAGPRAP
                     EVDAVPLKSIHEGLQLLDAPAPAVLQGWFPAEAAGDESARAVLTAPVSGIVAAAPAAP
                     GRPVAKGAPLVTLRSPELADLKSKWLIAQARLRRAQAELAREQRLAVAQAGARRDLES
                     AEAEHAGASAEAEYARIALQARGVTPEQADGTFVLRAPSAGTVSAWKAQLGQGVSAHE
                     ELGAFQAASASLALADLPPPAPAEWKLGARTAVREDGRTWQGEVVGLPSSMGDMTHRL
                     TYRLRLSGAPLPLPGTPLEVQVPLGRGTLLPSSALQQVDGVWGVFLKDGELARFRPVK
                     RGPDVGRETLVADGLPAGAKVFTEGAFLLKSKLMRLRSGGGDE"
     gene            1139..>1851
                     /locus_tag="VK150_04780"
     CDS             1139..>1851
                     /locus_tag="VK150_04780"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLP30655.1"
                     /translation="MSKPAHALLTRWFAWLLPKQGLVYGATLLLAFTGTLTFFSLKRD
                     LIPDLSLPSLQLLIQSPGRAASELELTVAQPVEQAVGGLPGVRRVVSTVQAGLVQVVI
                     AFDGDTDPWRSRQLVGERISSLMGGFPPGTLPPLVTSAAGRLQEIQELVLTGPGIGPV
                     AIRDHAVKVIVPRLQAVAGVARVEALGGEARQIQVLLRPDRMRLLGVPLGKAMEALEG
                     SDQDGGAGILELQDKGWFVT"
BASE COUNT          223 a          719 c          666 g          243 t
ORIGIN      
        1 tggagatgcc cgatgaccgc cttccacctg cccgcttccg cccgttccgc cgtcctggcg
       61 gcggggacgc tcctcgccct ccaggcctgc agatcccagc cgtcagctga gaccgcccag
      121 gcccaggccg gcccccgggc ccccgaggtc gacgccgtgc ccctgaagag catccacgag
      181 ggcctgcagc tcctggacgc ccccgcgccg gcggtgctgc agggctggtt ccccgccgag
      241 gccgcggggg atgagtcggc ccgcgcggtc ctcaccgccc ccgtgagcgg catcgtggcc
      301 gcggccccgg ccgcgccggg ccgccccgtc gccaagggcg cgcccctggt gaccctgcgg
      361 agcccggagc tggccgacct caagtcgaag tggctcatcg cccaggcccg gctgcgccgc
      421 gcgcaggcgg agctggctcg ggagcaacgc ctcgccgtcg cccaggccgg cgcccggcgc
      481 gacctggaga gcgccgaggc ggagcacgcc ggcgccagcg ccgaggcgga atacgctcgc
      541 atcgccctgc aggcccgggg cgtcaccccg gagcaggccg acggcacctt cgtgctgcgc
      601 gctcccagcg ccggcaccgt gtccgcctgg aaggcccagc tgggccaggg cgtgtcggcc
      661 cacgaggagc tgggcgcctt ccaggccgcc tccgcctcgc tggccctcgc ggatctgccg
      721 ccgccggccc ccgccgagtg gaagctgggc gcccggacgg cggtccgcga agatggccgc
      781 acctggcagg gcgaggtggt gggcctgccc tccagcatgg gcgacatgac ccatcggctc
      841 acgtaccggc tgcgcctcag cggcgccccg ctgcccctgc cggggacgcc cctggaggtc
      901 caggtgcccc tgggccgcgg gaccctcctg ccctcctccg cgctccagca ggtggacggc
      961 gtgtggggcg tgttcctgaa ggatggtgag ctcgcccgct tccgccctgt gaagcgggga
     1021 ccggacgtgg gccgcgaaac cctagtggca gacggcctgc ccgcaggcgc caaggtgttc
     1081 accgaaggcg ccttcctcct caagtcgaag ttgatgcgcc tccggtcggg aggcggcgat
     1141 gagtaagccg gcccacgccc tgctcacccg ctggttcgcc tggctcctgc ccaagcaggg
     1201 cctggtctac ggcgccaccc tgctgctggc cttcaccggc acgctcacct tcttcagcct
     1261 caagcgcgac ctcatccccg atctgtccct gccctcgctc cagctgctca tccagagccc
     1321 tgggcgcgcg gcctcggaac tggagctcac cgtggcccag cccgtggagc aggccgtggg
     1381 cggcctgccc ggcgtgcggc gcgtggtcag caccgtgcag gcgggcctgg tgcaggtggt
     1441 catcgccttc gacggcgaca cggatccctg gcggtcccgg cagctggtgg gcgaacgcat
     1501 ctcctcgctc atgggcggct tcccgccggg caccctgccc ccgctggtga ccagcgcggc
     1561 gggccgcctg caggagatcc aggaactggt gctcacgggc cccggcatcg gccccgtggc
     1621 catccgcgac cacgcggtga aagtgatcgt cccgcggctc caggccgtgg cgggcgtggc
     1681 ccgggtggaa gccctgggag gcgaagcccg gcagatccag gtgctgctgc ggcccgaccg
     1741 aatgcgcctg ctgggggtgc cgctgggcaa agccatggag gccttggagg gcagcgacca
     1801 ggatggcggc gccggcatcc tcgagctgca ggacaagggc tggttcgtca c
//
LOCUS       DATGWW010000329         3264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_148088, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000329 DATGWW010000000
VERSION     DATGWW010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3264
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148088"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..450)
                     /locus_tag="VK150_04785"
     CDS             complement(85..450)
                     /locus_tag="VK150_04785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30656.1"
                     /translation="MTDPFITLMKNENVTWAAQRIRERVLCGKPDDAPDDLDQRIESL
                     IVTVMKVSLSHCDGSALRSGEGFYLDEMGKPQDAEFFEDCEPANPEGFNREMWKHGLE
                     NGYTPDGLTQLYGPRPADL"
     gene            complement(864..938)
                     /locus_tag="VK150_04790"
     tRNA            complement(864..938)
                     /locus_tag="VK150_04790"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(903..905),aa:Glu,seq:ttc)
     gene            complement(952..1026)
                     /locus_tag="VK150_04795"
     tRNA            complement(952..1026)
                     /locus_tag="VK150_04795"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(992..994),aa:Lys,seq:ttt)
     gene            complement(1201..2535)
                     /locus_tag="VK150_04800"
     CDS             complement(1201..2535)
                     /locus_tag="VK150_04800"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: protein motif:HMM:NF002223.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HLP30657.1"
                     /translation="MSLVRTNLAILGLQWGDEGKGKVVDLLSPHFRQVVRFQGGNNAG
                     HTVVVDGQSIALHQVPSGALHPGCFLVVGNGVVLNLEVFQQELDRLKARGFDLTGRLL
                     LSEKAHIILPHHIALDQWREVRADKVGAKIGTTGRGIGPAYEMKAARMGVRLGDLLHP
                     ETLAERIRPGYDEVRIRLGAAADLPALEAIVDGLRRTAEPFLTFIGDAQGHLIDAWER
                     GDSILFEGAQATLLDIDHGTYPFVTSSNCSLGGLFTGTGLPPKALDKILGIGKAYTTR
                     VGAGPFPAELLDATGDRLREVGREFGTTTGRPRRCGWFDAPITAHACRTNGVDGLAIM
                     KLDVLDGMDEVGLIVGYRTGEGTLTTKLPSCAADWAGLHPEVKRFKGWDSTRGITDHR
                     KLPAQAQTYLEALAESVEVPIAYLSTGPDRAEGCVYPGTFLEPLLGSVPAAR"
     gene            2682..>3264
                     /locus_tag="VK150_04805"
     CDS             2682..>3264
                     /locus_tag="VK150_04805"
                     /inference="COORDINATES: protein motif:HMM:NF014862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HLP30658.1"
                     /translation="MFEKFTEKARRVMFFARYEASQFGSESIQSGHLLLGLLRESEKT
                     STQLLERMGVQVSALRERLVAALTPKDRKITPSSTSIDIPMEDEVKRILQHATAESAK
                     LNHKHVGAEHLLLGMLREEGCLAGRLLKEAGADLIAAKEILLESTKEEKIAKKKKEHP
                     LLSEFARNLSEMAERGIFDNLIGRDAEVERIVQI"
BASE COUNT          561 a         1018 c         1133 g          552 t
ORIGIN      
        1 agggaaggcc agcgaagcca tccgcaaagc ccgtgaagag ggccgacccg tttgggtggt
       61 agtgggcagt tagcggccta gagctcacag atctgcaggc cgtggcccgt acagctgggt
      121 tagcccatca ggggtgtagc cgttttctag gccgtgcttc cacatctcgc gattgaaccc
      181 ctcggggttc gccggctcgc agtcttcgaa gaattctgca tcctggggct tccccatctc
      241 gtcgaggtag aaaccttcgc cgctacgcag agctgacccg tcgcagtgag acaggctgac
      301 tttcatgacc gtgacaatca gtgattcgat cctctgatcc aggtcgtccg gcgcatcatc
      361 gggcttcccg cacagcactc gttctcgtat gcgctgggct gcccaggtca cattctcgtt
      421 cttcatgaga gtaatgaagg ggtcggtcat ggctaattcc taattactcg attcgctgaa
      481 tcgtatgagc acaccatcgg tcggaatgcc acggatgtcc acccttggtc tgggtgtcct
      541 gaagaacctg cgccgaatag cccataggcc cctcccgagg gccagaggag ctaacggcga
      601 tctgaggttg ctagtccgag agcgatccgg gcggagaagg tggtcgcagt aacacacagc
      661 cctgttctcg cgccccaaag ggggttgaga acccgagaat ttggcctatc aacccgctcg
      721 actcgattct ctaacctgtg agtgcgaggg agtggcgaga acaccagtag atactaagtg
      781 ctaatataag tgatagatgt gaatcgaaag gttgaatccg tctccagtaa cagaaacgcc
      841 cgactgttgg tcgggcgttc atctggtagg gctaacggga tttgaacccg tgttaccgcc
      901 gtgaaagggc ggtgtcctga cccctagacg atagccccat ggggtggaac ttggtgggcc
      961 ctgcgggatt tgaacccgcg gccaacggct taaaaggccg ctgctctacc gctgagctaa
     1021 gggcccttgc cggtgggtcc aggtccgcga accctcgagc gcgcggtgca cgcgagcgtg
     1081 cggtgcctgg ttgggcagga cgaccagttt gcctgtgaac gggcgccggg tcaacctcgg
     1141 agcctggcgg acccgcgggc ggcacggcgg ggaggcccgc ttggcgctgg tcgaaccggg
     1201 ctaccgggcc gccgggacgg agcccaggag gggttccagg aaggtgccag ggtagacgca
     1261 gccttcggcc cggtcgggac cggtgctgag gtaggcgatg ggcacctcga cgctctcggc
     1321 gagcgcctcc aggtaggtct gggcctgggc ggggagcttc cggtggtcgg tgatgccgcg
     1381 ggtgctgtcc cagcccttga accgcttcac ttcaggatgg aggcccgccc agtcggcggc
     1441 gcagctgggc agcttggtgg tgagggtgcc ctcgccggtg cggtagccca cgatgaggcc
     1501 cacctcgtcc atgccgtcga ggacgtcgag cttcatgatg gccaggccgt ccaccccgtt
     1561 ggtgcggcag gcgtgggccg tgatgggggc gtcgaaccag ccgcagcgcc gggggcgtcc
     1621 cgtggtggtg ccgaactcgc ggcccacctc gcgcagccgg tcgccggtgg cgtccagcag
     1681 ctcggcgggg aaggggccgg cgcccacgcg ggtggtgtag gccttgccga tgcccaggat
     1741 cttgtcgagg gccttgggcg gcaggccggt gcccgtgaag agcccgccca ggctgcagtt
     1801 gctggaggtg acgaaggggt aggtgccgtg gtcgatgtcg aggagggtgg cctgtgcgcc
     1861 ctcgaagagg atgctgtcac cacgctccca ggcgtcgatc aggtgaccct gggcgtcccc
     1921 gatgaaggtc aggaagggct cggccgtgcg ccgcaggccg tccacgatgg cctccagggc
     1981 ggggaggtcg gcggcggcgc cgaggcggat gcgcacctcg tcatagcctg ggcggatgcg
     2041 ctcggccagg gtctcggggt ggagcaggtc gcccaggcgc acgcccatgc gggcggcctt
     2101 catctcgtag gcgggcccga tgccgcggcc ggtggtgccg atcttggcgc ccaccttgtc
     2161 ggccctcact tcgcgccact ggtcgagggc gatgtggtgg gggaggatga tgtgggcctt
     2221 ttcggagagc aggaggcggc cggtgaggtc gaagccccgg gccttgaggc ggtccagctc
     2281 ctgctggaag acctcgaggt tcagcaccac cccgttgccc accaccagga agcagcccgg
     2341 gtgcagggcc ccactgggca cctggtgcag ggcgatgctc tggccgtcca ccacgacggt
     2401 gtgcccggcg ttgttgcccc cctggaaccg cacgacctgg cggaaatgcg ggctgagcag
     2461 gtccacgacc ttgcccttcc cctcgtcgcc ccactgaagg ccgaggatcg ccagattggt
     2521 cctgaccagg ctcatgtcgc cctcccagcc ttccaggata ccgtccggcc ccggttctgt
     2581 cccgaccgga tcaggacaag gttgcaggaa ggcgctaccc tgttagcccg ctccggaacc
     2641 atcccggtcc cggcgccatc cctgacccgg aagggtgtcc cgtgttcgaa aagttcaccg
     2701 aaaaagcccg acgtgtgatg ttcttcgccc gctacgaggc gagccagttc ggttctgaaa
     2761 gcatccagag cgggcatctg cttctgggac tgctgcggga atcggagaaa accagcaccc
     2821 agctcctgga acgcatgggc gtccaggtga gcgccctccg ggagcgcctg gtggcggccc
     2881 tgacccccaa ggaccggaag atcaccccca gcagcaccag catcgatatt cccatggagg
     2941 acgaggtcaa gcgcatcctc cagcacgcca cggcggagag cgccaagctg aaccacaagc
     3001 acgtgggcgc cgagcacctc ctcctgggca tgctgcgcga ggagggctgc ctggccgggc
     3061 gcctgctgaa ggaggcggga gccgacctca tcgccgccaa ggagatcctg ctggagagca
     3121 cgaaggagga gaagatcgcg aagaagaaga aggagcatcc gctcctctcg gagttcgcgc
     3181 gcaacctctc cgagatggcc gagcggggca tcttcgacaa cctcatcggc cgggacgccg
     3241 aggtcgagcg catcgtccag atcc
//
LOCUS       DATGWW010000330         1523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_148102, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000330 DATGWW010000000
VERSION     DATGWW010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148102"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1063
                     /locus_tag="VK150_04810"
     CDS             <1..1063
                     /locus_tag="VK150_04810"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HLP30659.1"
                     /translation="GNGSLVPLHVRWLTTGAAGRVERLVALPGAAVNADEVILELSNP
                     ELQQSALDAAWQLKAAEADLQAARARLQGQLLDVRASLASAKANRSNASMGLKASEAL
                     AKAGLISHQDLLKARTLDEEVETRFAIEQSRLQIGSDSIKAQLATFEARVEQARALCT
                     LKRAQVDGLKVRAGLDGVLQQLPVQVGQQLQPGAVLAKVAQPTQLKAELKIGESQAKD
                     LALGQPVRIDTRSGLVPGKITRIDPSVQGGTVTVDVSLDGPLPQGARLDLSVEGIVEV
                     DRAADVLYVGRPVQAQAHGSASLFRLSADGTEATRVKVAFGRGSVATLEVLAGLQAGD
                     RVILSDASAWDGSDRIQIK"
     gene            1087..>1523
                     /locus_tag="VK150_04815"
     CDS             1087..>1523
                     /locus_tag="VK150_04815"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLP30660.1"
                     /translation="MTADPLIRLDGIRKVFITDEVETHALSDIQLDIHEGEFVSISGP
                     SGCGKSTLLAILGLLDAPSSGHYSLHGKGVGQLDLRERARLRNREIGFIFQSFNLIGD
                     LTILENVELPLVYRGMPPGERRARALDSLEVVGMSHRANHLPS"
BASE COUNT          262 a          527 c          498 g          236 t
ORIGIN      
        1 gggcaacggg tccctcgtgc cgctgcatgt gcgctggctc accaccggcg ccgccgggcg
       61 cgtggagcgc ctcgtggccc tgccgggtgc ggccgtgaat gcggacgagg tcatccttga
      121 attgagcaat cccgagcttc agcagtccgc cctcgatgcg gcctggcagc tgaaggccgc
      181 cgaggccgat ctgcaggcgg cccgggcccg cctgcagggc cagctgctgg atgtccgcgc
      241 atcactggcc tcggcgaaag cgaaccggtc caacgcgagc atgggcctga aggcgagcga
      301 ggccctggcg aaagcaggac tcatctccca ccaggacctt ctgaaggcga gaaccctgga
      361 tgaggaagtc gaaacccgct ttgccatcga acagagccgg cttcagattg gatcggactc
      421 catcaaggcc cagctggcca ccttcgaggc cagggtcgag caggcccggg ccctttgcac
      481 gctcaagcgc gcccaggtgg acggcctgaa ggtccgcgca gggctggacg gcgtgcttca
      541 gcagctgccc gtgcaggtgg gccagcagct ccagccgggc gcggtcctcg cgaaggtcgc
      601 ccagcccacg cagttgaagg ccgagctgaa gatcggcgag agtcaggcca aggacctggc
      661 gctgggccag cctgtccgca tcgatacccg cagcggcctg gtgcccggaa aaatcacccg
      721 catcgaccct tcggtccagg gcggaacagt caccgtggat gtcagcctcg acggccccct
      781 cccccaaggc gcacgcctcg acctcagcgt cgaaggcatc gtggaggtgg atcgggccgc
      841 ggacgtgttg tatgtcggac gccccgtcca ggcccaggct catggcagcg ccagcctgtt
      901 caggctgtcg gcagatggaa ccgaagccac ccgagtgaag gtggccttcg ggcggggttc
      961 cgtcgccacc ctggaggttc tggcgggcct gcaggcgggc gaccgggtga tcctctccga
     1021 tgcctcagcc tgggacggtt cggaccgtat tcagatcaag tgaccctcca accgcaagga
     1081 gcgaccatga ccgccgatcc cctcatccgt ctcgatggca tccgcaaagt cttcatcacg
     1141 gatgaagtgg agacccacgc cctgtccgac atccagctcg acatccatga aggggaattc
     1201 gtctccatct cgggcccatc cggatgcggg aaatccacct tgctcgccat cctcgggctg
     1261 ctggacgcgc cttcgtcggg ccactactcc ctccatggga aaggcgtcgg ccagctggat
     1321 ctccgggagc gcgcgcggct ccgcaaccgg gagatcggct tcatcttcca gagcttcaac
     1381 ctcatcggcg acctcaccat cctcgagaac gtggaactgc cgctggtgta ccgcggcatg
     1441 cctccaggcg agcggcgggc gcgggcgctg gattccctcg aggtcgtggg catgagccac
     1501 cgggccaacc acctgccttc cca
//
LOCUS       DATGWW010000331         1737 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_71150, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000331 DATGWW010000000
VERSION     DATGWW010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71150"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..716
                     /locus_tag="VK150_04820"
     CDS             <1..716
                     /locus_tag="VK150_04820"
                     /inference="COORDINATES: protein motif:HMM:NF014196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FliH/SctL family protein"
                     /protein_id="HLP30661.1"
                     /translation="IRAEDLQDRRLEAYPYFPVDAVMSQGAFDEGSGSVAGDLGDSDA
                     AGQPIEERIVDRLQEAERQAQEIARRAYEEGFASGEAEGRSFGESQYKSYILRLQEQL
                     LDLASASATLREALNEELVALAIAVGEHLALQQIERSPGAVKALMERVLEDLPFPLPR
                     GRREGEMPMQVFLNPADLEQLGDHFVGQTGMSLLPDNGLTRGSLRIEAPQGIFNGSLD
                     RRRERIMQVILRMQEEGAS"
     gene            713..>1737
                     /locus_tag="VK150_04825"
     CDS             713..>1737
                     /locus_tag="VK150_04825"
                     /inference="COORDINATES: protein motif:HMM:TIGR01026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030257 - type III protein secretion
                     system complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0046034 - ATP metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FliI/YscN family ATPase"
                     /protein_id="HLP30662.1"
                     /translation="MTTALDPSAIAARLRGLPKGDWMGRVTKVVGLVVESTGPDCSVG
                     EQMLIHGADAHGRPRLIHAEVVGFAGQRVLLMPIEETEGIRPGLWVESTGHQSELPLA
                     DALLGRVIDPLGRPLDGGPPIEATSHMPLQGPPPNPMRRKRINEVLSTGVRAIDGLLT
                     LGKGQRVGIFSGSGVGKSTLLGMVARNTSAEVNVITLVGERGRELREFIENDLGEAGL
                     KRSVVVVSTSDQSPLLRLRCAMAGTTVAEYFMRQGKDVLLMMDSVTRFAMAQREVGLS
                     AGEPPSSRGYTPSVFALLPRLMERAGTFEGMGSITGIYTVLVEGDDMNEPISDSVRGI
                     LDGHVVLS"
BASE COUNT          254 a          608 c          612 g          263 t
ORIGIN      
        1 tcatccgtgc cgaggacctc caggaccggc gtctggaggc ctacccgtat ttccccgtgg
       61 acgccgtgat gtcccagggc gccttcgacg agggctccgg ctccgtggcc ggcgacctgg
      121 gcgattcgga cgcggccggc cagcccatcg aggagcggat cgtggaccgc ctccaggagg
      181 ccgagcggca ggcccaggag atcgcacgcc gggcctacga ggagggcttc gcctccggcg
      241 aggccgaggg gcgctccttc ggcgagagcc agtacaagtc ctacatcctc cgcctgcagg
      301 agcagctcct cgacctggcc tccgcctcgg cgacgctgcg cgaggccctg aacgaggagc
      361 tggtggccct cgccatcgcg gtgggcgagc acctcgccct ccagcagatc gagcggtccc
      421 cgggcgcggt gaaggccctc atggagcgcg ttctcgagga ccttcccttt ccgctccctc
      481 ggggccggcg tgagggcgag atgcccatgc aggtcttcct gaaccccgcc gacctggagc
      541 agctcggcga tcacttcgtg ggccagaccg ggatgtccct cctcccggac aacggcctca
      601 cccgcggcag cctgcggatc gaggcgcccc agggcatctt caacggcagc ctcgaccgcc
      661 gtcgggaacg catcatgcag gtcatcctcc gcatgcagga ggagggcgcg tcatgaccac
      721 ggccctggac ccctccgcca tcgcggcccg cctccgcggg ctgccgaagg gggactggat
      781 gggccgggtc accaaggtgg tgggcctggt ggtggaatcc accggacccg actgctccgt
      841 gggcgagcag atgctcatcc atggcgccga cgcccatggc cggccccggc tcatccacgc
      901 cgaggtggtg gggttcgcgg ggcagcgggt gctgctcatg cccatcgaag agaccgaagg
      961 catccgtccg ggcctctggg tggagagcac gggccaccag tcggagctgc cgctggcgga
     1021 tgctctgctg ggccgggtga tcgatcccct gggccgcccc ctggatggcg gtccgcccat
     1081 cgaggccacc agccatatgc ccctgcaggg cccgccgccc aatcccatgc ggcgcaagcg
     1141 catcaatgag gtgctttcta ccggcgtgcg ggccattgac ggcctgctca ccctgggcaa
     1201 gggccagcgg gtgggcatct tctcgggctc cggcgtgggc aagtccaccc tgctgggcat
     1261 ggtggcgcgc aacacctcgg cggaagtgaa cgtgatcacg ctggtcggtg agcggggccg
     1321 cgagctgcgg gagttcatcg agaacgacct gggcgaggcc gggctgaagc gcagtgtcgt
     1381 ggtggtctcc accagcgatc agagcccctt gctccggctg cgctgcgcca tggccggcac
     1441 cactgtggcc gagtatttca tgcggcaggg caaagacgtg ctgctgatga tggacagcgt
     1501 cacccgcttc gccatggccc agcgcgaggt gggcctcagc gccggcgaac cgcccagctc
     1561 ccggggctac acgccctcgg tgttcgcgct gctgccgcgg ctcatggagc gggcgggcac
     1621 cttcgagggc atgggctcca tcactggcat ctacaccgtg ctggtggaag gcgatgacat
     1681 gaacgagccc atcagcgatt ccgtgcgcgg catcctggac ggccacgtgg tgctctc
//
LOCUS       DATGWW010000332         1714 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_148239, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000332 DATGWW010000000
VERSION     DATGWW010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148239"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..896)
                     /locus_tag="VK150_04830"
     CDS             complement(<1..896)
                     /locus_tag="VK150_04830"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HLP30663.1"
                     /translation="MAIKKIGVLGSGVMGSGIAAHVASAGCQVELLDIVIDEAAPDKL
                     AEGALAALAKSKPALAMHPSFLKKIRPGNLRDHLDRLSDCDWVVEVVKEDLAIKRELY
                     GRLEPKLKAGAWISSNTSGIPLKLLVEGRSDAFRKHFVITHFFNPVRYLRLLEFVTGP
                     EVDGAEAQAFRTWLEEGLGKEVVPAFDSPTFIGNRIGIHGIMATLHMALAEKIPFEVL
                     DTVLGDAAARAKSAAFRTADLAGVDILAATAKNVYDLCPNDEVRDVFKFPEFLQWMLD
                     SKLLGNKTKQGFFKKGPKDAKG"
     gene            complement(908..1330)
                     /locus_tag="VK150_04835"
     CDS             complement(908..1330)
                     /locus_tag="VK150_04835"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HLP30664.1"
                     /translation="MESRDPETYAIIGAAMEVHRVLGCGFAEPAYQEALAIEFQGRDI
                     PFVREAAIDIEYKGQRLRTTYRADFICFDRVIVELKALPRLGPIEDAQLVNYLKASGR
                     PVGLLINFGARSLQSKRMVGAANDTPQPKSVKSVESVD"
     gene            complement(1373..>1714)
                     /locus_tag="VK150_04840"
     CDS             complement(1373..>1714)
                     /locus_tag="VK150_04840"
                     /inference="COORDINATES: protein motif:HMM:NF014820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30665.1"
                     /translation="VAGVEPDRMGIGPVPAVRKVLDRFGLKLDQIDAMELNEAFAAQS
                     LAVIREGGYDPAKVNAWGGAIAVGHPLGASGARILTTLLNRLETDGGKYGIATMCIGG
                     GQGIASIIEKL"
BASE COUNT          286 a          554 c          549 g          325 t
ORIGIN      
        1 ttgcccttgg cgtccttggg gcccttcttg aagaaacctt gcttcgtctt gttgcccagc
       61 agcttgctgt ccagcatcca ctggaggaat tccgggaact tgaagacgtc ccgcacctcg
      121 tcgttcgggc acaggtcgta gacgttcttg gcggtggcgg cgaggatgtc cacgcccgcc
      181 aggtcggccg tgcggaacgc cgcgctcttg gcgcgggcgg cggcatcgcc cagcaccgtg
      241 tctagcacct cgaaggggat cttctcggcc agggccatgt gcagggtggc catgatgccg
      301 tggatgccga tgcggttgcc gatgaaggtg gggctatcga aagcgggcac cacctccttg
      361 ccgaggcctt cctccagcca ggtgcggaag gcctgggcct ccgccccgtc cacctcgggg
      421 cccgtcacga actccagcag gcgcaggtag cgcaccgggt tgaagaagtg ggtgatgacg
      481 aagtgcttgc ggaaggcgtc gctgcgccct tccaccagga gcttgagggg aatgcccgag
      541 gtgttggagc tgatccaggc acccgccttg agcttgggct ccaggcgccc gtacaactcg
      601 cgcttgatgg ccaggtcctc cttcaccacc tccaccaccc agtcgcagtc cgacaggcgg
      661 tccaggtgat cccgcaggtt gccgggccgg atcttcttga ggaacgaggg gtgcatggcc
      721 agcgccggtt tcgacttggc cagggccgcc agggcgccct ccgccagctt gtccggcgcc
      781 gcctcgtcaa tgacgatgtc cagcagctcc acctggcagc ccgccgacgc cacatgcgcc
      841 gcgatgcccg agcccatgac acccgaaccc agcacgccga ttttcttgat ggccataaga
      901 actcctttta gtccacagat tccacagatt tcacagattt tggttggggc gtgtcgttgg
      961 cggcgcccac cattcgtttg gattggagcg atctggctcc gaagttgatg agcagaccca
     1021 cgggcctgcc tgacgccttc agataattca ccaactgggc atcctcgatg ggaccgaggc
     1081 gcggaagggc tttcaattcg acgatgactc ggtcgaagca gatgaaatcg gcccggtagg
     1141 ttgtgcgcaa tcgctggcct ttgtattcaa tgtcaatggc cgcctcacgc acaaagggga
     1201 tgtccctgcc ttggaattcg atggccaggg cctcctggta cgcaggctcc gcaaacccac
     1261 agccaagcac ccgatgcacc tccatggccg caccgatgat ggcgtaggtt tccggatccc
     1321 tggactccac gactgcctca caaaatctgt gtgaatctgt gaaatctgtg gactacaact
     1381 tttcgatgat ggacgcgatg ccctggccgc cgccgatgca catggtggcg atgccgtact
     1441 tgccgccgtc ggtctcgagg cggttgagca gggtcgtgag gatgcgggcg ccgctggcgc
     1501 cgagggggtg gcccacggcg atggcgccgc cccaggcgtt caccttggcg gggtcgtagc
     1561 cgccttcgcg gatcaccgcg aggctctggg cggcgaaggc ctcgttgagc tccatggcgt
     1621 cgatctgatc gagcttgagg ccgaagcggt ccagcacctt ccgcacggcc ggcaccgggc
     1681 cgatgcccat gcggtcgggc tccacgcccg ccac
//
LOCUS       DATGWW010000333         1775 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_298195, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000333 DATGWW010000000
VERSION     DATGWW010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298195"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VK150_04845"
     CDS             complement(<1..195)
                     /locus_tag="VK150_04845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30666.1"
                     /translation="MPGRRRSESKEEATGVLTFRQRAFAGGENSDLPASVIAEDETPL
                     LQDLIAFPGYLEGHSGSKKYS"
     gene            complement(200..895)
                     /locus_tag="VK150_04850"
     CDS             complement(200..895)
                     /locus_tag="VK150_04850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30667.1"
                     /translation="MVDLVIEHVGSELTRAKAISALNRAQNYYLARTRIGLMRIKPDP
                     FLVTTAGTFDYAASTALFSSAGGVLGATQWDIRDLGLIYALDGLEGQFAYGGHDHVSQ
                     YPLEVDIPEGTPGLVKAPADWIPSRESLSEDCLITFWEDNDPGTTTIEWRAQAYRWPT
                     QFTSESVAFEMPEAYQDTLLLWKTLESLGVKQYGAASQNIRSLLQEEEPAFFTFAGRA
                     GGRVQAPRTPPRW"
     gene            complement(914..1456)
                     /locus_tag="VK150_04855"
     CDS             complement(914..1456)
                     /locus_tag="VK150_04855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30668.1"
                     /translation="MPDRVVAEEYDALNVPVIPCFRIHRNRSGKVGGVVFEVGWEGIR
                     IVPGEDGAGYKAKIDKNFTLAILADGYCEIPATRRNKERLELVLNPIKHMKLKLKPEK
                     QDDGRGGYREVMVPDLTSEGKAHYTDEVDHIEPPSYRKARSRRQFDAQRDSTVDLVRP
                     WLKQFVSVPGATMLPHPVEA"
     gene            complement(1476..>1775)
                     /locus_tag="VK150_04860"
     CDS             complement(1476..>1775)
                     /locus_tag="VK150_04860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30669.1"
                     /translation="EDAMSDQNQKPPEGAQNGQIAATADPAVKATATARPAAKEPTLR
                     EMGYELLSYTHKLERECAARLARRENADLTRAKDFLHEAGQWLEKAVRNLKAAGV"
BASE COUNT          252 a          576 c          614 g          333 t
ORIGIN      
        1 cgagtacttc ttcgatccgc tatggccttc caggtatccc gggaaggcga tgaggtcctg
       61 gaggagcggg gtttcgtcct cggcaatgac cgaggcgggc aggtcggagt tctccccgcc
      121 cgcaaaggcc cgctgccgga aggtcaggac cccggtggcc tcctccttcg attcgctcct
      181 acgtcgcccg ggcatggcct caccacctgg gcggcgtgcg cggggcctgc acccggccgc
      241 cggcgcgtcc tgcaaaggtg aaaaaggcgg gctcctcctc ctggagaagg gagcggatgt
      301 tctgcgaggc ggcgccgtac tgcttgacgc ccagggattc cagggtcttc cacaggagaa
      361 gggtgtcctg gtaggcctcg ggcatctcga aggcgaccga ttcggatgtg aattgggtcg
      421 gccaccggta cgcctgggcg cgccactcga tggtggtggt gccggggtcg ttgtcctccc
      481 agaaggtgat gaggcagtcc tcggagagcg actcccggga tgggatccag tccgccgggg
      541 ccttgaccag gcccggcgta ccctccggga tgtccacttc gagggggtat tgggacacgt
      601 ggtcatgccc gccataggcg aactgcccct ccaggccatc cagggcatag atcaggccca
      661 gatcccggat atcccactgg gtcgcgccca ggaccccgcc cgcagacgag aacagggccg
      721 tggaggccgc gtaatcgaag gtgccggccg tggtgacgag gaacggatcg ggcttgatgc
      781 gcatcagccc gatccgggtc cgggcgaggt aatagttctg cgcccggttg agggccgaaa
      841 tcgccttcgc gcgcgtgagc tcggagccca cgtgctcgat gacaagatcg accatctccg
      901 atccgtgcat gccttacgcc tccaccggat gcgggagcat ggtggcgccg ggcaccgaca
      961 cgaactgctt cagccagggc cggaccaggt ccacggtgct gtccctctgg gcgtcgaact
     1021 ggcgccggga gcgcgccttc cggtaggagg gcggctcgat gtggtccacc tcgtcggtgt
     1081 agtgggcctt gccctcggag gtcaggtccg ggaccatgac ctcgcgatag ccgccgcggc
     1141 cgtcatcctg cttttcgggc ttcagcttga gcttcatgtg cttgatgggg ttcagaacca
     1201 gctccagccg ctccttgttc cgcctggtgg cggggatctc gcagtagccg tcggccagaa
     1261 tggccaaggt gaaattcttg tcgatcttcg ccttgtagcc ggctccgtcc tcgcccggga
     1321 cgatacggat cccctcccat cccacctcga agaccactcc cccgaccttc ccggagcggt
     1381 tgcggtggat gcggaagcac gggatcacgg gcacgttcag ggcgtcgtat tcctccgcga
     1441 cgacgcggtc gggcatctcc tcgcttctcc gcatgtcaga ccccggccgc cttcaggttc
     1501 cggaccgcct tctccagcca ctggccggcc tcgtggagga agtccttggc gcgggtcagg
     1561 tccgcgttct cgcgcctggc gaggcgcgcg gcgcattccc gctccagctt gtgggtgtag
     1621 gagaggagtt cgtagcccat ttcgcgcagg gtgggctcct tggcggcggg cctggccgtg
     1681 gccgtcgcct tgacggcggg atcggccgtg gcggcgattt ggccgttctg ggcgccttcg
     1741 gggggtttct ggttctgatc ggacattgcg tcctc
//
LOCUS       DATGWW010000334         1552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_338097, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000334 DATGWW010000000
VERSION     DATGWW010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338097"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..746
                     /gene="rho"
                     /locus_tag="VK150_04865"
     CDS             <1..746
                     /gene="rho"
                     /locus_tag="VK150_04865"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HLP30670.1"
                     /translation="VAPPKAGKTILMQKLANSISENHPEVVLIVLLIDERPEEVTDME
                     RTVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNSVI
                     PPSGKVLSGGLDSNALQKPKRFFGAARNIEEGGSLTIIATALIDTGSRMDDVIFEEFK
                     GTGNSEIVLDRKLSDKRIFPAMDIQKSGTRKEDLLIEPAKLAKIWVLRKILGASGPSE
                     SMELLVDRLGKAKTNDEFLANLQEPPARR"
     gene            1026..1550
                     /locus_tag="VK150_04870"
     CDS             1026..1550
                     /locus_tag="VK150_04870"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HLP30671.1"
                     /translation="MAFPQASAPAATKAPTAGQVLDRQLANLEREFVPAAEAMPEEKF
                     HFAPTNGEFKGVKTFALQVRHVAAANYSFGASFLGEKPPVDTGGDDGPEALKTKAEIV
                     KFLKDSFAYAHKAFGTITNENITGAIPTPWGQGTISRLGLANLTVAHGFDHYGQMAVY
                     LRMNGIIPPASRKP"
BASE COUNT          294 a          548 c          480 g          230 t
ORIGIN      
        1 tcgtcgcccc gcccaaggcg ggcaagacga tcctgatgca gaagctggcc aactccatca
       61 gcgagaacca ccccgaggtc gtgctgatcg tgctgctcat cgacgagcgg cccgaggagg
      121 tgaccgacat ggagcggacg gtgaagggcg aggtggtggc ctcgaccttc gacgagcccg
      181 cgtcgcggca cgtgcaggtc gccgagatgg tcatcgagaa ggccaagcgc ctcgtcgagc
      241 acaagcgcga cgtggtgatc ctgctcgact ccatcacgcg cctggcgcgc gcctacaact
      301 cggtgattcc gccgtcgggc aaggtgctct caggaggcct ggactcgaac gcgctccaga
      361 agccgaagcg gttcttcggc gccgcgcgga acatcgagga agggggctcg ctcaccatca
      421 tcgccactgc cctcatcgac accgggtcgc gcatggacga cgtgatcttc gaggagttca
      481 agggcaccgg caacagcgag atcgtgctgg accgcaagct cagcgacaag cgcatcttcc
      541 cggccatgga catccagaag tccggcacgc gcaaggaaga cctgctcatc gagcccgcca
      601 agctcgccaa gatctgggtg ctgcggaaga tcctcggcgc cagcggcccc agcgagagca
      661 tggagctgct cgtggatcgc ctgggcaaag ccaagaccaa cgacgagttc ctggcgaacc
      721 tccaagagcc gcccgcccgg cgctaacagc gccgtgcgga gctccatctg gcgctgccaa
      781 ggcagcgtca gatgggagcg acgatggggc ggcgatccgg catgggtgga ccgccatccc
      841 acccggtggg gccaccctca tcgaccggtc gcggcctatt cgtcaccttc catcccctcc
      901 aatcgcaccg cctgccccaa ctcctgttca aacggttccg ccatggcgct atgctggccc
      961 ctccatacca ggagcctcag atgaacagga cccccttcgg tctggcgcta ttccttgtgg
     1021 gaggcatggc cttcccacag gcgtcggctc cggccgcgac gaaagctccc acggccgggc
     1081 aggttttgga tcgccagctc gccaaccttg agcgcgagtt cgtgcccgcc gccgaggcca
     1141 tgcccgagga gaagttccac ttcgccccca cgaacggcga attcaagggc gtgaagacct
     1201 tcgccctgca ggtgcgccac gtggcggcgg ccaactattc gttcggcgcc agcttcctgg
     1261 gcgagaaacc cccggtggac acgggtggcg acgacggccc cgaagccctc aagaccaagg
     1321 cggagatcgt gaagttcctc aaggattcct tcgcctacgc ccacaaggcc ttcggcacca
     1381 tcaccaacga gaacatcacg ggtgccatcc ccacgccgtg gggccagggc acgatttcgc
     1441 gcctgggcct ggccaacctc acggtggccc acggcttcga ccactacggc cagatggccg
     1501 tgtatctgcg catgaacggc atcatcccgc ccgccagccg caagccctga cc
//
LOCUS       DATGWW010000335         3836 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_71326, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000335 DATGWW010000000
VERSION     DATGWW010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3836
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71326"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1202
                     /locus_tag="VK150_04875"
     CDS             <1..1202
                     /locus_tag="VK150_04875"
                     /inference="COORDINATES: protein motif:HMM:TIGR03592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YidC/Oxa1 family insertase periplasmic-domain
                     containing protein"
                     /protein_id="HLP30672.1"
                     /translation="LKGTGFETVREARSTAGTEVIFENAAGERLTYLVPARGHNLKVE
                     AVTPRQAPLVLLVNPATDEPVKHLGRVFSLTEKNIEAVTWGEMLHDPFFSFMGAKRKV
                     LPATSERLGLDAGLDKNAKDQRNHYFAALWKLPRLAGRDTAGYELLPQNGRLEASLYL
                     GPKQAEHLLAFEKPFTQVIDYGFFGAVAHLLFWILKKVHALVGNWGWAIVIFTVIIRL
                     ATWTLNTKQTISMLRMKDFEPHQKALQAKYEKFGSDMTKKAEMQKELMALYKKNGHNP
                     MGGCLPMLLQMPIFLALWSMLNAVFELRHAPFFGWITDLSAKDPYFIFPVLMGASMFA
                     QQAVTPAVGDPAQRKMMLVLMPAMMTFFFAQSPAGLTIYYFVFNMIGLGQTWWIMRTY
                     KPQPITV"
     gene            1212..1676
                     /locus_tag="VK150_04880"
     CDS             1212..1676
                     /locus_tag="VK150_04880"
                     /inference="COORDINATES: protein motif:HMM:NF013583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="R3H domain-containing nucleic acid-binding
                     protein"
                     /protein_id="HLP30673.1"
                     /translation="MRKSGVSLEAVPELITRWGGLLGLSLEAKFAPSGDEEAFPNRVA
                     VSGPDASHLGANRGAALDALQFLIHEAQGEREDQKLAYLDAKGARLFRMQEVMAMGRF
                     AAEKARELGSHTLGALSARERRWVHLVVSREEGLGTESEGTGTFKPVRVFRK"
     gene            1686..2993
                     /locus_tag="VK150_04885"
     CDS             1686..2993
                     /locus_tag="VK150_04885"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA modification GTPase"
                     /protein_id="HLP30674.1"
                     /translation="MNPPPICAPATALLPSAVALVRVSGAGLASRLAPLVALPEGRRA
                     ALRTLCWDGFRERALVLYFPGPSSYTGEDVVEFQIHGNPRLAHRLLHHLGTLGIRLAE
                     PGEFTRRALLNGKQGLLEVEALRDLVAAETDTQIRLAQARAGAQPAWITATRQALAPW
                     LARAEAAVDYGEEEGILLNLDDLVADLAPLRERFHVEQSRTRAARHLRDGIRLALAGR
                     PNAGKSTLFNALAGEDRAIVTEVPGTTRDVLEVRCEWRGLPLRLYDTAGLRETEDPVE
                     RLGVARVGPILQSADLILHLIPAGDGASDPVLDRALAPFSGKVVAVRTFGDRAVPEGP
                     EPVISVPGDNLDALEAVLRERLLGGLAPEACLGALATERQGLLLEDLARQLDLLCGLD
                     PACPPELPASLLQGAWGLLARLTGEDRAESALDALFSGFCLGK"
     gene            3028..>3836
                     /gene="gatB"
                     /locus_tag="VK150_04890"
     CDS             3028..>3836
                     /gene="gatB"
                     /locus_tag="VK150_04890"
                     /inference="COORDINATES: protein motif:HMM:NF004012.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HLP30675.1"
                     /translation="MTGGYEAVIGLEVHVQLRTRTKMFCACRNQVGAPPNSLTCPVCL
                     GLPGALPALNAEAVRMALALGLAVDARIQPESTFYRKQYFYPDLPKGYQITQGPVALV
                     EDGHLALPGDPKVRGTDAPVRVRLERAHLEEDAGKSHHDLDGQASHVDLNRAGVPLLE
                     IVGAPDLRSAQEASDYLKALHRLVVALGICDGNLEEGSFRCDANVSVRRRGAPEFGTR
                     VEVKNLNSFRFVRQALEFEIARHAALLDQGGSVQMETRGWDAAAGETRGQRT"
BASE COUNT          575 a         1378 c         1315 g          568 t
ORIGIN      
        1 gcctcaaggg cactggcttc gagaccgtgc gggaagcgcg cagcacggcc ggcaccgaag
       61 tgatcttcga gaacgccgcc ggtgagcgcc tgacctacct cgtgcccgcc cggggccaca
      121 acctgaaggt ggaggcggtc accccgcgcc aggcgcccct ggtgctcctg gtgaaccccg
      181 ccaccgacga gcccgtgaag cacctgggcc gggtgttctc cctgaccgag aagaacatcg
      241 aggccgtcac ctggggcgag atgctgcacg accccttctt cagcttcatg ggcgccaagc
      301 gcaaggtcct gccggccacc tcggagcgcc tgggcctgga cgccggcctc gacaagaacg
      361 ccaaggacca gcgcaaccac tacttcgccg ccctgtggaa gctgccccgc ctggcgggtc
      421 gcgacaccgc gggctacgag ctgctcccgc agaacggccg cctggaggcc tcgctctacc
      481 tggggcccaa gcaggcggag cacctcctgg ccttcgagaa gcccttcacc caggtcatcg
      541 actacggatt cttcggcgcc gtggcgcacc tgctcttctg gatcctcaag aaggtccacg
      601 ccctggtggg caactggggc tgggccatcg tgatcttcac ggtgatcatc cgcctggcca
      661 cctggaccct gaacaccaag cagaccatct ccatgctgcg catgaaggac ttcgagccgc
      721 accagaaggc cctccaggcc aagtacgaga agttcggcag cgacatgacc aagaaggccg
      781 agatgcagaa ggagctcatg gccctctaca agaagaacgg ccacaacccc atgggcggct
      841 gcctgcccat gctgcttcag atgcccatct tcctggccct ctggtcgatg ctcaacgcgg
      901 tcttcgagct gcgccacgcg cccttcttcg gctggatcac cgacctgtcg gcgaaggatc
      961 cctacttcat cttcccggtg ctcatgggcg cgtccatgtt cgcccagcag gccgtcacgc
     1021 ccgccgtggg cgacccggcc cagcgcaaga tgatgctggt cctcatgcct gcgatgatga
     1081 ccttcttctt cgcgcagagc cccgccggcc ttacgatcta ctacttcgtc ttcaacatga
     1141 tcggcctggg ccagacctgg tggatcatgc gcacctacaa gccccagccc atcaccgtgt
     1201 aggagtacgc catgcggaag agcggtgtca gcctggaagc cgtgcccgag ctcatcaccc
     1261 gctggggcgg gctcctgggc ctgtccctcg aggccaagtt cgcgccctcg ggcgatgagg
     1321 aggccttccc caaccgcgtg gccgtctctg gccccgacgc gtcccacctg ggcgccaacc
     1381 ggggcgcggc cctcgacgcc ctgcagttcc tgatccacga ggcccagggt gagcgcgagg
     1441 accagaagct cgcctacctg gacgccaagg gtgcccgcct cttccgcatg caggaggtca
     1501 tggccatggg ccgcttcgcc gccgagaagg cgcgggagct gggcagccat accctcggcg
     1561 ccctgagcgc ccgggagcgc cgctgggtgc acctggtggt cagccgcgag gagggcctgg
     1621 gcaccgagag cgagggtacc ggcaccttca agcccgtgag ggtcttccgg aagtagactg
     1681 gcccggtgaa tccgccgccg atctgcgccc ccgccactgc cctgctcccc tcggcggtcg
     1741 cgctggtgcg cgtgtccggc gcggggctgg cctcccgcct cgcgcccctg gtggcgctgc
     1801 cggagggccg gagggccgcg ctgcggaccc tgtgctggga cgggttccgc gagcgggccc
     1861 tggtgctgta ctttcccggc ccttcgagct acacgggcga ggacgtggtc gagttccaga
     1921 tccacggaaa cccgcggctc gcccatcggc tcctccacca cctggggacc ctgggcatcc
     1981 gcttggcgga acccggggag ttcacccggc gggccctcct gaacggcaag cagggtctgc
     2041 tggaggtgga ggccctccgg gacctggtgg ccgcggagac cgacacccag atccgcctgg
     2101 ctcaggcccg ggccggagcc cagccggcct ggatcacggc cacgcggcag gccctggcgc
     2161 cctggctcgc ccgggccgag gccgcggtgg attatgggga agaagaaggc attttgttga
     2221 atttggatga cttggtggcc gatctagcgc ctctgcggga acggttccac gtggaacagt
     2281 cccggacccg ggcggcccgg cacctgcggg acggcatccg cctcgccctg gcgggccggc
     2341 cgaacgccgg gaagagcacc ctcttcaacg ccctggccgg ggaggaccgg gccatcgtca
     2401 ccgaggtgcc cggcaccacc cgggacgtgc tggaggttcg ctgcgagtgg cgggggctgc
     2461 ccctgcggct atacgacacg gccggcctgc gggaaaccga ggatcccgtg gagcgcctgg
     2521 gcgtggcccg ggtggggccg atcctgcagt ccgcggacct gatcctgcac ctgatcccgg
     2581 cgggggacgg ggcctcggac ccggtgttgg accgcgccct cgcgcccttt tccggcaagg
     2641 tggtggcggt ccggaccttc ggcgaccgcg ccgtcccgga gggccccgag cccgtcatct
     2701 cggttcccgg ggacaacctc gatgcgctgg aggccgtgct tcgcgagcgc ctgctgggag
     2761 gcctggcccc ggaggcctgc ctgggcgccc tggccacgga gcgccagggc ctcctcctgg
     2821 aagacctggc ccggcaactg gacctgctct gcggactgga tcccgcctgc ccgcccgaac
     2881 tgcccgcttc cctgctccag ggggcctggg gcctcctggc ccggctcacg ggcgaggacc
     2941 gggcggagag cgcgctggat gcgctcttca gcggcttctg cctcgggaag taggcctggg
     3001 cgaagtagac tggccgggga gctgcggatg acgggtggat acgaggcggt gatcgggctt
     3061 gaggtccacg tgcagctccg gacgcggacc aagatgttct gcgcctgccg gaaccaggtc
     3121 ggggcgccgc ccaacagcct cacctgcccc gtgtgcctgg gcctgcccgg cgccctgccg
     3181 gcgctcaacg ccgaggctgt gcggatggcc ctggccctgg ggctggccgt ggacgcgcgg
     3241 atccagcccg agagcacctt ctaccgcaag cagtacttct accccgacct gcccaagggc
     3301 taccagatca cccagggccc cgtggccctc gtggaagacg ggcacctggc ccttcccggg
     3361 gatccgaagg tccgcggcac cgacgcgccg gtccgcgtcc gcctggagcg ggcccacctg
     3421 gaggaggatg ccggaaagag ccaccacgac ctggatggcc aggccagtca tgtggacctc
     3481 aaccgggccg gggtgcccct cctggaaatc gtgggtgcgc cggatctccg cagcgcccag
     3541 gaggcctcgg attacctcaa ggccctgcac cgcctggtgg tggccctggg catctgcgac
     3601 ggcaacctgg aggagggcag cttccgctgc gacgccaacg tgagcgtgcg ccgaaggggt
     3661 gcgccggaat tcggcacacg cgtggaagtg aagaatctga actccttccg cttcgttcgg
     3721 caggcgctgg agtttgaaat cgcccgccac gccgccctcc tcgaccaggg cggctccgtg
     3781 cagatggaga cgcggggctg ggacgccgca gccggcgaaa cccggggcca gcgcac
//
LOCUS       DATGWW010000336         3857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_71388, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000336 DATGWW010000000
VERSION     DATGWW010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3857
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71388"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..316)
                     /locus_tag="VK150_04895"
     CDS             complement(<1..316)
                     /locus_tag="VK150_04895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30676.1"
                     /translation="MEVRKSLVVNSTPLETRIALLENGQLCELFLERTMNKSQVGDVY
                     KGRVAKLLPGMQSAFVNIGGVKDGFLYLDDPVAQRLGADLSAEEEGDETASEDLPPPP
                     PPL"
     gene            complement(610..1008)
                     /gene="panD"
                     /locus_tag="VK150_04900"
     CDS             complement(610..1008)
                     /gene="panD"
                     /locus_tag="VK150_04900"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR00223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HLP30677.1"
                     /translation="MLRHFLLGKIHRATVTRADLDYVGSITLDPLLIEAAGFMENEKI
                     DIYDVTNGSRLSTYVIPGVAGSGEVGINGAAAHLVNAGDLVIIAAYGWMTPEEAETVA
                     PKVVFVDERNRITERRTQERTPLCVAAFTD"
     gene            complement(1103..1615)
                     /locus_tag="VK150_04905"
     CDS             complement(1103..1615)
                     /locus_tag="VK150_04905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30678.1"
                     /translation="MFRTLLASSLIALTTLSAAASPDRPDRDHHRDGRRDDRRDDRRE
                     DRRDDREDRHHWREHDKAERKYWKERDKEARKYDRHRYEDDRRRGHHVPPPWMNGYWR
                     PEEHRRYVALVPGDPSRMYVFLEGRWVLRQVRDPRARLDLEGAFRLPVAPPPVAPPRI
                     GVDLHVVLFN"
     gene            complement(1625..1999)
                     /locus_tag="VK150_04910"
     CDS             complement(1625..1999)
                     /locus_tag="VK150_04910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30679.1"
                     /translation="MLLQVLIATSLLALPQGRGHDKRDHDGPPGHGRKGVPPGLAKKG
                     GLPPGLAKKFGPRLPERPYIAVDPRYTDRAWFLIEGRWELRQGFSVGLQAEVRDTLRL
                     PAAQPPVPLPRVGVDLHVVLFN"
     gene            complement(2057..2947)
                     /gene="panC"
                     /locus_tag="VK150_04915"
     CDS             complement(2057..2947)
                     /gene="panC"
                     /locus_tag="VK150_04915"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HLP30680.1"
                     /translation="MRVVRTIADLRALLRPLREEGKRIGFVPTMGFLHEGHGALIRQS
                     AARCDATVVSIFVNPTQFGPSEDLASYPRDLERDQNLCLEAGATVLFLPEVAEIYPTG
                     FQTHIEPGRLAEPLCGRFRPGHFRGVATVVAKLFNMVQPDLAFFGQKDFQQTVVVRRM
                     ARDLNLPVDVVVVPTVREADGLALSSRNTYLDDDARRRALCLSEGLLAAKAAFEGGER
                     NSARLLELARAPLSGVDSVQYLELVDAQNLEPFQGEVDRAVALCVAAYVGSTRLIDNV
                     VLAPSPLDAVLNVSLSPQSV"
     gene            complement(3000..>3857)
                     /gene="panB"
                     /locus_tag="VK150_04920"
     CDS             complement(3000..>3857)
                     /gene="panB"
                     /locus_tag="VK150_04920"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: protein motif:HMM:NF001452.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HLP30681.1"
                     /translation="HLPADTRVRVTLPQLHTWHHAGRKLVMTTAYDAVTARIADAAGV
                     DIILVGDSVGNVCLGFENTLPVSMAMMNHHLEAVARVQPAAMLVADMPYLSFHLSVED
                     TLRNAGGFLQRGAQAVKLEGGAKRLPMIHALLDAEIPVMGHLGLTPQSVNPMGGFKVQ
                     GRHKGEALRLLEDAQKLQDAGCFSIVLEGIPADLAAKVTETIEIPTIGIGAGPHCSGQ
                     VLVFHDILGLLPGTSPKFVRRYAEGFEDLRNALATWAEDVRAGGFPDGRESYTLPEAV
                     RPALTQWHP"
BASE COUNT          626 a         1225 c         1356 g          650 t
ORIGIN      
        1 ggaggggtgg gggaggcggg ggcaggtctt ccgaggcggt ctcgtcgccc tcctcctcgg
       61 ccgagaggtc agcgcccaga cgctgggcga cggggtcatc caggtagagg aacccgtcct
      121 tgacgccgcc gatgttgacg aaggcgctct gcatgccggg aagcagcttg gccacccgac
      181 ccttgtagac atcccccacc tggctcttgt tcatcgtccg ctcgaggaac agctcgcaga
      241 gctgtccgtt ctcaagcagg gcgatgcgcg tctccagggg ggtcgaattg accaccaggg
      301 acttgcgtac ttccatggaa ccaacctttc agaactttgc aggtgggcgc cttgccaccc
      361 ccgcgggccc cggggtcgta ccagaccgaa gggtgatcca tttctaccat gacccttgga
      421 tgccgcgcca acggtcaaag gttcctggat gagattctat tcctgaaaaa acaggagcca
      481 ggacaggact gatagaatta aaagatggat taacaagaat taaggtcttg gcgaggtgcc
      541 ttgatctggc ggaaccaggc ccgaatcttg tcaatcctgc tttcaatcct gtgaatcctg
      601 ccagcgcatt cagtccgtga aggcggccac gcagaggggc gtccgttcct gggtccggcg
      661 ttcggtgatg cggttgcgct cgtccacgaa aaccaccttc ggagccacgg tttcggcctc
      721 ctccggggtc atccaaccgt aggcggcgat aatcaccagg tcaccggcgt tcaccaaatg
      781 ggccgcggcg ccattgatcc ccacctcgcc ggagcccgcc acgcccggga tgacgtaggt
      841 cgacaggcgt gacccgttgg tcacgtcgta gatgtcgatc ttctcgttct ccatgaagcc
      901 ggcggcttcg atgagcagcg gatccagggt gatggacccc acatagtcca gatcggccct
      961 cgtcacggtg gcgcgatgga tctttccgag caggaagtgg cgcagcatgc atcctccggt
     1021 ccaggctccc tccggagtcc cggccaacgc ctaaggatga gcccaggact accctgggtc
     1081 cagcctcgat ttttacccaa gcctagttga agaggaccac atgcagatcc accccgatcc
     1141 gcggcggcgc cacggggggt ggggccacgg gcaggcggaa tgccccctcg aggtccaggc
     1201 gggcgcgggg atcgcggacc tgccgcagca cccaccggcc ctccaggaag acatacatcc
     1261 gggaggggtc gccgggcacc agggccacgt agcggcggtg ctcctcgggt cgccagtagc
     1321 cgttcatcca gggcggcgga acatggtggc cccgtcgccg gtcgtcctca tagcggtgac
     1381 gatcatactt tcgtgcctct ttatctcttt ccttccagta cttgcgctcc gccttgtcgt
     1441 gctccctcca gtggtgccgg tcctcgcggt catcacgccg gtcctcccgg cggtcatcac
     1501 gacgatcatc tcggcgcccg tctcggtggt ggtcccggtc cgggcggtcc ggcgaggcgg
     1561 cggcggacag ggtggtaagg gcgatcagcg aactggccag cagcgtgcgg aacatggcgg
     1621 actcctagtt gaacagcacg acgtggaggt ccaccccgac ccgcggcagg gggacggggg
     1681 gctgcgcggc aggcaggcgg agggtgtcgc ggacctccgc ctgcaggccc acgctgaagc
     1741 cctggcggag ttcccagcgg ccttcgatga ggaaccaggc ccggtcggtg tagcgggggt
     1801 ccacggcgat gtaggggcgc tcgggaaggc gggggccgaa cttcttggcg aggcctggcg
     1861 gcaggccgcc cttcttggcc aggccggggg ggacgccctt gcggccatgt cccggcgggc
     1921 cgtcgtgatc ccgtttgtcg tggccgcgcc cctggggcag ggccagcagg ctggtggcga
     1981 tcaggacttg gaggagcatg ggaccccctg gcaccccccg ggtcagcggc atggcgagtg
     2041 gggggatgga tccattctag acgctctggg ggctgaggct cacattcagc actgcgtcca
     2101 ggggggaagg ggccaggacg acgttgtcga tcagccgggt gctgcccacg taggcggcca
     2161 cgcagagggc cacggcgcgg tccacctcgc cctggaaggg ctccaggttc tgggcgtcca
     2221 ccagctcaag gtattggacc gaatccaccc cggagagggg ggcgcgggcc agctcgagca
     2281 gcctggcgct gttccgttcg cccccttcga aggcggcctt ggcggccagc aggccttcgc
     2341 tgaggcagag ggcacgccgg cgggcgtcgt cgtcgaggta ggtgttgcgg ctgctgaggg
     2401 ccaggccgtc ggcttcgcgg acggtgggca ccaccaccac gtccaccggc aggttcaggt
     2461 ctcgggccat gcgccggacg accacggtct gctggaagtc cttctggcca aaaaaggcga
     2521 ggtcgggctg gaccatgttg aagagcttcg ccaccaccgt ggccacgccc cggaagtggc
     2581 cggggcggaa gcgtccgcag aggggttcgg ccagacggcc gggctcaatg tgggtctgga
     2641 accccgtggg gtagatttcg gcgacctcgg gcaggaagag cacggtggcg ccggcctcaa
     2701 ggcacaggtt ctggtcccgt tccaggtccc gggggtagct ggcgagatcc tcgctggggc
     2761 cgaactgggt gggattgacg aagatcgaca ccacggtggc atcgcagcgg gcggcgctct
     2821 ggcggatcag ggccccgtgg ccttcgtgca ggaatcccat ggtggggacg aagccgattc
     2881 gcttgccttc ctctctcaag ggacgaagga gggctcgtag atcggcgatg gtacgtacaa
     2941 ctcgcatgga caaaagcggg atccttccga aggtgcctgc cagcttacca agggcggcct
     3001 caggggtgcc actgggtcaa agccggacga acggcttctg gaagggtata agattcccgg
     3061 ccatccggga accctccggc ccgcacatcc tcggcccagg tggccagcgc gttgcgtagg
     3121 tcttcgaatc cttcggcata gcgtcggacg aacttgggag aggtgcccgg cagcagcccg
     3181 aggatgtcgt ggaagaccag cacctggccc gagcagtgag gcccggcgcc gatcccgatg
     3241 gtggggatct cgatggtttc agtgaccttg gccgccaggt cggcggggat gccctcgagc
     3301 acgatgctga agcagcccgc gtcctggagc ttctgagcgt cctccagcag ccgcagggcc
     3361 tcgcccttgt gccggccctg caccttgaaa cctcccatcg ggttcacgct ctggggcgtg
     3421 aggcccaggt ggcccatgac cgggatctcg gcatccagca aggcatggat catgggcagc
     3481 cgcttggccc cgccctccag cttcaccgcc tgggcgcccc gctggaggaa tcccccggcg
     3541 ttcctcaggg tgtcttccac gctcaggtgg aagctcaggt agggcatgtc cgccaccagc
     3601 atggcggcgg gctggacgcg ggccacggcc tccaggtggt ggttcatcat ggccatgctg
     3661 acgggcagcg tgttctcgaa gcccaggcag acgttcccga cgctgtcccc cacgaggatg
     3721 atgtcgacgc cggccgcgtc ggcgatgcgt gcggtcaccg catcgtaggc ggtggtcatg
     3781 accagcttcc ggcccgcgtg gtgccaggtg tgcagctggg gcagggtgac gcggacgcgc
     3841 gtgtcggcgg gcaggtg
//
LOCUS       DATGWW010000337         1843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_193622, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000337 DATGWW010000000
VERSION     DATGWW010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193622"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            154..861
                     /locus_tag="VK150_04925"
     CDS             154..861
                     /locus_tag="VK150_04925"
                     /inference="COORDINATES: protein motif:HMM:NF018510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30682.1"
                     /translation="MLTTVILRGHLGRQFGSRRTLAVRSPSEAVQALCATVPGFERAL
                     LESGCGYKILVRGEAINPQEELALPTGQGEIRIVPVVAGAKNEFLQILTGAALLALAF
                     TPMGIGTTALEYGLNGIFGMGAAGIASATSMVGYMGLAMALGGVSRLLTGAQDPTVNQ
                     SSQRTNGVFTSAQNTVAQGVPVPCAYGEIYCTPPLISEAIDQEVITSKIFGNFDGAGT
                     WAGNGDTAPWGASIKAV"
     gene            863..>1843
                     /locus_tag="VK150_04930"
     CDS             863..>1843
                     /locus_tag="VK150_04930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30683.1"
                     /translation="MGIAYKSADQNWITGEDPIFPGGGGGKWSTDEHASPDQQAKLLF
                     ALSNGEIEGPLHPTAGLRDVYLNDVPVMNPDGSKNFNGISVALTSGTLTQAPIPGFAD
                     VEALTSSGNLISNASPQSFSISNSGPTAARVNLSIPAIYQQGTDGKMSSDTVTLTFEV
                     SNNGGGYVDVTSTVDPVLLGTITAQSTGAITRSYRIPLTTVGTGPWVVRVSRVTVDNN
                     GTYRDNRVYLQSWAAITEQQLRYPRTSLLAFSCDAKRFSSMPKVSIKVRGIKVQVPAN
                     YTPATRDPDTGVWTAATYATTGPGTTGGSWDGTFKASWTSNPAWILYDLAT"
BASE COUNT          316 a          672 c          581 g          274 t
ORIGIN      
        1 cctgatgcgg gtggcctcct gggtcgtgcc caaccacgcc gccatctacc tgggcgccgg
       61 gtggatcctg caccaccttt ggggccgcct gtcctgccgc gaactctggg gcccatggat
      121 ggcctccacc acgcacgtcc tgaggaggga ctgatgctca ccaccgtcat cctgcgcggc
      181 cacctggggc gccagttcgg ctcccgccgc accctcgccg tccggagccc ttccgaggcg
      241 gtccaggccc tctgcgccac cgtcccgggg ttcgagcggg cgctgctgga gagcggatgc
      301 ggctacaaga tcctggtcag gggagaggcc atcaaccccc aggaggaact ggcgctgccc
      361 acgggccagg gggagatccg catcgtgccg gtggtggccg gcgccaagaa cgagttcctg
      421 cagatcctaa ctggggcggc tctcctggcg ctggccttca ccccgatggg gatcgggacc
      481 acggccctgg agtatgggct gaacggaatt tttgggatgg gggctgccgg gatcgccagc
      541 gctacctcca tggtcggcta tatgggcctg gccatggccc tgggaggcgt ctccaggctc
      601 ctgacggggg cccaggatcc caccgtcaac cagtcctccc agaggaccaa cggggtgttc
      661 accagcgcgc agaacaccgt ggcccagggg gtcccggtgc cctgcgccta cggggagatc
      721 tactgcaccc cacccctgat cagcgaggcc atcgatcagg aggtcatcac gtccaagatc
      781 ttcgggaact tcgacggcgc gggcacctgg gcgggcaacg gcgacacggc gccctggggc
      841 gcctccatca aggcggtgta gcgtggggat tgcatacaag agcgcggacc agaactggat
      901 caccggggaa gatcccattt tcccgggcgg tggcggcggg aagtggagca cggacgagca
      961 tgcgtctccg gaccagcagg ccaaactcct cttcgcgctc tccaacggcg agatcgaggg
     1021 cccgctccac cccacggcgg ggctcaggga tgtctacctc aacgacgtgc cggtcatgaa
     1081 cccggacgga tccaaaaatt tcaatgggat ctccgtggcc ctcacctccg gcaccctgac
     1141 ccaggcgccc atcccaggat tcgccgacgt ggaggcactg acgagcagcg gcaacctcat
     1201 cagcaacgcc agcccccagt cgttctccat ctcgaacagc ggccccacgg cggcacgggt
     1261 gaacctcagc atccccgcca tctaccagca gggcacggac ggcaagatgt cctcggacac
     1321 cgtcacccta acgttcgagg tgagcaacaa cggcgggggc tacgtggacg tcacctccac
     1381 cgtggacccc gtcctgctgg gcaccatcac ggcgcagagc accggggcca tcacccgctc
     1441 ctaccggatt cccctgacca ccgtggggac gggcccctgg gtggtgcgcg tctcccgcgt
     1501 caccgtggac aacaacggca cctaccgcga taaccgggta tacctccagt cctgggccgc
     1561 catcaccgag cagcagctcc gctacccccg cacgtccctc ctggcgttct cgtgcgatgc
     1621 caagcggttc tcctccatgc ccaaggtctc catcaaggtc cggggcatca aggtccaggt
     1681 gccggccaac tacacccccg ccacccggga tcccgacacc ggggtgtgga cggcggcgac
     1741 ctacgccacc accgggcccg gcaccacggg gggttcctgg gacggcacgt tcaaggcctc
     1801 gtggacctcc aacccggcct ggatcctcta cgacctcgcc acc
//
LOCUS       DATGWW010000338         2910 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_24921, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000338 DATGWW010000000
VERSION     DATGWW010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2910
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24921"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..1003)
                     /gene="aguB"
                     /locus_tag="VK150_04935"
     CDS             complement(149..1003)
                     /gene="aguB"
                     /locus_tag="VK150_04935"
                     /EC_number="3.5.1.53"
                     /inference="COORDINATES: protein motif:HMM:TIGR03381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0050126 - N-carbamoylputrescine amidase
                     activity [Evidence IEA];
                     GO_process: GO:0009446 - putrescine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoylputrescine amidase"
                     /protein_id="HLP30684.1"
                     /translation="MSPAKIVRVAATQCAFTGSLDANVAHVEALVREAAAKGAQVILP
                     SELFEGVYFCREEKDEFFDWAKPVEGHPTLTRFQKLAKELGVVIPVSFFERDGHAFYN
                     SLAMVDADGGMLGVYRKSHIPDGPGYEEKFYFRPGNTGFKVWDTRFGRLGVGICWDQW
                     YPECARAMMLMGAEILLYPTAIGTEPENPGLDTKDLWQRAMIGHAVSNVVPVVASNRI
                     GTEGGQTFYGHSFISDHRGEKVAELGRTDTGVITADVDLDEIRRNRASFGFFRDRRPD
                     LYGLISKP"
     gene            complement(1000..2025)
                     /locus_tag="VK150_04940"
     CDS             complement(1000..2025)
                     /locus_tag="VK150_04940"
                     /inference="COORDINATES: protein motif:HMM:NF016274.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HLP30685.1"
                     /translation="MNPSPLLQPAEWDRHSACWLAWPSHRHLWRENLARAQAEWAALC
                     LAIAEQGGEALEVLVQDDAAEAAARADLAPVLGQVRFHRVPVGDIWLRDTAPIFVKDV
                     DGRLQAACFRFNGWGGKYVLPEDDRVAGRVAAQSGLPRRDQDWILEGGSVEVDGEGTI
                     LTTRQCLLNPNRNPGLVQAELEAALTLGLGARKVLWLDEGLLNDHTDGHIDTLARFVA
                     PGVVVCMQALDGDDPNATALDQIAADLAALTDARGRKLQVVRIPSPGLVPDEEGEPMP
                     ASYVNFYIGNRTVVVPTYGTPHDEAAVAALAPLFPGRRVLGRSARAILSGGGAFHCIT
                     QQQPEVL"
     gene            2180..>2910
                     /locus_tag="VK150_04945"
     CDS             2180..>2910
                     /locus_tag="VK150_04945"
                     /inference="COORDINATES: protein motif:HMM:NF014215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HLP30686.1"
                     /translation="MTLSRVLRASALAVLLLGWSNPPALAQRPRNAEALAAEVRDRYD
                     KREELIPMRDGVKLFTAIYTPKDTRRTYPFLMQRTPYSVWPYGEEAFPPGLGPSARFQ
                     EEGFIFVYQDVRGRMMSEGDFVNMRPQKAVSGDRVDEATDTYDTIEWLLKHVKGNNGR
                     VGQWGISYPGFYTAVGMLSGHPALKAVSPQAPIVDWFQGDDFHRNGALWLPHAFNFMV
                     TFGKPRSGPGKAWPPRFDHGTSDGY"
BASE COUNT          464 a         1000 c         1009 g          437 t
ORIGIN      
        1 gacgagaacc tcgcgcgggt gggccacaat gcgacggcca ccgcggaaat ggcccgcacc
       61 gtctcagagg tcgcccgcac cgcggccgaa ctggcccggg tggccgacga ccagaaccac
      121 caggtggggc agttccgggt ctaggggttc agggtttcga gatcaggccg tacaggtcgg
      181 ggcgccggtc ccggaagaag ccgaaggagg cccggttgcg ccggatctca tccaggtcca
      241 cgtccgcggt gatgaccccc gtgtccgtgc gtcccagctc cgccaccttc tcgccgcggt
      301 gatccgagat gaaggaatgg ccgtagaagg tctggccgcc ctccgtgccg atgcggttgg
      361 aggccaccac cggaaccacg ttggagaccg catgcccgat catggcccgc tgccaaaggt
      421 ccttggtgtc gaggcccggg ttctccggct cggtgccaat ggcggtgggg tagagcagga
      481 tctcggcgcc catgagcatc atggcccggg cgcattccgg gtaccactgg tcccagcaga
      541 tgcccacgcc caacctgccg aagcgggtgt cccacacctt gaagcccgtg ttgccgggac
      601 ggaagtagaa cttctcctcg tagccggggc cgtcggggat gtggctcttg cggtagacgc
      661 ccagcatccc gccgtcggcg tcgaccatgg cgaggctgtt gtagaaggcg tggccgtccc
      721 gctcgaagaa ggagacgggg atcaccacgc ccagttcctt cgccagcttc tggaaccgcg
      781 tgagggtggg atgcccttcc acgggtttcg cccagtcgaa gaattcatcc ttctcttcgc
      841 ggcagaagta gacgccttca aacagctccg agggcaggat cacctgggcg cccttggccg
      901 cggcctcgcg cacgagggct tcgacgtggg ccacgttggc gtcaaggctg ccggtgaagg
      961 cgcactgggt ggcggcgacg cggacgatct tcgcggggct cacaggacct ccggctgctg
     1021 ctgggtgatg cagtggaagg caccgccccc gctgaggatg gcacgggcgg agcgacccag
     1081 cacccggcgg cccgggaaca ggggtgccag ggccgccacg gccgcctcat cgtgcggggt
     1141 gccgtacgtg ggcaccacca cagtgcggtt gccgatgtag aagttcacgt agctcgccgg
     1201 catgggctcg ccttcctcgt ccggcaccag gccgggcgag gggatccgca ccacctggag
     1261 cttccggccc cgggcatccg tgagggcggc caggtccgcg gcgatctggt cgagggcagt
     1321 ggcgttcggg tcgtccccgt ccagggcctg catgcagacc acgacccccg gggccacgaa
     1381 gcgggcgagg gtgtcgatgt ggccgtccgt gtggtcgttg agcaggccct cgtcgagcca
     1441 gagcaccttc cgggcaccca ggcccagggt gagggccgct tccagctccg cctggaccag
     1501 gccggggttg cggttgggat tgagcaggca ctggcgggtg gtgaggatgg tgccttcacc
     1561 atcgacctcc acggaaccac cctcgaggat ccagtcctgg tcgcgccggg gcaggccgct
     1621 ctgggccgcc acgcgcccgg ccacgcgatc gtcctccggc agcacgtact tgccgcccca
     1681 gccgttgaac cggaagcagg cggcctggag ccggccatcg acatccttca cgaaaatggg
     1741 agccgtatct cgcagccaga tgtcgcccac gggcacccgg tggaatcgga cctggcccag
     1801 caccggggcc aggtccgcgc gggccgcggc ctcggcggcg tcatcctgca cgaggacctc
     1861 cagggcctcg ccgccctgct cggcgatcgc caggcaaagg gcagcccact ccgcctgggc
     1921 ccgggccagg ttctcccgcc agagatgccg gtggctgggc caggccagcc agcaggcgct
     1981 gtggcgatcc cattcggcgg gctggaggag cggggaagga ttcatcgagg ggccatccgg
     2041 gcgaagcagc gcccggatcc gggcgcaccc tccagttcag caaaaggcag ccaccccgtc
     2101 gaggggaatg aatgggacag gcctggtcac cttcccgggg ataccgcgta tgatgagggt
     2161 tatctttccc ggagcaccca tgaccctctc ccgcgtcctg cgcgcctcgg ccctggctgt
     2221 cttgttgctg ggctggtcca atcctccggc gctggcacag cggccgcgga atgctgaggc
     2281 cctcgccgcc gaggtccgcg accgctacga caagcgcgag gaactgatcc ccatgcggga
     2341 tggcgtgaag ctcttcacgg ccatctacac gccgaaggac acgcgaagga cctatccctt
     2401 cctcatgcag cgcaccccct acagcgtgtg gccctacggc gaggaggctt tcccgccggg
     2461 cctgggcccc tcggcgcggt tccaggagga ggggttcatc ttcgtctacc aggacgtgcg
     2521 cggccggatg atgtctgagg gcgacttcgt gaacatgcgg ccccagaagg ccgtcagcgg
     2581 cgaccgggtg gacgaggcca cggacaccta cgacaccatc gaatggctcc tcaaacacgt
     2641 gaaggggaac aacggccgcg tcggccagtg gggcatcagc tacccgggct tctacacggc
     2701 ggtgggcatg ctctcagggc accccgcact gaaggccgtc tcgcctcagg cgcccatcgt
     2761 ggactggttc cagggcgatg acttccaccg gaacggcgcc ctctggctgc cccacgcctt
     2821 caacttcatg gtgaccttcg gcaagccgcg cagcggcccc ggcaaggcct ggccgccgcg
     2881 cttcgaccac ggcacctccg acgggtacga
//
LOCUS       DATGWW010000339         1552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_338497, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000339 DATGWW010000000
VERSION     DATGWW010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338497"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..353
                     /locus_tag="VK150_04950"
     CDS             <1..353
                     /locus_tag="VK150_04950"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HLP30687.1"
                     /translation="HRISKAVSWVRSNFDKPLDVERLATLVHMSPSSFHQHFKAVTEM
                     SPLQYQKALRLQEARRLMLLRKLDAGSAGHQVGYQSVSQFTREYGRYFGNAPTKDIAL
                     LLQKAGVESASGEQ"
     gene            553..1029
                     /locus_tag="VK150_04955"
     CDS             553..1029
                     /locus_tag="VK150_04955"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HLP30688.1"
                     /translation="MNATTSFTLNGKPVTVTSPRDRMLVWVLRDELGLTGTKVGCEAG
                     LCGACTVLVDFEAVLSCSTPLGDVAGKSVLTIEGLAHDGKLNPVQEAFQEHHAFQCGY
                     CTSGMIMAAWAFLKKKPKATRTEIVEAMEGNICRCGAHVRILDAVETAGKAMGGAR"
     gene            1026..>1552
                     /locus_tag="VK150_04960"
     CDS             1026..>1552
                     /locus_tag="VK150_04960"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HLP30689.1"
                     /translation="MRRRDFLQGVATGALTFFFATPLASAPIVPTRPATYPEDFNAYL
                     KISADGRVGCFVGKTELGQGAMTVLAMLVAEELELDPAQVDMVLGDTDLCPWDMPTGG
                     SLTMWQTAPVLRGAAAEARAVLLRMASKALGAPVSGLALKDGAIWVKDTPARRTTFGE
                     LVKGRKMERHLGKVKP"
BASE COUNT          273 a          521 c          511 g          247 t
ORIGIN      
        1 tccaccggat ctccaaggcg gtgtcgtggg tccggtccaa cttcgacaag ccgctggatg
       61 tggagcgcct ggccacgctg gtgcacatga gcccttcatc cttccaccag catttcaagg
      121 cggtcaccga gatgagcccc ctgcagtacc agaaggcgct gcgcctgcag gaggcccggc
      181 gcctcatgct gctgaggaag cttgacgccg gaagcgcggg ccaccaggtg ggctaccaga
      241 gcgtgtccca gttcacccgg gagtacgggc gctatttcgg gaacgcgccc accaaagaca
      301 ttgccctgct cctccagaag gctggcgtgg aaagcgcatc aggggagcaa tagtgggact
      361 ccagcctctg aaatcatcat gccgaacccc catgacacat ggtggcgaac gccgtctgaa
      421 gcaggccgtc acgcccccat cgagacctcc atcgagactt gaaggttcaa ccttcaatcc
      481 tcagcgcggc tcttgggcct cgggaataca atggatgatt cccacggcat gccctcgtcc
      541 cggaggttcc cgatgaacgc caccacctcg ttcacgctca acggcaagcc cgtcaccgtc
      601 acgagcccca gggatcgcat gctggtctgg gtgctgcgcg acgaactggg cctcacgggt
      661 accaaggtgg gctgcgaggc cggactctgc ggggcctgca ccgtgctggt ggacttcgag
      721 gcggtgctct cctgctccac gcccctggga gacgtggccg ggaagtcggt gctcaccatc
      781 gagggcctgg cccatgacgg gaagctgaat ccggttcagg aagccttcca ggagcaccac
      841 gccttccagt gcggctactg cacctccggg atgatcatgg ccgcctgggc cttcctgaag
      901 aagaagccca aggccacgag gaccgagatc gtcgaggcca tggaggggaa catctgccgc
      961 tgcggggccc atgtgaggat cctggacgcg gtcgaaacgg caggcaaggc catgggaggt
     1021 gcgcgatgag gcgccgggac ttcctccagg gcgtcgcgac gggcgcgctc accttcttct
     1081 tcgccacgcc cctcgcatcg gcgcccatcg tcccgacccg acccgccacc taccccgagg
     1141 acttcaacgc ctacttgaag atttcggccg acggccgcgt gggctgcttc gtggggaaga
     1201 ccgaactggg ccagggcgcg atgaccgtgc tggcgatgct cgtggccgag gagctggagt
     1261 tggatcccgc ccaggtggac atggtcctgg gcgacacgga cctgtgcccc tgggacatgc
     1321 ccaccggcgg ttcgctcacc atgtggcaga cggcccccgt cctgcggggc gctgccgcgg
     1381 aggcgcgggc cgtgctcctg cgcatggcct ccaaagccct gggcgccccg gtctcgggcc
     1441 tggccctgaa ggatggcgcc atctgggtga aggacacccc cgcgcgccgc accacctttg
     1501 gcgaattggt gaagggccgg aagatggagc ggcacctggg caaggtcaag cc
//
LOCUS       DATGWW010000340         1690 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_298618, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000340 DATGWW010000000
VERSION     DATGWW010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298618"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..684)
                     /locus_tag="VK150_04965"
     CDS             complement(<1..684)
                     /locus_tag="VK150_04965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30690.1"
                     /translation="MRTSAFLVSVLASAALAAQAPAPSLGDRVKAERPVVEKLMAEFN
                     HGEAVKRAEALLPATRPTFNKADNQTLVQSCGTFLDLAEANRLATEAADAAGAWEKAL
                     EYAKAAQSLAVECYAGVKEPFTRTVAYYNQAEARAKQVLEENDARIKELKAKTNLDPG
                     ERQELDLALGVEKEVVDCAKWVKFFQTYLDVTKRESEAYDPLVKVMEGKLKSEADQVA
                     DYKAGKGEKT"
     gene            complement(803..1624)
                     /locus_tag="VK150_04970"
     CDS             complement(803..1624)
                     /locus_tag="VK150_04970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30691.1"
                     /translation="MKPFAKDQSKNPPPKNWLDRLLRRFSRIAYGLAVLLMYALASTA
                     LGFALAPALWIWSSLQRWSPALPGALPWIVSGFTLALCFFIFGLSLLVVIPAYNWILP
                     TRIKPFKGGYYTLHALPWFLHNGLFYLVRFTFLPFVTLTPFGVWFLKAMGMKIGRHAF
                     INTEYISDPQLISIGDDAALGGSVRIFAHYGGGGNLVIAPVSVGHRATLGLACCVMGD
                     VIIGDDATILPESVLLPGSRVGAGETWGGVPARRIEREEMDRIKNEIRGMSEALG"
BASE COUNT          276 a          519 c          601 g          294 t
ORIGIN      
        1 ggtcttttca cccttgccgg ccttgtagtc ggccacctgg tcggcctcgc tcttgagctt
       61 gccttccatc accttcacga gggggtcgta ggcttcgctc tcgcgcttcg tgacatcgag
      121 gtaggtctgg aagaacttca cccacttggc gcagtcgacg acttcctttt ccacgccgag
      181 cgccaggtcc agttcctgcc gttcgccggg atccaggttg gtcttggcct tcagctcctt
      241 gatgcgggcg tcgttctcct ccagcacctg cttggcgcgg gcctcagcct ggttgtaata
      301 ggcgacggtg cgggtgaagg gctccttcac gccggcgtag cactccacgg ccagggactg
      361 ggcggccttg gcatattcca gggccttctc ccaggcgccg gcggcgtccg cggcctcggt
      421 ggccaggcgg ttggcctccg ccaggtccag gaaggtgccg caactctgga ccagcgtctg
      481 gttgtcggcc ttgttgaagg tcgggcgggt ggcgggcagc agagcctcgg cgcgtttcac
      541 cgcttcccca tggttgaact ccgccatgag cttttccacc acggggcgtt cggccttcac
      601 ccggtcgccg agcgacgggg ccggggcctg ggcggcgagg gccgcggagg cgaggacaga
      661 aacgaggaag gcggatgtgc gcatggtcca accgaaatga gaagggggat gcccccgcgg
      721 gagaaacctt cattctccag ggatcccgat ggcttgacta gccccgcggt ttcaaccaag
      781 gctggctgag ggtaagtaga tgtcacccca gggcttcgga catgccccgg atctcgttct
      841 tgatgcggtc catctcctcg cgctcgatcc tgcgggcggg aacgccgccc caggtctctc
      901 ccgcgcccac ccggctcccc ggcagcagca cgctttcggg caggatggtg gcgtcgtcgc
      961 cgatgatcac gtcgcccatg acgcagcagg cgaggcccag ggtggcgcgg tggcccacgc
     1021 ttacgggcgc gatcaccagg ttcccgccgc cgccgtagtg ggcgaagatc cggacgctgc
     1081 cgcccagcgc ggcgtcgtcg ccgatgctga tcagttgcgg gtcgctgatg tattcggtgt
     1141 tgatgaaggc gtgccgcccg atcttcatgc ccatggcctt gaggaaccag acgccgaagg
     1201 gcgtgagggt gacgaagggc aggaaggtga agcgcacgag gtagaagagt ccgttgtgca
     1261 agaaccaggg cagggcgtgc agggtgtagt agccgccctt gaacggcttg atccgcgtgg
     1321 gcaggatcca gttgtaggcg gggatgacca ccagcagcga cagcccgaag atgaagaagc
     1381 acagggcgag cgtgaacccg gagacgatcc agggcagggc gccgggaagg gccggagacc
     1441 agcgctggag ggaggaccag atccagaggg ccggggccag ggcgaagccg agggcggtgg
     1501 aggcgagggc gtacatcagc agcaccgcca ggccgtaggc gatgcgcgag aaccgccgga
     1561 gcagccggtc cagccagttc ttcggcggcg gattcttcga ctggtccttg gcgaagggtt
     1621 tcatggctcc agactaacga aagtggcagg tagcatgggg gcatggatct ggtcctgctc
     1681 cgactctccg
//
LOCUS       DATGWW010000341         2706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_298666, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000341 DATGWW010000000
VERSION     DATGWW010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2706
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298666"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2412
                     /locus_tag="VK150_04975"
     CDS             <1..2412
                     /locus_tag="VK150_04975"
                     /inference="COORDINATES: protein motif:HMM:NF013539.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HLP30692.1"
                     /translation="GHEAGELLKRLEYRGYDSTGASFIGDDGAIQLLKKVGAPSKVVP
                     ELGIDQQAGQRFIGQVRWATYGAVTDVNSQPHHVRCKVEIVGAHNGNISNTDSLKPAL
                     TAEGHAVVSDNDGEMITHLTEDAYSANLKDPSPALSACRTAYAGAGLSAAIPDGAFLL
                     MDAARKADARAEGSYAAAFADPKVPGVVAVKSGSSLYAGIGTDAHGDFVVVSSDLTSV
                     LSKTRMLIPLSEGEGIWFTEREYLVFSLGKDLAFSVPRPKRSKLNVRDTGLRAPFRYF
                     MEQEIASSPDNLDEVLRYYFRAPETEGLFAAFEDRKDLCKALVDKVLALYEAPNETAL
                     AAAFQAVLADPVHRELATRVKPHGDVLHAHRGHPFSDERQLLADLARLDPQAQEAIAL
                     FDLLFVWKKRRRVTRHLMELVQAIRETQKEGGRVFLVASGTSYHAALVAATFFNNLSG
                     VAVFPCNPGMFRSMYMNTLQARDLLVGITQSGETKDLVDIFQDVRTRVPGLRRIALVN
                     NENSRIPQELTEFYLPILCGPEIAVAATKSFINQVAILYVLAASFSLTERKIAANLER
                     AKDLIADTLRLCEGDVEEAAQRLYLEPSLHILGTGLIGLAREGALKIREVVLNHAEGY
                     DAAEFKHGPNTILGKNTLFSIQDLAGLLEVYEKQRDGRPFAGGLESLQAWPELVETRF
                     SNYPLLFVCPSEERDVRITISQIHTHKIRGADIMLIAEKQPELARAVAGRPMGHDRYW
                     SKYIEVPFSGDPNLFVFAASVALQRLAFRMSVLKMEYLDRLTVQDHGVHPDAPKNVSK
                     SITVD"
BASE COUNT          479 a          977 c          815 g          435 t
ORIGIN      
        1 ggacacgagg ccggcgagct gctcaagcgg ctcgagtacc ggggctatga ctccaccggg
       61 gcctccttca tcggcgatga cggcgccatc caactgctga agaaggtcgg ggctcccagc
      121 aaggtggtgc ccgagctggg catcgaccag caggccggcc agcgcttcat cggccaggtg
      181 cgctgggcca cgtacggcgc ggtgaccgac gtgaacagcc agccccacca cgtgcgctgc
      241 aaggtcgaga tcgtgggcgc gcacaatgga aacatctcga acacggattc gctcaagcct
      301 gcgctcaccg ccgagggcca cgcggtggtc tcggacaacg acggcgagat gatcacccac
      361 ctcaccgagg acgcctactc ggccaacctg aaagatccga gcccggccct gtcggcctgc
      421 cggacggctt acgcgggcgc cggcctgtcg gccgcgatcc ccgatggcgc cttcctcctg
      481 atggatgcgg cccgcaaggc cgacgcccgg gccgagggct cgtacgccgc cgccttcgcg
      541 gaccccaagg tgcccggcgt ggtggcggtg aaatcgggat cctcgctcta cgcgggcatc
      601 ggcaccgacg cccacggcga cttcgtggtg gtatccagcg acctcacgtc cgtgctgtcg
      661 aagacccgca tgctcatccc cctgtccgag ggcgaaggca tctggttcac ggagcgggaa
      721 tacctcgtct tcagcctggg caaggacctc gccttctccg tgccccgccc taagcggtcc
      781 aagctcaatg tgcgagacac aggcctccgc gcgcccttcc gctacttcat ggagcaggag
      841 atcgcctcct cgccggacaa cctcgacgag gtgctccgct actatttccg ggccccagag
      901 acggaaggcc tcttcgccgc cttcgaggac cggaaggacc tctgcaaggc cctcgtggac
      961 aaggtgctgg ccctctacga agcacccaat gaaacggccc tggccgcggc tttccaagca
     1021 gtgctcgccg atcccgtcca ccgcgagctg gccacccggg tgaagcccca cggcgacgtg
     1081 ctccacgccc accgggggca tccgttctcc gacgagcggc agctgctcgc cgacctggcg
     1141 cgcctcgatc cccaggccca ggaggccatc gccctcttcg acctgctctt cgtctggaag
     1201 aagcgccgcc gcgtgacccg ccacctcatg gagctggtgc aggccatccg ggaaacccag
     1261 aaagaagggg gacgcgtctt cctggtggcc tccggcacgt cgtaccacgc cgccctggtg
     1321 gccgccacgt tcttcaacaa cctctccggc gtggccgtgt tcccctgcaa ccccggcatg
     1381 ttccgctcga tgtacatgaa cacgctgcag gcgcgggatc tgcttgtcgg catcacgcag
     1441 tccggcgaga ccaaggacct ggtggacatc ttccaggacg tgcgcacccg ggtgcccggc
     1501 cttcgccgca tcgccctcgt gaacaacgag aacagccgca ttccccagga gctcaccgag
     1561 ttctacctgc ccatcctctg cggccccgag atcgccgtgg ccgccaccaa gagcttcatc
     1621 aaccaggtgg cgatcctcta cgtgctggcg gcctccttct cgctcaccga gcgcaagatc
     1681 gccgcgaacc tcgagcgcgc gaaggacctc atcgccgaca ccctgcgcct ctgcgaaggc
     1741 gatgtggagg aagccgccca gcggctgtac ctcgagcctt ccctgcacat cctgggtacc
     1801 ggcctcatcg gcctggcccg ggaaggggct ctgaagatcc gcgaagtggt gctgaaccac
     1861 gcggagggct acgacgccgc cgagttcaag cacggcccca acaccatcct cgggaagaac
     1921 acgctgttct ccatccagga cctggcgggc ctgctggaag tctacgaaaa gcagcgcgac
     1981 ggccgcccct tcgccggcgg gctcgaatcc ctgcaggcct ggccggagct ggtggagacg
     2041 cggttctcga actaccccct gctcttcgtg tgccccagcg aggagcgcga cgtgcgcatc
     2101 accatcagcc agatccacac ccacaagatc cgcggcgccg acatcatgct catcgccgag
     2161 aagcagcccg agctggcccg ggccgtggcc ggccggccca tgggccacga ccgctactgg
     2221 tcgaagtaca tcgaagtgcc cttcagcggg gacccgaacc tcttcgtctt cgccgcgtcc
     2281 gtggcccttc agcgcctggc cttccgcatg tcggtcctga agatggagta cttggaccgc
     2341 ctgaccgtgc aggaccacgg ggtgcacccg gacgccccga agaacgtctc caaatccatc
     2401 acggtagatt aaattaaacg aaataaacta tttaccgatc gttcgatatt taaaaagaaa
     2461 atcagacctt tttagtctgc attgtgatgc ccttcacacc gtttctgctc catcttggga
     2521 tccgggacgc attcccctgg aggcttcatg accgtcgatc tcaacaccaa ggtgggcgac
     2581 ctggtgctgg cctggcccca ggccatgcgc tacctcgaga gccagggcgt ggactactgc
     2641 tgcggcggcc accggtccct ccaggaggcc tgcgacgtgg caggccggcc ggcccaggag
     2701 gtcctc
//
LOCUS       DATGWW010000342         1786 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_251230, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000342 DATGWW010000000
VERSION     DATGWW010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1786
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251230"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(198..1424)
                     /locus_tag="VK150_04980"
     CDS             complement(198..1424)
                     /locus_tag="VK150_04980"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HLP30693.1"
                     /translation="MRVAVFHPAFESVGGAEILAAAQAAFYRDQGVAPDLVTLGYDAN
                     RWASRLTGIPIRVVVKRHWTDLFRGWGRIGKLQARGRRAADILGDYDVVVAHNFPAST
                     MLGAAPIRARKIWQCNEPPRGIHLREANPILTARVEAVGGDCLDEATRQFQNVLAKHD
                     RSMGRSSTALARRTFDLASAGKLDQIYAISEFSRDNARRIYGRCDEQVIYPIVRFPQG
                     GRNRQGLERSVRRVLVHSRLEVLKNIDTVIRGFGAFARRSPVPCELHVVGEGPCRERL
                     EALARASCPRDSVTFHGYLSEDDLRRVYEACDAFALLTLDEPFGMVYPEAAAKGLLMV
                     GPDHGGPREILDDGRLGWTIDAFSPDALGEALAEIWSLDDAEVDRRRSAADAACRDRF
                     GMAAIGPKLLSLVGRS"
     gene            1566..>1786
                     /locus_tag="VK150_04985"
     CDS             1566..>1786
                     /locus_tag="VK150_04985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30694.1"
                     /translation="MARRFHIAFGHHKLSYGGGERVLIEQVAALADLPVDISLVYMAD
                     PEHLDILPELRDRNPNLREIKHAPGKWDCL"
BASE COUNT          328 a          621 c          562 g          275 t
ORIGIN      
        1 cccaccccat cccccctcgg gtatgccctc gcccagacgg tggcgctggg accaaccctc
       61 cggggcctga gcatccaagg atggcgtcga gaagatcatc cccaaggcag acaggctgaa
      121 gcgcacaagg gtcacgcgaa aacagggcac cacgcatcca ccagttcgtc gggaggtcgg
      181 ggaatcagaa caggcgacta ggacctgccc accaggctca acagtttggg gccaatcgcc
      241 gccattccaa aacggtccct gcacgccgcg tccgcggcgg acctccggcg atcaacctca
      301 gcatcatcca gcgaccagat ctccgccaag gcctcgccca gcgcatccgg cgaaaaggca
      361 tcgatggtcc agccgagacg cccgtcgtca agaatttcgc ggggaccgcc atgatccgga
      421 cccaccatca acaagccctt ggcggcggct tcggggtaga ccatgccgaa tggctcgtcg
      481 agggtgagca gggcgaaggc atcgcaggcc tcgtaaaccc ggcgcaggtc atcctccgac
      541 aagtagccgt gaaacgtgac ggagtcgcgg ggacaggagg cccgggccaa tgcttcgagc
      601 cgttcccggc agggcccctc ccccaccacg tgcagttcgc aaggcaccgg gctacgccgg
      661 gcgaaggcgc caaatcccct gatcaccgtg tcgatgttct tcagcacttc cagccgggaa
      721 tgaaccagga ccctccggac gctgcgttcc agcccctgcc ggttgcggcc cccctggggg
      781 aatcgcacga tggggtagat cacctgctcg tcgcagcggc catagatgcg ccgggcgttg
      841 tcccgagaga attcactgat ggcgtagatc tgatcgagct ttccggcgga agccaggtcg
      901 aaggtgcgtc gggccagggc cgtggacgac cgccccatgc tccggtcgtg cttcgccagg
      961 acattctgga attgcctggt cgcctcgtcc aggcaatctc cacccacggc ttccactcgc
     1021 gcagtcagaa tggggttggc ctcacggaga tggatgcccc tgggaggttc gttgcactgc
     1081 caaatcttcc gggcgcggat gggcgccgcg cctagcatgg tgctggccgg aaagttgtgc
     1141 gccaccacca cgtcgtagtc cccgaggatg tcggcggcgc gccggccgcg cgcctggagt
     1201 ttgccgatcc ggccccagcc ccggaagaga tcggtccagt gccgcttgac caccacccgt
     1261 atgggaatgc ccgtcagccg tgaagcccag cggtttgcgt cgtacccgag ggtcaccagg
     1321 tctggtgcca cgccctggtc gcgatagaag gcggcctggg ccgcggccag aatctcggct
     1381 ccgcccaccg actcgaaggc tggatggaac accgccacgc gcatggatac ctcaggatcc
     1441 ctcgactgta gcaggtggct ggacggcccc gggctcggcc tgggatgcta gggttgcttg
     1501 caatcgggca ttcccagccg cggccagcat ccgctgcagg gcccagcctc tccgacgggt
     1561 cagccatggc acgacgtttc cacatcgcct tcgggcacca caagctctcc tacggcggag
     1621 gcgagcgtgt gctcatcgag caggtggccg ccctggccga cctgcccgtg gacatcagcc
     1681 tcgtctacat ggcggatccg gaacacctgg acatcctccc ggaactgcgc gaccggaatc
     1741 caaaccttcg cgagatcaag cacgccccgg gcaagtggga ctgcct
//
LOCUS       DATGWW010000343         2024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_72022, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000343 DATGWW010000000
VERSION     DATGWW010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72022"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VK150_04990"
     CDS             complement(<1..524)
                     /locus_tag="VK150_04990"
                     /EC_number="1.13.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class III extradiol ring-cleavage dioxygenase"
                     /protein_id="HLP30695.1"
                     /translation="MKDAARLPSLFIAHGSPMLALEGGAWGGMVAGLRATLGTPKAIL
                     VASAHWEAPGPFRLSSAETPGVMHDFGGFPEALYALDYPAPGAPALAARAVDLLRESG
                     LQATLDAQRPLDHGAWVPLRYLAPDADIPVVQLSLPRPRTPEQLLAAGRALAPLRAEG
                     VLILGSGGIVHNLGR"
     gene            652..1380
                     /locus_tag="VK150_04995"
     CDS             652..1380
                     /locus_tag="VK150_04995"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: protein motif:HMM:NF003625.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HLP30696.1"
                     /translation="MNLRLGVNVDHVATLRQARGGHEPEPVAAALLAQSAGAHGITVH
                     LRADRRHIQDRDLRLLKEVLAIPLNVECAATPEALEAVIPAKPSWVTLVPESREELTT
                     QGGLDAIFLQGMLKPILRELRGAGIRVSLFVDPVLDQVKMAAKLEADAVELNTGVYAD
                     LPMDSDATQELGRLRDAARLASRLGMRVLAGHGLTLHNVGPVAAIPEVEELNIGHSLV
                     GRAVLVGLERAVEEMLAAMVEMRP"
     gene            1377..1754
                     /locus_tag="VK150_05000"
     CDS             1377..1754
                     /locus_tag="VK150_05000"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30697.1"
                     /translation="MSTVLVVDDDPCVRQILREFVELEGHRVLEAEDASHARQAMAQE
                     RVDLIFLDVLMPGETGMAFCHSIKDDPECQGIKVILLTGFDGERAWQQGLRSGADIFL
                     VKPVNHERIKVLLEELLSPEGQA"
     gene            1751..>2024
                     /locus_tag="VK150_05005"
     CDS             1751..>2024
                     /locus_tag="VK150_05005"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HLP30698.1"
                     /translation="MSNLRGTLESISLTDVAQLLHVNRKTGMLQVSSGKVSGVLYFSM
                     GEVIHAETLSSRGESAAFEILEWITGHFEFLTTQVQVQATIRRTVPD"
BASE COUNT          332 a          695 c          703 g          294 t
ORIGIN      
        1 cgcccgaggt tgtgcacgat gccgccgctg ccgaggatca gcacgccttc ggcccgcagc
       61 ggcgccaggg cccggcccgc cgccagcagc tgctcgggag tccggggccg gggcagcgaa
      121 agctgcacca cggggatgtc cgcatctggc gccaggtagc gcaggggcac ccaggcgccg
      181 tggtccaggg gacgctgggc gtcgagggtc gcctgcaggc ccgactcccg tagcaggtcc
      241 acggcccggg ccgccagggc gggtgcgccg ggggccgggt agtccagcgc gtagagggct
      301 tccgggaagc cgccgaaatc atgcatgacg ccgggggttt cagcggagga gagacggaag
      361 gggcccgggg cctcccagtg cgccgaggcc acgagaatgg ccttcggcgt tcccagcgtg
      421 gcgcggaggc cggccaccat gccgccccag gccccgccct ccagcgccag catgggcgag
      481 ccgtgagcga tgaacagaga ggggagacgg gccgcatcct tcatgaatct aggatgggca
      541 tccaatttag atgtttcaac tctttttttc gaaaatgcgc cctgccctcc caaccttcgc
      601 ggcgcgggac gcgcgcagag gttaagctag ggggcattcc cggagaccgc gttgaatctg
      661 aggcttggcg tgaacgtcga ccatgtggcc accctgcggc aagcccgcgg aggccatgag
      721 cccgagccgg tggccgcggc cctcctggcc cagagcgccg gagcccacgg catcacggtc
      781 cacctgcggg cggaccgtcg acacatccag gaccgtgacc tccgcctgct gaaggaagtc
      841 ctcgccattc ccttgaacgt ggaatgcgcc gccacgcccg aagcgctcga ggcggtcatc
      901 cccgccaagc cctcctgggt gaccctcgtg cccgagagcc gggaggagct caccacccag
      961 ggcggcctgg acgccatctt cctccagggc atgctgaagc ccatcctgcg ggagctgcgc
     1021 ggcgccggca tccgggtgag ccttttcgtg gatccggtgc tcgaccaggt gaagatggcc
     1081 gccaagctcg aggccgacgc cgtcgagctg aacaccggcg tctacgccga cctgcccatg
     1141 gattcggacg ccacccagga gctgggccgc ctccgtgacg ccgcccgcct ggccagccgc
     1201 ctgggcatgc gggtgctggc cggccatggc ctgaccctcc acaacgtggg ccctgtggcc
     1261 gccattcccg aggtcgagga attgaacatc ggccacagcc tggtcggccg ggcggtcctg
     1321 gtgggcctgg aacgggccgt cgaggagatg ctggccgcca tggtggagat gcgcccatga
     1381 gcaccgtgct ggtcgtggac gacgacccct gcgtccgcca gatcctccgg gaattcgtgg
     1441 aactggaggg gcaccgggtc ctggaggcgg aggacgcctc gcacgcccgg caggccatgg
     1501 cccaggagcg ggtggacctg atcttcctgg atgtgctcat gccgggcgag acgggcatgg
     1561 ccttctgcca ttccatcaag gatgatcccg agtgccaggg catcaaggtg atcctcctca
     1621 ccggcttcga cggggagcgc gcctggcagc agggcctccg cagcggggcc gacatcttcc
     1681 tggtcaagcc cgtgaaccat gagcggatca aggtcctgct cgaggaactg ctctcacccg
     1741 agggccaggc atgagcaatc tgcggggcac cctggaaagc atctccctga ccgatgtggc
     1801 gcagctcctg cacgtcaacc ggaaaaccgg catgctccag gtgagttcgg gcaaggtgag
     1861 cggggtcctc tacttctcca tgggagaggt catccacgcg gagaccctct cgtcccgagg
     1921 ggaatccgcc gccttcgaga tcctggagtg gatcacgggg cacttcgagt tcctgacgac
     1981 ccaagtccag gtccaggcca ccatccgccg caccgtgccg gacc
//
LOCUS       DATGWW010000344         1742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_299256, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000344 DATGWW010000000
VERSION     DATGWW010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299256"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..411)
                     /locus_tag="VK150_05010"
     CDS             complement(<1..411)
                     /locus_tag="VK150_05010"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF014183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HLP30699.1"
                     /translation="MNTRDLLIELGTEELPPKALKTLSEAFLAGVRDGFQKAGVEFAS
                     IVPFATPRRLALLAKGVAERQPDKVVERRGPAVNAAFNEEGLPTKALQGFAASCGVTV
                     EQLETVETDKGKWLVHRSNQPGRATAELIPDIVRG"
     gene            complement(408..1325)
                     /gene="glyQ"
                     /locus_tag="VK150_05015"
     CDS             complement(408..1325)
                     /gene="glyQ"
                     /locus_tag="VK150_05015"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR00388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HLP30700.1"
                     /translation="MTTTTARDVRTFQGLILALQEYWAQQGCVILQPLDMEVGAGTFH
                     PATFLRSIGPEPWAAAYVQPSRRPADGRYGENPNRLQHYYQFQVVIKPSPMEIQELYL
                     GSLRMLGIDTSVHDIRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCK
                     PVTGEITYGLERIAMYLQGVESVFDLVWADGPFGRITYGDVYHQNEVEQSTYNFEHAD
                     VKNLFGQFDHYEQQSNNLIAAGLPLPAYEMVLKASHTFNLLDARKAISVTERQRFILR
                     VRALARAVAQAYYDRRAALGFPMLKEGAK"
     gene            1454..>1742
                     /locus_tag="VK150_05020"
     CDS             1454..>1742
                     /locus_tag="VK150_05020"
                     /inference="COORDINATES: protein motif:HMM:NF015042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30701.1"
                     /translation="MTQRKAVALISGGLDSMLAAKVVLEQGVHVEGINFFTGFCVEGH
                     THAIRNKDQHKPKRNNALWVAEQLGIKLHIVDIVDEYKDVLLNPRYGYGANL"
BASE COUNT          299 a          531 c          617 g          295 t
ORIGIN      
        1 gccgcgaacg atgtcgggga tcagctcggc ggtggcgcgg cccggctggt tgctccggtg
       61 gacgagccac ttgcccttgt cggtctcgac ggtttcgagc tgctcgacgg tgacgccgca
      121 cgaggcggcg aagccctgca gcgccttggt gggcagacct tcttcgttga aggcggcgtt
      181 cacggcggga ccgcggcgct cgacgacctt gtcgggctgg cgttcggcga cacccttcgc
      241 gagcagcgcg agacggcgcg gcgtggcgaa ggggacgatc gaggcgaatt cgacgcccgc
      301 cttctggaag ccgtcgcgca cgccagcaag gaatgcttca gagagggtct tgagcgcctt
      361 cggaggcagc tcttcggtgc ccagttcgat caggaggtca cgggtgttca tttcgcgccc
      421 tccttcagca tggggaagcc gagcgcggcg cggcggtcgt agtaggcttg ggcgacggcg
      481 cgggcgaggg cgcgcacgcg caggatgaag cgctggcgct cggtcaccga gatcgctttg
      541 cgcgcatcca gcaggttgaa ggtgtgcgac gccttcaaca ccatttcata ggcgggcaac
      601 ggcaggccgg cggcgatgag gttgttgctc tgctgttcgt agtggtcgaa ctggccgaag
      661 aggttcttca cgtccgcgtg ctcgaagttg taggtggact gctccacctc gttctggtgg
      721 tagacgtcac cgtaggtgat gcggccgaag gggccgtcgg cccagaccag atcgaagacg
      781 ctctccacgc cctggaggta catggcgatg cgttcgaggc cgtaggtgat ctcgccggtg
      841 acgggcttgc agtcgatgcc gcccacctgc tggaagtagg tgaactgggt gacctccatg
      901 ccgttgagcc acacctccca gccgaggccc caggcgccca gggtggggga ttcccagttg
      961 tcctccacga accggatgtc atggaccgag gtgtcgatgc ccagcatgcg cagggagccg
     1021 agatagagct cctggatctc catgggggag ggtttgatca ccacctggaa ctggtagtag
     1081 tgctggaggc ggttggggtt ctcgccataa cgaccgtccg ccgggcggcg ggagggctgc
     1141 acataggcgg cggcccaggg ctcgggcccg atggagcgca ggaaggtggc cgggtggaag
     1201 gtgccggcgc ccacttccat gtcgaggggc tggaggatga cgcagccctg ctgggcccaa
     1261 tactcctgca gggccaggat cagcccctgg aaggtgcgca cgtcgcgcgc ggtggtggtg
     1321 gtcaaggtgg aaaccctaaa gtgtccggaa gccgaccatt ataaccgccg tggccccctt
     1381 ctacacaggc gcgtgagtgc cgcgaccggc gggttttagg taaactgcgg ctccctcagc
     1441 cgcgccccac gccatgaccc agagaaaagc cgtcgccctc atctccgggg ggctcgattc
     1501 catgctcgcc gccaaggtgg tcctcgaaca gggggtccac gtggagggga tcaacttctt
     1561 caccggcttc tgcgtggaag ggcacaccca cgccatccgc aacaaggacc agcacaagcc
     1621 caagcgcaac aacgccctct gggtggcgga gcagctgggc atcaagctcc acatcgtcga
     1681 catcgtggac gagtacaagg acgtgctgct gaacccgcgc tacggctacg gcgcaaacct
     1741 ca
//
LOCUS       DATGWW010000345         1730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_148942, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000345 DATGWW010000000
VERSION     DATGWW010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148942"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1643
                     /locus_tag="VK150_05025"
     CDS             <1..1643
                     /locus_tag="VK150_05025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30702.1"
                     /translation="PERADVIDSAGNLVHHKQTPHYFSARQAGSLETLGLNPLRLTFQ
                     GVGTPDPEMQRVRQVSSVFNEVLKGKIPLYFNFGAYHYTAGNQVFGSAFSVSSSAATF
                     HFAPGDYLAYATRGPMSNLDSLPIKAFDGQLNTVHTFIVVPPTLPAGWTTFDVPSPTQ
                     ATTGGFNPGEMLSSALAEGVQVVARTEEDMLTDPAALRSEFRSEIETTAISDAQRAPV
                     GNDPFVVGARSATLSDGFATALFTPAPTGHRNGGARPSKGWNLADFITQAEGGYTVVH
                     QPRGAKGLFTVRAFDRTVPLGTGVNAWWTQTGPASLGKRLGDFDALELLRAEGCNPAD
                     PTAWYAEFTQVRDDWYALLNQQAPGAFTKGLGLSAARFSLDTPVGLSRTYLNVGEAFS
                     QDNLSPVLKALRNGAAVASTGPLVIATVDGVGPGGLATTTTSSVSLTILLHAPDWVPV
                     DEVRVVVNGAAPINVPLASFTPSATVAGLRTAVVTVPLPAGKDAWLVVEAGVARTQTG
                     PYAAGTPWNKIMKGIYPIAVTNPIFVDANGGGYTPPGL"
BASE COUNT          280 a          598 c          542 g          310 t
ORIGIN      
        1 gccccgaacg ggctgatgtc atcgactccg cgggcaacct tgtacatcac aaacagacgc
       61 cccactattt cagcgctcga caggcgggat cgttggaaac gcttgggttg aacccgctac
      121 gcctcacctt ccagggagtc ggcacacctg acccggagat gcagcgggtc cgacaggttt
      181 ccagcgtctt caacgaagtc ctgaagggca agatccctct ctatttcaat ttcggggcct
      241 atcactacac cgccggcaac caggtgtttg gctcggcttt cagcgtcagt tcgtctgctg
      301 ccaccttcca tttcgcgccc ggggattatc tggcctacgc cacccgcggc cccatgtcca
      361 acctcgactc attgcccatc aaggccttcg atggccagtt gaacacggtc cacaccttca
      421 tcgtggtgcc gccgaccctt cctgcgggtt ggaccacctt cgatgtgccc tcccctaccc
      481 aggccaccac gggaggcttc aatcccggag agatgctgag ttcggccctg gccgaagggg
      541 tccaggtggt tgcccgcacg gaagaggaca tgctcacgga ccctgcggcc ttgcgttcgg
      601 agttccggtc cgagatcgaa accacagcga tctccgacgc tcagcgtgcc cccgtgggca
      661 acgatccctt cgtggtgggt gcccgcagcg ccaccttgtc tgatggcttc gccacggccc
      721 tcttcacgcc ggcgccgaca gggcaccgca acggcggggc ccggccctcc aagggctgga
      781 acctggcgga tttcatcaca caggccgagg gcggctacac ggtggtccac cagccccgcg
      841 gcgccaaggg actcttcacg gtgcgcgcct tcgatcgcac ggtgccgctt gggacgggtg
      901 tcaacgcttg gtggacccag acgggtcccg cctccctcgg caagcgcctg ggcgatttcg
      961 acgccctgga gctgctccgg gccgaaggtt gcaatccggc ggaccccacg gcctggtatg
     1021 cggaattcac ccaggttcgc gacgactggt acgcccttct gaaccagcag gccccgggag
     1081 ccttcaccaa gggcctgggc ctgtccgccg cccggttcag cctggacacc ccggtaggcc
     1141 tgtcccgcac ctacctgaac gtgggtgagg cgttcagcca ggacaacctg agtcccgtgc
     1201 tcaaggcgtt gaggaatggc gccgccgtgg cctccacggg gcccctggtg atcgcgacgg
     1261 tggatggtgt gggtcccggc gggctcgcca ccacgacgac atcgagcgtg agcctcacca
     1321 ttctcctgca cgcgcctgac tgggttcccg tggatgaggt gcgggtggtg gtgaacggtg
     1381 cggcgcccat caatgtgcct ctggccagct tcacaccctc cgcgacggta gccggtctcc
     1441 ggacggccgt cgtcaccgtg ccgctgcccg cgggcaagga tgcctggctg gtggtggagg
     1501 ccggcgtggc ccggacccaa acgggcccgt acgccgccgg aacgccctgg aacaagatca
     1561 tgaagggcat ctatcccatc gccgtcacca atcccatctt tgtggatgcg aatggcggcg
     1621 ggtacactcc tcccgggctc taacctaagc aggggtggtg atggcggact ggcttccgga
     1681 acggcttccg gaggatatcg acgcggagcg gtcgttcctg gcgacctgct
//
LOCUS       DATGWW010000346         2135 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_252102, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000346 DATGWW010000000
VERSION     DATGWW010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252102"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..243)
                     /locus_tag="VK150_05030"
     CDS             complement(<1..243)
                     /locus_tag="VK150_05030"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30703.1"
                     /translation="MRAPTTILLVDDEPGIRRSLGEALKDEGYHVVKAERGEQAIDLL
                     HNPDGEGLHLILLDVWLPGQDGLETLKQAKQIRPDLP"
     gene            complement(291..878)
                     /locus_tag="VK150_05035"
     CDS             complement(291..878)
                     /locus_tag="VK150_05035"
                     /inference="COORDINATES: protein motif:HMM:NF014651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HLP30704.1"
                     /translation="MTLALQADLAQILAEAFLEPDADLKDGLGELLDADPVPALAEPL
                     SGMVRHAIAPQDQPVEYTRLFLHAQATDTVHLFESVQARGHHMAPEVLEPLKAIYDAA
                     DISLQEDLSVPPDHLGLEFACLSYLVGQVIEGDLSERTQFRDLALRLIRDHLRPFVQA
                     VSEQLAQVSPHPYYRAASDLAVALLPETEKALAEI"
     gene            complement(889..1869)
                     /gene="nrfD"
                     /locus_tag="VK150_05040"
     CDS             complement(889..1869)
                     /gene="nrfD"
                     /locus_tag="VK150_05040"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HLP30705.1"
                     /translation="MHEFNWGLLIVVYLFLGGLSAGLFFAAGLANYLEVDGQPAYPRI
                     ARMGALLAPWPVAIGSGLLILDLGNWYRFYKLFTHFRWESPMSIGSYLLTFFTLIAFV
                     YAFAWLPEDWRQQLFAKVPATWKQVHRLNVDLSAHRKVIAMVGFPFAIGVGIYTGVLL
                     GAVSARPFWNTNLVAQMFLFSALSSGAAALLLAMVLDRRNPIETHETKFLITLDIVFI
                     VLELFIILPYLIHGTLSVLAVKQALWLILGGPYTLVFWVFFLGLGLLAPLGIEVYELA
                     PSLFKGHAFHGSRNLALAASSLVLVGGFLLRYIFVYAGQLSSFHKMGMLH"
     gene            complement(1879..>2135)
                     /locus_tag="VK150_05045"
     CDS             complement(1879..>2135)
                     /locus_tag="VK150_05045"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HLP30706.1"
                     /translation="CMVACPYDARYFHEESGTVHKCTLCSHRVDKGDVPACVETCPSK
                     VRVFGDLEDPTSRIHELLATRRHRVKEPQTGNGPQLYYLL"
BASE COUNT          386 a          616 c          798 g          335 t
ORIGIN      
        1 cggcaggtcc gggcggatct gcttggcctg cttgagggtc tccagcccgt cctggccggg
       61 cagccacacg tccagcagga tgaggtgcag gccctcgcca tcggggttgt gcagcaggtc
      121 gatggcctgc tcgccgcgct cggccttcac gacatggtag ccctcgtcct tcagggcttc
      181 gcccagggac cgccggatgc ccggctcgtc atccaccagg aggatggttg tgggggcgcg
      241 catgccttca tgctggacgc ggggcaagcc tttgtccagc aggtggttgc ctagatttcc
      301 gccaatgcct tctccgtttc gggcaggagc gccacggcca ggtccgaggc ggcgcggtaa
      361 tagggatgcg gggacacctg ggccaactgc tccgacacgg cctggacgaa gggccggagg
      421 tggtcccgga tgagccgcag ggccaggtcc ctgaactgcg tgcgttcgga gaggtcgcct
      481 tcgatcacct ggcccaccag gtagctcagg caggcgaact ccaggcccag gtggtcggga
      541 ggcacgctca ggtcctcctg gaggctgatg tcggcggcgt cgtagatggc cttcaacggc
      601 tccagcacct cgggggccat gtggtggccc cgggcctgga cggattcgaa gagatggacc
      661 gtgtccgtgg cctgggcgtg gaggaagagc cgggtgtatt ccaccggctg atcttggggc
      721 gcgatggcat gccgcaccat gccggagagg ggttcggcga gggcggggac agggtccgcg
      781 tcgagcagct cgccgagacc gtccttcagg tcggcatccg gctccaggaa ggcttcggcg
      841 aggatctggg cgaggtccgc ctggagcgcg agtgtcatgg gaggtccctc agtgcagcat
      901 ccccatcttg tggaagctgc tcagctgtcc agcgtagacg aagatgtagc ggagcaggaa
      961 gccgcccacg agcacaaggc tggaggcggc cagggccagg ttgcgacttc cgtggaaggc
     1021 gtggcccttg aagaggctgg gggccagctc gtagacctcg atgccgaggg gcgccagcag
     1081 gccaaggccc agaaagaaga cccagaagac cagggtgtag ggaccgccca ggatgagcca
     1141 cagggcttgc ttcaccgcca gcaccgacag ggtgccgtgg atgaggtagg gcaggatgat
     1201 gaagagttcc agcacgatga agacgatgtc gagggtgatg aggaacttcg tctcgtgggt
     1261 ctcgatgggg ttgcggcggt ccagcaccat ggcgagcagc aaggcggcgg cgccgctgga
     1321 gagggcggag aaaaggaaca tctgggccac caggttggtg ttccagaagg ggcgagcaga
     1381 aactgcgccc agcagcacgc cggtgtagat gcccacgccg atggcgaagg ggaatccgac
     1441 catcgcgatg accttgcggt gggcggagag gtccacgttc aggcggtgca cctgcttcca
     1501 ggtggcaggc accttggcga acagctgctg gcgccagtcc tcgggcagcc aggcgaaggc
     1561 atagacgaag gcgatgaggg tgaagaaggt caggaggtag gagccgatgg acatggggct
     1621 ttcccaccgg aagtgggtga acagcttgta gaaccggtac cagttcccca ggtcgaggat
     1681 gagcaggccg gacccgatgg cgacgggcca gggtgccagg agggcgccca tgcgggcgat
     1741 gcgcggatag gccggctgac cgtccacctc caggtagttg gccagacccg cggcgaagaa
     1801 gagcccggcg gagagcccgc cgaggaacag gtagacgacg atgaggagac cccagttgaa
     1861 ttcgtgcatg tccgtctcct agagcaggta gtagagctgg gggccattgc ccgtctgggg
     1921 ttccttcacg cggtggcgcc gcgtggcgag caactcgtgg atccggctgg tgggatcctc
     1981 caggtcaccg aatacccgca ccttggaggg gcaagtctcc acgcaggccg gcacgtcgcc
     2041 cttgtccacc cggtggctgc agagtgtgca cttgtgcacc gttccgctct cctcatggaa
     2101 gtagcgggcg tcgtaggggc aggcgaccat gcaat
//
LOCUS       DATGWW010000347         1899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_109600, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000347 DATGWW010000000
VERSION     DATGWW010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109600"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..716)
                     /locus_tag="VK150_05050"
     CDS             complement(<1..716)
                     /locus_tag="VK150_05050"
                     /inference="COORDINATES: protein motif:HMM:NF024912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30707.1"
                     /translation="MSFRDECGVFGICRQEEASRQTYLGLYALQHRGQEAAGICSGDG
                     TGLHLHKALGYVADVFTESVLDSLPGDAAIGHTRYSTTGGNVASAAHPFLIHGRFGQV
                     ALCHNGNLTNTEELRARLIADGHTFTSPSDSEVLLALINRAQADTLEDAVVAALREAQ
                     GAYSLLILTDDALIAARDPHGFRPLALGRMGETTAFSSETCAFDLVGAHYERDVEPGE
                     MVVVPREGGPVQSRFPLPRV"
     gene            799..1545
                     /locus_tag="VK150_05055"
     CDS             799..1545
                     /locus_tag="VK150_05055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30708.1"
                     /translation="MRRSILMLALALPLAGPLAGNGLDDLRAALQKLPGGDPVRVTME
                     HSFWRQTTDDKKPTVTQGKVSALVDDGPQGLKVTWARPLLQQASRELAAQEKEPERTA
                     PTRTALRNVDPLEAAEFLNHAEALLRDLAQAQVVEERAETWQGRPAKLLVLKLTPRIP
                     ESQRKYLKELKVDAKVWVGADGLPLAFSSQVAFKGSRMFISFEGGNAQDLQFARVGNR
                     LLVTRTTSEDRSSGFGASSQTKKTTTLTVL"
     gene            complement(1548..>1899)
                     /locus_tag="VK150_05060"
     CDS             complement(1548..>1899)
                     /locus_tag="VK150_05060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30709.1"
                     /translation="GRAERLLYLAGPSPQTRPEPILLRFGNRSLPVWSLEMPKGIHAS
                     TVLVEVGPKLLALCDFSARFEQGDVLRLELHLEGLDDTTSLAPAEAGTTLLTTLQAWA
                     REGAQDGEGSVTVR"
BASE COUNT          291 a          662 c          674 g          272 t
ORIGIN      
        1 tgcacccgcg gcagggggaa gcgcgactgc acggggccgc cttcgcgggg caccaccacc
       61 atctcgccgg gctccacatc gcgctcgtag tgggctccca ccaggtcgaa ggcgcaggtc
      121 tcggagctga acgccgtggt ctcgcccatg cgccccaggg ccaggggccg gaagccgtgg
      181 ggatcccggg ccgcgatgag ggcgtcgtcc gtgaggatca gcagggagta ggccccctgg
      241 gcctcgcgca gggcggcgac cactgcgtct tccagggtgt cggcctgggc gcggttgatg
      301 agggctagca gcacttcgct gtcgctgggg ctcgtgaagg tgtggccgtc ggcgatgagc
      361 cgggcgcgca gctcctcggt gttggtgagg ttcccgttgt ggcacagcgc cacctggccg
      421 aagcggccgt ggatgaggaa ggggtgggcc gcggaggcca cgttgccgcc ggtggtggag
      481 tagcgtgtgt ggccgatggc cgcgtcgccg ggcagggaat ccagcacgga ttccgtgaac
      541 acgtccgcca cgtagcccag ggccttgtgg aggtgcaggc ccgttccgtc gcccgagcag
      601 atgccggcgg cctcctggcc gcggtgctgg agggcgtaga gtcccaggta ggtctggcgc
      661 gaggcctctt cctgacggca gatgccgaac accccgcatt cgtccctgaa cgacatggtt
      721 cccccgagtc ctccagaata acccccggga accccaaccc gtagcttcgg catctgtgca
      781 gtgccacccg gagtccccat gcgccgttcc atcctcatgc tggccctcgc cttgccactg
      841 gccgggcccc tcgccggcaa tggcctcgac gacctgcggg ccgccttgca gaaactgccg
      901 gggggcgatc ccgtccgggt cacgatggag cacagcttct ggcgccagac cacggatgac
      961 aagaagccca cggtgactca aggcaaggtg tccgccctgg tggatgacgg gccccagggt
     1021 ctgaaggtca cctgggcccg gcccctcctc cagcaggcga gccgcgaact ggccgcccag
     1081 gagaaggaac ccgagcgcac cgcccccacc cgcacggcgc tgcggaacgt ggaccccctc
     1141 gaggccgccg agttcctgaa ccacgccgag gccctcctgc gcgacctcgc ccaggcccag
     1201 gtggtggagg agcgggccga gacctggcag ggccgccccg cgaagctcct ggtgctgaag
     1261 ctcacgcccc ggatccccga gagccagcgg aaatacctca aggagctgaa ggtggacgcc
     1321 aaggtctggg tcggcgccga tggcctgccc ctggccttct ccagccaggt ggccttcaag
     1381 ggcagccgca tgttcatcag cttcgaaggc ggcaacgccc aggacctgca gttcgcccga
     1441 gtgggcaacc gcctcctggt gacgcggacc accagcgagg accgcagctc cgggttcggg
     1501 gcctcctcgc agacgaagaa gacgacgacg ctgacggtgc tgtagcccta gcgcaccgtc
     1561 acgcttcctt cgccgtcctg cgcgccctcc cgcgcccagg cctggagcgt ggtgagcagc
     1621 gtggtgccgg cttccgcggg agccaggctg gtggtgtcgt cgaggccctc caggtgcaat
     1681 tccagccgga ggacgtcccc ctgctcgaag cgcgcgctga agtcgcagag ggcgagcagc
     1741 ttcgggccga cttccaccag cacggtggag gcgtgaatgc ccttcggcat ttcgaggctc
     1801 cagaccggca ggcttcgatt gccgaagcgc agcagaatcg gctcgggccg ggtctgcgga
     1861 gagggcccgg ccaggtacag caggcgctcg gcgcgcccc
//
LOCUS       DATGWW010000348         1772 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_434366, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000348 DATGWW010000000
VERSION     DATGWW010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_434366"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..256)
                     /locus_tag="VK150_05065"
     CDS             complement(<1..256)
                     /locus_tag="VK150_05065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30710.1"
                     /translation="MAQVVRGMIGAGLWLGVAALPVAAQGMALPAADPVGIARGGAQV
                     AYGYSLEAASTNPALLASLKEKAGFHVAFGIEASSIQQSLE"
     gene            complement(368..577)
                     /locus_tag="VK150_05070"
     CDS             complement(368..577)
                     /locus_tag="VK150_05070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30711.1"
                     /translation="MLLSTLAFYGRLRLPAYFWQWPDLCRVVMGPWGRALALGFGLVM
                     CLAALLEVWELVDRLLVRFMGESEH"
     gene            complement(686..>1772)
                     /locus_tag="VK150_05075"
     CDS             complement(686..>1772)
                     /locus_tag="VK150_05075"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HLP30712.1"
                     /translation="KALGDGVDLCRQDPVIQAVLEAAEGLAAVLNPQREILAMNPALL
                     DLLAPEGVGACRGLRLGEALGCVRAGEGPDGCGSSVPCQQCGALASVLATQASGENAG
                     GECLLRLRREGHHEAREFAVRTLPLQVAGHPLTLLLLRDISAEKRLDRLDRTFIQDLS
                     HTLEGLAAGSEIMQQAGADPAAVAGEILRLAGSLKAEVDFHRDLQRAERGELLPRMRP
                     VAPTVVLDELVSRLGKAAAGRLVCLPLPEGAGLLATDPALLVRVLLDMVLNAQEALPP
                     GGQARIWYEAREGRPTFVVQNPGCMPDGVADRVFQRSFSTRAARGRGLGTYSMKVFGE
                     TVLGGKVGFSTDWGEGTRFFIELPAGL"
BASE COUNT          320 a          656 c          585 g          211 t
ORIGIN      
        1 attccagact ctgctggatg gacgaggcct cgatgccgaa agcgacgtga aagcccgcct
       61 tctccttcag cgaggcgagc agcgccggat tggtggaagc cgcttcgagg ctgtatccgt
      121 aggccacctg cgcgccgccc cgggcgatgc cgacgggatc cgcggccgga agggccatgc
      181 cctgggccgc gaccggaagg gcggccacgc ccagccaaag tcccgccccg atcattccac
      241 gaaccacttg ggccataccc cacgcctccc gagacacgct tcttgaatgg cccgaacccg
      301 gaaagggttc aaacccaagg ctccaggatc gccaaaaggg gccgattcac caagcgaagg
      361 attccgctca gtgctcggac tcccccatga accgcaccag gagccggtcc accagctccc
      421 acacttccag cagggcggcc aggcacatca ccaggccgaa gccgagcgcc agggcgcggc
      481 cccagggacc catgaccacc cggcagaggt ccggccattg ccagaaatag gcgggcagcc
      541 gcagccggcc atagaacgcc agtgtggaca gaagcattcc tccccacagg aggtagaaga
      601 acctcagcgc tcggaagagg acgtcccagg cgaagggacg ggggcggggg gcaggcatgg
      661 agggatcagc ataacccggg aaccgtcaaa ggcccgcggg aagctcgatg aagaaccggg
      721 tgccctcccc ccagtcggtg ctgaagccca ccttcccgcc cagcaccgtt tcgccgaaga
      781 ccttcatgct gtaggtgcca aggccccgcc cccgggcggc tcgggtgctg aaggaacgct
      841 ggaacacacg atccgccacc ccgtccggca tgcagccagg attctgcacc acgaaggtcg
      901 gacgcccctc ccgggcttcg taccagatgc gggcctgtcc gcccggcggc agcgcctcct
      961 gggcattgag caccatgtcc aggagcacgc ggacgaggag cgccgggtcc gtggccagga
     1021 gccccgcccc ctcgggcagg ggcaggcaga ccaggcggcc ggcggccgcc ttccccaggc
     1081 gcgagaccag ttcgtcgagc accaccgtgg gagcgaccgg gcgcatccga ggaagtagct
     1141 cgccgcgctc cgcccgctga aggtcccggt ggaaatccac ctccgccttc agggacccgg
     1201 ccagacggag gatctccccg gccaccgccg ctggatcggc acccgcctgc tgcatgattt
     1261 ccgagccggc cgccagccct tcgagggtgt gcgaaaggtc ctggatgaac gtgcggtcca
     1321 ggcggtccag ccgcttctcg gcgctgatgt ccctgaggag gagcagcgtc agcggatggc
     1381 ccgccacctg gagcgggagg gtccgaaccg cgaactcccg ggcctcgtgg tggccctccc
     1441 ggcgcaggcg cagcaggcac tcgccgccgg cattctcccc ggaggcctgg gtcgcgagca
     1501 ccgaggccag ggcgccgcac tgctggcagg gcaccgagga accgcaaccg tccgggccct
     1561 ctccagcccg cacacagccc agggcctcgc ccagacgcag tccccggcag gccccgacgc
     1621 cctctggcgc gagcaggtcg agcagcgcgg gattcatcgc gagaatctcg cgctgcgggt
     1681 tcagcaccgc cgcgaggcct tccgccgcct ccagcacggc ctggatcacc ggatcctggc
     1741 ggcagaggtc gacgccatcg cccagcgcct tg
//
LOCUS       DATGWW010000349         2025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_72392, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000349 DATGWW010000000
VERSION     DATGWW010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72392"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..332
                     /locus_tag="VK150_05080"
     CDS             <1..332
                     /locus_tag="VK150_05080"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HLP30713.1"
                     /translation="PETSPLLSAGQVGPHKIQGIGPNFVPAILNRKAFHRVRPVGYDD
                     AVATARRLAREEGLLTGISTGAIVFAALEVAKELGEGKTVVAVLCDTGERYLTHPLFA
                     EIDGPAI"
     gene            394..1020
                     /locus_tag="VK150_05085"
     CDS             394..1020
                     /locus_tag="VK150_05085"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HLP30714.1"
                     /translation="MKVVLLMLAGLLVQAQPPDLAAGKASAFDRAVVQEMSDARVQPR
                     AYAKHLRALRDDFEGTLWKRPGRVPLRTEEGVAALDEAIAFLESTRPLGPLRFNEGLA
                     RAARLHAQDLGPRGALEHVGADGSRLSDRLNRLGTWHGLVAENISTGETEARQVVIQL
                     LVDDGVAGRGHRKNIFHPDLHQAGAGTAPHRDFRTITVIDYADGFTPK"
     gene            1073..1858
                     /locus_tag="VK150_05090"
     CDS             1073..1858
                     /locus_tag="VK150_05090"
                     /inference="COORDINATES: protein motif:HMM:NF014460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLP30715.1"
                     /translation="MAFLARLGAPVRGFLEFLGDQAHLVLRTLRHALLLRTNQFGVVG
                     GQLRLQVRFTGLDALWLIAGTALLLGAVTLIQAFSQLSGLGAENYIGTLMVLIILREL
                     GPLLTAVLVIGRSATAIAAELGAMQLNGEVDALAAHGVNPYQYLLLPRWLGVLISVFV
                     LVVAFDTAALAGGFLVAKLKYGVTFGFFMESVRQALSNRDFAATLLKVLLFSGAITFH
                     ASHFGLGIRRSQTEIPQAVTKTVVSALVAVFALDGLIAALLYF"
BASE COUNT          269 a          710 c          714 g          332 t
ORIGIN      
        1 agcccgagac ctccccgctg ctcagcgcgg ggcaggtggg cccccacaag atccagggca
       61 tcggcccgaa cttcgtgccg gccatcctga accgcaaggc cttccaccgc gtgcggcccg
      121 tgggctacga cgacgccgtg gccaccgctc gccgcctggc ccgggaggag gggctgctca
      181 cgggcatcag caccggcgcc atcgtgttcg ccgcgctgga ggtggcgaag gagctgggcg
      241 aaggcaagac cgtggtggcc gtgctctgcg acaccggcga gcgctacctc acccacccgc
      301 tcttcgcgga gatcgacggg cctgcgatct gagccttcgc gaaggccgcc cggagcgaac
      361 ccgcctatgc tgggggttcg ttccgaggtg gccatgaagg tggttctgct gatgcttgcg
      421 ggcctgctgg tgcaggccca acctcctgac ctcgcggcgg ggaaggcctc ggccttcgat
      481 cgggcggtgg tgcaggagat gagcgacgcg cgcgtgcagc cgcgggccta cgcgaagcat
      541 ctccgggccc tgcgggacga cttcgagggc accctctgga agcggccggg ccgcgtgccc
      601 ctgcgcaccg aggagggcgt ggctgccctg gacgaggcca tcgcgttcct ggaatccacc
      661 cggcccctgg ggcccctgcg cttcaacgaa ggcctcgccc gggcggcccg cctgcatgcc
      721 caggatctgg gcccccgcgg cgcgctggag cacgtgggcg cggacggcag ccggctgtcc
      781 gaccggctca accggctggg cacctggcac gggctcgtgg ccgagaacat cagcacgggg
      841 gaaaccgaag cccggcaggt ggtgatccag ctgctggtgg atgatggcgt cgcgggccgg
      901 ggccaccgga agaacatctt ccatcccgac ctgcaccagg cgggggcggg aaccgcgccc
      961 caccgggatt tccggacgat cacggtgatc gactacgcgg acgggttcac gccgaagtga
     1021 tcggttttct gctagcctgg gccatcccct cgggtgtggc attgggtgtg acatggcttt
     1081 ccttgcgcgg ctcggcgcgc ctgtgcgcgg cttcctggag ttcctgggcg accaggccca
     1141 cctggtgctg cggacgctgc gccacgccct gctgctgcgc acgaaccagt tcggcgtggt
     1201 gggcgggcag ctccgcctgc aggtccgctt cacgggtctc gacgcgctct ggctcatcgc
     1261 cggcacggcc ctgctgctgg gggcggtgac actcatccag gccttcagcc agctctcggg
     1321 gctgggcgcc gagaactaca tcggcacgct gatggtgctg atcatcctgc gcgaactggg
     1381 cccgctgctg actgcggtgc tggtcatcgg ccgcagcgcc acggccatcg ccgctgagct
     1441 gggcgccatg cagctgaacg gcgaggtgga cgcgctggcc gcccacggcg tgaaccccta
     1501 ccagtatctg ctgctgcccc ggtggctggg ggtgctgatc tcggtgttcg tgttggtggt
     1561 ggcctttgac accgcggcgc tggcgggcgg cttcctggtg gccaagctca agtacggcgt
     1621 cacctttggc ttcttcatgg agtccgtgcg acaggccctg tccaatcggg atttcgccgc
     1681 gaccctgctg aaggtgctgc tcttctcagg cgccatcacg ttccacgcct cccacttcgg
     1741 cctcggcatc cggcgcagcc agacggaaat cccccaggcc gtcaccaaga cggtggtctc
     1801 agccctggtg gcagtctttg ccctggacgg cctcatcgcc gccctcctct acttctgatg
     1861 gggccgcatc ccatgctcga gctcagcggc ctcgccctcg acgcgcccga tggccggcgg
     1921 cttctggagg gtctcgacct ggcggtgcca agtggcggca accacctggt gaccgggccc
     1981 agcggctgcg ggaagagcca cctcctgcgg gtgatcgcgg gcacc
//
LOCUS       DATGWW010000350         1591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_434537, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000350 DATGWW010000000
VERSION     DATGWW010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_434537"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..529)
                     /locus_tag="VK150_05095"
     CDS             complement(89..529)
                     /locus_tag="VK150_05095"
                     /inference="COORDINATES: protein motif:HMM:NF013629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HLP30716.1"
                     /translation="MADSATPGTPSLRAAGMRQTPQREGILRVLKDSDRPLTVEEIWE
                     RIPERRSGLPTVYRNLERFVREGWAESILGGDQVMRFVRCDSRHHHHHLQCERCGRTA
                     EVDACGLDESLRNLETLSGFKITRHQLLLFGLCSACRAAEVHVR"
     gene            566..>1591
                     /locus_tag="VK150_05100"
     CDS             566..>1591
                     /locus_tag="VK150_05100"
                     /inference="COORDINATES: protein motif:HMM:NF024586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HLP30717.1"
                     /translation="MLQRTWDRMGSPEAGAPFLPLSFRLFASFGLLVVHAALPEDGRA
                     SGPGEWAYLAILMLMLVEALWESGRGLLSRDQLFPTPRLTWIRWNLALDLALVTLVIA
                     FQGVVQDRFATLYIFPVLASAFYLDTVEIVWVGVLSSVTHILLVLGFTAGWLPPFGLS
                     GEIPDLDMSRLPYLLGIASLQVFVATLLVVIIRRRIERLSTDLQESEATVGELAALHR
                     RVVESLTSGLVTLDLDGLVTSANPAAEAILGQVIPAGIPLGDLIPIPPVPARRQSPVQ
                     RFEVTLPGPAPRIIGGHLASLRGADGSESGQLVLFQDLTELKALEERTRISERLAAIG
                     QLAAGLAH"
BASE COUNT          227 a          567 c          516 g          281 t
ORIGIN      
        1 ctctaccact gagttacaca cgcgtgagac atcaagacta gcaatggcgc gcagtccggt
       61 caacggtgaa tttcaaaggt gaccgcactc aacggacgtg cacctccgcg gcacggcagg
      121 cgctgcaaag accgaagagc agcagctgat gccgcgtgat cttgaagccc gagagagtct
      181 ccaggttgcg caatgactcg tccaatccgc aggcgtccac ctcggcggtg cgcccgcagc
      241 gttcgcattg caggtggtga tggtgatggc gtgaatcgca ccggacgaag cgcatcacct
      301 ggtcgccgcc caggatgctc tcggcccagc cctcgcgcac gaaccgctcg aggttgcggt
      361 agaccgtggg caggcccgag cgccgctcgg ggatccgctc ccagatctcc tcgaccgtca
      421 gggggcggtc ggaatccttc aacacccgga ggatgccctc ccgctgcggc gtctgccgca
      481 tgccggcggc gcgaagggag ggggtgcctg gggtggcgga gtcggccatg gccctagcat
      541 gccagattcg ggcaccatgg ttgccatgct ccaacgcacc tgggatcgga tgggctcgcc
      601 cgaagctggc gcccccttcc ttccgctctc cttccgcctc ttcgccagct tcggcctgct
      661 ggtggttcat gccgcgctgc ccgaggacgg gcgggcctcg ggccccgggg agtgggccta
      721 cctggccatc ctgatgctga tgctcgtgga agccctgtgg gaatccgggc ggggcctgct
      781 ctcccgggac cagctcttcc ccaccccgcg cctcacatgg atccgatgga acctggccct
      841 ggacctggcg ctggtcaccc tggtcatcgc cttccagggg gtggtgcagg atcgcttcgc
      901 cacgctctac atcttcccgg tgctggcctc ggccttctac ctggacacgg tcgaaatcgt
      961 gtgggtgggc gtcctctcct cggtcacgca catcctgctg gtgctcggct tcaccgcagg
     1021 ctggctcccg cccttcgggc tatccgggga gattcccgat ctcgacatga gccgcctgcc
     1081 ttacctcctg ggcatcgcct ccctgcaggt cttcgtcgcc accttgttgg tcgtgatcat
     1141 ccggcggcgc atcgagcggc tcagcacgga cctgcaggag agcgaagcca cggtcggcga
     1201 gctggccgcc ctgcaccgcc gcgtggtgga atccctgacc tcggggctcg tcacgctgga
     1261 tctggacggc cttgtcacct cggccaatcc cgctgcggag gccattctcg gccaggtgat
     1321 cccagccgga atccccctcg gggacctgat tcccatccct cccgtgcctg cccgccgtca
     1381 gagtccggtc cagcggttcg aggtgaccct gccggggccg gcgccgcgca tcatcggcgg
     1441 ccacctggcg tcgctccggg gcgcggacgg cagtgaatcg ggacagctgg tcctcttcca
     1501 ggacctcacc gagctcaagg cgctggagga gcgcactcgc atcagcgagc ggcttgccgc
     1561 catcggccag ctggcggccg gcctggccca t
//
LOCUS       DATGWW010000351         1588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_339997, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000351 DATGWW010000000
VERSION     DATGWW010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_339997"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1114
                     /locus_tag="VK150_05105"
     CDS             <1..1114
                     /locus_tag="VK150_05105"
                     /inference="COORDINATES: protein motif:HMM:NF024041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30718.1"
                     /translation="ENKTGPGHKGFAVSADPFLTFPQASSRRDFTINSMGLSLPDLEL
                     ADPHGGRRDLEARVLRHVSPAFSEDPLRVLRAVQFAARFELDIAPETQDLCRTLSLSE
                     LPMERIWGELRKLLLKARRPSLGLEWMRKLGLLDYFPELKALIGVQQDPEWHPEGDVW
                     IHNNMVVDEAAKLRRDDLGESENLALMLGALCHDFGKPLTTVFSDGRWRSPGHDVRGE
                     EPTRSFLARLTREADLVETVVGFVREHLKPALLHRARHEVKASAIRRLALKVDIEKVV
                     RVARADHFGRTTPDALAREFPAGDWLLDQSRQLDVLDSKPKPWLTGKQLLTLGMKPGP
                     EMGRLIAESFELQLEGELADAEAALAWAKARMGCGT"
     gene            complement(1191..>1588)
                     /locus_tag="VK150_05110"
     CDS             complement(1191..>1588)
                     /locus_tag="VK150_05110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30719.1"
                     /translation="AVVCAEINEKVPPPVRFTVRWDPAHAWAFDHFYGQSLSSLEDLG
                     RRHGYVLAGLEYNNAFLVPADSGIPALSAEAAYRRGYLDRPDRLERLPWNRDMEPLHG
                     MAPEAMVEFLKEKFKGYEGKYVLSPERLT"
BASE COUNT          271 a          550 c          527 g          240 t
ORIGIN      
        1 cgagaacaag accggtccgg ggcacaaggg cttcgccgtc tccgccgacc ccttcctcac
       61 cttcccccag gcctcctccc ggcgcgactt caccatcaac agcatgggcc tcagcttgcc
      121 ggacctcgag ctggccgacc cccatggagg ccgccgggac ctggaggcga gggttctccg
      181 ccatgtctcc cccgcctttt ccgaggaccc cttgcgagta ctgcgggccg tgcaattcgc
      241 ggcgcgcttc gagctcgaca tcgcgcccga gacccaggac ctctgtcgca ccctgtccct
      301 ctccgagctg cccatggagc gcatctgggg cgagctgcgc aaactgctcc tcaaggcccg
      361 ccgcccctcc ctgggactcg agtggatgcg gaagctgggc ctcctcgatt atttccccga
      421 actcaaggcc cttatcgggg tgcaacagga tccggaatgg catcccgagg gggatgtctg
      481 gatccacaac aatatggtcg tggacgaagc cgccaagctg cgtcgcgacg acctggggga
      541 atcggagaat ctcgccctca tgctgggggc gctctgccac gacttcggca agcccctcac
      601 cacggtcttc agcgatgggc ggtggcgcag ccccggccac gacgtccgcg gcgaggaacc
      661 cacccgttcc ttcctggccc gcctcacccg cgaggccgac ctggtggaga ccgtggtcgg
      721 cttcgtgcgg gagcacctga agcctgccct gctccaccgg gcccgccatg aggtgaaggc
      781 cagcgccatc aggcgcctgg ctctcaaggt ggacatcgag aaggtggtac gggtggcccg
      841 cgccgaccac ttcggccgca ccacccccga tgccctggcg cgggagttcc ccgccgggga
      901 ctggctcctg gaccagagcc ggcagctcga cgtgctcgac agcaagccca agccctggct
      961 caccggcaaa cagctgctga cgctcgggat gaagcccggc ccggagatgg gacggctcat
     1021 cgcggagagc ttcgagctgc agctggaggg tgagctggcc gacgcggagg ccgcgctggc
     1081 gtgggccaag gcgaggatgg ggtgcggaac gtaagggggg acccatcctg gtgcccttcc
     1141 gggccccgcg aaaagcggaa aacaaaaaac gaaaaacccc gtgcgcgtga ctacgtaagc
     1201 cgctccggcg acagcacgta cttcccctcg taccccttga acttctcctt taggaactcc
     1261 accatcgcct ccggcgccat gccgtgcagg ggctccatgt cccggttcca gggcaggcgc
     1321 tccagacggt ctgggcggtc gaggtagccg cgacggtagg cggcctcggc ggagagcgcg
     1381 ggaatgccgg agtccgccgg gaccaggaag gcgttgttgt attcgaggcc cgcgaggaca
     1441 tagccatggc ggcggccaag gtcttcgagg ctggagaggc tctggccgta gaagtggtcg
     1501 aaggcccagg catgggcggg gtcccaccga accgtgaagc gtaccggggg aggcaccttc
     1561 tcgttgattt cggcacagac aaccgcgg
//
LOCUS       DATGWW010000352         3495 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_299876, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000352 DATGWW010000000
VERSION     DATGWW010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3495
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299876"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(32..1864)
                     /gene="dnaG"
                     /locus_tag="VK150_05115"
     CDS             complement(32..1864)
                     /gene="dnaG"
                     /locus_tag="VK150_05115"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HLP30720.1"
                     /translation="MAGKIPQEFIDELVARTDIVELIDSRVPLKKAGREFTACCPFHN
                     EKSPSFTVSPTKQFYHCFGCGAHGTAIGFLMEYEHMEFPEAVEDLARRAGLTVPRIGG
                     DSRDDAPRQSTTQPLFDLLSEAAGYFRYQLKNHAEAPKAIDYMKGRGLSGEIAKDFGI
                     GYAPSGWQNLIEALANHPARHRLAEAGLVIEAEGKRYDRFRHRIMFPIRDTRGRIIGF
                     GGRVLSKEDTPKYLNSPETPVFHKGKELYGLYEARQALRDLPRLLVVEGYMDVVALAQ
                     FGIRYAVATLGTAVTREHLERLFRTTSEVVFCFDGDRAGRGAAWRGLENAMPLMREGY
                     QVKFMFLPEGEDPDTLVRKIGREAFEAEIGKALPLSVFLIEELSHQVDMRSLDGRAQL
                     VEKVRPLVAPVPEGIYRRLLIEAVAQFARVEPTQLMALLEGKTPAPAAAEGRAPSYVP
                     RREAPPTARGPAPGRSAPSPVRHALSLLLQEPALAQAAGDPSRFSGLRQPGISLLVEV
                     IDLLQKRPNLTWGGLLEHWRGTEEGRHLMRLAAKEMLLEAPETLEHEFLGALDILERQ
                     FLSQRREELEERFNRRTITEVEKVELQQLMTNLPGAPGRNSKGN"
     gene            complement(1911..2366)
                     /locus_tag="VK150_05120"
     CDS             complement(1911..2366)
                     /locus_tag="VK150_05120"
                     /inference="COORDINATES: protein motif:HMM:NF020977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HLP30721.1"
                     /translation="MSQESLKKRVEEAMKAAMRAQDKPRLGTIRLILAAVKQREVDER
                     ITLDDTQVLAVLDKMLKQRRDSIDQFRKAGREDLAVNEEAEVKVIQEFMPAALSDAEL
                     DALVAAAVAQSGAASMKDMGKVMAILKPQVQGRADMGAVGAKIKAKLPG"
     gene            complement(2429..2644)
                     /gene="rpsU"
                     /locus_tag="VK150_05125"
     CDS             complement(2429..2644)
                     /gene="rpsU"
                     /locus_tag="VK150_05125"
                     /inference="COORDINATES: protein motif:HMM:TIGR00030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HLP30722.1"
                     /translation="MPIVRVRENEPFDVALRRFKRSCEKAGILSEVRARQFYEKPTTE
                     RKRKKAAAVKRQQKKLMRDVQRRRRLY"
     gene            2806..>3495
                     /gene="tsaD"
                     /locus_tag="VK150_05130"
     CDS             2806..>3495
                     /gene="tsaD"
                     /locus_tag="VK150_05130"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HLP30723.1"
                     /translation="MLVLGIETSCDETGIALYESERGLLAHALYSQVELHATYGGVVP
                     ELASRDHVRKVLPLTEAVLAEAQLPRTAIQGVAYTAGPGLVGALLVGAAVGRALAWSW
                     EVPAIGVNHMEGHLLAPLLEPDPPGFPFVALLVSGGHTQLVRVEGVGRYELLGESVDD
                     AAGEAFDKTAKLLGLGYPGGPQLSKLAEEGTPGRFKFPRPMTDRPGLDFSFSGLKTFA
                     ITTLRQSDGSDQ"
BASE COUNT          520 a         1141 c         1211 g          623 t
ORIGIN      
        1 tgttatttgc gccaagtcgg tcaatttcct atcaatttcc cttcgaattc cgcccgggtg
       61 ccccgggcag attcgtcatg agctgctgca attcaacctt ctcgacctcg gtgatggtgc
      121 gacggttgaa tcgttcctcg agctcttcgc gccgctggga gaggaactgg cgctccagga
      181 tgtcgagggc ccccaggaat tcgtgctcca gggtctcggg ggcttcgagc agcatctcct
      241 ttgccgccag gcgcatgagg tggcgccctt cttccgtccc tcgccagtgt tcgagcagtc
      301 cgccccaggt aaggttcggc ctcttctgca ataaatcgat gacctccacc aggaggctga
      361 tgccgggctg gcgcaggccg ctgaagcggg aggggtcgcc cgcggcctgg gcgagggcag
      421 gctcctgcag caggaggctg agggcatggc ggaccggcga gggggcggag cgccccgggg
      481 cagggccccg cgcagtgggc ggtgcctccc ggcggggcac gtaggagggg gcacggccct
      541 cagcggccgc cggtgcgggg gtcttccctt cgagcaacgc catgagctgg gtcggctcca
      601 cccgggcgaa ttgggccacc gcctcgatca gcaggcggcg gtagataccc tcgggcaccg
      661 gcgcgaccag gggccgcacc ttctccacca actgggcgcg cccgtcgagg ctgcgcatgt
      721 ctacctggtg gctcaactcc tcgatcagga agacggagag gggcagcgcc ttgccgatct
      781 ccgcctcgaa ggcctcgcgg ccgatcttgc gcaccagggt gtccgggtcc tcgccctcgg
      841 gcaggaacat gaacttcacc tggtagccct cgcgcatgag gggcatggcg ttctccagac
      901 cgcgccaggc ggcgccgcgg ccggcgcggt cgccgtcgaa gcagaagacc acctccgagg
      961 tggtgcggaa gaggcgctcc aggtgttcgc gcgtcacggc ggtgccgagg gtggcgaccg
     1021 catagcggat gccgaactgc gccagggcca cgacgtccat gtagccctcc accaccagca
     1081 ggcgcggcag gtcgcgcagg gcctggcgtg cctcgtagag gccgtagagc tccttgcctt
     1141 tgtggaagac cggcgtctcg ggggagttca ggtatttggg ggtgtcttcc ttggagagga
     1201 cgcgtccgcc gaagccgatg atgcggccgc gggtgtcccg gatggggaac atgatgcggt
     1261 ggcggaagcg gtcgtagcgc tttccctccg cttcgatgac cagacccgcc tcagcgaggc
     1321 ggtggcgggc cgggtggttg gccagcgcct cgatgaggtt ctgccagccc gagggcgcgt
     1381 agccgatgcc gaaatccttg gcgatctcgc cggagaggcc gcgtcccttc atgtaatcga
     1441 tggccttcgg cgcttcggcg tggttcttca actggtagcg gaagtagccg gcggcctcgg
     1501 agaggaggtc aaaaaggggt tgggtggtcg attggcgggg cgcgtcgtcc cggctgtcac
     1561 cgccgatccg gggcacggtg agcccggcgc ggcgcgccag atcctccacc gcctccggga
     1621 actccatgtg ctcgtactcc atcaggaagc cgatggcggt gccatgggcc ccgcagccga
     1681 agcagtggta gaactgcttg gtcgggctga cggtgaacga ggggctcttt tcgttgtgga
     1741 agggacagca ggcggtgaac tcgcggcccg ccttcttcag cgggacgcgg ctgtcgatga
     1801 gctcgacgat gtcggtgcgc gccaccaact catcgatgaa ctcctggggg atttttcctg
     1861 ccatgcagcc cgattctggg ccccggcggg gccgcaatca gtgaccggga tcagcccggc
     1921 agcttggctt tgattttggc gcccaccgcg cccatgtcgg cgcggccctg gacctggggc
     1981 ttgaggatgg ccatcacctt gcccatgtct ttcatggagg cggcgccgct ctgggcgacg
     2041 gcggcggcga ccagggcgtc cagctccgcg tcggacagcg cggccggcat gaactcctgg
     2101 atcaccttga cctcggcctc ttcattgacg gcgaggtctt cgcgtccggc cttgcggaac
     2161 tggtcgatgg agtcgcggcg ctgcttcaac atcttgtcga gcaccgcgag tacctgggta
     2221 tcgtccaggg tgatgcgctc atccacctcg cgctgcttca cggcggcgag gatcaggcgg
     2281 atggtgccga gccggggctt gtcctgggcg cgcatggccg ctttcatggc ctcttcaacg
     2341 cgcttcttca gggactcctg gctcatgagc tgctccgtta cgcttcccga actgttccac
     2401 cgcgcgatgc ggtggtccta ccgaaaactc agtagagacg acgacggcgc tgcacgtcgc
     2461 gcatcagctt cttctgctgg cgcttcacgg cggcggcctt cttgcgcttg cgctcggtgg
     2521 tcggcttctc gtagaactgg cgggcgcgca cctcggagag gatgccggcc ttttcacagc
     2581 tgcgcttgaa gcgacgcagg gcgacgtcga agggctcgtt ttctctgacg cgaacgatag
     2641 gcattacttg gttgacctca gtgtgtccga acttgtcccg ggcaggggac ggggaaagac
     2701 cgcgaattct aaagcagagg tccgcaaaaa tgcaaaacct cttgtggtca gtctagcgtc
     2761 ccccgaaaat ggcagacccg cccggacccg accttcccaa gacccgtgct agtcctcggc
     2821 atcgaaacct cctgcgacga aaccggcatt gcgctctacg agagtgagcg cggactcctt
     2881 gcgcacgcct tgtatagtca ggtggagctt cacgccacct acgggggcgt ggtgcccgag
     2941 ctggcctccc gggaccatgt gcgcaaggtc ctgcccctga ccgaggcggt cctggccgag
     3001 gcgcagctcc cccgcaccgc catccagggg gtcgcctaca cggcgggccc cggtctggta
     3061 ggggccctgc tggtgggggc cgccgtgggc cgcgccctcg cctggagctg ggaggtgccg
     3121 gccatcgggg tcaaccacat ggaggggcac ctgctcgccc cgctcctgga gcccgatccc
     3181 ccggggtttc cgttcgttgc cctgctcgtc tccggcggcc acacgcagct ggtgcgcgtg
     3241 gagggggtgg ggcgttacga actgctcggc gagtcggtgg acgatgcggc cggcgaggcc
     3301 ttcgacaaga cggccaagct cctgggcctc ggctatcccg gcggacccca gctctcgaaa
     3361 ctggccgaag agggcacgcc cgggcggttc aagttcccgc gccccatgac tgaccgcccc
     3421 ggtctcgact tcagcttcag cggcctcaag accttcgcca tcaccaccct gcgccagagc
     3481 gacggttcgg accag
//
LOCUS       DATGWW010000353         2178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_435001, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000353 DATGWW010000000
VERSION     DATGWW010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435001"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1260)
                     /gene="glgC"
                     /locus_tag="VK150_05135"
     CDS             complement(<1..1260)
                     /gene="glgC"
                     /locus_tag="VK150_05135"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: protein motif:HMM:NF001947.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008878 - glucose-1-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HLP30724.1"
                     /translation="MLTISESRLSPRHTIALVMAGGRGKRLMDLTDHYSKPGLDFGGK
                     YRIIDFTLSNCVNSGFRRIMVLTQYNSHRLLEHLQFGWTFLAGKLNEYVHVLPAQQSF
                     DKNAWYSGTADAVYQNLSNIQAANPKNVLILAGDHIYRMDYKVFLQDHLDNQSDMTIA
                     CLEVPRDAARGFGIAHVDAEDRIVSFVEKPEDPPAIPGKPDKAFASMGIYLFNAEFLY
                     RALIRDAEDPNSGHDFGKDIIPRLVTESRVFAHRFERSCIPNPGHPEPYWRDVGSVDS
                     YWEANMDLTSVLPALNLYDEAWPITTHQEQLPPAKFVHAGEMRNGVALSSLVSGACVI
                     SGAHVHHSLLSSRVSVHSHARLDGAVILPDCDIGRHARLRRCIVARNCRIPEGFIVGE
                     DPEEDARRFFRTPGGVTLISQRTLSQLE"
     gene            complement(1355..2047)
                     /gene="aat"
                     /locus_tag="VK150_05140"
     CDS             complement(1355..2047)
                     /gene="aat"
                     /locus_tag="VK150_05140"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HLP30725.1"
                     /translation="MPVFRLTDHLVFPDPELAEDGLLAIGGDLSVPRLLLAYRSGIFP
                     WYGEEDPLLWWSPPERAVLRPGHLHLSARTRRSLRQRPFEIRFDSAFEQVIGCCSQVP
                     RPGQDGTWITADMQGAYVALHRAGHAHSVEAWREGELRGGLYGVSLGGAFFGESMFSL
                     EPEASRAALEALDARLLAWGFTLLDGQLPHEGLAGYGFQPVPRALFLADLADALRREG
                     HLGPWPDRLPER"
BASE COUNT          352 a          710 c          792 g          324 t
ORIGIN      
        1 ctccagctgg ctcagcgtgc gctgggagat gagcgtcacc ccgccgggcg tgcggaagaa
       61 ccgccgggcg tcttcctcgg gatcctcgcc cacgatgaag ccttcgggga tgcggcagtt
      121 ccgcgccacg atgcagcgcc gcaggcgggc gtggcgtccg atgtcgcagt ccggcaggat
      181 caccgcccca tccagccggg cgtgggaatg cacggagacc cggctggaga gcagcgaatg
      241 gtgcacatgg gccccggaga tcacgcaggc gcccgacacc aggctggaca gcgccacgcc
      301 gttccgcatc tcacccgcat ggacgaactt cgccggcggc agctgctcct ggtgggtggt
      361 gatgggccag gcctcatcgt agaggttgag ggccggcagc acgctggtga ggtccatgtt
      421 ggcctcccag taggaatcca cgctgcccac atcccgccag tacggctccg ggtggccggg
      481 gttcgggatg cagctgcgtt cgaagcgatg ggcgaaaacc cgcgattcgg tcaccagccg
      541 tggaatgatg tccttgccga aatcatgccc tgagttcgga tcctccgcgt cgcggatgag
      601 ggcccggtac aggaactcgg cattgaagag gtagatgccc atggaggcga aggccttgtc
      661 cggcttgccg ggaatggccg ggggatcttc cggcttctcg acgaaggaca cgatgcggtc
      721 ctcggcatcc acgtgggcga tgccgaaacc ccgggccgcg tcccggggca cctccaggca
      781 cgcgatggtc atgtcagatt ggttgtcgag gtggtcctgg aggaacacct tgtagtccat
      841 gcggtagatg tggtcgcccg ccaggatcag cacgttcttg ggattggcgg cctggatgtt
      901 gctgaggttc tggtagaccg cgtccgcagt gccgctgtac caggcgttct tgtcgaagct
      961 ctgctgggcg ggcagcacgt gcacgtactc attgagcttg cccgccagga aggtccagcc
     1021 gaactgcagg tgctccagca gccggtgcga gttgtactgg gtgagcacca tgattcggcg
     1081 gaaccccgag ttcacgcagt tcgacagggt gaagtcgatg atccggtact tgccgccgaa
     1141 atccaggccg ggcttcgagt agtggtccgt gaggtccatc agccgcttcc cacggccgcc
     1201 cgccatgacc agggcgatgg tgtggcgcgg ggacagtcgc gattccgaga tcgtcagcat
     1261 ggggtccctc gggggtctag gggcatgata gccctgggcg cgggatccgg aagcggcaac
     1321 cgcgcggggg ttccgtcgcc aaccagctcg gcgctcagcg ctccgggagg cggtcgggcc
     1381 aggggcccag gtgcccctcc cgccgcaacg catcggccag gtccgccagg aagagcgccc
     1441 tcggcacagg ctggaagcca tagcccgcca ggccttcatg gggcagctgg ccgtccagca
     1501 gggtgaagcc ccaggcgagg agccgcgcgt caagcgcctc cagggccgcc cggctggctt
     1561 cgggctcgag gctgaacatg ctctcgccga agaaggcgcc gcccagagac acgccgtaga
     1621 ggccgccccg cagctcgccc tcccgccagg cttccacact gtgggcgtgg ccggcccggt
     1681 gcagcgccac ataggccccc tgcatgtccg cggtgatcca ggtgccgtcc tggccggggc
     1741 gaggcacctg ggaacagcag ccgatgacct gttcgaacgc cgagtcgaag cggatctcga
     1801 agggccgctg gcgcagggac cgccgggtcc gggccgacag gtgaaggtgg ccgggccgca
     1861 gcacggcgcg ctccggcggc gaccaccaga gcaggggatc ctcctcgccg taccagggga
     1921 agatgccgct gcggtaggcg aggagcagcc gcggcacgct gaggtcgccg ccgatggcca
     1981 gcaggccgtc ctccgccagt tcggggtcgg ggaagaccag gtgatccgtc agccgaaaga
     2041 caggcacagt cggccgtcct tgaggtccac ggtggccttg ccgcccttcg ccaggggccc
     2101 gaagagcagc gcctcggcca gcgggcgccg cagctcgcgc tcgatgagcc gggccatggg
     2161 gcgggcgccg aaggcggg
//
LOCUS       DATGWW010000354         3508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_252595, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000354 DATGWW010000000
VERSION     DATGWW010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3508
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252595"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1298
                     /locus_tag="VK150_05145"
     CDS             <1..1298
                     /locus_tag="VK150_05145"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HLP30726.1"
                     /translation="VAAAVKQALGRKADAGLELVLFPGFATHDGRHANNSWLQETPDP
                     ISKMTWDNPVAVSVQDAQALGIQEGDLVTLTLEGTTLRLPAVLQPGQAKGVLALALGY
                     GRATGGVAKGVGVNAFPLMGLDAATANVRGGARLAKAGGRKELSRTQSHHRMEGRDIV
                     RSLTMEEFAHNPKGHHHMPELVSLYEDQTFPDHKWGMVIDLAACTGCSACVVACQSEN
                     NVPVVGPEQVARGREMHWIRIDRYYEGELENPKVVHQPMLCQHCDSAPCENVCPVNAT
                     NHSPDGLNQMAYNRCVGTRYCANNCPYKVRRFNFLEYTAYKTEPETLVNNPEVTVRPR
                     GVMEKCSFCVQRINDVKIRAKGEGRSILDGEITTACMAGCPSDAIVFGDLKNPKSKVA
                     QLVAASRAYRVLEEVGAKPAITYLADLKNPALEGGSHAH"
     gene            1288..2691
                     /gene="nrfD"
                     /locus_tag="VK150_05150"
     CDS             1288..2691
                     /gene="nrfD"
                     /locus_tag="VK150_05150"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HLP30727.1"
                     /translation="MRTDAVHAGAIPEALIEPSLTVGKVTPGSLDDQVLAFPETKPPR
                     QWYLGLAITLTALFIGLGFIGYTFVTGIGAWGNNSPVFWAFDIINFVFWVGIGHAGTL
                     ISAILFLFRKRWRNAIARFAEAMTIFAVMCAVIFPLIHVGRPWLAFWLFPYPNQRALW
                     TNFRSPLLWDVFAVNTYFSVSLMFWYLGLIPDIASMRDRTTSKLRKAIYTALAMGWRG
                     AASHWQHYEKAYLLLAGLATGLVLSVHSVVSFDFATSVVPGWHMTIFPPYFVAGAIFA
                     GFAMVVIVLVVVRETMQLKNLITMRHLDVMNKVILAMSCIMGYSYMMEGFTAWYSMNE
                     FLHHGFMNIISGTYGWAGWLTIFCNILFPQILWFRKARASYFWMIMVALGVTVGMWFE
                     RFVIIVISLHQDYLPSAWRIYKPTMTDFGILLGTFGLFFTLVLIFARVLPVIATTEVK
                     AILPDAQPSHHGDDHHA"
     gene            2684..>3508
                     /locus_tag="VK150_05155"
     CDS             2684..>3508
                     /locus_tag="VK150_05155"
                     /inference="COORDINATES: protein motif:HMM:NF023249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3341 domain-containing protein"
                     /protein_id="HLP30728.1"
                     /translation="MPETSYAVLGIFDTPDALMKAIPKARASKLGAVEAYTPYPIHGI
                     DDALGLRRSPLGGMVLVMGILGALTAFGFQYWISAIDYPIITGGKGAGSWEAFIPIMF
                     EVTVLFATFTAGLGMLFLLNRLPFFGHPVLSSKSVKGITRDRYALALEAESEGFDSAA
                     AARVLQEAGATEVEILPAPDRSPFLTSAFILRVAAGIFGACVVAGIAMFLVTKWFPLL
                     APMKYMQDQPRLNAQKPSAFFKDGHGMQRPVAGTVARGHLPTATGTQEAAATLVNPL"
BASE COUNT          559 a         1319 c         1037 g          593 t
ORIGIN      
        1 cggtggccgc cgcggtgaag caggccctgg gccgcaaggc ggatgccggc ctcgagctgg
       61 tgctcttccc cgggttcgcc acccacgatg gccgccatgc caacaacagc tggctgcagg
      121 agaccccgga tcccatctcc aagatgacct gggacaaccc cgtggccgtc tccgtgcagg
      181 acgcccaggc ccttggcatc caggagggcg acctcgtcac cctgaccctg gagggcacca
      241 ccctgcgcct gcccgctgtg ctccagcccg gccaggccaa gggcgtcctc gccctggcgc
      301 tcggctacgg ccgcgccacc ggcggcgtgg ccaagggcgt gggcgtcaac gccttccccc
      361 tcatgggcct ggatgccgcc accgccaacg tgcgcggcgg cgcgcgcctc gccaaggccg
      421 gcggccggaa ggagctgtcc cgcacccaga gccaccaccg catggagggc cgcgacatcg
      481 tgcgctccct cacgatggag gagttcgccc acaaccccaa gggccatcac cacatgcccg
      541 agctggtctc cctctacgag gatcagacct tcccggacca caagtggggc atggtcatcg
      601 acctggcagc ctgcaccggc tgttcggcct gcgtggtggc ctgccagtcg gagaacaacg
      661 tgccggtggt gggccccgag caggtggccc gaggccgcga gatgcactgg atccgcatcg
      721 accggtacta cgaaggcgag ctggagaacc cgaaggtggt ccaccagccg atgctctgcc
      781 agcactgcga cagcgcgccc tgcgagaacg tctgcccggt gaacgccacc aaccacagcc
      841 cggacggcct caaccagatg gcctacaacc gctgcgtggg cacccgctac tgcgccaaca
      901 actgccccta caaggttcgc cgcttcaact tcctcgagta caccgcctac aagaccgagc
      961 ccgagaccct ggtgaacaac cccgaggtca cggtccgtcc ccgcggcgtc atggagaagt
     1021 gctccttctg cgtgcagcgc atcaacgacg tgaagatccg cgccaagggc gagggccgct
     1081 cgatcctcga cggcgagatc accaccgcct gcatggcggg ttgcccctcg gacgccatcg
     1141 tcttcggcga cctgaagaat cccaagagca aggtcgccca gctggtggcc gccagccgcg
     1201 cctaccgcgt gctggaggag gtgggcgcca agcccgccat cacctacctg gccgacctga
     1261 agaatcccgc cctcgaggga ggttcccatg cgcactgacg ccgtccacgc cggcgccatt
     1321 ccggaagccc tgatcgagcc ctccctcacg gtgggcaagg tcacgcccgg cagcctcgac
     1381 gatcaggtgc tggccttccc cgagaccaag ccccccaggc agtggtatct gggcctcgcc
     1441 atcaccctga cggcgctctt catcggcctc ggcttcatcg gctacacctt tgtcaccggc
     1501 atcggcgcct ggggcaacaa cagccccgtg ttctgggcct tcgacatcat caacttcgtg
     1561 ttctgggtgg gcatcggcca cgccggcacc ctgatctcgg ccatcctctt cctgttccgg
     1621 aagcgctggc gcaacgccat cgcgcgcttc gccgaggcca tgacgatctt cgccgtcatg
     1681 tgcgccgtga tcttcccgct gatccacgtg ggcaggccct ggctggcctt ctggctcttc
     1741 ccctacccga accagcgcgc cctctggacc aacttccggt cgcccctgct ctgggacgtc
     1801 ttcgcggtga acacctactt ctccgtgtcg ctgatgttct ggtacctggg cctgatcccc
     1861 gacatcgcct ccatgcgcga ccgcaccacc agcaagctcc ggaaggccat ctacacggcg
     1921 ctggccatgg gctggcgcgg agccgcctcc cactggcagc actacgagaa ggcctacctg
     1981 ctgctggcgg gcctcgccac gggcctggtg ctctcggtgc actccgtggt gagcttcgac
     2041 ttcgccacct ccgtggtgcc cggctggcac atgaccatct tcccgcccta cttcgtggcg
     2101 ggcgccatct tcgccggctt cgccatggtg gtgatcgtgc tggtggtggt gcgcgagacc
     2161 atgcagctga agaacctcat caccatgcgc cacctggacg tgatgaacaa ggtgatcctc
     2221 gccatgagct gcatcatggg ctacagctac atgatggaag gcttcacggc ctggtactcc
     2281 atgaacgagt tcctccacca cggcttcatg aacatcatca gcggcaccta cggctgggcg
     2341 ggctggctca ccatcttctg caacatcctc ttcccgcaga tcctctggtt caggaaggcc
     2401 cgggcgagct acttctggat gatcatggtg gccctcggcg tgactgtcgg catgtggttc
     2461 gagcgcttcg tgatcatcgt gatctcgctg caccaggact acctgccctc cgcctggcgc
     2521 atctacaagc ccaccatgac cgatttcggc atcctgctcg gcaccttcgg actcttcttc
     2581 accctggtcc tgatcttcgc ccgggtgctg ccggtcatcg ccaccaccga agtgaaggcg
     2641 atcctgccgg acgcgcagcc ttctcaccat ggagacgacc accatgcctg agacctcgta
     2701 cgccgtcctc ggcatcttcg acacgcccga cgccctcatg aaggccatcc ccaaggcgcg
     2761 cgccagcaag ctgggcgccg tcgaggccta caccccctat cccatccacg gcatcgatga
     2821 cgccctgggc ctgcgccgct cgcccctggg cggcatggtg ctggtcatgg gcatcctggg
     2881 ggccctcacg gccttcggct tccagtactg gatcagcgcc atcgactacc cgatcatcac
     2941 cggcgggaag ggcgcgggct cctgggaggc cttcatcccc atcatgttcg aagtgacagt
     3001 gctcttcgcc accttcaccg cgggcctggg gatgctgttc ctgctcaacc ggctgccctt
     3061 cttcgggcat ccggtgctct cctccaagtc cgtcaagggc atcacgcgcg accgctatgc
     3121 cctggccctc gaggccgaaa gcgaaggctt cgacagcgcc gccgcggcca gggtcctgca
     3181 ggaggcgggc gccaccgagg tcgagatcct cccggctccg gaccgcagcc ccttcctcac
     3241 cagcgccttc atcctccgcg tcgccgccgg catcttcggg gcctgcgtgg tggctggcat
     3301 cgccatgttc ctggtcacca agtggttccc gctgctggcg cccatgaaat acatgcagga
     3361 ccagccccgc ctcaacgccc agaagccctc cgccttcttc aaggatggcc atggcatgca
     3421 gcggcccgtc gcgggcaccg tggcccgggg gcacctgccc acggccacgg gcacccagga
     3481 ggcggcggcc accctcgtga accccctg
//
LOCUS       DATGWW010000355         1519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_110129, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000355 DATGWW010000000
VERSION     DATGWW010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110129"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            229..>1519
                     /locus_tag="VK150_05160"
     CDS             229..>1519
                     /locus_tag="VK150_05160"
                     /inference="COORDINATES: protein motif:HMM:NF009057.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrpB-like pyridoxal phosphate-dependent enzyme"
                     /protein_id="HLP30729.1"
                     /translation="MADTKILLSENEIPTHWYNVVADMPNPPTPPLGPDGKPISPDAL
                     TAIFPMALIEQEVSAERWIKIPDEVREIFRLWRPSPLFRAHRLEQALGTPCKIYYKYE
                     GVSPAGSHKVNTSVPQAWYNKQAGIKRLTTETGAGQWGSSIALAGQMFGLEVRVYMVK
                     VSYDQKPFRRSMMQTWGAEVLASPTHMTEAGRKILAQDPNSPGSLGIAISEAVEEAAS
                     RPDTNYALGSVLNHVLLHQTIIGQEAKKQFEKAGDYPDMIFAPCGGGSNFGGVAFPFF
                     ADKATGKKVRLVAVEPTSCPTLTKGHYAYDFGDSSGYTPLMKMYTLGHDFVPPGIHAG
                     GLRYHGDSALVSQLYHEKLIEAVAVPQLATFRAGVQFAKAEGIIPAPESNHAIAACID
                     EAMRCKQTGEKKTLFFNLSGHGHFDMAAYDAYLAGETK"
BASE COUNT          286 a          576 c          414 g          243 t
ORIGIN      
        1 ccgtcgggtt acgctgcgct aacccgacct acgatttctg catccacctt cgattcgcct
       61 attcggcagg ccaggatgct cccgcaatag gcaagaaaac cattttttcc atttgcgttc
      121 atttgcgttc atttgcggac cttccccccg ttgaccacct ttgcgcaaag ggctaaaaag
      181 cggaacgccc ccgagtgggc gcccactttt ccagcgcgag gtgttgtcgt ggccgatacc
      241 aagatcctgc tcagcgagaa cgagatcccc acccactggt acaacgtggt ggcggacatg
      301 cccaatccgc ccaccccgcc cctcggcccc gacggcaagc ccatcagccc cgacgccctc
      361 accgccatct tccccatggc cctcatcgag caggaggtct cggcggaacg ctggatcaag
      421 atccccgatg aggtgcgcga aatcttccgc ctctggcgcc cctcgcccct gttccgcgcc
      481 caccgcctgg agcaggccct cgggacgccc tgcaagatct actacaagta cgaaggcgtg
      541 agccccgccg gctcccacaa ggtcaacacc tccgtgcccc aggcctggta caacaagcag
      601 gcgggcatca agcggctcac caccgagacg ggcgccggcc agtggggctc ctccatcgcc
      661 ctcgccggcc agatgttcgg cctcgaagtg cgcgtctaca tggtgaaggt cagctatgac
      721 cagaagccct tccgccgctc catgatgcag acctggggcg ccgaggtgct ggcgagtccc
      781 acccacatga ccgaggcggg ccgcaagatc ctggcccagg accccaactc cccgggctcc
      841 ctcggcatcg ccatttccga agcggtggaa gaagcggcat cgcgccctga caccaactac
      901 gccctcggtt cagtgctcaa ccacgtgctg ctgcaccaga ccatcatcgg tcaggaggcg
      961 aagaagcagt ttgaaaaggc cggcgactat cccgacatga tcttcgcccc ctgcggcggc
     1021 ggctccaact tcggcggcgt cgccttcccc ttcttcgccg acaaggccac cggcaagaag
     1081 gtgcgcctgg tggccgtgga gcccacctcc tgccccaccc tgaccaaggg ccactacgcc
     1141 tacgacttcg gcgacagctc cggctacacg ccgctgatga agatgtacac cctgggccac
     1201 gacttcgtgc cccccggcat ccacgccggc ggcctgcgct accacggcga ttcggccctg
     1261 gtgtcgcagc tctaccacga gaagctgatc gaagcggtgg ccgtgccgca gctcgccacc
     1321 ttccgcgccg gcgtccagtt cgccaaggcc gaggggatca tccccgcccc cgaatcgaac
     1381 cacgccatcg ccgcgtgcat cgacgaggcc atgcgctgca agcagaccgg cgagaagaag
     1441 accctcttct tcaacctctc cggccacggc cacttcgaca tggccgccta cgacgcctac
     1501 ctagccggcg aaaccaaag
//
LOCUS       DATGWW010000356         1628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_73366, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000356 DATGWW010000000
VERSION     DATGWW010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73366"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..853
                     /locus_tag="VK150_05165"
     CDS             146..853
                     /locus_tag="VK150_05165"
                     /inference="COORDINATES: protein motif:HMM:NF021443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LiaF domain-containing protein"
                     /protein_id="HLP30730.1"
                     /translation="MTPEDAKAPSPFSPKLVLGVAIIVAGLVLTLDNLGLIEAHTIFK
                     LWPLVLVAMGIAKIRQDRSGGGMGGWFLVLGGVFLLLFTFSRGHLAEALAPMLVVAVG
                     ILIVVKALKQSRGVPPELAKSDDFLQGTAIFGGFKRRVLTQAFKGGELTAIFGGYEVD
                     LRQAALDSGQARIDVFVLFGGGEIRVPDGWEVSNRATAMFGALNDTTHHGPSPTEARP
                     RLVVTGLILFGGTEVKS"
     gene            853..>1628
                     /locus_tag="VK150_05170"
     CDS             853..>1628
                     /locus_tag="VK150_05170"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HLP30731.1"
                     /translation="MHPLLASRAKLGAYLLGWAPITLLLAGIARSQGWSSLEAGALAL
                     PLCLSAAFLFLSTWFLCRALPLGGTVEGLGAHGMAWGMAAVLMGGLWAGLAWLLARML
                     AWIPGLEALPQRVGNALPVLTGLGVLLYLASVALSYLMLAQERTLEAERKGAEAQMLA
                     QESELKALRAQLNPHFLFNSLNSLSALTAVDPARAREMCVLLSDFLRRSLGLGERRLV
                     ALREELDLAKAYLAIEQIRFGNRLHLTWTVDPAAEPALLPT"
BASE COUNT          210 a          615 c          529 g          274 t
ORIGIN      
        1 ccttcctggt ctggggcggg gtcatcgtca ccctgcgggc catcttcccc cagcccaagc
       61 gacagaaact gtccaagacg gtgcctccgc cgcccgcacc ccccgtatcc tgtgattctg
      121 atcccgattc ccggcaggtg aacccatgac ccccgaagac gccaaggccc ctagcccctt
      181 cagccccaag ctggtgctgg gcgtggccat catcgtggcg ggcctcgtgc tcaccctgga
      241 caacctcggg ctcatcgagg cccacacgat cttcaagctc tggcccctgg tgctggtcgc
      301 catgggcatc gccaagatcc gccaggatcg aagcggcggc ggcatgggcg gctggttcct
      361 ggtgctgggc ggcgtcttcc tgctgctctt caccttctcc cggggccacc tggccgaggc
      421 cctcgcgccc atgctggtgg tggccgtggg catcctcatc gtggtcaagg cgctgaagca
      481 gagccggggc gtgccgccgg agttggcgaa gtccgacgat ttcctgcagg gcaccgcgat
      541 cttcggcggc ttcaagcggc gcgtgctcac ccaggccttc aagggcggcg agctcaccgc
      601 catcttcggc gggtacgagg tggacctccg ccaggccgcg ctggattcgg gccaggcgcg
      661 cattgatgtg ttcgtgctct tcggcggcgg cgagatccgc gtgcccgacg gctgggaggt
      721 ctccaaccgc gccaccgcca tgttcggcgc cctgaacgac accacccacc acggaccaag
      781 ccccacggaa gcccgtcccc gcctggtggt gaccggcctg atcctcttcg ggggaacgga
      841 agtgaagagc tgatgcaccc cctgctggcc agccgggcga agctgggggc ctacctcctc
      901 gggtgggccc ccatcacgct gctcctcgcc ggaatcgccc ggagccaggg ctggagctcc
      961 ctggaggcgg gcgccctggc cctgcccctc tgcctgtcgg cggccttcct cttcctgtcc
     1021 acctggttcc tctgccgggc ccttcccctg ggcggcaccg tcgagggact cggcgcccac
     1081 ggcatggcct ggggcatggc cgcggtactc atgggcggtc tctgggcggg cctcgcctgg
     1141 ctgctggccc gcatgctggc ctggatcccg ggcctggagg ccctgcccca gcgtgtgggc
     1201 aacgccctcc cggtgctgac cggcctgggc gtcctcctct acctggcctc ggtggccctc
     1261 agctacctca tgctcgccca ggagcggacc ctcgaagccg agcgcaaggg cgccgaggcg
     1321 cagatgctgg cccaggaatc cgagctgaag gccctgcggg cccagctgaa tccgcacttc
     1381 ctcttcaaca gcctgaattc gctctcggcc ctcacggcgg tggatccggc ccgcgcccgg
     1441 gagatgtgcg tcctgctgtc cgatttcctc cgccgcagcc tcggcctggg cgaacgccgg
     1501 ctggtggccc tgcgggagga gctcgacctc gccaaggcct acctcgccat cgagcagatc
     1561 cgcttcggga accgcctgca cctgacctgg actgtggatc cagccgcgga gcccgccctg
     1621 ctgcccac
//
LOCUS       DATGWW010000357         2995 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_435342, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000357 DATGWW010000000
VERSION     DATGWW010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435342"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..323)
                     /locus_tag="VK150_05175"
     CDS             complement(<1..323)
                     /locus_tag="VK150_05175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30732.1"
                     /translation="MARPTKDREIQVQKPAQSLAHFQTKLGQGDDDEGTLLKPILIGL
                     ASLVVLGVAYGGWSTWRSQAIEKHEAALSALQMEVEGDGLKPVAPAEVEKRMRENLGR
                     LETLAA"
     gene            429..504
                     /locus_tag="VK150_05180"
     tRNA            429..504
                     /locus_tag="VK150_05180"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:462..464,aa:Phe,seq:gaa)
     gene            complement(638..1237)
                     /locus_tag="VK150_05185"
     CDS             complement(638..1237)
                     /locus_tag="VK150_05185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30733.1"
                     /translation="MSKLTHLAALLAGSALAFSLACKTSKPDTSRVIANVGGEKITEA
                     EFQDVVKTLSQSPKDAEVFLTDPAAREERAQLASRIAMSKAITAFAKQTGLDLEPSVK
                     RQLEQQQANVYFQALAKKRMTSVDPTDEQLMAFYKEQVDRMKAQGHAQAVPPFETVKA
                     QVAEGWKQQRMATISQDIQKEVKAKVPVTLADDYRPAGE"
     gene            1293..1586
                     /locus_tag="VK150_05190"
     CDS             1293..1586
                     /locus_tag="VK150_05190"
                     /inference="COORDINATES: protein motif:HMM:NF012675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HLP30734.1"
                     /translation="MSRIDALEGLELAVYSATWCPDCRRLEAWLAENQVPHTKVDIES
                     VPGAAEKLEAETGKRAIPFVLVNGKRWVRGYHKELSQRLDGDLLVEELVAAGK"
     gene            1667..2710
                     /locus_tag="VK150_05195"
     CDS             1667..2710
                     /locus_tag="VK150_05195"
                     /inference="COORDINATES: protein motif:HMM:NF010539.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HLP30735.1"
                     /translation="MASIFSSQFWSNLFNSDLAIDLGTASTLIHTKQAGRIVIYEPSI
                     VAVNTLTHEVEAVGDEAKQLLGRAPQGVRTIRPMKDGMIFEVDAAEKMLAQFIAKARP
                     NRGIARTRIVVSVPPRAHQVARRAVKQVCYDAKAGEVFLVDQTMVAAIGAGLAINEKR
                     GCMIVDIGGGTTDVAVISYNGKVFSDSILIAGDEMDEAVIKYIREKYNVLISEASAEE
                     VKWTLGSAFPSELTRTMEVSGRDQFEGLPKTLTLNDAEIREALAEPINAIIDLVRKAL
                     NETPPQLAADLIDRGICLTGGGSLIQGLDERLRKETHLPVFRAEDPQTAVVRGTALLL
                     ENIPLLRRIQILD"
     gene            2723..>2995
                     /locus_tag="VK150_05200"
     CDS             2723..>2995
                     /locus_tag="VK150_05200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30736.1"
                     /translation="MAVRAVRWGWSRARWQRLALALLWLGQGVWVFLGPNPGRHWTRL
                     AEVVSRPSQSLAARWDGWRANRRISARDMAEIRAENARLAAELAQMK"
BASE COUNT          484 a          979 c         1016 g          516 t
ORIGIN      
        1 gccgcaaggg tctcgaggcg accgaggttc tcgcgcatcc gcttctccac ctccgccggg
       61 gccacaggtt tcaggccgtc gccttccacc tccatctgca gggcggagag ggctgcttcg
      121 tgtttctcga tggcctggga acgccaggtg ctccagcctc cgtaggccac tccgagaacg
      181 accagggagg cgaggccgat caggatgggt ttcagcaggg tgccttcgtc gtcatcaccc
      241 tggcccagct tggtctggaa gtgcgccagg ctctgggcgg gcttctggac ctggatttct
      301 cggtctttgg tgggacgggc catgtcgtac ctctggaatg gaacagcact cggaccatag
      361 aggatgcacc aatcccctcc cgtccggcac ttgaaaatgc agtcccggct ggtatgctgg
      421 tcgttcccgc ctgggtagct cagttggtag agcaatggat tgaaaatcca tgtgtcggcg
      481 gttcgattcc gtctccaggc accaggaatc acggcccccg ttcgggggcc ttttgcttgc
      541 cccggggcgg gcgcgcctgc gtccgggcga ctgaaataac gggagcccgc gctgaggcgg
      601 gctccggcag gctccatgaa tgaggtgggg atggcggcta ttccccggcg gggcggtagt
      661 cgtcggccag cgtgacgggc accttggcct tgacctcttt ctggatgtcc tggctgatcg
      721 tcgccatgcg ctgctgcttc cagccctcgg ccacctgcgc cttcacggtc tcgaagggcg
      781 gcacggcctg ggcgtggccc tgggccttca tgcggtccac ctgctccttg tagaaggcca
      841 tcaactgctc gtcggtggga tccaccgagg tcatgcgctt cttggcaagg gcctggaaat
      901 acacattggc ctgctgctgc tcgagctggc gcttcacgga gggctccagg tcgaggcccg
      961 tctgcttggc gaaggccgtg atggccttcg acatggcgat gcggctggcc agctgggcgc
     1021 gctcttcgcg ggccgcgggg tccgtgagga agacctcggc gtccttgggg ctctgggaca
     1081 gggtcttcac cacatcctgg aactcggctt cagtgatctt ctcgccgcca acgttcgcga
     1141 tgacgcggct cgtgtcgggc ttgctggtct tgcaggccag ggagaaggcg agggccgacc
     1201 cggcgagcag ggcggcaagg tgggtcagct tggacatgga tttcccccga agagcatcaa
     1261 aggatccaga atgacaggtc cgggaggatc ccatgagccg aattgacgcc ctcgaaggcc
     1321 tggaactggc cgtctacagc gccacctggt gcccggattg ccgtcgcctg gaggcctggc
     1381 tggcagaaaa ccaggtcccc cacacgaagg tggatatcga gtccgtgccc ggggccgccg
     1441 agaagctcga ggccgagacc ggcaaacggg ccatcccctt cgtgctggtg aatgggaagc
     1501 gctgggtccg gggctaccac aaggaactgt cccagcgcct cgacggggac cttctggtgg
     1561 aggagctggt cgcggccggg aagtgactcc gcccccgagg gagcttgcct gggatggtga
     1621 aggcgggcgg ttcgtggcac cctaggaggt tctccgggag tccccagtgg ccagtatttt
     1681 ttccagccag ttctggtcca acctgttcaa ttcggacctg gccatcgatc tcggcacggc
     1741 ctcgaccctg atccacacga aacaggcggg ccgcatcgtc atctacgagc cttccatcgt
     1801 ggccgtgaac accctgaccc acgaggtcga ggccgtgggc gacgaggcca agcagctgct
     1861 gggccgggcc ccccagggcg tgcgcaccat ccggcccatg aaggacggca tgatcttcga
     1921 ggtcgatgcc gccgagaaga tgctggccca gttcatcgcc aaggcccggc cgaaccgcgg
     1981 catcgcccgc acccgcatcg tcgtcagcgt cccgccccgg gcccaccagg tggcccgccg
     2041 cgcggtgaag caggtctgct acgacgccaa ggccggcgag gtgttcctgg tggaccagac
     2101 catggtggcg gccatcggcg ccggcctcgc catcaacgag aagcgcggct gcatgatcgt
     2161 cgacatcggc ggcggcacca cggatgtggc cgtcatcagc tacaatggca aggtgttctc
     2221 cgattccatc ctcatcgccg gcgacgagat ggacgaggcg gtgatcaagt acatccgcga
     2281 gaagtacaac gtgctcattt ccgaggcttc ggccgaggaa gtgaagtgga cgctgggttc
     2341 cgccttcccc tccgagctca cccgcaccat ggaagtgagc ggccgggacc agttcgaagg
     2401 gctgcccaaa accctcaccc tcaacgacgc ggagatccgc gaggcgttgg ccgagcccat
     2461 caacgccatc atcgacctgg tgcgcaaggc cctgaacgag accccgcccc agctcgcggc
     2521 cgacctcatt gaccgcggca tctgcctcac cggcggcggt tcgctcatcc agggcctgga
     2581 cgagcggctg cgcaaggaaa cccacctgcc ggtcttccgc gccgaggatc cgcagaccgc
     2641 cgtggtgcgc ggcaccgccc tgctgctgga aaacatcccg ctgctccgcc gcatccagat
     2701 cctggactag cctggagggc gcatggccgt ccgcgcagtc aggtggggat ggagccgcgc
     2761 gaggtggcag cgcctcgccc tcgccctgct gtggctgggg cagggcgtct gggttttcct
     2821 ggggccaaat ccgggcaggc actggacgcg cctggcggag gtggtttcgc gcccttcgca
     2881 gagcctcgcc gcccgctggg acggctggcg ggccaaccgc aggatcagcg cgcgggacat
     2941 ggccgagatc cgggcggaga atgcccgcct ggccgctgag ctcgcgcaga tgaag
//
LOCUS       DATGWW010000358         2091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_149477, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000358 DATGWW010000000
VERSION     DATGWW010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149477"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..415)
                     /locus_tag="VK150_05205"
     CDS             complement(<1..415)
                     /locus_tag="VK150_05205"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HLP30737.1"
                     /translation="MRLLHRHPEGFDPAAPWVQDSESIRQDSRLFRQIVAQRRSPHTG
                     REHAFYRLQGPDWVNVVAFTRAGELLVVEQFRHGIDAATLEIPGGGCDPGEVPLDAAR
                     RELREETGFRSGQWVALGSCTPNPATQNNRCHTFLA"
     gene            complement(415..675)
                     /locus_tag="VK150_05210"
     CDS             complement(415..675)
                     /locus_tag="VK150_05210"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HLP30738.1"
                     /translation="MQRVDVREPWEFALTRIPGAVLIPLGELAARTGELDPSRPVAAY
                     CHHGARSLRALQILQSAGFEDIAHLAGGIDAYSRMDPAVPRY"
     gene            complement(725..1378)
                     /gene="udk"
                     /locus_tag="VK150_05215"
     CDS             complement(725..1378)
                     /gene="udk"
                     /locus_tag="VK150_05215"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: protein motif:HMM:NF004018.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004849 - uridine kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HLP30739.1"
                     /translation="MTDRPMLVGIVGGSGSGKTSVAVELVKRLRKKAVATLLLDMDAY
                     YAPLEVVKGRFDGRPVNWDHPHAFDLELMAAHLSALHRSESIRKPRYDFTLSDRTGWE
                     EPLPPGQVVILEGLLLFALPELRDQLDVKVFVDTDADIRILRRIRRDTKERGRSLDSV
                     MDQYENSVRPMHLEFVEPSKRWADLIVPTGVENRTALDIITHHICSRVLSSGEAQRV"
     gene            1443..>2091
                     /locus_tag="VK150_05220"
     CDS             1443..>2091
                     /locus_tag="VK150_05220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30740.1"
                     /translation="MSTRHGQGFHLGGPWQAGVRVALALGLLLALGGCSSEDPRLPAN
                     LYEEARKLNLEGRSLEARAMMRQLAERYPDSEAAQQAKRDLYLIEAFVNRDMADRQKQ
                     VRAAMKRLTDALIRYKAKKGEYPLSTGELVPEYLDQVPETPWGHPFLYRAYVTRPIED
                     LPTKRGPARQRFNTKLDGYYLACLGTDLLPGGEGLAADTLIKDGALWGEPSFPAVP"
BASE COUNT          326 a          748 c          697 g          320 t
ORIGIN      
        1 gggccaggaa ggtgtggcag cggttgttct gagtcgccgg gttcggcgtg caggagccca
       61 gggccaccca ctgcccggag cggaatcccg tctcttcccg cagctcccgg cgggccgcgt
      121 cgagagggac ctcaccggga tcgcagcccc cgcccggaat ctccagggtg gcggcgtcga
      181 tgccatggcg gaactgctcg accaccagca gctccccggc tcgcgtgaag gccaccacgt
      241 tcacccaatc cgggccctgc agccggtaga aggcgtgttc ccggcccgtg tgggggctgc
      301 ggcgctgggc cacgatctga cggaacaggc gcgagtcctg ccgaatgctt tccgagtcct
      361 gcacccacgg cgccgcggga tcgaatccct ccgggtggcg gtggagcagg cgcatcagta
      421 cctcgggacg gccgggtcca tccggctgta ggcatcgatg cccccggcca gatgcgcgat
      481 gtcttcgaat ccggcggact ggaggatctg cagcgcccgg aggctgcggg cgccgtggtg
      541 acagtaggcg gcgacgggcc tggaagggtc gagctcgccg gtccgggccg ccagctcgcc
      601 cagcgggatg agcacggcgc cgggaatgcg ggtcagcgcg aactcccagg gctcgcggac
      661 atccacccgc tgcacggcat ccggcaggtc gcggtaggct tccggagtaa ggttgtggcc
      721 ctactcaaac acgctgggcc tctccggagc tgagcacccg gctgcagatg tggtgggtga
      781 tgatgtcgag ggccgtgcgg ttctccacgc ctgtgggcac gatgaggtcg gcccagcgct
      841 tgctgggttc cacgaactcg aggtgcatgg ggcggacgct gttctcgtac tggtccatga
      901 cactgtccag gctccggccc cgttccttgg tgtcgcggcg gatgcggcgc aggatccgga
      961 tatcggcatc cgtgtccacg aagaccttca cgtccagctg gtcccgcagt tccggcagcg
     1021 cgaacagcag caggccttcg agaatcacca cctgccccgg aggcagcggc tcttcccagc
     1081 ccgtccggtc ggagagggtg aagtcgtacc ggggcttgcg gatgctctcg ctgcgatgca
     1141 gggccgacag gtgcgcggcc atgagttcca gatcgaaggc gtggggatga tcccagttca
     1201 cgggtcgacc gtcgaagcgg cccttcacca cctccagcgg cgcgtagtag gcgtccatgt
     1261 ccagcaggag cgtcgccacg gccttcttcc ggaggcgctt caccagctcc actgccaccg
     1321 aggtcttgcc gctgccggac ccccccacga tgcctaccag catcggcctg tccgtcatgg
     1381 cgcccccctt cctccctcca tcctacttca aggcgggccc aggctctgct atggttcggt
     1441 ccatgagcac gcggcatggg cagggcttcc acctcggcgg accatggcag gcaggagtac
     1501 gcgtcgccct tgccctgggt ctgctgctcg ccctcggcgg ctgcagctcc gaagaccccc
     1561 gcctgcccgc caacctctac gaagaggccc ggaagctcaa cctggagggc cgcagcctgg
     1621 aagcccgggc catgatgcgg cagctggcgg agcgctaccc ggattccgag gcggcccagc
     1681 aggccaagcg ggacctctac ctcatcgagg ccttcgtcaa ccgcgacatg gccgaccgcc
     1741 agaagcaggt gcgggccgcc atgaagcgcc tgaccgacgc gctcatccgc tacaaggcca
     1801 agaaggggga ataccccctc tccaccggag agctggttcc cgaatacctc gaccaggtgc
     1861 ccgaaacgcc ctggggccac cccttcctct accgggccta cgtcacccgc cccatcgagg
     1921 acctgcccac caagcgggga ccggcccgcc agcggttcaa caccaagctc gacggctact
     1981 atctggcctg cctgggcacc gacctgctgc ctgggggcga gggcctcgcc gccgacaccc
     2041 tcatcaagga cggcgccctc tggggcgagc ccagcttccc ggcagttccc c
//
LOCUS       DATGWW010000359         1574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_149520, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000359 DATGWW010000000
VERSION     DATGWW010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149520"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1219
                     /locus_tag="VK150_05225"
     CDS             <1..1219
                     /locus_tag="VK150_05225"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30741.1"
                     /translation="YATPLRDRAGRIHGAVCCVVDVTGIRHAEEALAKAQKMESLGML
                     SSGLAHDFNNIFQTMVANLDMARSALPEGARAHPYLQRLQAGLDRASRLSRDILHCSG
                     GDLRRPESVDLGPLVAEALDGTGLTVARDLPGQLPKVMVDPVLVGRVVEGLVTNALEA
                     GSPATAIRVRVCVRAVTEGDLATGLWPEPVAPGAYVVLEVSDQGHGIDSATLPRIFDP
                     FFSTRDLGRGLGLAATLGIVRGHHGGIQVESIPGVGSVFRVHLPAPEGPEAPRQVTLD
                     GAGRHHLVLLADDEAELRAVMAEMLEDWFDLEVVTASDGQEALDIFRQRPEAFDLVIL
                     DATMPRMGGVVAFAAMRERRPGLPGILCSGYALPASREQAVTQGFADFLKKPFSSAEL
                     ENLLGRVLGVHQK"
     gene            complement(1238..>1574)
                     /locus_tag="VK150_05230"
     CDS             complement(1238..>1574)
                     /locus_tag="VK150_05230"
                     /inference="COORDINATES: protein motif:HMM:NF017568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="5'-nucleotidase domain-containing protein"
                     /protein_id="HLP30742.1"
                     /translation="VRRHVLGPRLSSDAALALDQEAAQLAASVEALQRRAEVQNLEVD
                     RLMHAVEAAYNPMWGPIFRDRDELTRFADQIQQFACAYTGRVGNLYMYDPLATVYAPL
                     PALPHERLD"
BASE COUNT          213 a          535 c          587 g          239 t
ORIGIN      
        1 ctacgcgacg cccctgcggg accgggcagg ccgcatccac ggcgcggtgt gctgcgtggt
       61 ggatgtcacg gggatccgcc acgctgagga ggctctggcc aaggcccaga agatggagag
      121 cctcggcatg ctttccagcg ggctcgccca cgatttcaac aacatcttcc agacgatggt
      181 ggcgaacctg gacatggccc gttcggccct gcccgagggt gcccgcgccc acccctacct
      241 gcagcggctc caggcggggc tggaccgcgc ctcccgtctg agccgcgaca tcctccactg
      301 ctcaggcggg gacctgcgcc ggccggaatc cgtggacttg ggccccctgg tcgccgaggc
      361 cctcgacggg acgggcttga ccgtggcccg tgacctgccc ggccagctgc ccaaggtcat
      421 ggtggatccg gtcctggtgg gccgggtcgt cgagggcctc gtcaccaatg ccctggaggc
      481 gggctcaccg gcgaccgcca tccgggtgcg ggtctgcgta cgcgccgtga cggagggcga
      541 tctggccacc gggctctggc ctgagccggt ggcgccgggc gcctacgtgg tgctggaggt
      601 atccgaccag gggcacggga tcgactcggc caccctcccg cgcattttcg accccttctt
      661 ctccacccgc gatctgggcc gggggttggg cctggcggcg accctcggca tcgtgcgggg
      721 gcaccacggg ggcatccagg tggagagcat ccccggggtg ggaagcgtgt tccgggtgca
      781 cctccccgcg ccggaaggcc cggaggcgcc ccgacaggtg acgctggatg gcgccgggag
      841 gcatcacctc gtgctgctgg ccgacgacga ggcggagttg cgggcggtga tggccgagat
      901 gctggaggac tggttcgatc tggaggtggt gaccgcctcg gatgggcagg aggcgctgga
      961 catcttccgg cagcgaccag aggccttcga cctggtgatc ctcgacgcca ccatgccgcg
     1021 gatgggcggc gtggtggcct tcgcggccat gcgggagcgc cggcctggcc tgcccggcat
     1081 cctgtgcagc ggctacgccc tgccggcttc ccgcgaacag gcggtgaccc aggggttcgc
     1141 cgatttcctg aagaaaccct tcagcagcgc cgagctggag aacctgctcg ggcgcgtgct
     1201 gggcgtccat cagaagtagc cgtcccgccg ggccaggtca gtccaggcgt tcgtggggca
     1261 gggcgggaag gggcgcgtac acggtggcca ggggatcgta catgtagagg tttccgaccc
     1321 gccccgtgta ggcgcaggcg aactgctgga tctggtcggc gaaccgcgtc agctcgtcgc
     1381 gatcacggaa gatgggcccc cacatggggt tgtaggccgc ctccaccgca tgcatgaggc
     1441 ggtccacttc caggttctgc acttccgccc ggcgctggag cgcctccacg ctggcggcga
     1501 gctgcgcggc ctcctggtcc agggccaggg cggcgtcgga gctcaggcgg gggcccagca
     1561 catgccggcg cacc
//
LOCUS       DATGWW010000360         2818 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_435598, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000360 DATGWW010000000
VERSION     DATGWW010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2818
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435598"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="VK150_05235"
     CDS             <1..266
                     /locus_tag="VK150_05235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30743.1"
                     /translation="RRYDHRNRTHIKEWWRSEFRQPRTGILIGFRTLANGTIDLGDYD
                     KPTTFKATEHFKAALVVFNAKTKPVFVHLDDLTNEIIMPQVKA"
     gene            644..1021
                     /locus_tag="VK150_05240"
     CDS             644..1021
                     /locus_tag="VK150_05240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30744.1"
                     /translation="MPKEEAIQEVLRYINATPEMQSILYDIDLLPEQTMKHPGNWMRT
                     CMVVQIYQHAIKQEARVAELGAQLSPLNTCDLADFIGPTKPCPFCGSTALTRDGFEEY
                     IICQNCGGSAPVGGWQFRAIDKP"
     gene            1159..1407
                     /locus_tag="VK150_05245"
     CDS             1159..1407
                     /locus_tag="VK150_05245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30745.1"
                     /translation="MTIPRDKILHSLAGLLAGAAIAIHATAWWEPLAAAALLGILKEG
                     FDAAWNRWVRPEHSVDLFDALATTAGGIIPALVLAFRA"
     gene            complement(1409..1753)
                     /locus_tag="VK150_05250"
     CDS             complement(1409..1753)
                     /locus_tag="VK150_05250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30746.1"
                     /translation="MTRLVPSPRVVRPWDAWCAEVEAAIKAQGRWAGSHAAVLGWAQE
                     KLNVRSAQDRKRSPIEGWDTPEGLLARWVRLRRLDMMVVGNQLVVRARPLPARKVAPN
                     VPAPGPMLLEDE"
     gene            2054..>2818
                     /locus_tag="VK150_05255"
     CDS             2054..>2818
                     /locus_tag="VK150_05255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30747.1"
                     /translation="MVLPEGLVAELKKRAKAKRRNGIFHRGGDSYLFRKKIRGHLYQI
                     PFRAGSSKDAKLVYDQILLEISLGLHGGGKAPDLSSIIEGWCRLHRKQEDHVKNARWA
                     EEALKDVPKGMTPLPDLPLPSITTERVETWICHYQDGRSPATINHVLRYLKLWMRWAV
                     KRKTPGLPGMPYDVPMRKVERVAKPVVKIPHQDAFFQGVDCIRTWVRVSQLADLEVRV
                     AVRMMLGLGLREKEVLGARREWLDLDARTYTVGKAKG"
BASE COUNT          531 a          972 c          843 g          472 t
ORIGIN      
        1 cccgccgcta cgaccaccgc aaccggaccc acatcaagga gtggtggcgc tccgaatttc
       61 gccagccccg caccggcatc ctgatcgggt tccgcaccct tgccaacggg accatcgacc
      121 tcggcgacta tgacaagccg accacgttca aggccaccga gcatttcaag gccgcgctgg
      181 tcgtgttcaa cgccaagacc aagcccgtgt tcgtccacct ggacgacctg accaacgaaa
      241 tcatcatgcc ccaggtgaaa gcctgaggct gtccaggaga ctgcccgtga accacctttt
      301 caaccgatgc aacgtgggtg atgagcatgg gcggtttcgc ggaaccgtgg accggatgac
      361 ccgcgaggac gccgaggatg ccatagcgaa gttcttcggc ttccaggcgt tcccggctgg
      421 ttggaccctt tccactggac gcagaccttc tgaacttcaa cccgactacc ttcactgatc
      481 ttgtccacct ggaggacgca tgtggaaacc ccgtctcgcc cgtgtctggt gcttcctgtg
      541 gtgggggcac tacccccaac cggggcgcaa ggaagtcggc atctgccacc gctgcggagc
      601 atggctcctt ggctctgatt aactcttgtc caggagcctg acgatgccca aagaagaagc
      661 catccaggaa gtcctgcgtt acataaacgc cacccctgaa atgcaatcca ttctctacga
      721 catcgacctt ctgcccgagc agaccatgaa gcaccccgga aactggatgc gaacctgcat
      781 ggtggttcag atttaccaac acgccatcaa gcaggaagcc agggtcgcgg aactgggggc
      841 gcagcttagc ccgttgaaca cctgtgatct ggccgatttt atcggcccta cgaagccctg
      901 cccgttctgc gggtccaccg ccctaacgcg ggacggattc gaggaataca tcatctgcca
      961 gaactgcggc ggatcagccc cggttggcgg ctggcagttc cgcgccatcg acaaaccgta
     1021 actgtccatg ctcaccgtcc gcagaatcgc ccaacacctc atcccgaccg tgcccgagcg
     1081 cgaagtcctc gccatggttt gggacatcaa ccccgatgcg ctcccctact ggggcgcgtg
     1141 aatctgccca ggaccccaat gaccatcccc cgcgacaaga tcctccactc cctggccggc
     1201 ctcctcgcgg gggccgccat cgccatccac gccacggcct ggtgggagcc cctggccgcc
     1261 gctgcgcttc taggcatcct caaggagggc ttcgacgccg cctggaaccg ctgggtccgg
     1321 cccgagcact ccgtggatct gtttgacgcc ctcgccacca ccgccggggg gatcatcccg
     1381 gccctggtac tggccttccg cgcatgatct actcgtcctc cagcagcatc gggcccggag
     1441 cgggaacgtt gggcgcgacc ttcctggccg ggagaggccg ggccctgacc acaagctggt
     1501 tgcccaccac catcatgtcg agcctgcgca ggcgaaccca tcgcgccagg aggccttccg
     1561 gcgtgtccca gccttcgatg ggcgatctct tccggtcctg ggcgctccgc acgttgagct
     1621 tttcctgggc ccagccaagg acggccgcat gggatcccgc ccagcgtccc tgcgccttga
     1681 tggccgcctc aacctccgcg caccaggcgt cccaggggcg aacgacgcgg ggggatggca
     1741 ccaggcgagt caccccgaga tcctagcacc accacccacc acccagcggc caccatgaac
     1801 cccgatcacc tgacccagca gaagttcatc attcggctcc gtgaggagct gggcatgcgc
     1861 gtctcttctg aacgcgtcca tgcctggatc ctggagggca tgcccacggc tccccgggga
     1921 ggcgccaaga agccccgttt catctgggaa ccggcactca actggatcct ccagggagcc
     1981 tccccatcca ccccgatcag gcaagaggtt cgcaaccgcc ttttcctggc cagcctgccg
     2041 aagggggcgt agcatggtgc tcccggaggg gctggtggcc gagctgaaga agcgagccaa
     2101 ggcgaagcgg cgcaatggga tcttccatcg tggtggggac agctatctct tcaggaagaa
     2161 gatccgggga cacctctacc agatcccctt ccgggccggg agttcgaagg acgcgaagct
     2221 ggtctatgac cagatcctcc tggagatctc gctgggcctg catggagggg gaaaggcccc
     2281 ggacctgtcc tccatcatcg aaggctggtg ccgcctgcat cggaagcagg aggaccacgt
     2341 caagaacgcc cgatgggctg aggaggccct gaaggatgtt cccaagggga tgacgcctct
     2401 tccggacctg cctctcccgt cgatcacgac ggagcgcgtg gaaacatgga tctgccacta
     2461 ccaggacggg cgatccccgg cgacgatcaa ccacgtcctg cgctacctca agctctggat
     2521 gcgctgggcc gtgaagcgca agacgccggg gctccctgga atgccctacg acgtgcccat
     2581 gcgcaaggtg gagcgcgtgg ccaagcccgt cgtgaaaatc ccccaccagg atgcattctt
     2641 ccagggcgtg gactgcatcc ggacgtgggt tcgcgtctcg cagttggccg accttgaggt
     2701 cagggtggcc gtccggatga tgctcggcct ggggctccgg gagaaggagg tcctgggcgc
     2761 caggcgcgaa tggctggacc tggacgcccg cacctacacc gtgggcaagg ccaagggg
//
LOCUS       DATGWW010000361         2863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_149604, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000361 DATGWW010000000
VERSION     DATGWW010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2863
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149604"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..442)
                     /locus_tag="VK150_05260"
     CDS             complement(<1..442)
                     /locus_tag="VK150_05260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30748.1"
                     /translation="MNLSTTYLGLKLAHPLMAGASPMVDDMGMVKRLEDAGASAIVMH
                     SLFEEQITREEQGTIMDMELHANSHAEAISYFPKPDDFRLGPESYLEQIRRIKQAVAV
                     PVIASLNGTTPAGWLHHGKLMQEAGADALELNVYYIPTDAKETAA"
     gene            complement(454..>2863)
                     /gene="nifJ"
                     /locus_tag="VK150_05265"
     CDS             complement(454..>2863)
                     /gene="nifJ"
                     /locus_tag="VK150_05265"
                     /inference="COORDINATES: protein motif:HMM:TIGR02176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HLP30749.1"
                     /translation="YANLAKDKPKNHFTVGIVDDVTNSSLDMDLEFDIEGAEVKRAMF
                     YGLGSDGTVGANKNSIKIIAEETPNYGQGYFVYDSKKSGAITISHLRFGPRPIKSAYL
                     VTKANFIACHQTSFLEKYEMLEPAAKGATFLLNTPHNAENVWDTLPKEVQSAIVEKQL
                     KFYVIDAYEVAKNTGMGVRINTIMQTCFFAISGVLPREEAIAQIKKAIKKTYGKKGDA
                     VVQQNYLAVDETLAHLHEVKVPTAVSSTRVRPPMVAAEAPDFVQRVTAVMMEGKGDLL
                     PVSAFPVDGTWPVGTTKWEKRNIALEIPEWDSSICIQCNKCAMVCPHAAIRAKVYDPA
                     ALAGAPETFKGVDYKGPEYKGQKYTIQVAPEDCTGCTLCVEVCPAKDKSNPKHKAIDM
                     VAQAPLREAEVANYKFFLDLPEVDRTTVKLDVKGTQFLEPLFEYSGACSGCGETPYIK
                     LLTQLFGDRTLIANATGCSSIYGGNLPTTPYTVNKDGRGPAWANSLFEDNAEFGLGLR
                     LSVDKHQEFALELMHRLGSKLGDELIAGLATADQTNEAGIKAQRERVEALKQKLSAMK
                     EPEAKMLLDLADYLVDKSVWVVGGDGWAYDIGYGGLDHVLASGRNVNVLVLDTEVYSN
                     TGGQASKSTPMGAGAKFAMAGKSMPKKDLGMIAMTYGGIYVAKVAFGFRDAQTVKAFQ
                     EAESYNGPSLILAYSHCIAHGYDLAHGADQQKLAVDSGHWPLFRFDPRRLDKGEAPLQ
                     LDSSAPKVPMLQYVRNETRYRMIEQQNPEHFQKLMAQAQLDTTNRYSVYEQLAKLSVT
                     AKHS"
BASE COUNT          411 a          815 c         1047 g          590 t
ORIGIN      
        1 gggcggcggt ttccttcgca tccgtgggga tgtagtagac gtttagttca agggcgtcgg
       61 cgccggcttc ctgcatcagc ttgccgtggt gcagccagcc cgcgggggtg gtgccattca
      121 gcgaggcgat gacgggaacg gccacggcct gcttgatgcg ccggatctgc tcgaggtacg
      181 attcggggcc caggcggaaa tcgtcgggct tggggaagta ggagatggcc tccgcatgcg
      241 agttcgcatg cagctccatg tccatgatgg tgccctgctc ttcgcgggtg atctgctcct
      301 cgaagaggga gtgcatcacg atggcggagg cgccggcgtc ttccaggcgc ttgaccatgc
      361 ccatgtcgtc gaccatgggg gaggcgcccg ccatcagggg atgggccagc ttcaggccga
      421 ggtaggtggt cgagaggttc atgtcgtcac ccttcagctg tgcttggccg tgacggacag
      481 cttggcgagc tgttcgtaga cggagtagcg gttggtggtg tcgagctgag cctgagccat
      541 gagcttctgg aagtgctcgg ggttctgctg ctcgatcatc cggtagcggg tctcgttgcg
      601 gacgtactgg agcatgggca ccttgggcgc gctcgaatcg agctgcaggg gcgcctcgcc
      661 cttgtcgaga cggcgggggt cgaagcggaa cagcggccag tggccggaat ccaccgcgag
      721 cttctgctgg tcggcgccgt gggccaggtc atagccgtgg gcgatgcagt ggctgtaggc
      781 caggatgagg ctgggtccgt tgtaggactc ggcttcctgg aaggccttga ccgtctgcgc
      841 gtcgcggaat ccgaaggcga ccttggcgac gtagatgccg ccgtaggtca tggcgatcat
      901 gccgagatcc ttcttgggca tgctcttgcc ggccatggcg aacttggcgc cggcgcccat
      961 gggcgtggac ttggaggcct ggccgccggt gttggagtac acctccgtgt cgagcacgag
     1021 cacgttcaca ttgcggccgg aggcgaggac gtggtccaga ccgccgtagc cgatgtcgta
     1081 ggcccagccg tcgccgccca cgacccagac gctcttgtcg accaggtagt cggccaggtc
     1141 gaggagcatc ttcgcctcgg gttccttcat ggcggagagt ttctgcttga gggcctcgac
     1201 ccgctcacgc tgggctttga tgccggcctc gttggtctgg tcggcagtgg cgaggccggc
     1261 gatgagctcg tcgccgagct tcgaacccag gcggtgcatc agctccaggg cgaactcctg
     1321 gtgcttgtcc accgagaggc gcagacccag gccgaactcc gcgttgtcct cgaagaggct
     1381 gttcgcccag gcgggaccgc ggccgtcctt gttgaccgtg tagggggtgg tgggcaggtt
     1441 gccgccgtag atgctggagc agcccgtggc gttggcgatg agcgtgcgat cgccgaagag
     1501 ctgggtgagc agcttgatgt agggcgtctc gccgcagcct gagcaggcgc cgctgtattc
     1561 gaagaggggc tcgaggaact gcgtgccctt cacgtccagc ttgactgtgg tccggtcgac
     1621 ctcaggcagg tcgaggaaga acttgtagtt ggccacttcg gcttcgcgaa ggggcgcctg
     1681 ggcgaccatg tcgatggcct tgtgcttggg attgctcttg tccttggcgg ggcagacctc
     1741 gacgcagagg gtgcagccgg tgcaatcctc gggcgccacc tggatggtgt acttctggcc
     1801 cttgtactcg gggcccttgt agtccacacc cttgaaggtc tcgggcgcgc cggccagggc
     1861 cgcgggatcg tagaccttgg cgcggatggc ggcgtggggg cagaccatcg cgcacttgtt
     1921 gcactggatg cagatggagc tgtcccactc ggggatttcc agcgcgatgt tgcgcttctc
     1981 ccacttggtg gtgcccacag gccaggtgcc gtccacgggg aaggcgctga cgggcaggag
     2041 gtcgcccttg ccttccatca tcacggcggt gacgcgctgg acgaagtccg gggcctcggc
     2101 ggccaccatg ggcggacgca cgcgggtgga actgacggcg gtggggacct tcacttcgtg
     2161 gaggtgggcc agcgtctcgt ccacggccag gtagttctgc tggacgacgg cgtcgccctt
     2221 cttgccgtag gtcttcttga tggccttctt gatctgggcg atggcctcct cgcggggcag
     2281 cacgcctgag atcgcgaaga agcaggtctg catgatggtg ttgatgcgca cgcccatgcc
     2341 ggtgttcttg gccacctcgt aggcgtcgat cacgtagaac ttgagctgct tctcgacgat
     2401 ggccgactgc acttccttgg gcagcgtgtc ccacacgttc tcggcgttgt ggggcgtgtt
     2461 caggaggaac gtggcgccct tggcggcggg ctcgagcatc tcgtacttct cgaggaagct
     2521 ggtctggtgg caggcgatga agttcgcctt ggtcaccagg taggcgctct tgatggggcg
     2581 ggggccgaag cggagatggc tgatggtgat ggcgccggac ttcttggagt cgtagacgaa
     2641 gtagccctgg ccgtagttcg gagtctcctc ggcgatgatc ttgatggagt tcttgttggc
     2701 gcccacggtg ccgtcggagc ccaggccgta gaacatggcc cgcttgacct cggcgccctc
     2761 gatgtcgaac tcgaggtcca tgtcgaggct gctgttggtg acgtcgtcga cgatgcccac
     2821 ggtgaagtgg ttcttgggct tgtccttggc caggttcgcg tag
//
LOCUS       DATGWW010000362         5958 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_73662, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000362 DATGWW010000000
VERSION     DATGWW010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5958
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73662"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..475)
                     /gene="ndk"
                     /locus_tag="VK150_05270"
     CDS             complement(56..475)
                     /gene="ndk"
                     /locus_tag="VK150_05270"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: protein motif:HMM:NF001908.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HLP30750.1"
                     /translation="MPLERTFAIVKPDAVKDGHVGEILTAIEQSGLKVVGLKLTRLTP
                     AICQGFYHEHVGKGFYPELEAFMTEGPVAIMVLEGENAILRWRDLMGATNPANAAEGT
                     LRKRFGASIGRNATHGSDKPESAQFEVSYFFNAFEQM"
     gene            615..3233
                     /gene="secA"
                     /locus_tag="VK150_05275"
                     /pseudo
     CDS             615..3233
                     /gene="secA"
                     /locus_tag="VK150_05275"
                     /inference="COORDINATES: protein motif:HMM:NF019156.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
     gene            3332..4198
                     /gene="rapZ"
                     /locus_tag="VK150_05280"
     CDS             3332..4198
                     /gene="rapZ"
                     /locus_tag="VK150_05280"
                     /inference="COORDINATES: protein motif:HMM:NF015620.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HLP30751.1"
                     /translation="MELIVVTGLSGAGRHSVLGALEDSGCTALDNVPPRLLEPLLELE
                     TKLQPTRERLVVGMDSRQADFTEEFAPLLDRLRARNVSVQVVFAEAGDDVLLRRYSET
                     RRPHHLALLGTAGEGIRRERELLAPIRALATTILDTSQLSLSELRLRIAALVPQVPSR
                     HTAVRLLSFGYKRGIPADADVILDARFLPNPYYVEALKPLTGRDWPVQEYLLESHEFM
                     EFLERAESWLRWSLPLVQQEGRAYHTLAIGCTGGQHRSVALVEILAHRLKRDVTYLTL
                     RHRELEGPASLP"
     gene            complement(4185..5306)
                     /locus_tag="VK150_05285"
     CDS             complement(4185..5306)
                     /locus_tag="VK150_05285"
                     /inference="COORDINATES: protein motif:HMM:NF027964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HLP30752.1"
                     /translation="MTHVVVLGAGRVGGAMARDLAADVQVTVADRSESALARMRDAGL
                     RTRAADLASPVGVKAAVEGADLVVGAVPGFMGFATAKAVLEAGKPLVDISFFNEDCFE
                     LDALAKRQSLTAIVDCGIAPGCHNIILGDVSRRWDRITSFECLVGGLPVVRTWPYEYK
                     AGFSPIDVIEEYTRPTRYVKDGKVVVYPALSEPELLDFPGLGTLESFNTDGLRSLIKT
                     FPQVPDMKEKTLRYPGHIEKMRMLRESGFFAKERIRVGDVDVSPLDLTTALLFPLWFM
                     EEDDEDFTVMRVTVEGEKDGQKLRQELNLLDRYDRATKTTSMARTTGYTCTAVVRLLL
                     RGGFTRKGVCPPEYLGMEPGAWDFIRDDLAKRGVIFTEG"
     gene            complement(5318..>5958)
                     /locus_tag="VK150_05290"
     CDS             complement(5318..>5958)
                     /locus_tag="VK150_05290"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HLP30753.1"
                     /translation="IPYSLLIGTTLVCGLYVLANGAYLKVLGPAGIANAPQDRVGSAA
                     LQALLGRGGGLIMAGSILVSMFGCLNGLVLSGARVYQLMAEDGLFYPKAALLNEHGVP
                     AFGLWIQALWTCLLTLTGTYGQLLDFIMLPTILFYVFTVGGIFLLRWRRPELERPVRV
                     WGYPLVPALYLVGACAIIGALFIHRPSYSWPGLILVALGLPVYLVVKPRVTA"
BASE COUNT         1073 a         1988 c         1991 g          906 t
ORIGIN      
        1 ccgggtcccg actccgcagg ctgccccgca gcctgctccg tcacccggcg gtcggttaca
       61 tctgctcgaa cgcgttgaag aagtagctga cttcgaactg ggcgctctcg ggcttgtcgc
      121 tgccgtgggt ggcgttgcgg ccgatgctgg cgccgaaccg cttgcgcagg gtgccttcgg
      181 cggcgttggc cgggttggtg gcgcccatga ggtcgcgcca gcgcaggatg gcgttctcgc
      241 cctccagcac catgatcgcc acggggccct cggtcatgaa ggcctccagc tcggggtaga
      301 agcctttgcc cacgtgctcg tggtagaagc cctggcagat ggcgggggtg aggcgggtca
      361 gcttcaggcc cacgaccttg agtccgctct gttcgatggc ggtgaggatc tcgcccacgt
      421 ggccgtcctt gacggcatca ggcttgacaa tggcaaaggt ccgttcgagg ggcatgtttt
      481 ctccagaatc caaacaatca gtgtgccctg tgcgggtaat tccggcaacc acgggtgctt
      541 gggtggggcc tccggcgctg ggaaaagagg cctctccagg ctacaatcaa tggtttacgc
      601 gactggaagg ctgcatgatc gacaacattc tgaagaaact catcggctcc aagaatgatc
      661 gcgagctgaa gcggctgtgg gccaaggttc agataatcaa tgccttggag cccgagatct
      721 cggccctgag cgacgaggct ctgaaggcca agacgcccta cttcaaggag aagctggccg
      781 ccggggccac cctggacgac atcctgcccg aggccttcgc ggtggcgcgg taagccagca
      841 agcgcgtgct gaagatgcgc catttcgacg tgcagctcgt gggcggcatg gtgctccacg
      901 aaggcaaggt ctccgagatg cgcaccggtg aaggcaagac cctcaccgcc acgctggccc
      961 tgtacctgaa cgccctggct ggcaagggcg cccacctcgt caccgtcaac gactacctgg
     1021 cccgccgcga cgcggagtgg atgggtcgcc tgtattcctg gctgggcctg agcatcggca
     1081 tcatccagca cggcctcgac gaccagcagc ggcgcgacgc ctatggctgc gacatcacgt
     1141 acgccaccaa caatgagctg ggcttcgact acctgcgcga caacatgaag tgggacctgg
     1201 aggacttcac ccagcgcggc ttccactacg cgatcgtgga cgaggtggac tcgatcctca
     1261 tcgacgaggc ccggaccccg ctgatcatcg ccggcagcag cgaggaggac acctccaagt
     1321 acttccgcat cgatgctgtc gtgccgaagc tgaagaagga cgtggactac aaggtggacg
     1381 agaaggatcg ccaggtgatg ctgacggacg acggcatcca ccacgccgag cagctgctgg
     1441 gcgtcacgaa cctctacgat cccaccagca tcgagaccct gcacggcctg aaccaggccc
     1501 tgctggcgca caacctctac cgcctcgacg tggactacat ggtccgcccc aaggaagacg
     1561 gcaagggcat ggaagtggtc atcgtggacg agttcacggg tcgcctgatg ccgggtcgcc
     1621 gctggtccaa cggcctccac caggccatcg aggccaagga gggcgttgaa gtcaacgccg
     1681 agaaccagac gctcgccacc gtgaccttcc agaacttctt ccgcatgtac ggcaagctcg
     1741 ccggcatgac gggcacggcc gagaccgaag ccacggaact gcactccatc tacaagctgg
     1801 acgtgatcat cgtccccacc aacatgccca tgatccgcaa ggacttcgcc gacaccgtct
     1861 actccacccg caccgggaag aagaaggcca tcgtcgagga gatcaaggac ctgcacacca
     1921 agggccagcc ggtcctggtg ggcacggcca gcatcgagag cagcgaggac ctggcggacg
     1981 cgctgaaggc cgcccgcatc ccccacgtgg tgctgaacgc caagcaccat gagcgggaag
     2041 ccgagatcgt ggcccaggcg ggccgcaagg gcgcggtgac catcgccacc aacatggctg
     2101 gccgcggcac ggacatcatc ctcggcggca accctgaagg cctggccagg ctcgaggcca
     2161 agaagaagga catcgccctc tacgacgagg atggcctcga gacccccgag ttctccgccc
     2221 tcgtggagga gatgcgggtg cagactgcgg cggagcacga ggaggtggtc tccctcgggg
     2281 gcctgcacat cctcggcact gagcgccacg agagccgccg catcgacaac cagctccgcg
     2341 gtcgcgccgg ccgccagggc gatcccggct ccagccgctt ctacctgtcc ctcgaggacg
     2401 acctgatgcg gatcttcggt ggcgatcgca tcaagaacct catgggtgcc atgggcatga
     2461 acgacgacga gcccatcgag gccggcatgg tcacccgtgc catcgagcgc agccagaagc
     2521 gcgtggagac ccacaatttc gagatccgca agcacctgct cgagtacgac gatgtgatga
     2581 acaagcagcg catcttcttc tacgggctgc gcacggagat cctcaagggc aacacccgcg
     2641 actacgtgct ccgcgtggct gcggaaatcg ccgagggcat cgcccacgac ttcctgcccg
     2701 acaagggcga gcgcgacctc cccggtttcc gggagcgcgt cgaacagctc ttcaccctcg
     2761 gaggcgagga ggtggacgcg gtgggccaga tgccccaggc ccaggcctcg gaggccctcg
     2821 gcgccctggt gcagcgcttc tatgaaggca aggacgagcg cctgggcggc gacggcatgc
     2881 gcagctacga gcgctggtcc atcctgcaga tcatcgacgc ggcctggaag cggcacctgc
     2941 tggtcatgga ccacctgaag gaggccatcg gcttccgcgg ttacggccag aaggatcccc
     3001 tcgtcgagta caagcgggag agctacgagt acttcgagca gatgcgcttc ggctacgagg
     3061 acgagatcat ctcctacctg ttccgggtgg agccccagcc cgccttcgtg ccggacgacg
     3121 acttcttccg tggtccctcc gagaccatcg agctgggccc cgacgaacag ggcaacgccc
     3181 ccgacggcat ccagcgggta ctgcgcttca ccgccggggg actggaagac tagccgcctg
     3241 accggatcag cgcttcaggc gggggccccg atcggggccc ccgctgtttt tcctgccggc
     3301 gaaccgcgga cagctgatag gttttaggtc catggaactc atcgtcgtca cgggactctc
     3361 cggcgccggg cgccactcgg tgctgggcgc gctggaggac agcggctgca cggccctcga
     3421 caacgttccg ccgcggctgc tggaacccct gctggagctg gagaccaagc tgcagcccac
     3481 ccgcgaacgc ctggtggtgg gcatggacag ccgccaggcc gacttcaccg aggagttcgc
     3541 cccgctgctg gaccgcctcc gggcgcgaaa cgtctccgtg caggtggtct tcgcggaggc
     3601 cggggatgac gtgctgctgc ggcgctactc cgaaacgcgc cgaccccatc acctggccct
     3661 gctgggcact gctggtgagg gcatccggcg ggagcgcgag ctcctggccc ccatccgcgc
     3721 cctggccacc acgatcctgg acaccagcca gcttagcctc tcggaactgc gcctgcggat
     3781 cgccgccctg gtgccccagg tgccctcccg ccacacggcg gtgcgcctcc tcagcttcgg
     3841 ctacaagcgg ggcattccgg ccgacgcgga cgtgatcctc gatgcccggt tcctgccgaa
     3901 cccctactat gtggaagccc tgaagcccct cacgggccgc gactggcccg tgcaggaata
     3961 cctgctcgaa tcccatgagt tcatggaatt cctggagcgg gccgaatcct ggctgcggtg
     4021 gtcgctgccc ctcgtgcagc aggagggccg ggcctatcac acgctggcca ttggctgcac
     4081 cggcggccag caccgttccg tggccctggt cgagatcctg gcgcaccggc tgaagcgcga
     4141 tgtgacgtac ctgaccctcc gtcaccgcga gctggagggc ccggctagcc ttccgtgaag
     4201 atcaccccgc gcttggccag gtcgtcgcgg atgaaatccc aggccccggg ttccatgccc
     4261 aggtattccg gcgggcagac gcccttgcgg gtgaaaccgc cccgcagcag cagccgcacg
     4321 actgcggtgc aggtgtagcc ggtggtgcgc gccatggagg tggtcttcgt ggcgcggtcg
     4381 tagcggtcga gcaggttcag ctcctggcgc agcttctggc cgtccttctc gccctccacg
     4441 gtgacccgca tgaccgtgaa gtcctcgtca tcctcctcca tgaaccagag cggaaagagc
     4501 agggcggtgg tcaggtcgag ggggctcacg tccacgtcgc cgacgcggat ccgctccttg
     4561 gcgaagaacc cggattcccg gagcatccgc atcttctcga tgtggccggg gtaccgcagg
     4621 gtcttctcct tcatgtccgg cacctggggg aaggtcttga tgaggctccg caggccgtcg
     4681 gtgttgaagg attcgagggt gcccagcccg gggaagtcga ggagctccgg ctccgagagc
     4741 gcgggataga ccacgacctt gccatccttc acgtaccgcg tggggcgggt gtattcctcg
     4801 atgacgtcga tggggctgaa gccggccttg tattcgtagg gccaggtgcg caccacggga
     4861 aggccaccca cgaggcactc gaaggaggtg atgcggtccc agcgcctcga gacgtcgccc
     4921 aggatgatgt tatggcagcc cggcgcgatc ccgcagtcca cgatggccgt gaggctctgg
     4981 cgcttggcga gggcgtcgag ctcgaagcag tcctcgttga agaacgagat gtccaccagc
     5041 ggcttgccgg cttccagcac ggccttggcg gtggcgaagc ccatgaagcc gggcacggcg
     5101 cccacgacga ggtcggcccc ctccacggcg gccttcacgc cgaccggcga ggccaggtcc
     5161 gccgcgcggg ttcggagtcc cgcgtcgcgc atccgggcca gggcggactc ggagcggtcc
     5221 gccacggtga cctgcacatc cgcggccagg tccctggcca tggcgccgcc gacgcggcca
     5281 gctccgagaa cgacgacgtg ggtcatggat ggctccttca ggcggtgacg cggggcttca
     5341 ccacaaggta gacgggaaga ccgagcgcca ccaggatgag gcccggccag gaatagctgg
     5401 gacggtggat gaagagggcg ccgatgatgg cgcaggcccc caccaggtag agggccggca
     5461 ccagcgggta gccccagacc cgcaccggac gttccagctc ggggcggcgc cagcgcagga
     5521 ggaagatccc acccacggtg aacacgtaga agaggatcgt gggcagcatg atgaaatcca
     5581 gcagctgccc gtaggtgccc gtgagggtga gcaggcaggt ccagagggcc tggatccaca
     5641 gcccgaaggc cggcacgcca tgctcattga gcagtgcggc cttggggtag aagaggccat
     5701 cctcggccat gagctggtag acccgcgcgc cagagagcac caggccgttc aggcagccga
     5761 acatggacac caggatgctg ccggccatga tcaggccccc gccccggccc aggagggcct
     5821 gcagggcggc gctgcccacc cggtcctggg gggcgttggc gatgcccgcg ggccccagca
     5881 ccttcaggta ggcgccattg gccagcacgt agagcccgca gaccagggtg gtgccgatga
     5941 ggagggaata ggggatgg
//
LOCUS       DATGWW010000363         2649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_300854, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000363 DATGWW010000000
VERSION     DATGWW010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2649
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300854"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..714)
                     /locus_tag="VK150_05295"
     CDS             complement(<1..714)
                     /locus_tag="VK150_05295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30754.1"
                     /translation="MTPEVFAEWLRRQGFRVVRTKSSYWFNRGPRVFQAFPYHWVIEP
                     GEEELRGLLLDEGAVGLRYSTPLGAAEGACSYHMVYERPNYGLKDVDSSVRSKVRRGL
                     EACWVGPIPLERYAEEGWAIEQDTLARQQRHSRLDRERWDSMIQAAEGLEGFEAWGAE
                     VEGRLGATLLFVRQGDRIDMLYQQSLHACLPFRVNNALLFEATRSLVSRPGVRGIHNG
                     LHSLDAPSSVDLFKARLGYT"
     gene            complement(785..1720)
                     /locus_tag="VK150_05300"
     CDS             complement(785..1720)
                     /locus_tag="VK150_05300"
                     /inference="COORDINATES: protein motif:HMM:NF013761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HLP30755.1"
                     /translation="MIRKAANLLARQAWFRKFLLGTPVLRDLAGRFVGGDDLASGARA
                     ARSLNARGIQASLNFHGMHVLEEGEAVAAADEALQALRLIHAENLDSHVSVKLTKIGL
                     DVDPALCRAQLVRILDGAAEAGVFVRVDMEEAVYADATLQLFEDMQDRYGPERVGLVI
                     QSYLRHRAGDLDRLMARSARIRLVKGGYRESAQQVFRAKAEVDAAFLRDIERLMTRGT
                     SPAIATHDAEAIAWTLALRQRLGLSKQDFEFQMLYGVKPDLQDRLVAEGYRVRCYIPY
                     GGDWATHLVGCLRRIPAGALAHVAQWAPGRGRTAS"
     gene            complement(1742..>2649)
                     /locus_tag="VK150_05305"
     CDS             complement(1742..>2649)
                     /locus_tag="VK150_05305"
                     /inference="COORDINATES: protein motif:HMM:NF028171.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carbamoyltransferase C-terminal
                     domain-containing protein"
                     /protein_id="HLP30756.1"
                     /translation="DHICAGLQNFTEEFITEWIRGWLKKTGRRKIRLSGGVFMNVKLN
                     KTIGELPEVDDLYVFPSCGDETNALGAAWSYMADHGLAEQIQPLESLYLGPEHSAEAY
                     AKAAEQARVLGWTVEAPGDIESAVADLLSQGEVVARVHGREEFGARALGNRSILADPT
                     RLNVVRVVNNAIKCRDFWMPFAPSVMSECADRYIHNPKGFVAPYMILAFDSRNTPEVK
                     AACHPEDGTIRPQVVTKAQNAPYHRILEQFHERTGRGALLNTSFNIHGEPIVSSPADA
                     IDVMQRSGLLHLALGPYLISKPASH"
BASE COUNT          408 a          881 c          919 g          441 t
ORIGIN      
        1 ggtgtagccg agccgagcct tgaagaggtc caccgaactc ggcgcgtcca gcgagtggag
       61 gccgttgtgg atgcctcgca cgccgggtct cgacaccagg cttctcgtgg cttcgaagag
      121 cagtgcgttg ttcacccgga agggcaggca cgcatggagg gactgctgat agagcatgtc
      181 gatgcggtcg ccctgccgca cgaacaggag cgtcgcgccc aggcgtccct cgacctcggc
      241 tccccaggcc tcgaagccct cgaggccttc cgcggcctgg atcatgctgt cccaccgctc
      301 ccggtcgagc cgtgaatggc gctgctgacg cgccagggtg tcctgctcga tggcccagcc
      361 ctcctcggcg tagcgttcca gtgggatcgg gcccacccag caggcctcga ggccccggcg
      421 gaccttcgat cgaactgagg aatccacgtc cttgaggccg tagttgggcc gctcgtagac
      481 catgtggtag ctgcaggccc cttccgcggc ccccaggggt gtcgagtaac ggagtcccac
      541 cgcgccttcg tcgagaagga ggcctcgcag ctcttcttcc cctggctcga tcacccagtg
      601 gtacggaaag gcctggaaca cccgcgggcc ccgattgaac cagtagctgc tcttcgtccg
      661 gaccacccgg aagccctggc gccgaagcca ttcggcgaag acctccgggg tcatgcggcc
      721 ctccctccgg gccgcggctc cccatcgaag gccggaaccc gtcgctgccc ctggcgaatc
      781 cgcctcatga ggccgtcctt ccccgcccgg gcgcccactg agctacgtgc gcgagcgccc
      841 cggctggaat ccgccgcagg catcccacga ggtgggtggc ccagtcgccg ccatagggga
      901 tgtagcagcg gacccggtag ccctcggcga ccaggcggtc ctggaggtcg ggcttcacgc
      961 cgtagagcat ctggaactcg aaatcctgct tgctgaggcc cagtcgctgc cggagggcga
     1021 gggtccaggc gatggcctcg gcgtcatgcg tggcgatggc cggcgaggtt ccccgggtca
     1081 tgagccgctc gatgtcgcgc aggaaggcgg cgtcgacttc ggccttggcc cggaagacct
     1141 gctgggccga ttcccggtag ccgcccttca ccagccggat gcgtgcgcta cgggccatca
     1201 ggcggtccag gtcgcctgcc cggtggcgga ggtaggactg gatgacgagc cccacccgct
     1261 cgggaccgta gcgatcctgc atgtcttcga acagctggag ggtcgcgtcg gcgtagacgg
     1321 cctcctccat gtctacccgg acgaagacac cggcctcggc cgcgccatcc aggatgcgga
     1381 ccagctgcgc gcggcagagg gcgggatcga cgtcgaggcc gatcttcgtg agcttcaccg
     1441 aaacgtgcga atcgagattc tcggcgtgga tcagccgcag cgcctggagg gcctcgtccg
     1501 ccgcggcaac ggcttcgccc tcctccagca cgtgcatgcc gtggaagtta agggaggcct
     1561 ggataccccg cgcgttcagg ctccgcgcgg cccgggcgcc cgaagccagg tcgtctccgc
     1621 cgacaaagcg gcccgccagg tcccgcagta ccggcgtgcc caggaggaat ttcctgaacc
     1681 acgcctgccg ggcgaggagg ttggctgctt tccggatcat ggtgcctcgt ggaggcaggc
     1741 ctcagtgcga agccggcttg gagatcaggt aggggccgag ggccaggtga agcaggcccg
     1801 accgctgcat cacgtcgatc gcgtccgccg gagaggagac gatgggctcc ccgtggatgt
     1861 tgaaggaggt gttgaggagc gcgccgcgcc ccgtgcgctc gtggaactgc tccaggatgc
     1921 ggtggtaggg ggcgttctgg gccttggtca ccacctgggg ccggatggtc ccgtcttcgg
     1981 ggtggcaggc cgccttgacc tctggggtgt tgcgggagtc gaaggccagg atcatgtacg
     2041 gcgccacgaa gcccttcggg ttgtggatgt agcgatccgc gcattcggac atcacggagg
     2101 gtgcgaaggg catccagaag tcccggcact tgatcgcgtt gttcaccacg cgcacaacgt
     2161 tcaggcgcgt ggggtccgcc aggatggagc ggttccccag ggcgcgagcg ccaaattcct
     2221 cgcggccgtg gacccgggcc accacctcgc cctggctcag gaggtcggcg actgcggact
     2281 cgatgtcacc aggagcctcc accgtccagc ccagcacccg ggcctgctcg gcggccttgg
     2341 cataggcctc tgcgctgtgt tccgggccga ggtagagcga ctcgagtggt tgaatctgct
     2401 cggcgagccc atggtccgcc atgtaggacc aggcggcgcc aagggcgttg gtctcgtcgc
     2461 cgcaggatgg gaacacgtac aggtcgtcca cttcgggcag ctcgccgatg gtcttgttga
     2521 gcttcacgtt catgaagaca ccgccggaga ggcggatctt ccttcgaccg gtctttttga
     2581 gccagccccg gatccactcg gtgatgaatt cctcggtgaa gttctggagg cccgcgcaga
     2641 tgtggtcga
//
LOCUS       DATGWW010000364         1892 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_149745, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000364 DATGWW010000000
VERSION     DATGWW010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149745"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1667)
                     /locus_tag="VK150_05310"
     CDS             complement(<1..1667)
                     /locus_tag="VK150_05310"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30757.1"
                     /translation="MFRVRVLAPLALLLAAGPLFATAPKAKEEPAAAKESPLAGLPLR
                     NLGPAVTSGRVGDIAVDPNKADTWYVGAASGGVWKTVNGGTTWTPLFDKESSFSIGCV
                     TVDPRDSNTVWVGSGENNSQRSVAYGDGVYRSLDGGKHWENLGLKASEHIAKILVDPR
                     DSKVVFVAAQGPLWKEGGDRGLYKTVDGGKTWKAVLTVDVHTGVTDVVLDPRRPDVMY
                     AATYQRRRHVWGMVNGGPGSGVHKSTDGGQTWTRLTEGLPKEDMGRIGLAVPNGEPDT
                     VYATIEAANKAGGFFRSLDGGRTWERRNEQVSGSAQYYQELFCDPRDPQRVYSMDTWM
                     QVTDDGGKTWRRVGEKSKHVDNHALWIDPANSDHLISGCDGGVYESRDRGATWEFKAN
                     LPIIQYYRVAVDNARPFYTVYGGTQDNFSMGGPSRTRNLHGATNADWFVTQGGDGFYS
                     QVDPDDPNTVYSESQHGGLARFDRRTGERVELQPLPAPGEEPYRWNWDAPMMLSPHNG
                     KRLYFAAQKLLRSDDRGDSWTAVSPDLTRRIDRSRLKIMDKVWSVDAV"
BASE COUNT          261 a          660 c          630 g          341 t
ORIGIN      
        1 acagcgtcca cgctccagac cttgtccatg atcttcaggc ggctgcggtc gatccttcgg
       61 gtgaggtcgg ggctcacggc ggtccagctg tcgccgcggt catcgctgcg caggagcttc
      121 tgcgcggcga agtagagacg cttgccgttg tgggggctga gcatcatcgg cgcgtcccag
      181 ttccagcggt acggttcctc gccgggggcc ggcaggggct ggagctccac gcgctcgccc
      241 gtgcggcggt cgaagcgggc caggccgccg tgctgactct cggagtagac cgtgttcgga
      301 tcgtcgggat ccacctggct gtagaagccg tcgccgccct gggtcacgaa ccagtcggcg
      361 ttcgtggcgc catgcaggtt gcgggtgcgg ctggggccgc ccatggagaa gttgtcctgg
      421 gtgccgccgt acaccgtgta gaagggccgg gcgttgtcca ccgccacgcg gtagtactgg
      481 ataatcggca ggttggcctt gaattcccag gtggcgccgc ggtcgcggct ttcatagacg
      541 ccgccgtcac agccggagat caggtggtcg gagttggccg gatcgatcca cagcgcgtgg
      601 ttgtccacgt gcttggactt ctcgcccacg cgccgccagg tcttgcctcc gtcatcggtc
      661 acctgcatcc aggtatccat ggagtacacg cgctggggat ccctcggatc gcagaagagc
      721 tcctggtagt actgcgcgct gcccgacacc tgctcgttcc gccgctccca ggtgcggccg
      781 ccatccaggc tgcggaagaa gccgccggcc ttgttcgcgg cctcgatggt ggcatagacc
      841 gtatccggct cgccgttggg cacagccagg ccgatgcggc ccatgtcttc cttcggcagc
      901 ccctccgtca ggcgggtcca agtctggccg ccgtccgtgc tcttgtggac accactgccg
      961 ggaccgccgt tcaccatgcc ccacacgtgg cggcgccgct ggtaggtggc cgcgtacatc
     1021 acgtcgggtc gtctggggtc cagcaccacg tcggtgacgc ccgtgtggac gtccaccgtg
     1081 agcacggcct tccacgtctt tccgccatcc actgtcttgt agaggccccg gtcgccgcct
     1141 tctttccaga gcggcccctg cgcggccacg aacaccacct tgctgtcgcg aggatccacg
     1201 aggatcttcg cgatgtgctc gctggccttc aggcccaggt tctcccagtg cttgccgccg
     1261 tccaggctgc ggtacacgcc gtcgccgtag gccaccgagc gctgggaatt gttctcgccg
     1321 gatcccaccc acaccgtgtt ggaatcccgg gggtccaccg tcacgcagcc gatggagaag
     1381 gaggattcct tgtcgaagag gggggtccag gtggtgccgc cgttcacggt cttccagacg
     1441 ccgcccgagg ccgcacccac gtaccaggtg tcagccttgt tggggtcgac cgcgatgtcg
     1501 cccacccggc ccgaggtcac cgccggcccg aggttccgca ggggcagccc ggccagaggg
     1561 gattccttgg cggcggccgg ttcctccttg gccttcggcg cggtggcaaa gagaggacct
     1621 gccgccagga gcagggccag tggggcgagg acgcggacac gaaacatggt gcctcctatt
     1681 acgagggttt atcccatcat gcccgaatcc tgggcgatgt caccaaccgc tgccggcacc
     1741 ctttccccgg acccgaccct gccacttcac ggtctgggga cccggctcca ggtcgagggc
     1801 ctcgccctga ccttcgccca ggcggccccg cagggtcacg gcccccttgg cctgcaccag
     1861 cttcacggag cggtcggccc ccagtgtcac cg
//
LOCUS       DATGWW010000365         2058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_252897, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000365 DATGWW010000000
VERSION     DATGWW010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2058
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252897"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1163
                     /locus_tag="VK150_05315"
     CDS             <1..1163
                     /locus_tag="VK150_05315"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HLP30758.1"
                     /translation="VRWEFFRPPEGEAAVLRTPDGRELARFVFSLEALRKPAQGPPRL
                     ARKAGAPPAALPSPKPLPEPTIRTEARLNTLPVRPIPGRNARDLPEVSHASSGAPSGI
                     PRRASTSLPALPEAAAPSRHAAPIAAGAAPALAWPGMGEALNLTRGPGGHKRILLSFD
                     GGSSAEVATEVLDLLKARGVRTTLFLTGVFIQRYPALVKRMAAEGHELGNHTMNHPHF
                     APGMQRDAKWNRERVQRELLEADAALVQLLGRPMDPFWRAPYGEHTAEIRRWAEELGY
                     RHVGWSEGADTLDWATPKDRRLYRSGEAIVKRLEQRLGKNGDGLIVLMHLGSGRHEGD
                     RPTDGLGAFMDRARKEGWTFVSAGAFLRDLGKPAWDPQQRLALLAGAPGQAR"
     gene            1243..>2058
                     /locus_tag="VK150_05320"
     CDS             1243..>2058
                     /locus_tag="VK150_05320"
                     /inference="COORDINATES: protein motif:HMM:NF024882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HLP30759.1"
                     /translation="MLGFIALVLMLSLASYHPLDPHPFTQGAAITAVQNLCGTVGATL
                     AGLLQTLIGIGAWIVPPYLLWEAWPREGRHWPGRLAWLGFALSIWTALGAFGTRIWTG
                     LPEAGPLQLRWGGWLGSALWPVGRRILGPVGLPLLLALIVLICALVLAPALTRAVGRL
                     LTRWFGEKAWPWMKPMPARGFQGFLTMVKRPFLRGRNPHQPDLDASDAVALQALALRQ
                     QALEDQREALLKAELETAEARRKRPAIRTEDLLPPIHSMNLDAASAILDAQPLP"
BASE COUNT          265 a          818 c          690 g          285 t
ORIGIN      
        1 ccgtgcgctg ggagttcttc cgcccgcccg agggcgaggc cgctgtgctg cgcacccctg
       61 acggccggga gctggcccgc ttcgtgttct cgttggaagc gctgcggaaa cccgcccaag
      121 gcccgccccg cctggcccga aaggccgggg ccccgcccgc ggctcttccg agccccaagc
      181 ccctgccgga gcccacgatt cggacggagg cccgcctgaa cacgctgccc gtccgcccca
      241 tccccggccg gaatgcccgt gacctgccgg aggtctcgca tgcatccagt ggcgcgccaa
      301 gcgggatccc gcgccgcgcc tcaacctcgc tgcccgccct gcccgaggcc gcggccccgt
      361 cccgccacgc ggcccccatc gccgccggag ccgcgccggc cctggcctgg cctggcatgg
      421 gcgaagccct caacctcacc cgcggccccg gcgggcacaa gcggatcctc ctcagcttcg
      481 acggcggctc cagcgccgag gtggccacgg aggtgctcga cctgctcaag gcccggggcg
      541 tgcgcaccac gctgttcctc accggagtct tcatccagcg ctatcccgcc ctggtgaagc
      601 gcatggccgc cgagggccac gagctgggca accacaccat gaaccacccg catttcgcgc
      661 cgggcatgca gcgggacgcc aaatggaacc gggaacgggt gcagcgcgag ctgctggagg
      721 ccgacgccgc cctggtgcag cttctggggc ggcccatgga tcccttctgg cgggcgccct
      781 acggtgagca caccgccgag atccgccgct gggcggaaga gctgggctac cgccatgtgg
      841 gctggagcga gggcgccgac accttggact gggccacgcc caaggaccgc cgcctgtacc
      901 gcagcggcga ggccatcgtg aagcgcctgg agcagcgcct ggggaagaac ggtgacggcc
      961 tgatcgtgct catgcacctg ggctcgggcc gccacgaggg cgatcggccc accgatgggc
     1021 tcggcgcctt catggaccgc gcccggaagg agggctggac ctttgtgtcc gccggcgcct
     1081 tcctgcgcga cctcggcaag cccgcctggg atccgcagca acggctcgcc ctcctggccg
     1141 gagcccctgg ccaggcccgc tgaaggccgc agccgggcta cactggtggg caaccaccgg
     1201 ggaggcgcat tgcaggggat cggccgctgg atgttgaggg ctgtgctggg tttcatcgcc
     1261 ctggtgctga tgctctccct cgccagttac cacccgctgg atccccaccc cttcacccag
     1321 ggcgcggcca tcaccgccgt gcagaacctc tgcggcaccg tgggcgccac cctggcgggc
     1381 ctgctgcaga ccctgatcgg catcggcgcc tggatcgtgc ctccttacct gctgtgggaa
     1441 gcctggcccc gcgagggccg ccactggccc gggcgcctgg cctggctcgg cttcgccctg
     1501 tcgatctgga cggccctcgg cgccttcggc acccgcatct ggacgggtct gcccgaggcc
     1561 ggccccctcc agctgcgctg gggcggctgg ttgggcagcg cgctgtggcc cgtgggccgc
     1621 cgcatcctcg gccccgtggg cctcccgctg ctgctcgccc tcatcgtcct catctgcgcc
     1681 ctggtgttgg cacctgccct gacgcgggcc gtgggccgcc tgctcacccg gtggttcggc
     1741 gagaaggcat ggccctggat gaagcccatg cccgcccggg gcttccaggg gttcctcacc
     1801 atggtgaagc ggccctttct gcgcgggcgc aacccccacc agccggatct cgacgccagc
     1861 gacgcggtcg ccctccaagc cctcgccctg cgccagcagg ccctggagga ccagcgggaa
     1921 gccctgctga aggccgaact ggagaccgcc gaggcccgcc ggaagcgacc cgccatccgc
     1981 accgaggacc tgctcccgcc catccattcc atgaacctcg acgcggcctc cgccatcctc
     2041 gacgcccagc ccctgccg
//
LOCUS       DATGWW010000366         1656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_300976, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000366 DATGWW010000000
VERSION     DATGWW010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300976"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..845)
                     /locus_tag="VK150_05325"
     CDS             complement(21..845)
                     /locus_tag="VK150_05325"
                     /inference="COORDINATES: protein motif:HMM:NF014623.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RMD1 family protein"
                     /protein_id="HLP30760.1"
                     /translation="MAPETRLSLSIRAYQIAEEIDIKRCRAEFPGDLAATSPGELFYR
                     RQSASPLGPQDQAVEGYLYVMDYGVVIFAGYGEAEASAIIDRLHPFCQGPLATRMGED
                     FHVRGGSQDLVLEYNAIHLPAIGPDVLRIVMLYVGQSAALDYYEESMNRMMDETAVFA
                     KDLERYGRLKTSRKNVQRFIGRILAVRNRIVDNLYIMDAPDITWESEYLDRVDRGMKK
                     TFDVAERFRSLDYQLREIKENLELYAELLQFRQSNMLEWIIIGLILVEVVQIFKWW"
     gene            922..>1656
                     /locus_tag="VK150_05330"
     CDS             922..>1656
                     /locus_tag="VK150_05330"
                     /inference="COORDINATES: protein motif:HMM:NF035938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EboA domain-containing protein"
                     /protein_id="HLP30761.1"
                     /translation="MITTRTLLSLWLEPRIPAAASAWLQEKAALFAAEAQERIVFPAF
                     SATVRHVGKAPLELSAAALSDAATLVEGWNPRDWTLDQTARILLLLSLPPGDRGARLM
                     DEMYQTADVGEALALMKALPLLPNPPLHMARAREAIRSNVKAQFEAVALRNPYAAKHV
                     DDIGWNQLVTKTLFVDSPLDQVWGLDRRVNPALGRILTDLAFERWAAGRTFPPLLWRC
                     VGPVAEGRAFEALERALRGPDAAHGRA"
BASE COUNT          259 a          577 c          522 g          298 t
ORIGIN      
        1 ggaggtcttc cgcccccgcc tcaccaccac ttgaagatct gcacgacctc gacgaggatg
       61 agaccgatga tgatccattc cagcatgttg ctctgccgga attgcagcag ctccgcgtag
      121 agctcgaggt tctccttgat ctcccggagc tggtagtcga gcgagcggaa gcgctccgcc
      181 acgtcgaagg tcttcttcat gccgcggtcc acccggtcca ggtactcgct ctcccaggtg
      241 atgtccggcg cgtccatgat gtagaggttg tcgacaatgc ggttgcgcac cgcgaggatg
      301 cggccgatga agcgctgcac gtttttgcgc gaggtcttga gacgcccgta gcgctccagg
      361 tccttggcga acaccgcagt ctcgtccatc atgcggttca tggactcctc gtagtagtcg
      421 agggcggcgc tctggcccac gtagagcatc acgatgcgca gcacgtccgg gccgatggcg
      481 ggcaggtgga tggcgttgta ttcaagcacg aggtcctggg agcccccgcg cacgtggaag
      541 tcctcgccca tgcgcgtggc caggggcccc tggcagaagg gatgcaggcg atcgatgatg
      601 gcggaagcct ccgcctcgcc gtagccggcg aagatgacca cgccgtagtc catcacgtag
      661 agatagccct cgacggcctg gtcctgcgga cccaaggggc tggccgactg gcggcggtag
      721 aagagttcgc cgggggaggt ggccgcgagg tcgccgggaa actcggcgcg gcagcgtttg
      781 atatctatct cctcggcgat ctggtaggcg cggatgctga gggagagacg ggtctcgggg
      841 gccatgagaa ctattatcgt tatctctgcc aatctggcgg aagtattttt tcctgtccct
      901 gattcggtgt atcttaaggc catgattaca acccggacgc ttctgtccct ctggctggag
      961 ccccgcatcc ccgccgccgc atccgcctgg cttcaggaga aggcggccct cttcgccgcc
     1021 gaagcccagg agcgcatcgt ttttcccgcc ttcagcgcca ccgtccgcca cgtgggcaag
     1081 gctcccctcg aactctccgc cgccgccctc tccgatgccg ccaccctggt ggaaggttgg
     1141 aatccgcggg actggacctt ggaccagacc gcccgcatcc tcctcctcct ctccctgccg
     1201 cccggcgacc gcggcgcccg cctcatggac gagatgtatc agacggccga cgtgggcgag
     1261 gccctggccc tcatgaaggc cctgcccctg ctgccgaatc cgcctctaca catggcccgg
     1321 gcccgcgagg ccatccgcag caatgtgaag gcccagttcg aagccgtcgc cctgcgcaat
     1381 ccctacgccg cgaagcacgt ggacgacatc ggctggaacc agctcgtcac caagaccctg
     1441 ttcgtggatt cccccctgga ccaggtctgg ggtctcgacc gccgggtcaa tcccgccttg
     1501 ggccgcattc tcaccgacct cgccttcgag cgctgggccg ccggccgcac cttccctccc
     1561 ctcctgtggc gctgcgtggg cccggtggcg gaaggccgag ccttcgaggc cctggagcgc
     1621 gccctgcgcg gacccgacgc cgcccacggg cgcgcc
//
LOCUS       DATGWW010000367         1533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_300985, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000367 DATGWW010000000
VERSION     DATGWW010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300985"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1453)
                     /locus_tag="VK150_05335"
     CDS             complement(<1..1453)
                     /locus_tag="VK150_05335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30762.1"
                     /translation="MRPDLADDLTLFGTGVSLGPFLVALLSGLLLAYCFQWLLTNLSV
                     AIGASALQGITDPGKRAAARRKAEDKERERLREGKPKEFEKDEGGWDDTAIKVESGLG
                     AWAMITSSIALFLACWLAVELIRLQGNFEAVILGLVIWSAFLGSMMYIESAAASSLLG
                     LVTRAVKGGVNTALSPLKAAAKGIGEGQERKETVKTAEEVAAVVRRELFPETRAEGES
                     ADLGPGLKEKIRDFVSQNVKPKVMDIADVGRQAKSLLTDPELVEMAKRGELQTLDRQR
                     FAEMVAGRTDLSKEQIEKLTDSLHGAWDRFLGESGAPALEPATADYTPGTALATAGSG
                     PSSSSAQGGILAKYKGFKEFLRNTGREELSPERLEQEVKTLVIDPRLGISQLREHLKQ
                     LDRESLVQALGQRKDMTPEEAGRIADQIELARGRALSAKEQSEHRAQEARDRALSKVR
                     DYVYSLNRPELDYEGFEGDFKKLFDDPKAGYEDL"
BASE COUNT          231 a          494 c          508 g          300 t
ORIGIN      
        1 tgaggtcttc atagccggcc ttcgggtcgt cgaagagctt cttgaagtct ccttcgaagc
       61 cttcgtagtc cagctcgggc cggttcaggg agtacacata atcgcgtacc ttggagagcg
      121 cgcggtcgcg ggcctcctgg gccctatgct cggactgctc cttggcggag agggcgcggc
      181 cgcgggccag ctcgatctgg tcggcgatgc ggccggcctc ctcgggggtc atgtccttgc
      241 gctggccgag ggcttgtacc aggctctcgc ggtcaagctg cttgaggtgc tcccggagct
      301 gggatatgcc cagcctggga tcgatcacca gggtcttcac ctcctgctcc agtcgctcgg
      361 gactcagctc ctcgcggccg gtattgcgga ggaactcctt gaagcccttg tacttcgcca
      421 ggatgcctcc ctgggcggag gacgacgagg ggccgctgcc ggcggtcgcc agggccgtgc
      481 ccggggtgta gtcggcggtc gcgggttcca gagccggggc cccgctctcg cccaggaatc
      541 tgtcccaggc gccgtgcagg gagtcggtaa gtttttcgat ctgctccttg ctcaggtcgg
      601 tgcgtcccgc gaccatctcg gcgaagcgct ggcgatcgag ggtctggagt tcgccgcgct
      661 tggccatctc cacgagctca ggatcggtca gcagggactt ggcctggcgc cccacgtcgg
      721 cgatgtccat caccttgggc ttcacgttct ggctcacgaa gtcgcgaatc ttctccttga
      781 gcccggggcc caggtcggcg ctttcgcctt cggcgcgcgt ctccgggaag agctcgcggc
      841 gtacgacggc ggccacctcc tcggcggtct tcaccgtctc tttccgctcc tgtccctccc
      901 cgatgccttt ggcggcggcc ttgagtgggc tcaaggcggt gttcacgcct cccttcaccg
      961 cgcgggtcac caggcccagc agggaggagg ccgcggcgct ctcgatatac atcatggagc
     1021 ccaggaaggc ggaccagatg acgaggccga ggatgacggc ttcgaagttg ccctgcaggc
     1081 ggataagctc caccgcgagc cagcaggcca ggaagagggc gatgctggac gtgatcatgg
     1141 cccaggcccc gaggcccgat tccaccttga tggcggtatc atcccaaccg ccttcgtcct
     1201 tttcgaattc tttcggcttg ccctcccgga ggcgctccct ttccttatcc tccgccttcc
     1261 gacgggcggc cgcgcgtttc ccgggatcgg tgattccttg gagggcgctc gctccgatgg
     1321 cgacggagag gttggtcagc aaccactgga agcagtaggc caggagcaga ccggagagga
     1381 gggccacgag gaacgggccc agcgaaactc ccgtgccgaa tagggtcagg tcgtcggcaa
     1441 gatcgggtct catgtttcct ccaagggttt acgctcggac gaggtcctga atagaccggg
     1501 tcctacccta taaacaaaat gatggaaacg act
//
LOCUS       DATGWW010000368         1662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_301195, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000368 DATGWW010000000
VERSION     DATGWW010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_301195"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1575
                     /locus_tag="VK150_05340"
     CDS             <1..1575
                     /locus_tag="VK150_05340"
                     /inference="COORDINATES: protein motif:HMM:NF019239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1570 domain-containing protein"
                     /protein_id="HLP30763.1"
                     /translation="VLPGINVDLHKPVVVIVAENEASMRRFVPDQFAGKDPKRPSGLY
                     LRGPERDLAIVRLDVGHQEDQPFAVVFHEYTHAIVHNHFSGLPTWLDEGIAEFYGSTE
                     IRSKRVYLGRIPFHHLDILRRGRMPLQALLQVNHDSPEYMEGSKANQFYAQSWAMVHY
                     LFMDEEARKGGTLAAYLRALSRQPDPLAAAQEGFGDLAKFEGRIAQYASRPSLTFFDM
                     ALQVTRSDKDFRVRPVSEAEALVIRAEVLAQSRKEEEAGLLLDQARALDPRSPQLHAA
                     LGLTALRKGDWPGAEQALRSAQAMGTTDFRVPLHLAELALQGVMDPPASSEVMLGWLE
                     EARRLEPDYPGIHLALSRLHARDPREAEKAIQAGRAAIKLAPSDITMRMNFGSVLMTL
                     GREAEAKDIGDQVARMAHEGWERQASASYQAQLARFLEYRAATAKAAEVPPPTPSETS
                     PPTPRTKPGVKPLRFWLPDSLADLHKEVQAAVMQGRLDDAIQMVRAAIPKAKGPYEKP
                     SLKALLDHLKGRKAGY"
BASE COUNT          286 a          559 c          566 g          251 t
ORIGIN      
        1 gtcctgcccg ggatcaatgt ggacctccac aagcccgtcg tcgtcatcgt ggctgagaac
       61 gaggcctcca tgcgccgatt cgtaccggac cagttcgcgg ggaaggatcc caagcggcct
      121 tcgggcttgt acctgcgcgg cccggagcgg gatctggcca tcgtgcggct ggatgtgggc
      181 caccaggagg atcagccctt cgccgtggtg ttccacgagt acacccacgc catcgtacac
      241 aaccatttct cggggctccc cacctggctg gacgagggca tcgcggagtt ctatggctcg
      301 accgagatcc gttcgaaacg ggtctacctc gggcgcatcc ccttccacca tctggacatt
      361 ctccggcgtg gccgcatgcc gctgcaggcc cttctgcagg tcaaccatga ctcgccggaa
      421 tacatggagg gaagcaaggc gaaccagttc tacgcccaga gctgggccat ggtgcattac
      481 ctcttcatgg acgaggaggc ccggaaaggc ggcacgctcg ccgcatacct ccgggcgctc
      541 tccaggcagc ccgatcccct ggccgccgcc caggagggat tcggcgacct ggccaagttc
      601 gaggggcgga tcgcccagta cgcgtcgcgt ccctctctga ccttttttga catggccctg
      661 caggtcactc ggtccgacaa ggatttccgg gtccggccgg tgagcgaggc cgaggctctg
      721 gtgatccggg cggaggttct ggcccagtcc cggaaggagg aggaggcggg gctcctcctg
      781 gaccaggccc gggccctgga tccccgctcc ccccagctgc atgccgccct gggcctgact
      841 gcgctacgga agggggactg gccgggcgcg gaacaggccc tccggagcgc ccaggcgatg
      901 ggaaccacgg atttccgggt gcccctgcac ctggctgaac tggccctgca gggggtcatg
      961 gaccctcccg cctcatcgga ggtgatgctc ggatggctgg aggaggcccg gcgtctggaa
     1021 ccggactacc cgggtatcca cctggcgctc agcaggttac acgcgaggga cccgagggag
     1081 gccgagaagg ccatccaggc tggaagggcg gccatcaaac tggcgccctc ggacatcacc
     1141 atgcgaatga acttcggcag cgtactcatg accctgggcc gggaggcgga agccaaggac
     1201 atcggagacc aggtggcccg gatggcccac gagggatggg agcggcaggc gtcggcatcc
     1261 taccaggcgc agctggctcg tttcctggaa taccgggccg ccacggcgaa ggccgctgag
     1321 gtgccacctc cgacgccgtc cgagaccagc cctcccacgc ctcggaccaa gcccggcgtg
     1381 aaacctctga gattctggct gccggactcc ctggccgacc tgcacaagga ggtgcaggct
     1441 gcggtgatgc aggggcggct ggacgacgcg atccagatgg ttcgggccgc catccccaag
     1501 gccaaaggcc cctacgaaaa gccctccctc aaggccctgc tggaccacct caagggccgg
     1561 aaggccgggt attgagcgcc tccagcctgg gaccatgagg gccggggacc ctggggatgc
     1621 gggggatcgg gcacactgga ggtggccccg ggaccgacct cg
//
LOCUS       DATGWW010000369         1572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_27496, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000369 DATGWW010000000
VERSION     DATGWW010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27496"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1234)
                     /locus_tag="VK150_05345"
     CDS             complement(<1..1234)
                     /locus_tag="VK150_05345"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HLP30764.1"
                     /translation="MTLLLSALDGRITLKGLLGTGGMGEVHRAWDSGLERPVAVKFVR
                     GGDPREADRLLLEARLQARVEHPNVVRVHDTGTLEGRPCILFQLVEGRTFADLGTEGD
                     WRVRVALAAQAARGLGAAHRTGLVHRDVKPANILVEDTEEGPQARLSDFGLARDEEGG
                     LTRSGLMMGTVDFMAPEQVTGAAPVDFRADIYGLGATLYAVFAGRPPFRNSLGTTAEA
                     QSTRELHAATPAGERHPGDLLRRVLEEEPTPITALVPGLPRDLATVIAKAMEKAPERR
                     YATAEALADDLDRVVRGEPILASPVGWLERGGRWARRNPLPARALGAGLLAVLGAIGF
                     VAWSSRRSTLASHEAAQVGAEAKALELRLRLAHLAPAHDLRPVMAKIDASLLLMDQQD
                     QGPASGAVAYARGRVRLLL"
     gene            complement(1231..>1572)
                     /locus_tag="VK150_05350"
     CDS             complement(1231..>1572)
                     /locus_tag="VK150_05350"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLP30765.1"
                     /translation="DDGAIHRHLNRMQQTYRIRRDVLCRALERALGDRLSFQVPEGGL
                     ALWAQVAEGVDVDRWAARALEQGVAFQPGRRFAFDGGPVQALRLGFSNYPESDLEEVA
                     LRMRAALGDDR"
BASE COUNT          208 a          570 c          586 g          208 t
ORIGIN      
        1 cgagaagcag ccggacccgg ccccgggcat aggcaacggc ccccgatgcc gggccctggt
       61 cctgctggtc catgagcagc aggctggcat cgatcttggc catgacgggc cgcaggtcgt
      121 gggccggagc caggtgcgcc agccgcaggc gcagctccag cgccttggct tccgcgccca
      181 cctgcgccgc ctcatgggaa gcgagggttg aacggcggct gctccacgcg acgaacccga
      241 tggcgccaag caccgcgagg aggcctgcgc ccagggcgcg cgcaggaagg ggattccgcc
      301 gagcccacct gcctccacgt tccagccacc ccacggggct cgccagaatg ggctccccgc
      361 gcaccacgcg gtcgagatcg tcggccaggg cctcggcggt ggcatagcgc cgttccggcg
      421 ccttctccat ggccttggcg atgaccgtgg cgaggtcccg ggggagcccg ggcaccaggg
      481 cggtgatggg ggtgggttcc tcctcaagca cgcggcgcag caggtcgccg gggtggcgtt
      541 ctccggcggg ggtggccgcg tgcagttccc gggtgctctg ggcctccgcg gttgtgccca
      601 ggctgttgcg gaaggggggg cggcctgcga acaccgcgta gagcgtggcg cccaggccgt
      661 agatgtcggc gcggaaatcc acgggcgcgg cgcccgtcac ctgctccggg gccatgaagt
      721 ccacggtgcc catcatgagg cccgagcggg tgaggccgcc ttcctcgtcc cgcgccaggc
      781 cgaagtccga caggcgggcc tgggggcctt cctcggtgtc ttccaccagg atgttggcgg
      841 gcttcacgtc gcggtgaacc aggcctgtgc ggtgggccgc gcccagcccc cgggccgcct
      901 gggccgccag ggcgacgcgg acgcgccagt cgccctcggt gcccaggtcg gcgaaggtgc
      961 gtccctccac cagctggaag aggatgcagg ggcgcccctc cagggtgccc gtgtcgtgca
     1021 cgcgcaccac gttcggatgc tccacccgcg cctgcaggcg ggcctccagc agcaggcggt
     1081 ccgcctcgcg gggatcgccg ccgcgcacga acttcacggc cacggggcgc tccagcccgg
     1141 aatcccaggc gcggtgcacc tcgcccatgc ccccggtgcc caacaggccc ttcaacgtga
     1201 tgcggccgtc cagggcgctg agcagcaggg tcatcggtcg tctcccagcg cggcgcgcat
     1261 gcggagggcg acttcctcca gatcggattc gggatagttc gagaagccca ggcgcagggc
     1321 ctgcactggg cctccgtcga aggcgaagcg ccggccgggc tggaaggcca caccctgctc
     1381 cagggcgcgc gcggcccagc ggtccacgtc gacgccttcg gccacctggg cccagagcgc
     1441 caggccgccc tctggcacct ggaagctcag gcggtcgccc agggcccgtt ccagggcgcg
     1501 gcagagcacg tcgcggcgga tccggtaggt ctgctgcatg cggttgaggt ggcggtggat
     1561 ggcaccgtcg tc
//
LOCUS       DATGWW010000370         2562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_27500, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000370 DATGWW010000000
VERSION     DATGWW010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27500"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..738
                     /locus_tag="VK150_05355"
     CDS             118..738
                     /locus_tag="VK150_05355"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HLP30766.1"
                     /translation="MLRRILLPALLLALPLAAQQRVFRVDENHTVIGFKASTLLFDVP
                     GRFTRYQADIQGDPATLEGAKVRITIDTKSINTANNARDNHLRTPDFFDATKYPTITF
                     TSSDVKKAGDRLVVRGTLNLHGVSRELELPFVAAEGMNGADVRTWSYRATLPLDRLEF
                     GVGAESVAAKISLKKQVELDLLLVGFFEEPRAAAGPVKRHAKAAKK"
     gene            780..1397
                     /locus_tag="VK150_05360"
     CDS             780..1397
                     /locus_tag="VK150_05360"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLP30767.1"
                     /translation="MTDAASSEPDLIRRAAAGDSDAFGALVQPHLSLFHNGIHRILGN
                     VADTQDALQDALMRIHRDLPRFEGRSRFSSWGYKVCLNAALMVRRSRVRIHDMERPEP
                     LALGPFDERGHHLETDRRPEWQVEAQAHDLVERQEMRECLARALDELPDSHRIVFVLK
                     DLEDWDTDEIARHLQLAPGTVRQRLHRSRVQLQARLRDHVLGGRP"
     gene            1394..1648
                     /locus_tag="VK150_05365"
     CDS             1394..1648
                     /locus_tag="VK150_05365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30768.1"
                     /translation="MKLLPSCHDVQADLTEYAEGALPFRRRAGIWLHLLLCRVCAAFF
                     RGLMALPGVSKTALAPPEAAPDAALKALAAVQAALGKPKP"
     gene            complement(1645..>2562)
                     /locus_tag="VK150_05370"
     CDS             complement(1645..>2562)
                     /locus_tag="VK150_05370"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HLP30769.1"
                     /translation="GLWRLYRRPEPEEERTAAPEDPSRRAFLRTAALASTGAAAALGV
                     AGARQAYGDPEVTRLDLAFPDLPAGLDGLRLAHLSDLHAGPLVGPELLRRWRDLTERE
                     RPDLVVFTGDLVDSRPDELEPLLEAFRGFQPPFGRFAILGNHDYFDDPRPIWRDLEAD
                     GIRCLENASALVVRGGATLAVMGLQDPMARNGRFRRLVFGPGPRPVEAARDLPADAFR
                     LCLNHRPSEWEQALAAGARLTLSGHTHGGQINPIPGFSSAHLIGPRTQGLYREGEDLL
                     YVSRGLGVVGLPLRIAAPPEIAIITLRRG"
BASE COUNT          382 a          916 c          909 g          355 t
ORIGIN      
        1 cgccgcggaa gccctgggtt tcaccgacct cgacccggtg caggacctgc tgcgcggcct
       61 ccgccgcgac ggcgccatcg ccggtttcct tcccttcccc tagcccgaga ggcctccatg
      121 ctccgacgca tcctcctgcc agccctgctg ctggcccttc cccttgccgc gcagcagcgt
      181 gtcttccgcg tggacgagaa ccacaccgtg atcggcttca aggcctcgac gctgctcttc
      241 gatgtgccgg gccggttcac ccggtaccag gccgacatcc agggcgaccc cgccaccctg
      301 gaaggcgcga aggtccggat caccatcgac acgaaatcca tcaacaccgc caacaacgcc
      361 cgggacaacc acctgcgcac gccggatttc ttcgacgcga cgaagtaccc gacgatcacc
      421 ttcacctcga gcgacgtgaa gaaggccggg gaccggctgg tggtgcgcgg caccctcaac
      481 ctgcacggcg tcagccgcga gctggaactg cccttcgtgg ccgccgaggg gatgaacggt
      541 gccgatgtgc gcacctggtc ctaccgcgcc accctgccct tggatcggct cgagttcggg
      601 gtgggcgccg agagcgtggc cgcgaagatc agcctgaaga agcaggtgga gctggacctg
      661 ctgctggtgg gcttcttcga ggaaccccgg gcggccgcgg gtccggtgaa gcggcacgcg
      721 aaggccgcca agaagtagcg cttgcctgcg ccggggccgc cgccgacact ggcagcggca
      781 tgacggatgc ggcttcctct gaaccagacc tgatccgacg ggccgccgcg ggcgactcgg
      841 atgccttcgg cgcgctcgtc cagccccatc tgtcgctctt ccacaacggg atccaccgca
      901 tcctcggcaa cgtcgccgac acccaggacg cgctccagga cgccctcatg cgcatccacc
      961 gcgatctgcc caggttcgaa ggccggagcc gcttcagcag ctggggctac aaggtctgcc
     1021 tgaacgccgc cctcatggtt cggcgcagcc gggtgcggat ccacgacatg gagcggcccg
     1081 agccgctggc cctgggcccc ttcgacgagc ggggccacca cctggagacg gaccggcgac
     1141 ccgagtggca ggtggaggcc caggcccacg acctggtcga gcggcaggag atgcgggaat
     1201 gcctcgcgcg tgccctggac gagctgccgg attcgcacag gatcgtgttc gtgttgaagg
     1261 atctggagga ctgggacacc gatgagatcg cccggcacct ccagctggcg ccgggcacgg
     1321 tccggcagcg gctccaccgc tcgcgggtgc agctccaggc ccggctccgc gatcacgtcc
     1381 tgggaggccg cccatgaaac tcctgccctc ctgccacgac gttcaggccg acctcactga
     1441 atatgcggaa ggtgcgctgc ccttccgccg ccgcgccggg atctggctgc acctgctgct
     1501 ctgccgggtc tgcgcggcgt ttttccgcgg cctgatggcc ctgcccggcg tatcgaaaac
     1561 ggccctcgcg ccgccggaag ctgcccccga cgcggcgctg aaggccctgg ccgccgtcca
     1621 ggctgccctt gggaaaccga aaccctagcc gcgccgcagg gtgatgatgg cgatctcggg
     1681 cggtgccgcg atgcgcagcg gcaggcccac cacgccgagg ccgcggctca cgtaaagcag
     1741 atcctcgcct tcgcggtaca ggccctgggt gcggggcccg atgaggtggg cgctgctgaa
     1801 gccgggaatg ggattgatct ggccgccgtg ggtgtggccc gacagcgtga gccgcgctcc
     1861 ggcggcgagg gcctgttccc attcgctggg ccggtggttc aggcagaggc ggaaggcgtc
     1921 ggcgggcagg tcccgggcgg cctccacggg ccgggggccg gggccgaaga ccaggcgccg
     1981 gaagcggccg ttccgggcca tggggtcctg caggcccatg accgccaggg tcgcgccgcc
     2041 ccgcacgacg agcgcagagg cgttctcgag gcagcggatg ccgtcggctt ccaggtcgcg
     2101 ccagatgggc cggggatcgt cgaagtagtc atggttgccc aggatggcga agcggccgaa
     2161 gggtggctgg aaaccccgga aggcctcaag cagcggctcc agttcgtcgg ggcggctgtc
     2221 caccaggtcg cccgtgaaga ccacgagatc cggccgttcc cgttccgtga ggtcgcgcca
     2281 gcggcgcagg agctccggcc ccaccaaggg gccggcatgg aggtcgctga ggtgcgcgag
     2341 gcgcaggcca tccaagcccg ccggcaggtc ggggaaggcc aggtcgagac gcgtgacctc
     2401 cggatcgccg taagcctggc gggcgccggc cacgcccaga gcggcggcgg cgccggtgct
     2461 ggccagggcg gcggtgcgca ggaaggcgcg ccggctggga tcttccggcg ccgccgtgcg
     2521 ctcctcctcc ggttccggcc ggcggtagag gcgccagagc cc
//
LOCUS       DATGWW010000371         1706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_110749, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000371 DATGWW010000000
VERSION     DATGWW010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110749"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..483
                     /locus_tag="VK150_05375"
     CDS             <1..483
                     /locus_tag="VK150_05375"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HLP30770.1"
                     /translation="KTTLGPLASAKNAESMAAQVEEARARGARVLAGGRSVVLGKGAF
                     FEPTLITAVDHSMAVMKEENFGPILPVMPVKDDEEALRLVNDSPYGLTSAIYTADTGR
                     AERFAAEADTGTVFMNRCDYLDPALPWTGVKDSGRGTTLSKYGFHAMTRRKAIHFRVG
                     "
     gene            638..>1706
                     /locus_tag="VK150_05380"
     CDS             638..>1706
                     /locus_tag="VK150_05380"
                     /inference="COORDINATES: protein motif:HMM:NF012348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30771.1"
                     /translation="MPTRKRSASRKFLLNGSPVAVPKSIPGIDRVKAIPEDLKARFAA
                     WTAAGVPRAKLALTDIDGVMRGKYLSLDKFASVARDGGGFCDCVLGWDVEDRLYDNVS
                     YTGWHTAYPDAPYRIDLSTERRLSEEGGIPFFLGNFVDPGSGDLHALCPRGVLQRVLD
                     RAEEMGFGVRTGFEYEFFVFDETPHSVRNKRYRDLKPITPGNFGYSVLRASAQSDLFN
                     ALMDYHAALGCPIEGLHCETGAGVWEAALAVDEALKAADMAAVFKTFTKVFFQKRDKM
                     ATFMAKWSLDYPGQSGHLHQSLFDIRTGDPVFHKEGGRHGMSPLMESYVAGLQKYLRG
                     FLVMSAPTVNSYTRLVKGAWAP"
BASE COUNT          310 a          572 c          540 g          284 t
ORIGIN      
        1 aaaaccaccc tggggcctct cgcttccgcg aagaacgcgg agagcatggc cgcgcaggtg
       61 gaggaggccc gcgcccgcgg ggcccgcgtc ctcgccggcg ggcggtccgt cgtgctcggc
      121 aagggcgcct tcttcgagcc gacgctgatc accgccgtgg atcactccat ggcggtgatg
      181 aaggaggaga acttcgggcc catcctcccg gtgatgcccg tgaaggacga cgaggaggcc
      241 ctgcggcttg tcaacgacag tccctacggc ctcacgtccg ccatctatac cgccgatacc
      301 gggcgcgcgg agcgcttcgc cgcggaggcc gacaccggca ccgtgttcat gaaccgctgc
      361 gactacctgg atccggccct gccctggacg ggggtcaagg acagcgggcg cggaacgacg
      421 ttatcgaaat acggattcca cgcgatgacg cggaggaagg cgatccattt cagggtgggg
      481 tgagagagtg accaatgact agttgccaga gacaagtgat cagtgacaag tggccagtga
      541 tcagtgacaa gcaatacgtg tggatcttca actggtcact tgtcactggt cactgatcac
      601 tggccacttc cgaagcatcg aatcaacgga gtcccatatg cccacccgca aacgctccgc
      661 ctcccgcaag tttctcctga acggctcccc ggttgccgtg cccaagtcca tccccggcat
      721 cgaccgcgtc aaggccatcc ccgaggacct caaggcccgc ttcgcggcct ggaccgccgc
      781 gggcgttccg agggcgaagc tggccctcac cgacatcgac ggcgtgatgc ggggcaagta
      841 cctctccctc gacaagttcg cctcggtggc ccgcgacggc ggcgggttct gcgactgcgt
      901 gctgggctgg gacgtggagg acaggctcta cgacaacgtg tcctacaccg gctggcatac
      961 cgcctacccc gacgcgccct atcgcatcga cctttccacc gagcgccgtc tctccgagga
     1021 ggggggcatc cctttcttcc tgggcaactt cgtggacccg gggtccggcg acctccacgc
     1081 cctgtgcccc cgcggcgtgc tgcagcgcgt gctggaccgg gccgaggaga tgggcttcgg
     1141 agtcaggacc ggcttcgagt acgagttctt cgtcttcgac gagacgccgc acagcgtgcg
     1201 aaataaacgc tacagagatc tcaaacccat cacccccggc aacttcggct attccgtgct
     1261 ccgcgcctcg gcccagagcg acctcttcaa cgccctcatg gactatcacg cggccctggg
     1321 ctgccctatc gagggactgc actgtgagac cggcgcgggg gtgtgggagg cggccctcgc
     1381 cgtggacgag gcactcaagg ccgccgacat ggccgcggtg ttcaagacct tcaccaaggt
     1441 ctttttccag aagcgtgata agatggccac cttcatggcc aagtggtccc tcgactaccc
     1501 aggccagagc gggcacctgc atcagagcct gttcgacatc cgcaccgggg atccggtctt
     1561 ccacaaggag ggggggcggc acggcatgag tcccctcatg gagagctacg tggccggcct
     1621 gcaaaagtac ctgaggggct ttctcgtgat gagcgcgccc acggtgaaca gctacacccg
     1681 tcttgtgaag ggagcctggg cgccca
//
LOCUS       DATGWW010000372         3376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_436536, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000372 DATGWW010000000
VERSION     DATGWW010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3376
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436536"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            102..896
                     /locus_tag="VK150_05385"
     CDS             102..896
                     /locus_tag="VK150_05385"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HLP30772.1"
                     /translation="MSKTRFKVGVCESPADLRADTPEWTTFSQSVARESTDLFLLSEL
                     PFGPWISSGDRFEDTAWAGSMQAHQEGLRCLGDLGADWVAGTRPMVQGERRVNHAFLW
                     NESAGLADIHTKQHFPNEEGYFETTWFQAGSTRFQVAQAGPLRVGYMICTEVWFNEHA
                     RAYGRAGAHLILVPRVVGTETLSRWLGAMRMAAMVSGCYVLSSNRGGVDAKGQVYGGT
                     GWIINPNGDLVAKTSASDPTAFHEIDLDLVREAQRSYPCYVSELTW"
     gene            983..2200
                     /locus_tag="VK150_05390"
     CDS             983..2200
                     /locus_tag="VK150_05390"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLP30773.1"
                     /translation="MGVLERVAVALLAITQNKLRAFLTMLGIIVGVGAVIAMIGIGEG
                     SKRASIALIQNMGSNMLTIFPGSGGNRFGPAAMGSAEILLESDVPLIQQELGASSVVA
                     ASPQVQTSRPIIYQNSNYVTQVQGTNTEFLQIRGWEVASGRFFTEAEVRGMAKVCVIG
                     QTVKDNLFPNGEDPVGETVRVGALPFQVVGVLDKKGAGMWGDQDDLIVAPYSTVMRKI
                     MGRDKIQRIMVSAQEGKAELAEAEVTALLRQRMKVAQKDDNPFQIRKQDDIVQMQSQQ
                     AGILTALLAVAASISLVVGGIGISNIMLVSVTERTREIGIRRALGATQRSILWQFLVE
                     AVVLSVLGGIIGIGFAYSAVFILQKFQVPAVTESWAVALGLGFSGVVGVAAGFLPAVK
                     AAKLDVIDALRYE"
     gene            2207..>3376
                     /locus_tag="VK150_05395"
     CDS             2207..>3376
                     /locus_tag="VK150_05395"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLP30774.1"
                     /translation="MSEPGTDHDPYAALRNSDYRWFITSLGLVTLGLQMQGVVVGWQV
                     YDRTGDPLALGLVGLSEALPFLAVALFGGHVADRLNRLRLCAVSTLCLAFCSALLWLF
                     TWRSATGPAAQAVAPIYGIIFLTGIVRAFYRPANVALGTDLLPKDLYANGSTWRVSVF
                     HTGMVIGPATGGLVYAWRGPVAAHFLVMALMLAGLAGLLLIHYVPKPVRPRVGSLFES
                     LAEGLRFVFSRRLLLGAISLDLFAVLFGGAVAVLPVFAKEILHTGPQGLGLLRAAPAV
                     GSVLMGITLAHRPPLRRAGRTLLLCVAGFGAATIAFALSRSFPLSLLLLAVSGALDNV
                     SVVLRATLLQTLTPEHMLGRVSSVNQVFIGSSNEIGAFESGLAARLLGLVPSVVFG"
BASE COUNT          479 a         1184 c         1146 g          567 t
ORIGIN      
        1 cccgccatcc acccctgccg ccactggacg gatcagcggc agtccgcgat ccgccagcat
       61 tgggaagggc accagcccca tccggccagg agtcgacagc catgtccaag acccgtttca
      121 aagtgggcgt ttgcgagagt cctgccgacc tgcgcgccga cacccccgaa tggaccacct
      181 tcagccagtc ggtggcccgg gaatccacgg acctcttcct cctgagcgag ctgcccttcg
      241 ggccttggat ctcctccggc gatcgcttcg aggacacggc ctgggctggc tccatgcagg
      301 cgcaccagga ggggctgcgg tgtctgggcg acctcggtgc ggactgggtg gcgggcaccc
      361 ggccgatggt ccagggcgag cggcgcgtca accatgcctt cctctggaac gagtcggcgg
      421 gcctcgccga catccacacg aaacagcact tcccgaacga ggaaggctac tttgagacga
      481 cctggttcca ggcgggcagc acgcgcttcc aggtcgccca ggcaggtccg ctccgggtgg
      541 gttacatgat ctgcaccgag gtgtggttca acgagcacgc ccgggcctat ggccgggctg
      601 gggcccatct gatcctcgtc ccccgggtgg ttggcaccga aaccctctcc cgctggctgg
      661 gggccatgcg catggcggcg atggtgtcgg gctgctacgt gctctcctcg aaccggggcg
      721 gcgtggacgc gaaaggccag gtgtacggcg gcaccggctg gatcatcaac ccgaatggcg
      781 acctcgtggc caagacctcg gcctcggatc cgaccgcctt ccacgagatc gacctggacc
      841 tggtccggga agcccagcgg agctatccct gctacgtgag cgagctgacc tggtagccgc
      901 ccggagcgcc cttgagccgg gcgttatcct ggaagcctga catcgcggcg ccggagcgct
      961 ccggcggatt cgggaggcac ccatgggtgt gctcgagcgg gtcgcggtgg ccctgctggc
     1021 catcacccag aacaagctca gggccttcct gacgatgctc ggcatcatcg tcggcgtggg
     1081 ggcggtcatc gccatgatcg gcatcggcga gggctcgaag cgcgcctcca tcgccctgat
     1141 ccagaacatg ggctccaaca tgctcacgat cttcccaggc agcggcggca accgcttcgg
     1201 cccggccgcc atgggcagcg cggagatcct cctggagagc gatgtgcccc tgatccagca
     1261 ggaactcggc gccagcagcg tggtggccgc gtccccccag gtgcagacca gccggcccat
     1321 catttaccag aacagcaatt acgtgaccca ggtgcagggc acgaacacgg agttcctcca
     1381 gatccgcggc tgggaggtgg cgagcggccg gttcttcacc gaggccgagg tgcgcggcat
     1441 ggccaaggtc tgcgtcatcg gccagaccgt gaaggacaac ctcttcccca acggcgagga
     1501 ccccgtgggc gagacggtgc gggtgggcgc gctgcccttc caggtggtgg gcgtactgga
     1561 caagaagggc gcgggcatgt ggggcgacca ggacgacctc atcgtggccc cctactccac
     1621 ggtgatgcgc aagatcatgg gccgggacaa gatccagcgc atcatggtga gcgcccagga
     1681 gggcaaggcg gagctggccg aggccgaagt gacggcgctc ctgcgccagc gcatgaaggt
     1741 cgcgcagaag gacgataatc ccttccagat ccgcaagcag gacgacatcg tgcagatgca
     1801 gagccagcag gcgggcatcc tcaccgcgct gctcgccgtc gcggccagca tctcgctggt
     1861 ggtgggcggc atcggcatct cgaacatcat gctggtgagc gtcacggagc gcacccgcga
     1921 gatcggcatc cgccgcgccc tgggcgccac ccagcgcagc attctctggc agttcctcgt
     1981 cgaggcggtg gtgctctccg tgcttggggg catcatcggc atcggcttcg cctacagcgc
     2041 cgtcttcatc ctgcagaagt tccaggtgcc ggccgtgacc gagtcctggg ccgtggctct
     2101 aggcctgggc ttctcgggcg tggtgggcgt ggcggcgggc ttcctgcccg cggtgaaagc
     2161 cgccaagctg gacgtgatcg acgccttgcg gtacgaatag cccttcatga gcgagcccgg
     2221 caccgatcac gacccctatg cggcgcttcg gaattccgac taccggtggt tcatcacgtc
     2281 gctgggcctc gtcaccctgg gcctgcagat gcagggcgtg gtggtgggtt ggcaagtcta
     2341 cgaccgcacc ggcgatcccc tggccctggg cctggtgggg ctctccgagg cgctgccctt
     2401 cctggccgtg gccctcttcg gcggccacgt ggcggaccgc ctgaaccggc tgcggctctg
     2461 cgcggtgtcg acgctgtgcc tcgccttctg ctcagccctg ctctggctct tcacctggcg
     2521 ctcggcgaca ggcccggcgg cccaggccgt ggcgcccatc tacggcatca tcttcctcac
     2581 gggcatcgtc cgggccttct accggcccgc caacgtggcc ctgggcacgg acctgctgcc
     2641 caaggacctc tacgccaacg gctccacctg gcgggtctcc gtcttccaca cgggcatggt
     2701 catcggtccc gccacgggcg gcctggtcta cgcgtggcgg gggcccgtgg ccgcccactt
     2761 cctcgtgatg gcgctgatgc tggcgggcct ggcgggcctg ctgctgatcc actacgtgcc
     2821 caagccggtg cggccgaggg ttggttccct cttcgagagc ctggccgagg gactgcgctt
     2881 cgtgttctcc cggcgcctgc tcctgggcgc catcagcctg gatctcttcg ccgtgctttt
     2941 cggcggcgcc gtggccgtgc tgccggtctt cgccaaggag atcctccaca cgggccccca
     3001 gggtctgggc ctcctgcggg cggcgccggc cgtgggctcc gtgctcatgg ggatcaccct
     3061 ggcccaccgg ccgcctctgc gtcgggccgg ccggacgctg ctgctctgcg tggcgggctt
     3121 cggcgcggcg accatcgcct tcgccctcag ccgcagcttc ccgctcagcc tgctcctgct
     3181 ggccgtcagc ggcgccctgg ataacgtcag cgtggtgctc cgagccaccc tgctgcagac
     3241 cctcacgccc gagcacatgc tgggccgcgt gtcctctgtg aaccaggtct tcatcggctc
     3301 cagcaacgag atcggcgcct tcgaaagcgg gctcgcggcg cggctcctgg gcctggtgcc
     3361 ctcggtggtc ttcggg
//
LOCUS       DATGWW010000373         2445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_253762, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000373 DATGWW010000000
VERSION     DATGWW010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2445
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253762"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1730
                     /gene="mutS"
                     /locus_tag="VK150_05400"
     CDS             <1..1730
                     /gene="mutS"
                     /locus_tag="VK150_05400"
                     /inference="COORDINATES: protein motif:HMM:NF003810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HLP30775.1"
                     /translation="SLLALLDQCRTRMGSRLLKAWLEQPLRDRPSLERRWSQVAWLTE
                     DRRRTPIQTLLAQVPDLDRLLGRVALGLATPPELAQLREGLAVLQKLPSRIQDEGWAV
                     EVADLGLWPGNTPLCATLCGELQRCLAEAPPLDLEKGGVIREGVDAELDAVRRLARDA
                     KQVMLELEEEERRQSGIQSLKIKYNRVFGYYFEITKSNLGAVPAHFLRKQTLANAERF
                     TTEKLVAFEQRLLSAESDQARLESLQFQRLLALVLEHRADLTTLARAVAALDVLAALA
                     ERARLSSWTRPELGEARELILAAARHPMLEARLGRECIPNDLQFTAAQPMAVVTGPNM
                     GGKSTFLRTAALLVVLAQTGSFVPAELMRFGVVDRIFTRIGASDQLAKGQSTFMVEMT
                     ETARILNQATAASLVILDEIGRGTSTRDGLALAEAIAVFLRDLQSGPKADATGGTPRT
                     LFATHYFEMTKLADDSRIQNLHVEVQEWEEQLHFLHRVAPGPADRSYGIQVARLAGLP
                     KAVIQKAQRLLAQAPEAPPRAPMPSQPALPLFEVEPDALRAELEALDLSRMTPLEALN
                     WLAMKQAGR"
     gene            complement(1727..2362)
                     /locus_tag="VK150_05405"
     CDS             complement(1727..2362)
                     /locus_tag="VK150_05405"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HLP30776.1"
                     /translation="MTRLPDVPPRPAIRGILFDFGNVICAFDHGRFLAALAPLCGQSP
                     EALARRIVGSDLPRAYESGEISSQAFLAGVSERCGFDFPEAPFVQAFTDIFTPIPSTF
                     ELIGRLKPRYRLGLVSNTNPWHAEHGIRTTSVYPLFDAVALSHEVRAMKPDPRIFATA
                     LERIGLPPEACVFIDDIAAFADAASELGIHGLTYTGPQALRDDLARLGVAG"
BASE COUNT          375 a          857 c          876 g          337 t
ORIGIN      
        1 ggtcgctgct cgccctgctg gaccagtgcc ggacccgcat gggctcccgg ctgctgaagg
       61 cctggcttga gcagcccctg cgggaccgtc cctccttgga acggcgctgg tcgcaggtgg
      121 cctggctcac ggaggaccgc cgccgcacgc ccatccagac cctgctggcc caggtgcccg
      181 acctcgaccg cctgctgggc cgcgtggccc tgggcctcgc cacgccgccg gagctggccc
      241 agctccgtga aggcctagcg gtgctccaga agctgccctc gagaatccag gatgagggct
      301 gggccgtcga ggtggccgac ctgggcctgt ggcccgggaa cacacccctc tgcgccacgc
      361 tgtgcggcga gctgcagcgc tgcctcgccg aggcgcctcc actggatctg gagaagggcg
      421 gcgtcatccg cgaaggtgtg gacgccgagc tcgacgccgt ccgccgcctc gcccgcgacg
      481 cgaagcaggt gatgctggag cttgaagaag aggagcgccg ccagagcggc atccagagcc
      541 tgaagatcaa gtacaaccgc gtgttcgggt actacttcga gatcacgaaa tccaacctgg
      601 gcgccgttcc cgcccacttc ctccgcaagc agaccctggc caacgccgag cgcttcacca
      661 ccgagaagct ggtggccttc gagcagcggc tgctcagcgc cgaaagcgac caggcccgcc
      721 tggagtcgct gcagttccag cgcctcctgg ccctggtgct cgagcaccgg gcggatctga
      781 ccaccctggc ccgggccgtg gcggccctcg acgtcctcgc cgccctggcg gaacgcgcgc
      841 ggctctccag ctggacccgg cccgaactgg gcgaagcgcg cgagctcatc ctggccgcgg
      901 cccgccaccc catgctggag gcgcggctgg gccgggagtg catccccaac gacctgcagt
      961 tcacggccgc gcagcccatg gcggtggtga cgggtccgaa catgggcggc aagtccacct
     1021 tcctgcgcac cgcggccctc ctggtggtgc tggcccagac cggatctttc gtgcccgccg
     1081 agctgatgcg cttcggcgtg gtcgaccgca tcttcacgcg catcggcgcc tcggaccagc
     1141 tggccaaggg ccagtccacc ttcatggtcg agatgacgga gactgcgcgg atcctcaacc
     1201 aggccaccgc cgcgagcctg gtgatcctcg acgagatcgg ccgcggcacc tccacccggg
     1261 acgggctcgc cctggccgag gccatcgcgg tgttcctgcg ggatctccaa tcaggaccga
     1321 aggccgatgc tacggggggg accccgcgga ccctcttcgc cacccactac ttcgagatga
     1381 ccaagctggc cgacgacagc cgcatccaga atctgcatgt ggaagtgcag gagtgggagg
     1441 agcagctgca cttcctccac cgggtggcgc cggggccggc ggaccgcagc tacggcatcc
     1501 aggtggcgcg cctggcgggc ctgccgaagg ctgtcatcca gaaggcccag cgcctgctgg
     1561 cccaggcccc tgaggcgccg ccgcgcgcgc ccatgcccag ccagccggcc ctgcccctct
     1621 tcgaggtgga gccggacgcg ctccgcgccg agctggaagc cctcgacctc agccgcatga
     1681 cgccgctgga ggccctgaac tggctggcca tgaagcaggc tgggcgctag cccgccacgc
     1741 cgagccgggc caggtcgtcc cgcagggcct gggggcccgt gtaggtgagg ccatggatcc
     1801 cgagttccga tgccgcgtcg gcgaaggcgg cgatgtcgtc aatgaagacg caggcctccg
     1861 gcggcaggcc gatccgctca agggccgtcg cgaagatgcg cgggtccggc ttcatggcgc
     1921 ggacctcgtg ggagagggcg acggcgtcga agagggggta cacggaggtg gtccggatgc
     1981 cgtgctcggc gtgccaggga ttggtgttgg agacgaggcc cagccggtag cgaggcttca
     2041 ggcgtccgat gagctcgaag gtggacggga tgggggtgaa gatgtccgtg aaggcctgca
     2101 cgaacggcgc ctccgggaag tcgaatccgc accgctccga cacgcccgcc aggaaggcct
     2161 gggaagagat ctcgccgctt tcgtaggccc tgggcaggtc cgagccgacg atgcgccgcg
     2221 cgagggcctc cgggctctgg ccgcagaggg gggccagggc cgcgaggaat cggccgtggt
     2281 cgaaggcgca gatgacgttg ccgaaatcga agaggatccc gcggatggcg ggccggggcg
     2341 ggacatcggg aaggcgggtc atgggcggtt cctgggagcg cgacgcttcc aatgtcgccc
     2401 aatccggccg cgggggcgta gacttcctgc atgtcccagc ccctg
//
LOCUS       DATGWW010000374         1741 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_436741, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000374 DATGWW010000000
VERSION     DATGWW010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436741"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..420
                     /locus_tag="VK150_05410"
     CDS             <1..420
                     /locus_tag="VK150_05410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30777.1"
                     /translation="PANLPRLQALMESTIRKGTARKGFHQVLRASHMQKIETGGKTGT
                     LDGEDPKGRYDWFIGYARLKDEPHKGIALAVMLVHGTYASQRSTVLAALLVRDWLEAQ
                     EKARKRAEPTAVTGASREKGAAEALAAAPDPHDARDP"
     gene            440..1540
                     /locus_tag="VK150_05415"
     CDS             440..1540
                     /locus_tag="VK150_05415"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HLP30778.1"
                     /translation="MARKKVALILSGGGARGAYQAGILSAWKDIFRQNGSIEIIVGVS
                     AGSINAVRLMQSAPNYASGVDAIEHLWGSLIPDEIFESDFQAVVRNLMRVLGSSRRRH
                     RAEGESIINAILSTAPLHDYLRRNVDMGQVQQRLRTLPDHSLAISCFDYTDMRNVTFF
                     QTRETCPSWERPTMRGVRTALTIEHVIASCAVPLIFPPVLMDGHFYGDGSLRNMTPLN
                     AAIRLGAERIIIISLRGDSYQRQTNIAPTLGRIAATMLDSMFLDAVDIDSQFMNRVNL
                     LGTKIPEPERDVRIIDLCRVGPMLDFSMIASKYRKRFPRTLRYLFGGWITSDLLSYLL
                     FDGEYARELMGLGRRDGELFMDVVGEWLLGND"
BASE COUNT          323 a          632 c          484 g          302 t
ORIGIN      
        1 cccgccaacc tgccgcgcct ccaggccctc atggagagca ctatccgcaa aggcaccgcc
       61 cgcaagggct tccaccaggt gctgcgcgct tcccacatgc agaagatcga gaccggaggc
      121 aaaaccggga ccctcgacgg agaggatccc aagggtcgct atgactggtt catcggctac
      181 gcgcgcctca aggacgagcc ccacaagggc atcgccctgg ccgtcatgct ggtgcacggg
      241 acctatgcca gccagcgtag caccgtgctc gccgccctcc tcgtccgcga ctggctcgag
      301 gcccaggaaa aggccaggaa gcgcgccgag cccaccgccg tgaccggcgc ctcccgcgaa
      361 aaaggcgccg cggaagccct cgccgcggcc cccgatcctc acgacgcacg ggacccataa
      421 ggccggggcc cgcgagacca tggccaggaa aaaagtcgcc ctcatactct ccggcggcgg
      481 ggcccgcggg gcctaccagg ccggcatcct cagcgcctgg aaggacatct tccgccagaa
      541 cgggagcatc gagatcattg tgggcgtgtc tgccggctcc atcaacgccg tccgcctcat
      601 gcagtccgcc cccaactatg ccagcggcgt ggacgccatc gagcacctct ggggcagcct
      661 catccccgac gagatcttcg agtccgactt ccaggcggtg gtgcgaaatc tcatgcgcgt
      721 gctcggatct tcgcgccgcc ggcaccgcgc cgagggtgaa tccatcatca acgccatcct
      781 ttccaccgcg cccctgcacg actacctgcg gcgcaacgtg gacatgggcc aggtgcagca
      841 gcgtctccgc acccttcccg accacagcct ggccatctcg tgcttcgact acaccgacat
      901 gcgtaatgtg accttcttcc agacgcggga aacctgcccc tcctgggagc gtcccaccat
      961 gcgcggcgtg cgcaccgccc ttaccatcga gcacgtgatc gcctcctgcg ccgtgcccct
     1021 catcttcccc ccggtcctga tggacggcca cttctatggc gacggatcgc tccgcaacat
     1081 gacccccctc aatgcggcca tccgcctggg ggccgagcgc atcatcatca tcagcctgcg
     1141 cggagattcc taccagcgtc agaccaacat cgcccccacc ctggggcgca tcgccgcgac
     1201 catgctcgac tccatgttcc tggacgcggt ggatatcgac tcgcagttca tgaaccgggt
     1261 caacctgctc ggaacgaaga tccccgagcc ggaacgcgac gtgcgcatca tcgatctgtg
     1321 ccgggtgggg cccatgctgg atttcagcat gatcgcctcc aagtaccgca agcgcttccc
     1381 gaggaccctg cgctacctct tcggcggctg gatcacctcg gatctcctga gctacctgct
     1441 cttcgacggg gagtacgccc gcgagctcat gggcctcggc cgacgcgacg gcgaactctt
     1501 catggacgtc gtgggagagt ggcttttggg gaatgattga taagatttaa aattgaagaa
     1561 tgaaaattga agaatgaaga tttggcgagg tccccctcct ccaatcttca ttcttcattc
     1621 ttcaattttc attcttcatt cttttcaccg ccgcggcgac tactcttcaa caagcggctc
     1681 atcctcatcg tccacccgat gcttcccctt ccccggcagg gtggcgatgg cgcccaggga
     1741 g
//
LOCUS       DATGWW010000375         6776 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_74910, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000375 DATGWW010000000
VERSION     DATGWW010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6776
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74910"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..1037)
                     /gene="argC"
                     /locus_tag="VK150_05420"
     CDS             complement(57..1037)
                     /gene="argC"
                     /locus_tag="VK150_05420"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: protein motif:HMM:TIGR01850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HLP30779.1"
                     /translation="MILGASGYGGGELLRWLSTHPAVKTLRGTARSHAGKPFHAQHPN
                     LRGLVEGSFEATPDWVALAQSEAPVLFAALPHGELAKLWPDLQAEWDRLGLTERLTVI
                     DLSADFRLDPAWVYGLVDWQPERMRGARRIANPGCFATALQLALLPLAQWKPAFVAVT
                     AATGSSGSGAAPSDTTHHPTRATDFRAYKMLGHQHEAEVLRTLATLGWEAPMSFIPQS
                     APMVRGIFATAQFPLPRGVDTVALRAHFEAFFRGRFFVRIVDGSPRVAATTGSAFADL
                     GVAARPGHGAVMVALDNLGKGMAAQAVQNLNLVLDLPEWTGLRTAGAYPG"
     gene            complement(1169..2221)
                     /locus_tag="VK150_05425"
     CDS             complement(1169..2221)
                     /locus_tag="VK150_05425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30780.1"
                     /translation="MRIHVDKLASVTRNLRLGRTLTLSPDILLEEGSVIACRVRGEKS
                     TYNQLEDPYGRMSTLHDGDILVGALGHRNALQGYEGVMPASLKPGDTVNLLNMGGVIG
                     QCLSHNPDVGKPFELEVLGQVLVFPEFQSRAGQPAHIRMGALKGTGLSAHCPVVYVAG
                     TCMNAGKTAAACATIRQLSRAGYRVGACKLTGVSLMRDALAMRDYGAEVALDFTDAGI
                     VCTDAGSAAGVSHIIFSELASHGVDVIVAETGDGIMGEYGVQAILQDPELKALSGVFI
                     LCANDPVGAAGGVHHLTSAFGIQADLIAGPATDNRVGERFVATLGLPARNARADADAL
                     GKFVLGLLEPKIAAKA"
     gene            complement(2324..3511)
                     /gene="argG"
                     /locus_tag="VK150_05430"
     CDS             complement(2324..3511)
                     /gene="argG"
                     /locus_tag="VK150_05430"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HLP30781.1"
                     /translation="MSQLAVLAFSGGLDTSFCVLHLKEQGYDVATVTVNTGGFSPEEL
                     ARIEAASPRLGAISHTTVDARAGLFEGYLRYLVYGNVLRGQMYPLSVSAERVCQARAV
                     AELAKEMGAKAIAHGSTGAGNDQVRFDVAFRALAPDLEILTPIRDLGLSRAEEMAYCA
                     ERGVVFPEKTKDYSINEGMWGTSVGGRETLDAWTTLPEAAFPGGVIGSLSPKTLTISF
                     DGGVPVALDGNAMDPVTLIAQLNAIGRPYGIGRGVHLGDTILGIKGRVGFEAPAAHLL
                     IGAHRELEKLVLSGKQLFWKESLGNLYGSLLHEGHFFDPLARDLEAFLESSQDRVRGE
                     VRLTLHPRSFVVEGVQSPYSLMDPRIATYGEANKLWTGAEAAGFAKVFGVQQTLTLKA
                     KNN"
     gene            complement(3657..5015)
                     /gene="argH"
                     /locus_tag="VK150_05435"
     CDS             complement(3657..5015)
                     /gene="argH"
                     /locus_tag="VK150_05435"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HLP30782.1"
                     /translation="MRPEATTLWAKDLPLDAAVHRFTVGEDPDTDLALLAWDALGSAA
                     HARMLAATGLIPEADAVSLVRGLRRIANLARQGAFPIPPHMEDGHTAIEADLTRNLGP
                     VGGRIHLGRSRNDQVILALRLYLRDALVRLGLRVADLAEAFLAFAHTHQDLPLPGYTH
                     LRRAMPSTFGLWAAAFAEGLLEELEALQGVYGRLDRCPLGSAAGFGVPLPIDRELTAK
                     LLGFSKVQRSPIDVQNSRGRHETAVLQWASSVGGVLEKFLWDVSLYSTEEFGFLKLPD
                     AYTTGSSIMPQKKNPDVVELARGRCRELRGTAGLVEQLASGLPSSYHRDLQLLKKPLV
                     TALRSADDLFGVLKPLLPALQVRAEAAAAASSDDLYAAHQAYVFVQEGMPFREAYRKV
                     AQQIQDGTFAPDRGALTATHLGGAGNLALEDLAADLTAARGWIEAKRDVHAQAEAALW
                     AN"
     gene            complement(5012..6091)
                     /locus_tag="VK150_05440"
     CDS             complement(5012..6091)
                     /locus_tag="VK150_05440"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HLP30783.1"
                     /translation="MNARELITTLVGTPSVSGEEGPLADLVQDLLTARGFDVQRQGHN
                     LWFTFGQKGGTRLLLNSHLDTVPPCAGWEGDPFTPVWHGSRIQGLGANDAKGCVAAIL
                     LAAFDLADQELPGEVVVALTAEEETGGNGIATILDRLGPLDGAVVGEPTGLRICAAQR
                     GLLVLKCTARGQSGHVAHAQMLGAENAIHKAARDISRIAAMEFPVHPLLGSQKAQVTQ
                     IQGGLRRNQVPDACEFFVDLRTGPDQDHDALARDFQQQLESEVAVHSKRYLPKGTDPG
                     DPIVRAALSAAGKAGPVGSGTTSDWAFLGGIPAVKAGPGDTFRSHRPDEYVTLEELEA
                     GAAFYAQLATTYFKLQAVHSTEGAR"
     gene            complement(6088..>6776)
                     /gene="argB"
                     /locus_tag="VK150_05445"
     CDS             complement(6088..>6776)
                     /gene="argB"
                     /locus_tag="VK150_05445"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HLP30784.1"
                     /translation="LDAAKMVFAGQVHMDLLADLQAAGVPAVGLTGLDAGLVKAHRRP
                     PVSVVPDGATEAQLVDYGLVGDIDAIDPHVLSHLLDGNFLPVVAPLSGGEDGAIYNTN
                     ADTIAASLAAALGAEKLFFLLSVPGLLKDVARSSSLIPHATLEELAGFEAKGIISGGM
                     RPKLTAVKAALHGGVPSAHLVSGLAPDALLAEIFTNEGSGTMIVPGIVPGTIPSTIPS
                     IGANATAVAG"
BASE COUNT         1043 a         2188 c         2505 g         1040 t
ORIGIN      
        1 tcatcccata ggccgaagtg ttgtctataa aaggacctat gggtcagcca tccgtgtcac
       61 cccggatagg caccagcggt gcggagtccc gtccattcag ggaggtccag gaccaggttg
      121 aggttctgca cagcctgggc cgccatcccc ttgcccaggt tgtccagggc caccatcaca
      181 gccccgtggc cagggcgggc ggccacgccc aggtcggcga aggcgctgcc ggtggtggcc
      241 gccacgcggg gggagccgtc cacgatgcgc acgaagaacc ggccccggaa gaaggcttcg
      301 aaatgagccc gcagggccac ggtgtccacg ccacggggca gcgggaattg ggccgtggcg
      361 aagatgccgc gcaccatggg cgcgctctgg ggaatgaagc tcatgggcgc ctcccagccg
      421 agggtggcga gggtccgcag cacttcggcc tcatgctggt ggccgagcat cttgtaagcg
      481 cgaaaatccg tggcccgggt gggatggtgc gtggtgtccg agggcgccgc gcccgagccg
      541 ctggagcctg tggcggcagt gaccgccacg aaggcgggct tccactgggc gaggggcagc
      601 agggccagct gcagcgccgt ggcgaagcag cccgggttgg cgatgcgcct ggcgccccgc
      661 atgcgctcgg gctgccagtc caccaggccg tagacccagg cggggtccag ccggaagtcc
      721 gccgacaggt cgatgacggt gagccgctcc gtgagtccca gtcgatccca ttcggcctgg
      781 aggtcgggcc acagcttggc caattccccg tggggcagcg cggcgaagag caccggcgcc
      841 tcgctctggg ccagcgcgac ccagtccggc gtggcctcga agctgccctc gaccaggccc
      901 cgcaggttcg gatgctgggc gtggaagggc ttgcccgcgt ggctgcgggc cgtgccgcgc
      961 agcgtcttca ccgccggatg cgtggagagc cagcgcagca gctccccccc gccgtagccc
     1021 gacgcgccga ggatcaagac atccactgat ttcataaaga ctcactgaga aagcagctat
     1081 ccacagattt cacagattca cacagattaa gaaacagaca ctggttttcg catctgtgaa
     1141 atctgtggaa tctgtggatt tcagtttctt atgcttttgc tgcgatcttg ggctcaagca
     1201 gccccagcac gaacttgccg agggcatcgg cgtcggcccg ggcgttgcgg gcggggaggc
     1261 ccagggtcgc cacgaagcgc tcgcccacgc ggttgtccgt ggcggggccg gcgatgaggt
     1321 cggcctggat gccgaaggcc gacgtcaagt ggtgaacgcc gcccgcggcg cccacgggat
     1381 cgttggcgca caggatgaac acgccgctga gggccttgag ctctggatcc tgcaggatgg
     1441 cctgcacgcc gtactcgccc atgatgccgt cgccggtctc ggccacgatg acatccacgc
     1501 cgtgggaggc cagctccgag aagatgatgt gggacacgcc cgcggcgctg cctgcatcgg
     1561 tgcagacgat gcccgcatcc gtgaagtcca gggccacttc ggcgccgtag tcgcgcatgg
     1621 ccagggcatc gcgcatgagg gagacgccgg tgagcttgca ggcccccacc cggtagccgg
     1681 cccggctgag ctggcggatg gtggcgcagg cggcggcagt cttgccggcg ttcatgcagg
     1741 tgccggccac gtagaccacg gggcagtggg cggagagccc tgtgcccttg agcgccccca
     1801 tgcggatgtg ggcgggctgg cccgcgcggg actggaactc ggggaagacc aggacctggc
     1861 ccagcacttc cagctcgaag ggcttgccca cgtccgggtt gtgcgacagg cactggccga
     1921 tgacgccgcc catgttcagc aggttcacgg tgtcgccggg cttcagcgag gccggcatga
     1981 cgccctcgta gccctgcagc gcgttgcggt gacccagagc gcccacgagg atgtcgccat
     2041 cgtgcagcgt gctcatgcgg ccgtaggggt cctccagctg gttgtaggtg cttttctcgc
     2101 cccgtacgcg gcaggcgatg accgagccct cttccagcag gatgtcggga gaaagcgtga
     2161 gcgtccggcc cagccgcagg ttgcgggtga ccgaggcgag cttgtcaacg tggatgcgca
     2221 tcatggggac ctcttgaagg attcaccacc agggcaccaa gaaaaccaga atcagatcgg
     2281 ttgcagttct tggtgtcttg gtgtcttggt gtcttggtgg tgatcagttg tttttggcct
     2341 tgagtgtcaa tgtctgctgc acgccgaaaa ccttggcgaa gcccgcggcc tcggcgccgg
     2401 tccagagctt gttggcttcg ccgtaggtgg cgatgcgggg gtccatgagc gagtagggcg
     2461 actgcacgcc ttccacgaca aagctgcggg ggtggagcgt gagccgcacc tcgccgcgga
     2521 cgcggtcctg gctggattcc aggaaggcct ccaggtcgcg ggccaggggg tcgaagaagt
     2581 ggccctcatg gagcaggctg ccgtagaggt tgcccaagga ttccttccag aagagctgct
     2641 tgccgctcag caccagcttc tccagctccc ggtgcgcgcc gatgagcagg tgcgccgctg
     2701 gggcttcgaa gcccacccgg cccttgatgc cgaggatggt gtcgccgaga tgcacgccgc
     2761 gtccgatgcc gtagggccgg ccgatggcgt tgagctgcgc gatgagggtg acggggtcca
     2821 tggcgttgcc gtccagggcc acgggcacgc cgccgtcaaa gctgatggtc agcgtcttcg
     2881 gcgagagaga tccgatgacg ccgccgggga aggccgcttc cggcagggtg gtccaggcgt
     2941 ccagggtttc ccggccaccc acgctggtgc cccacatgcc ctcattgatg gagtagtcct
     3001 tggtcttctc ggggaacacc acgccgcgct cggcgcagta ggccatctcc tcggcgcggg
     3061 agaggcccag gtcgcggatg ggggtgagga tctccaggtc gggcgccagg gcgcggaaag
     3121 ccacgtcgaa gcgcacctgg tcgttgccgg cgccggtaga gccgtgggcg atggccttgg
     3181 cgcccatctc cttggccagc tccgccacgg cccgggcctg gcagacccgc tcggcggaca
     3241 ccgacagggg atacatctgg ccccgcagca cgttgccgta gaccaggtag cgcaggtagc
     3301 cctcgaagag cccggcgcgg gcatccaccg tggtgtggct gatggccccc aggcggggcg
     3361 aagcggcctc gatgcgggcc agctcttccg gcgagaaccc gccggtgttg acggtcaccg
     3421 tggccacgtc gtagccctgc tccttgaggt ggagcacgca gaacgacgtg tcgaggccgc
     3481 cggagaaggc gaggacggcg agctggctca tagggaatcc cttaagaaaa agctgaacca
     3541 ccaaggcacc aagacaccaa gaaaagccac ccccgtttgt cttggtgtct tctcgatatc
     3601 cgcgcagcgg atacgcgaga cgaaatcact tctggtgtct tggtggtgat cagttgtcag
     3661 ttcgcccaca gcgcagcctc cgcttgggca tggacgtcgc gcttggcctc gatccagcca
     3721 cgagcggcgg tgaggtcggc ggcgaggtcc tccagggcca ggttgccggc gccgcccaga
     3781 tgggtggcgg tgagggcgcc gcggtccggg gcgaaagtgc cgtcctggat ctgctgcgcg
     3841 accttgcggt aggcctcgcg gaagggcatg ccctcctgca cgaagacgta ggcctggtgg
     3901 gcggcgtaga ggtcgtcgga ggacgcggcg gccgcggctt cggccctcac ctgcagggcg
     3961 ggcagcaggg gcttgagcac gccgaagagg tcgtcggcgc tgcggagtgc cgtcaccagg
     4021 ggcttcttca gcagctgcag gtcgcgatgg tagctggagg gcaggcccga ggcgagctgc
     4081 tccaccagcc ccgcggtgcc ccgcagctcg cggcagcggc cccgggccag ctccaccacg
     4141 tcggggttct tcttttgggg catgatgctc gagccggtgg tgtaggcgtc cggcagcttc
     4201 aggaagccga actcctcggt gctgtagagg gagacgtccc acaggaactt ctccagcacc
     4261 ccgcccacgg aagacgccca ctgcagcacg gcggtctcgt ggcggccccg gctgttctgc
     4321 acgtcaatgg ggctccgctg caccttcgag aaaccgagga gcttcgccgt gagttcgcgg
     4381 tcaatgggca ggggcacgcc gaaccccgcg gcggatccca gggggcagcg gtccaggcgg
     4441 ccgtagacgc cctggagggc ctccagctct tccagcagcc cttcggcgaa ggccgcggcc
     4501 cagaggccga aggtgctggg catggcccgg cgcagatggg tgtagcccgg cagcggcagg
     4561 tcctggtggg tgtgggcgaa ggccaggaag gcctcggcca ggtcggccac ccgcaggccc
     4621 aggcgcacca gggcatcccg caggtagagc cgcagggcga ggatcacctg gtcgttgcgg
     4681 gaccgcccca ggtggatgcg gccgcccacg gggcccaggt tgcgggtgag gtccgcctcg
     4741 atggccgtgt gaccgtcctc catgtggggg gggatgggaa aggcgccctg gcgggccagg
     4801 ttggcgatgc gccgcagacc ccgcaccagg gagacggcat cggcctcggg gatgagcccc
     4861 gtggcggcga gcatccgggc gtgggccgcg ctgcccaggg cgtcccacgc cagcagggcc
     4921 aggtcagtgt ctggatcctc gcccacggtg aagcggtgca cggcggcatc caggggcagg
     4981 tccttggccc agagggtggt ggcttcgggc ctcatcgggc accttccgtc gaatggaccg
     5041 cctgcagctt gaagtaggtg gtggcgagct gggcgtagaa cgcggcgccg gcctcgagct
     5101 cctcgagggt cacgtactcg tcaggccggt ggctgcggaa ggtgtcgccg gggccagcct
     5161 tcaccgcggg gatgccgccc aggaaggccc agtcggaggt ggtgcccgac cccacggggc
     5221 cggccttgcc cgcggcggaa agggcggcgc ggacgatggg atcgccgggg tcggtgccct
     5281 tggggaggta gcgcttggag tggacggcga cctcgctttc cagctgctgc tggaagtccc
     5341 tggcgagggc gtcgtggtcc tggtcggggc ccgtgcggag gtccacgaag aactcgcagg
     5401 cgtccggcac ttggttgcgg cgcaggccac cctggatctg ggtgacctgc gccttctggg
     5461 aacccagcag cgggtggacg gggaactcca tggcggcgat gcggctgatg tcgcgggccg
     5521 ccttgtggat ggcgttctcg gcgccgagca tctgggcgtg ggccacgtgg ccgctctggc
     5581 cccgggcggt gcacttcagc accagcaggc cccgctgggc cgcgcagatg cgcagccctg
     5641 tgggctcgcc caccaccgcg ccatccaggg ggcccagccg gtccaggatg gtggcgatgc
     5701 cgttgccgcc ggtctcctcc tcggcggtga gggcgacgac gacttcgccc ggcagctcct
     5761 gatcggcgag gtcaaaggcg gccagcagaa tggcggccac gcaccccttg gcgtcgttgg
     5821 cgcccagacc ctggatccgg gagccatgcc agacgggtgt gaagggatcg ccctcccagc
     5881 cggcgcaggg cgggacggtg tcgaggtggg agttgagcag cagccgcgtg ccgcccttct
     5941 ggccgaaggt gaaccagagg ttgtggccct ggcgctggac gtcgaagccc cgggcagtga
     6001 ggaggtcctg caccagatcg gccaaggggc cctcctcgcc ggacacgctg ggggtgccga
     6061 cgagggtggt gatcagctcc cgggcgttca tccggccacc gccgtggcgt tcgcgccgat
     6121 gctgggaatg gtgctaggaa tggtgccggg aacgatcccc ggaacgatca tcgtcccgct
     6181 gccctcattg gtgaagatct ccgccagcag cgcgtccggg gccaggccgc tcaccaggtg
     6241 ggcgctgggc accccgccgt gcagggcggc cttcaccgcc gtcagcttcg ggcgcatccc
     6301 gccgctgatg atgcccttgg cctcgaagcc ggcgagctcc tccagggtgg catggggaat
     6361 gagcgacgag gaccgggcca catccttcag caggcccggc accgacagca ggaagaagag
     6421 cttttccgcc cccagggccg cggccaggct ggcggcgatg gtgtcggcgt tggtgttgta
     6481 gatggcgccg tcctcgccgc cggaaagcgg cgcgaccacg ggcaagaagt tgccgtcgag
     6541 caggtggctg aggacatggg gatcgatcgc gtcgatgtcg ccgaccagcc cgtagtccac
     6601 cagttgagcc tcggtggcgc cgtcgggcac caccgacacg ggcggtcgcc ggtgggcctt
     6661 caccaggccc gcgtcgaggc ccgtgaggcc cacggcgggc acgcccgccg cctgcaggtc
     6721 cgccaggagg tccatgtgca cctggccggc gaagaccatc ttggcggcgt ccagca
//
LOCUS       DATGWW010000376         1874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_253853, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000376 DATGWW010000000
VERSION     DATGWW010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253853"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VK150_05450"
     CDS             complement(<1..471)
                     /locus_tag="VK150_05450"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HLP30785.1"
                     /translation="MSDAMAQFRDAFFEEATELADGMEATLLSLDLAAVEAEDLHSLF
                     RAAHSIKGNAGTFGFPAVAAFTHQLESTLEPVRQGTRPMTSELRELLLQGVDLIRSHL
                     HHARVGDLLPQKEQTAQEALVAKLQEDRSAPAVAATAESAIAPPREGATAGGTGF"
     gene            complement(479..841)
                     /locus_tag="VK150_05455"
     CDS             complement(479..841)
                     /locus_tag="VK150_05455"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30786.1"
                     /translation="MGQCILTVDDSSTMRQMIAFTLKGADFEVIEAGDGVEALEVAKG
                     RKLSLIITDVNMPRMDGLTLVQRLRALPEFKFTPILVLTTESDGSMKQKGKDAGATGW
                     IVKPFSPEKLLDVVNKVI"
     gene            complement(855..>1874)
                     /locus_tag="VK150_05460"
     CDS             complement(855..>1874)
                     /locus_tag="VK150_05460"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HLP30787.1"
                     /translation="APVALAPAGRHREALLRMANREARMLDGQVDFLTPELMQVDGLV
                     REAAGTLEDALKTLDQSVQHQHRLADQVQQAMRISLEGGDLDESSQAVGASIMHTLDG
                     FVSNMLEISKSSVLLVDEVEDIRRRSRQMEEMLGELSEIAGRTHLLSLNASIEAAHAR
                     QFGAGFAVVAGEVSKLADRSTALSATIQEQILGTRQALERTDSHVQAIASKDMNLAIE
                     SKGESELLVQALQGSHERVKLLVGELEANAQTIAQQVGHVVRSLQFEDLVHQTLMACL
                     KELGNLQEQAQAWKTFGQRLADGQEEVEALASLETDLEGIEQARVQFRAVKRGSLAAG
                     DVDLF"
BASE COUNT          281 a          671 c          586 g          336 t
ORIGIN      
        1 gaacccggtg ccgcccgccg tcgcgccttc ccgcggcggg gcaatcgccg actctgcggt
       61 ggcggccacc gctggggcgg atcggtcctc ctgcaatttg gccaccaggg cctcctgcgc
      121 cgtctgctcc ttctggggca gcagatcgcc aacgcgggca tggtgcagat ggctgcggat
      181 caggtccacc ccctggagca gcagctcccg cagctccgac gtcatgggcc gcgtgccctg
      241 ccgcacgggt tcgagggtgc tctccagctg gtgggtgaaa gcggccaccg cggggaagcc
      301 gaaagtgccc gcatttccct tgatcgaatg cgccgcccgg aagagcgagt ggaggtcctc
      361 ggcctctacg gcggcaaggt cgagggagag cagggtggcc tccatgccat ccgcgagctc
      421 ggtggcctcc tcgaagaagg cgtctcggaa ctgggccatc gcgtcggaca tgggtgcctc
      481 agatgacttt gttcaccaca tcaaggagct tctcggggct gaagggcttc acaatccagc
      541 ccgtggcgcc cgcatccttc cccttctgct tcatggaacc gtccgactcg gtggtcaaca
      601 cgaggatcgg cgtgaacttg aactccggca gggcgcgcag ccgctgcacc agcgtgaggc
      661 cgtccatccg cggcatgttc acgtccgtga tgatgaggga gagcttgcgg cccttcgcca
      721 cctccagggc ttcgacgccg tccccggcct cgatgacctc gaagtccgcc cccttcaggg
      781 tgaaggcgat catctgacgc atcgtgctcg agtcgtccac ggtgaggatg cactgtccca
      841 tctgccggct cctgctagaa aaggtctacg tcgcccgcgg cgagcgagcc ccgcttcacc
      901 gcgcggaatt gcacccgggc ctgctcgatg ccttccaggt ccgtttcaag gctggccagg
      961 gcttcgactt cctcctgccc atccgccagc cgctgcccga acgtcttcca ggcctgggcc
     1021 tgctcctgca ggttgcccag ctccttcagg caggccatca gcgtctgatg caccaagtcc
     1081 tcgaactgga ggctccgcac cacatgcccc acctgctggg cgatggtctg cgcattcgcc
     1141 tcgagctctc ccaccagcag cttcacccgc tcatggctcc cctgcagggc ttgcaccagc
     1201 agctcggact cgcccttgga ctcgatggca agattcatgt ccttgctggc gatggcctgc
     1261 acgtgggaat ccgtccgttc cagcgcctgg cgggtgccca ggatctgctc ctggatcgtc
     1321 gcactcaggg ccgtgctgcg gtccgcgagc ttggacacct cgcccgcgac cacagcgaaa
     1381 ccagcaccga actgccgggc gtgggcggcc tcgatgctgg cgttgaggga gagcaggtgg
     1441 gtccggcccg cgatctccga aagctctccc agcatctcct ccatctgccg ggagcggcgc
     1501 cggatgtcct ccacctcgtc gaccagcagc acggaggatt tcgagatctc cagcatgttg
     1561 gagacgaagc cgtccagggt gtgcatgatc gaggcaccca cagcctggct gctctcgtcg
     1621 aggtcgccac cctccaggga gatcctcatg gcttgctgca cctggtccgc cagccggtgc
     1681 tggtgctgca cactctggtc cagggtcttc agcgcgtcct ccagcgttcc cgccgcttcc
     1741 cgcaccagtc cgtccacctg catcagttca ggggtgagga aatccacctg cccgtccagc
     1801 atgcgcgctt cccggttcgc catgcggagc agcgcctcgc ggtggcgacc ggcgggcgcc
     1861 agcgccaccg gagc
//
LOCUS       DATGWW010000377         1541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_74962, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000377 DATGWW010000000
VERSION     DATGWW010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74962"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..>1541
                     /locus_tag="VK150_05465"
     CDS             141..>1541
                     /locus_tag="VK150_05465"
                     /inference="COORDINATES: protein motif:HMM:NF015087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase family protein"
                     /protein_id="HLP30788.1"
                     /translation="MVSDPIKPFVVFEMANNHMGRLDHGLQILQAFGRLVRDFEGRFD
                     FGFKLQYRNLDTFIHPDFQQRMDLKFIKRFQETRLSEADFRRLKEEMDAQGFVPVCTA
                     FDEASVDLVEAHGFRRLKVASCSLGDWPLMERMARSPLPVIASTAGASAAQLDQVVSF
                     FDHRQRPLTLLHCIGEYPTPVAHFQLNQIEYLKARYPQHPIGFSSHEDPDNMRLVQMA
                     VAKGARVFERHVGVPTPEAPLNAYSMNPDQTRRWLEAAVEALDACGESEHRYQPTREE
                     TESLHALRRGVYVTEPVAAGEVIDPGRVFLAMPTQPGQLTANDLSKYAEFRALGPIPA
                     KGPVMTGDIRRTDHREQVFEIVNRVRALLLAGHAVVPEKADVEISHHYGIERFDEVGA
                     TILNVVNRAYCKKLIVVLPGQRHPEQYHKQKEETFHILHGTLAVKLDGVEREARAGDI
                     LTVERGVRHEFSSPDGA"
BASE COUNT          269 a          536 c          497 g          239 t
ORIGIN      
        1 cccaggctgg cgtggggaaa agggcagccc ctaccccgag gttggcccgt ccgtggctca
       61 gggaatgccc aaccgtctgg cgttcgcctg taccctgatg gaaacggcga ccttccgaga
      121 gacaccagcg aggcacctcc atggtttcag atcccatcaa acccttcgtg gtcttcgaaa
      181 tggccaacaa ccacatgggc cggctcgacc acgggctgca gatcctccag gccttcggcc
      241 gcctcgtgcg ggatttcgaa ggccggttcg acttcgggtt caagctccag taccggaacc
      301 ttgacacctt catccacccg gatttccagc agcggatgga tctgaagttc atcaagcggt
      361 tccaggagac ccggctctcg gaagccgatt tccggcggct caaggaggag atggacgccc
      421 agggcttcgt gccggtctgc acggccttcg acgaagcctc ggtggatctg gtggaggccc
      481 acggcttccg caggctgaag gtcgccagct gctccctcgg cgactggccc ctgatggaac
      541 ggatggcgcg gtcgcccctg ccggtcatcg cctccacggc cggggcctcc gcggcgcagc
      601 tggaccaggt cgtgagcttt ttcgaccacc ggcagcggcc cctgaccctc ctgcactgca
      661 ttggcgagta tccgacgccg gtggcccact tccagctcaa ccagatcgag tacctgaagg
      721 cgcggtaccc ccagcacccc atcggattct cctcccatga ggacccggac aacatgcgcc
      781 tcgtccagat ggcggtggcc aagggcgctc gggtcttcga gcggcacgtc ggcgtgccca
      841 cccccgaggc cccgctcaac gcctactcca tgaatcccga ccagacccgg cgctggctgg
      901 aggcggccgt ggaggccctg gacgcctgcg gcgaatctga gcaccgctac cagcccaccc
      961 gcgaggaaac ggaaagcctc catgccctgc ggcgcggtgt ctatgtcacc gagccggtgg
     1021 ccgcgggaga ggtgatcgat cccggccggg tgttcctggc catgcccacc cagcctggtc
     1081 agctcacggc caacgacctg tcgaagtacg cggaattccg ggccctgggc cccattccag
     1141 ccaagggccc ggtcatgacg ggggacatcc gccgcaccga ccaccgggag caggtcttcg
     1201 agatcgtgaa ccgggtgcgg gccctgctcc tggcgggcca cgccgtggtg cccgaaaagg
     1261 ccgatgtgga gatctcccac cactacggca tcgagcggtt cgacgaggtg ggggcgacca
     1321 tcctcaatgt ggtgaaccgg gcctactgca agaagctgat cgtggtgctg ccgggccagc
     1381 ggcatccgga gcagtaccac aagcaaaagg aggagacctt ccacatcctc cacggcacgc
     1441 tcgccgtgaa gctggacggc gtcgagcggg aggcccgggc cggcgacatc ctcacggtgg
     1501 agcggggcgt gcgccacgaa ttcagctcgc cggacggggc c
//
LOCUS       DATGWW010000378         3254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_436836, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000378 DATGWW010000000
VERSION     DATGWW010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3254
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436836"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..525)
                     /locus_tag="VK150_05470"
     CDS             complement(<1..525)
                     /locus_tag="VK150_05470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30789.1"
                     /translation="MSDETLPQTPEVPEAPAGPYVYDYAASPQRQIVMPKTVPLPSLR
                     TYQAEVKAAAEADEAKWQKMLADFETAKAKAEAEGKDAPKPPVRPVPRKDDNDMKTPW
                     PQEATDPDLLRLKELLGDKVEEIFEQAGELTCQVAKEAILEALQLCRQDAKLNYEMLA
                     DQTGTHYPAAKDFAF"
     gene            complement(525..1028)
                     /gene="nuoB"
                     /locus_tag="VK150_05475"
     CDS             complement(525..1028)
                     /gene="nuoB"
                     /locus_tag="VK150_05475"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF005012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HLP30790.1"
                     /translation="MNQPTALEHILITTKVEKVMNWSRATSVWPVTFGLACCAIEMMA
                     AGASRFDFDRFGAGIFRATPRQADLMIVAGTVTYKMAPIIKTLYDQMPEPKWVIAMGS
                     CATAGGPFDSYHTVQGVDKVIPVDVYIPGCPPRPESLIYGFMKLQDKIMTSSLADRYK
                     DIFEEVG"
     gene            complement(1025..1378)
                     /locus_tag="VK150_05480"
     CDS             complement(1025..1378)
                     /locus_tag="VK150_05480"
                     /inference="COORDINATES: protein motif:HMM:NF012717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HLP30791.1"
                     /translation="MRGYASILLLILVAVALPIIIWNLSWLLRPNWPSAAKYSSYECG
                     ITTTTEAREKFSVRYYLVAVMFLVFDVETVFLMPWAIQMKELAVFGFIELGLFLFLLL
                     FGYGYIWSKGALTWE"
     gene            1513..3144
                     /locus_tag="VK150_05485"
     CDS             1513..3144
                     /locus_tag="VK150_05485"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspE/PulE family protein"
                     /protein_id="HLP30792.1"
                     /translation="MSPSNPPVPSDAVAAGDQTLTDFRPVRDLYPTLDLTREPVDFAL
                     FQALPLDLMLKHHFVPVQEREGVLWLAMADPLDLTTQDMLRLRLKRPLRFAGAPLAQI
                     QEVLKKSESGQKVMDEAGEALKIQVLHEEDLDDEVLDLERLTDKDEAPIVRLVDTTIF
                     NALQRRASDIHLETTATGFQIKYRIDGSLYPAADPIDRRFASPIISRVKVMSELDIAE
                     KRKPQDGRFKLKVRGRAIDFRVSIMPTIHGEDAVIRILDKENLTEEFQALTLEILGFS
                     AHELARLRRFAREPYGMFLVTGPTGSGKTTTLYAVLSEIRAPEDKIITIEDPVEYQLE
                     GVTQIPVNEKKGLTFALGLRSILRHDPDKILVGEIRDPETAQIAIQSALTGHLVFTTV
                     HANNVLDVLGRFQHMGVEVYNFVSSLNCILAQRLVRVLCTKCKRPAPKPTPQELEENG
                     VDEAWLRSATLFDRVGCVDCHGTGFRGRQAIIEFMGLNDELRELLIQRAPVREVKAAA
                     RRGGMQFLRESAVEKVRAGITTFAEINKVTFREGS"
BASE COUNT          556 a         1103 c         1043 g          552 t
ORIGIN      
        1 gaaggcgaaa tccttggcgg cgggatagtg cgtgccggtc tggtcggcca gcatctcgta
       61 gttcagcttg gcgtcctggc ggcagagctg gagggcctcc agaatggcct ccttcgccac
      121 ctggcaggtc agctcgccgg cctgctcgaa gatctcctcc accttgtcgc cgaggagctc
      181 tttcagccgg agcaggtccg gatccgtcgc ctcctggggc cagggggtct tcatgtcgtt
      241 gtcgtccttg cgggggacgg gacggacggg gggcttgggc gcatccttgc cctcggcttc
      301 agctttggcc ttggccgtct cgaaatccgc gagcatcttc tgccacttgg cctcatcggc
      361 ctcggcggcg gccttcacct cggcctggta ggtccgcagg ctgggcaggg gcacggtctt
      421 cggcatgacg atctggcgct ggggggaggc cgcgtagtcg tagacgtagg gcccggccgg
      481 agcttccggg acttccggtg tctgggggag ggtctcgtcc gacatcagcc gacctcctcg
      541 aagatgtcct tgtaccggtc ggcgaggctg ctggtcatga tcttgtcctg cagcttcatg
      601 aacccgtaga tgagggactc tggccggggc gggcagccgg ggatgtagac atccaccggg
      661 atgaccttgt ccacgccctg gacggtgtgg tacgagtcga agggcccacc ggcggtcgcg
      721 caggagccca tcgcgatcac ccacttgggc tcaggcatct ggtcgtagag ggtcttgatg
      781 atcggggcca tcttgtaggt caccgtgccg gccacgatca tcaggtcggc ctggcggggc
      841 gtcgcccgga agatgccggc gccgaagcgg tcgaagtcga agcggctggc gccggcggcc
      901 atcatctcga tggcgcagca ggccaggccg aaggtcacgg gccacacgct ggtggcgcgg
      961 gaccagttca tgaccttctc caccttggtg gtgatgagga tgtgctcaag ggcggtgggt
     1021 tgattcattc ccatgtgagg gctcccttgg accagatgta gccgtagccg aacagcagca
     1081 ggaagaggaa caggcccagc tcgatgaagc cgaagacggc cagttccttc atctggatcg
     1141 cccacggcat caggaagacc gtttccacgt cgaacacgag gaacatcacg gccaccaggt
     1201 agtagcgcac ggagaacttc tcccgggcct cagtggtggt ggtgatgccg cactcgtacg
     1261 acgagtactt cgcggcgctg ggccagttgg ggcgcagcag ccacgataaa ttccagatga
     1321 tgatcggcag ggccactgct accagaatca gcagcaggat ggacgcgtac ccacgcatgg
     1381 agcctccagg accagtcatt gtggagtgcg ggtcccgcgc aggtcaacga tcgaagctaa
     1441 ccctcgcgtc ctttgtgact caggtccgat tctgatcgtt cggggctggc gcccttgagc
     1501 taggatgctt ccatgtcgcc ttcaaatccc ccggttcctt cggatgccgt cgccgccggc
     1561 gaccagacgc tcaccgactt ccggccggtg cgggacctct accccaccct cgacctgacc
     1621 cgggaaccgg tggacttcgc gctgttccag gcgctgcccc tcgacctgat gttgaagcac
     1681 cacttcgtcc cagtgcagga gcgggagggc gtgctctggc tggccatggc cgatcccctg
     1741 gacctcacca cccaggacat gctccggctt cgcctcaagc ggcctctccg gttcgccggc
     1801 gcccccctgg cccagatcca ggaagtgctg aagaaatccg agagcggcca gaaggtcatg
     1861 gatgaggccg gcgaggccct caagatccag gtgctccacg aggaggatct cgatgacgag
     1921 gtgctcgacc tggagcgcct caccgacaag gacgaggccc ccatcgtccg cctggtggac
     1981 accaccatct tcaacgccct gcagcgccgg gcctcggaca tccacctcga gaccacggcc
     2041 accggcttcc agatcaaata ccgcatcgac ggtagcctct accccgccgc cgaccccatc
     2101 gaccgccgct tcgcttcgcc catcatcagc cgcgtcaagg tcatgtccga gctcgacatc
     2161 gccgagaagc gcaagcccca ggacggccgc ttcaagctca aggtgcgcgg ccgggccatc
     2221 gacttccgcg tgagcatcat gcccaccatc cacggcgagg acgcggtgat ccgcatcctg
     2281 gacaaggaga acctcaccga ggagttccaa gccctcacgc tggagatcct gggtttctca
     2341 gcccacgagc tggcccgcct ccgccgcttc gcccgcgaac cctacggcat gttcctggtg
     2401 accggcccca cgggatcggg caagaccacc accctctacg cggtgctcag cgagatccgg
     2461 gcccccgagg acaagatcat taccatcgag gatcccgtcg agtaccagct cgagggcgtc
     2521 acgcagatcc ccgtgaacga gaagaagggc ctcaccttcg ccctgggcct gcgctccatc
     2581 ctgcgccacg accccgacaa gatcctcgtg ggcgagatcc gcgatcccga gaccgcccag
     2641 atcgccatcc agtccgcgtt gacgggccac ctggtcttca ccaccgtcca cgccaacaac
     2701 gtgctggacg tgctgggacg cttccagcac atgggcgtcg aggtctacaa cttcgtgtcg
     2761 tcgctgaact gcatcctcgc tcagcgcctg gtgcgcgtgc tctgtaccaa gtgcaagcgc
     2821 cccgccccca agcccacgcc ccaggagctg gaggagaacg gcgtggacga agcctggctc
     2881 cgcagcgcca cgctgtttga ccgcgtgggc tgcgtggact gccacggcac cggcttccgg
     2941 ggccgccagg cgatcatcga gttcatgggc ctgaacgacg agctccgcga gctgctcatc
     3001 cagcgggcac ccgtccgcga ggtgaaggcc gccgcccgcc gcgggggcat gcagttcctc
     3061 cgcgagagcg ccgtggagaa ggtgcgcgcc gggatcacga cgttcgccga gatcaacaag
     3121 gtgaccttcc gggaagggtc ctgatcagga gcccttcacc agctcccgct ccaggctctg
     3181 cagccgcttg aggcgcgcga aggtgccggt ctggagggcc agctcctcgg ggctcccgag
     3241 ctggaccatg cggc
//
LOCUS       DATGWW010000379         1622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_253989, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000379 DATGWW010000000
VERSION     DATGWW010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253989"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            177..>1622
                     /gene="dnaG"
                     /locus_tag="VK150_05490"
     CDS             177..>1622
                     /gene="dnaG"
                     /locus_tag="VK150_05490"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HLP30793.1"
                     /translation="MRDREIVERVRDATDLLALVGQAVKLRKQGSAHVGLCPFHAERS
                     PSFQVVANRGFYHCFGCGKHGDAFTWLMEREGMTFPEALDQLARAAGIDLPQRRERPS
                     VEVDLETRMRSALESAQAFFEGQLARHEGARAYLRDRGYEGPFLAEAGFGMAPDAWDA
                     LVNHLRGLNFSGELLEQAGLASRSERGTQIDFLRNRLTIPIHDARGRVVAFGGRIMGE
                     GQPKYLNTRDTPLFHKGGTLFGFHRAKGAMKDGALVVEGYFDVLQLHQHGIHQAVAPL
                     GTALTEEHLKALGRFTRRVILCFDGDAAGRRAMEKSLRMALPLGFEVRLLELPQGEDP
                     DTWCLKLGGEAFRDLLRAAPDWTAFMVDRAMEGKDLRRITDRMGAFKDLLDFLPYLPR
                     TTESRDLFASLAHQLQVPLQELDRAVKGRQAPLPQAEEGIAQAPVLPDLDDLIRSLLL
                     LSAAGHWRRVQDIPPAWWETLTGAPILQALLD"
BASE COUNT          239 a          617 c          529 g          237 t
ORIGIN      
        1 gctccgggtg gcgttcaagc tcatggagaa gcgcctgtag ctgccggccc ggaacgccgg
       61 aggcggtatg ctggtggaag ggcccttctc tccaccccga cttcatcccc gactccttcc
      121 cgcctccatc ggcgacccgc cgcaagcgtg gttccttctc tcggaatgta tcaaccatgc
      181 gtgaccgcga gatcgtcgag cgtgtccggg atgccacgga cctcctggcc ctggtgggcc
      241 aggcggtgaa gctgcgcaag cagggctcgg cccacgtggg tctctgcccc ttccacgccg
      301 agcgcagccc cagcttccag gtggtggcca accggggctt ctaccactgc ttcggctgcg
      361 gcaagcacgg cgacgccttc acctggctca tggagcgcga gggcatgacc ttccccgagg
      421 cgctggacca gctggcccgg gccgccggca tagacctgcc ccagcgccgg gagcgcccct
      481 ccgtcgaggt ggacctggaa acccgcatgc ggtcggccct ggaatccgcc caggcctttt
      541 tcgaagggca actggcgcgg cacgagggcg cccgcgccta cctgcgcgac cggggctacg
      601 aaggcccttt tctagccgag gcgggcttcg gcatggcgcc cgacgcctgg gatgccctgg
      661 tgaaccacct gcggggcctg aacttctccg gcgagctgct ggagcaggcc ggcctcgcca
      721 gccgcagcga gcgcggcacc cagatcgact tcctgcgcaa ccgcctcacc attcccatcc
      781 acgacgcccg gggccgggtg gtggccttcg gcggccgcat catgggtgaa gggcagccca
      841 agtacctgaa cacccgcgac acgcccctct tccacaaggg cggcaccctc ttcggcttcc
      901 accgggccaa gggcgccatg aaggacggag ccctggtggt ggaaggctat ttcgacgtgc
      961 tgcagctgca ccagcacggc atccaccagg cggtggcgcc cctgggcacg gccctcaccg
     1021 aggagcacct caaggccctg ggccgcttca cccgccgggt gatcctctgc ttcgacggcg
     1081 acgccgcggg ccgccgggcc atggagaaga gcctgcgcat ggccctgccc ctcggcttcg
     1141 aggtgcggct gctggagctg ccccagggcg aagatcccga cacctggtgc ctcaagctgg
     1201 gcggcgaggc cttccgcgac ctgctgagag ccgcgccgga ctggaccgcc ttcatggtgg
     1261 accgggccat ggaaggcaag gacctccggc gcatcacgga ccgcatgggg gccttcaagg
     1321 acctgctgga tttcctgccc tacctgcccc ggaccacgga aagccgcgac ctcttcgcca
     1381 gcctggccca ccagctgcag gtgcccctcc aggagctgga ccgggccgtg aagggccgcc
     1441 aggcgcccct tccccaggcg gaggagggga tcgcccaggc ccccgtcctc cccgacctcg
     1501 acgacctcat ccgcagcctc ctcctcctga gcgccgccgg ccattggcgc cgggtgcagg
     1561 acatcccccc ggcctggtgg gaaaccctca ccggcgcccc gatcctccag gctctcctgg
     1621 ac
//
LOCUS       DATGWW010000380         1787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_254205, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000380 DATGWW010000000
VERSION     DATGWW010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254205"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..1270)
                     /gene="sucC"
                     /locus_tag="VK150_05495"
     CDS             complement(113..1270)
                     /gene="sucC"
                     /locus_tag="VK150_05495"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HLP30794.1"
                     /translation="MNIHEYQAKELLRQYKVTTPDGKVAQDAEEARMITKEFGGASVV
                     KAQIHAGGRGKGGGVKFATDPDKAVELFKAMLGMQLVTKQTGAEGRKVRTVFISKPID
                     IARELYLSFLVDRASSRVTILASTEGGVEIEEVAEKTPEKIVKVAVDPALGLCGFQAR
                     QVAFALGLEGDAFKKGVVFLQNLYKLFVEKDCSMVEINPLVVTKDGDVTALDAKIGFD
                     DNALFRHPDVLAFRDLNEEAEEEVEASKFNLNFIKLDGQIGCMVNGAGLAMGTMDIIK
                     YHGGSPANFLDVGGGATEDAVKNAFRIILQDPAVKAVLVNIFGGIMRCDIIATGVVNA
                     VKEGGIKVPVVVRLEGTNVEEGKKILADSGLNLIVAKDLKDAAEKVVASIS"
     gene            1373..>1787
                     /locus_tag="VK150_05500"
     CDS             1373..>1787
                     /locus_tag="VK150_05500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30795.1"
                     /translation="MAQIDRLLAHVISKAGSRLELKADKKPRLELKNGEALELLPNPL
                     PAVMVEVLAGDVVPPQLKGAWEKEGQTEFDYDLSGQCFHIRLSRYADTPQIHAEHVGP
                     SKVASPPPPPAPLTEIKAPAPAAPPASTPAPGATAP"
BASE COUNT          285 a          610 c          561 g          331 t
ORIGIN      
        1 acctctctgg attcgaattc gggttccatg gatgggatga gggtgcgggt atcccgcgca
       61 ctcatccagg gggcccgggg ttctgcgcgc agcgcggaac cccgggacag aatcaactga
      121 tggaggccac caccttctcg gcggcgtcct tcaggtcctt ggcgacgatc aggttcaggc
      181 cgctgtcggc gaggatcttc ttgccctctt ccacgttggt gccctcgagg cgcacgacca
      241 ccggcacctt gatgccgcct tccttcacgg cgttcacgac gccggtcgcg atgatgtcgc
      301 agcgcatgat gccgccgaag atgttcacca gcaccgcctt cacggcggga tcctgcagga
      361 tgatgcggaa ggcgtttttg accgcatcct cggtggctcc gccgccgaca tccaggaagt
      421 tggccgggga cccgccgtgg tacttgatga tgtccatggt gcccatggcc aggcccgcgc
      481 cgttcaccat gcagccgatc tggccgtcca gcttgatgaa gttcaggttg aacttgctgg
      541 cctcgacctc ctcctcggcc tcctcgttga ggtcgcggaa agccagcaca tccgggtgcc
      601 ggaacagggc gttgtcatcg aagccgatct tggcgtcgag ggcggtgacg tccccgtcct
      661 tggtgaccac cagggggttg atctccacca tggagcagtc cttctccacg aagagcttgt
      721 agaggttctg caggaagacc acgcccttct tgaaagcatc gccctccagg cccagggcga
      781 aggccacctg ccgcgcctgg aacccgcaga ggcccaaggc cggatccacg gccaccttga
      841 cgatcttctc gggggtcttc tcggccactt cctcgatctc gacgccgccc tcggtggagg
      901 ccaggatcgt cacgcggctg gaggcccggt ccaccaggaa gctcaggtag agctcccgag
      961 cgatgtcgat gggcttggag atgaagaccg tgcggacctt ccggccctcg gccccggtct
     1021 gcttggtgac gagctgcatg cccagcatgg ccttgaacag ctccaccgcc ttgtcggggt
     1081 cggttgcgaa tttcacgccg ccgcccttgc cccggccgcc cgcatggatc tgcgccttca
     1141 cgacgctggc cccgccgaac tccttggtga tcatgcgggc ttcttccgcg tcctgggcga
     1201 ccttcccgtc aggggtggtc accttgtact gccgaagcag ctctttggct tggtattcgt
     1261 ggatgttcat gcaggctcca ggaaagatca ccttccagtc tagcggccgg cgggctttga
     1321 ccgaaccccc aaggctgtga cccgtggcat cctttggggt cggagtcctc ccatggccca
     1381 gatcgaccgc ctgctcgccc acgtcatctc gaaagccggc agccgcctgg aactcaaagc
     1441 agacaagaaa ccccgcctcg agctgaagaa cggcgaggcc ctggagctgc tgcccaatcc
     1501 cttgccggcg gtgatggtgg aggtgctggc gggcgatgtg gtgccacctc agctgaaggg
     1561 tgcctgggag aaggagggcc agacagagtt cgactacgac ttgtcgggcc agtgcttcca
     1621 catccgcctg agccggtatg cggacacacc gcagatccat gcggagcatg tgggtccgtc
     1681 caaggtggcc agccccccac cgccccccgc gcccctgacg gagatcaagg cgcccgcccc
     1741 ggcggcgcct ccggcgtcga ccccggcccc cggtgccacg gcccctg
//
LOCUS       DATGWW010000381         2919 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_28691, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000381 DATGWW010000000
VERSION     DATGWW010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2919
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28691"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(101..1630)
                     /locus_tag="VK150_05505"
     CDS             complement(101..1630)
                     /locus_tag="VK150_05505"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HLP30796.1"
                     /translation="MTRLPIFPALLVAFSLVGQEAPKADGTQPVLKLTLQSAIETSLK
                     NNLQVQIAAETRDFTRAGYTIEQGTFDWNLTSSLSLSKTQDATRGQNFPGGPLTTSES
                     TTFSRNLTVGSTKAFGWGGNLSLNYAPTYRFSKGTVNGGPESPFTTNPYDGSFTATYT
                     QSLLKNFGRDVTESRLIVARKSAEAADLGFQKAIIDLVASTETLYWDVVFAQRNLENK
                     QQALSLAQKQLKENQIRVQVGTLAPIEVTSSEASVAQREQDIIAAEAQLLNAKDALIR
                     ALYPSTERPAGLEPADAPSVKPLDMNESAAEKQALANRIELKSARLDLESKQVLETAA
                     GNRTLPQLDAFASYNGNAASQIPSEGLTAVNKDLTKGAYPGYTVGLQFAMPIQNRAAK
                     GLKAQARANRRQSELSLRDLELGITLEVRQAFRNVDASTKGVAAAEKTRIFREKDLEA
                     EQKKFENGMSTNFLVLSKQNDLDTAKSSELQSQITYAKAVTALEKALGHLLEARKLEV
                     K"
     gene            complement(1778..>2919)
                     /locus_tag="VK150_05510"
     CDS             complement(1778..>2919)
                     /locus_tag="VK150_05510"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLP30797.1"
                     /translation="MFPQFTEDQSAIREAARDFAMAEIDPGAAARDASGEFPKAILKQ
                     LGEMGFLGMTVPEAYGGAGVDFLSYILALEQVAYADASVAVTMSVNNSVACAPILAFG
                     TEAQKQKYLKPLASGELLGGFMLTEPDAGSDAAALKTRATKADGGWKLNGAKAWITNG
                     GVGRYFVTMARTDPDKGKKGISAFILDADQPGVVMGRPEEKMGLRSSKTVMVALEDAF
                     VPEDAMLGKPGDGLKVAFGGLDGGRIGIAAQALGIAQRAMDESVAYAKARISFGKPIG
                     EHQMIQTYLAEMEARLQASRLLVYRAAALKEAGKTCTVEAATAKLFTTESAVWLCDRA
                     VQIHGGYGYSREYLVERLYRDVRVTTIYEGTSEIQRMVIARELLK"
BASE COUNT          405 a          886 c         1080 g          548 t
ORIGIN      
        1 aggcgaagcc tgaagcccct gcgggctcca ccgccgagcg gcggaggtaa cgaaaaaccg
       61 ggccccaatt cggggcccgg tttttcgcag gggaatggaa ctacttgacc tcgagcttgc
      121 gggcctcgag caggtggccc agcgccttct ccagggcggt gacggccttg gcgtaggtga
      181 tctgggactg cagctcgctg ctcttggcgg tgtccaggtc gttctgcttg gagagcacga
      241 ggaagttcgt gctcatgccg ttctcgaact tcttctgctc ggcctcgagg tccttctcgc
      301 ggaagatgcg ggtcttctcg gcggcggcca cgcccttggt ggaggcgtcc acgttgcgga
      361 aggcctggcg gacctccagg gtgatgccca gctccaggtc gcgcagcgag agctcgctct
      421 ggcggcggtt ggcgcgggcc tgggccttga ggcccttggc ggcgcggttc tggatgggca
      481 tggcgaactg gagcccgacg gtgtagccgg ggtaggcgcc cttggtcagg tccttgttca
      541 cggccgtgag gccctcggag gggatctggg aggccgcgtt gccgttgtag ctggcgaagg
      601 cgtcgagctg gggcagggtg cggttgccgg cggcggtctc gaggacctgc ttcgattcca
      661 ggtccaggcg ggcgctcttc agctcgatgc ggttggccag ggcctgcttc tccgcggcgg
      721 actcgttcat gtcgaggggc ttgacgctgg gggcgtccgc cggctcaagg cccgcaggac
      781 gctccgtgga ggggtagagg gcgcggatga gggcgtcctt cgcgttcagg agctgcgctt
      841 cggcggcgat gatgtcctgc tcgcgctggg ccacggaggc ctcggaggag gtcacctcga
      901 tgggggccag ggtgcccacc tgcacgcgga tctggttctc cttgagctgc ttctgggcca
      961 gggacagcgc ctgctgcttg ttctcgaggt tgcgctgggc gaagaccacg tcccagtaga
     1021 gggtctcggt gctggccacc aggtcgatga tggccttctg gaagcccagg tccgcggcct
     1081 cggcgctctt ccgggccacg atgagccggc tctcggtgac atcgcggccg aagttcttca
     1141 gcaggctctg ggtgtaggtg gcggtgaagc tgccgtcata ggggttggtg gtgaaggggg
     1201 actcggggcc gccgttcaca gtgcccttgc tgaagcggta ggtgggggcg tagttcaggc
     1261 tcaggttgcc gccccagccg aaggccttgg tggagcccac cgtcaggttc cggctgaagg
     1321 tcgtggattc ggaggtggtg agcgggccgc cggggaagtt ctggccgcgg gtggcatcct
     1381 gggtcttgct caggctcagg ctgctggtca ggttccagtc gaaggtgccc tgctcgatgg
     1441 tgtagccggc ccgggtgaag tcccgggtct cggcggcgat ctgcacctgc aggttgttct
     1501 tcagcgaggt ctcgatggcc gactggaggg tcagcttgag caccggctgg gttccatcgg
     1561 ccttgggagc ttcctggccc accagggaga aggccacgag cagggccggg aagatcggga
     1621 gacgcgtcat caccactcct tgaagatcga aaagagccgc cacggggaca gggtgcctac
     1681 gggtggagcc gggtcaaggt ttagaccgcg gttcaaagca gcatggctcc ctcgtatgat
     1741 gagggcaagt ggtatttcat cgagcgttga aaagggttta tttcagcagt tcccgggcga
     1801 tgaccatgcg ctggatctcg ctggtgccct cgtagatggt ggtcacacgc acgtcgcggt
     1861 agagccgttc caccaggtat tcccgagaat agccgtagcc gccgtggatc tgcacggcgc
     1921 ggtcgcagag ccagacggcg ctctcggtgg tgaagagctt ggcggtggcg gcctccacgg
     1981 tgcaggtctt cccggcctct ttcagggccg cggcccggta gacgagcagg cgggaggcct
     2041 ggagccgggc ctccatctcg gccaggtagg tctggatcat ctggtgctcg ccgatgggct
     2101 tgccaaagga aatccgggcc ttggcgtagg ccacgctctc gtccatggcc cgctgggcga
     2161 tgccgagggc ctgggcggcg atgccgatcc ggccgccatc cagcccgccg aaggccacct
     2221 tcaggccgtc cccgggcttg cccagcatgg cgtcctcggg gacgaaggca tcttcgagcg
     2281 ccaccatgac ggtcttgctg gagcgcaggc ccatcttctc ctcggggcgg cccatgacca
     2341 cgccgggctg gtccgcgtcg aggatgaagg cgctgatgcc cttcttgccc ttgtcgggat
     2401 cggtgcgcgc catggtgacg aagtagcgtc ccacgccgcc gttggtgatc caggccttcg
     2461 cgccgttcag cttccagccg ccgtctgcct tggtggcccg ggtcttcagc gccgcggcgt
     2521 cggagcccgc gtcgggctcg gtgagcatga acccgcccag cagctcgccg ctggccaggg
     2581 gcttcaggta cttctgcttc tgggcttccg ttccgaaggc caggatgggc gcgcaggcca
     2641 cggagttgtt cacgctcatg gtcacggcca cggaggcgtc cgcgtaggcg acctgctcga
     2701 gggccaggat gtagctgagg aagtccacac cggcgccgcc gtaggcctcg ggcacggtca
     2761 tgcccaggaa gcccatctcg cccagctgct tcaggatcgc cttggggaat tcgccgctgg
     2821 catcccgcgc ggcggccccc ggatcgatct cggccatggc gaaatcgcgg gcggcctcgc
     2881 ggatcgcgga ctggtcctca gtgaactggg ggaacatgg
//
LOCUS       DATGWW010000382         1812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_302710, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000382 DATGWW010000000
VERSION     DATGWW010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_302710"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..545)
                     /locus_tag="VK150_05515"
     CDS             complement(<1..545)
                     /locus_tag="VK150_05515"
                     /inference="COORDINATES: protein motif:HMM:NF012981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HLP30798.1"
                     /translation="MPHASKLPILFNPASGMARKDPDALLRPLPKELRDRVEPIPFGP
                     PWDFEPHIAAAARLGGPLFVWGGDGTLHHAARALQACGGPVALAAIPGGSGNGLVRGL
                     RTPLEAAGALRRLMEGRELRMDLPRLDGVPFLNLCGTGFEAAVAHRFDAMPGRGFSTY
                     LRACWQLWRTWPEASLTWDAET"
     gene            795..>1812
                     /locus_tag="VK150_05520"
     CDS             795..>1812
                     /locus_tag="VK150_05520"
                     /inference="COORDINATES: protein motif:HMM:NF025264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunoglobulin domain-containing protein"
                     /protein_id="HLP30799.1"
                     /translation="MRFLSRASSALTQLAVLAALAISTACGGGGGGGGSTPPPPAPSI
                     SAQPSNQTVLEGATATFTATATGTGPLSYQWKKGGTPIAGATSTSYTTPAVALADSGS
                     SFTLAVSNAGGTVTSNAATLTVNPAPAIASFTATPGVVTLGGSATLAFTFSGGTGSVN
                     QGLGAVTSGATLTVTPAATTTYVLTVDNGAGTSVTASATVTVAPPPQVPAITAPVIAT
                     AGAAGFTASVAPQAGMTYAWSITGGTITAGAATPQITFTAGAAGTLTLTCAVSNAALT
                     TAVGTTTVDVAAAPQATSLTASSTTPLYGATVTLTPTFSGGTGVVDHGIGTVTSGTAY
                     PTPTL"
BASE COUNT          287 a          692 c          613 g          220 t
ORIGIN      
        1 gtctccgcat cccaggtcag gctggcttcg ggccaggtgc gccacagctg ccagcaggcg
       61 cgcaggtagg tgctgaagcc ccggccgggc atggcgtcga agcggtgggc caccgcagcc
      121 tcgaagccgg tgccgcagag gttcaggaag gggactccgt cgagccgggg caggtccatg
      181 cgcagttccc gtccctccat cagccggcgc agggccccgg cggcctccag gggggtgcgc
      241 aggccgcgca ccaggccgtt gccgctgccg ccggggatgg ccgccagggc cacggggccg
      301 ccgcaggcct ggagggcccg ggccgcgtgg tggagggtgc cgtccccgcc ccagacgaac
      361 agggggccgc ccaggcgcgc ggcggcggcg atgtggggct cgaaatccca gggcgggccg
      421 aagggaatgg gttccacccg gtcccgcagc tccttcggaa gcggccggag cagggcgtcc
      481 gggtcctttc gggccatccc cgaggcgggg ttgaagagga tggggagctt ggacgcgtgc
      541 ggcatggaag ggtggctccc cggtcgtggg tgaaggggcc gcgccccggc tgggcggacg
      601 gctccgacta agtaagccac gaattcacac ggtgatgcca aaccccactt ggacgtcatc
      661 tcaatttgcg catttgtcag cagaggctgg tgatcaaaaa ggaaaaaacg actaatatga
      721 tcgatagata atcttttaag caatggcatc cactcccgtc ctggtcggat ggatccgtgt
      781 ccctggaggc gcccatgagg ttcctgagcc gtgcgtcaag cgcgttgacc cagctggcgg
      841 tactggccgc cctggccatc tccacggctt gcggaggcgg cggcgggggg ggcggcagca
      901 cgcccccgcc cccggcacca tccatcagcg cccagccctc gaatcagacg gtgctcgagg
      961 gcgccacggc caccttcacg gcgaccgcca ccggcaccgg cccgctcagc taccaatgga
     1021 agaagggcgg cacgcccatc gccggcgcca cctcgaccag ctacaccacc cccgccgtcg
     1081 ccctggcgga cagcggatcg agcttcaccc tcgccgtgag caacgcgggc gggacggtga
     1141 cgagcaacgc ggcgaccctc accgtgaatc ccgcgccggc catcgccagc ttcacggcca
     1201 cacccggcgt cgtcaccctg ggcgggagcg ccacgctggc cttcaccttc agcgggggca
     1261 cggggagcgt gaaccagggg ctcggcgccg tgaccagcgg ggccaccctc accgtcacgc
     1321 ccgccgccac cacgacctac gtgctgaccg tggacaacgg cgccggcacc tccgtcacag
     1381 cctccgccac ggtgaccgtc gcgccacctc cccaggtgcc cgccatcacc gccccggtca
     1441 tcgccaccgc cggcgcggcc gggttcaccg cctccgtcgc accccaggcc gggatgacct
     1501 acgcctggag catcacgggc ggaaccatca ccgccggcgc cgccacgccg cagatcacct
     1561 tcaccgccgg cgccgcgggc accctgaccc tcacctgcgc cgtcagcaac gcggccctca
     1621 ccaccgccgt gggaaccacc accgtggacg tggcggcggc gccccaggcg accagcctga
     1681 cggccagcag caccacgccg ctctacggcg cgaccgtgac cctcaccccg accttctcgg
     1741 gcggcacggg cgtggtggac catggcatcg gcaccgtgac cagcggcacg gcctatccca
     1801 cgcccaccct cc
//
LOCUS       DATGWW010000383         1513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_377315, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000383 DATGWW010000000
VERSION     DATGWW010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377315"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1360
                     /locus_tag="VK150_05525"
     CDS             <1..1360
                     /locus_tag="VK150_05525"
                     /inference="COORDINATES: protein motif:HMM:NF017197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF748 domain-containing protein"
                     /protein_id="HLP30800.1"
                     /translation="RLAGMAVRTAPLTVAIKDMTWTDPEGRVVVQPDGSTNLAKALRL
                     APEGKPAAAPAAVLPATPAAAPDLTITRLSISGGRLSYIDRSVQPNAALVLSDLEGSY
                     LGLSSRPEAASKVDFRGKAGGLAPITITGHAMPLRSDLDTDVALKILGADLTDFTPYT
                     GKYLGYTVQKGKLGVDAHLRIERRNLKMENAVKLDQFYLGEKVPSPDATGLPVKLGLA
                     ILRDRKGLIAFDLPIEGSLDDPDVKYGKLVWKAIFGLLGKIATSPFTLIGKLFGGDAG
                     DLSSLAFTPGASALDPAALPKLQALAKALQERPELRLEAEGAVDADQDGAALRKAALE
                     ALLRRTRAQGLKTDEATPVPAPERERWLKAAFDAAFPAPKEAKEAKDAKPAPPPPPAE
                     MEQRLLSSLAVDPAALAQLADARGKVVIAWLLETGKGDPERLFLVRTGQAKGAAVAFT
                     LK"
BASE COUNT          238 a          566 c          520 g          189 t
ORIGIN      
        1 gcggctcgcc ggcatggcgg tgcgcaccgc gcccctgacc gtggccatca aggacatgac
       61 ctggacggat cccgagggcc gggtggtggt gcagcccgac ggcagcacca acctggcgaa
      121 ggccctgcgc ctggcgcccg agggcaagcc cgctgccgcg ccggctgccg tgctgccggc
      181 cacgcccgcc gccgcgccgg acctcaccat caccaggctg tccatcagtg gcgggcggct
      241 cagctacatc gaccgctccg tgcagcccaa tgcggccctg gtgctgagcg acctcgaggg
      301 cagctacctg gggctttcca gccggcccga ggccgcctcg aaggtggatt tccgcggcaa
      361 ggccggcggc ctcgcgccca tcaccatcac gggccacgcc atgcctctgc gcagcgacct
      421 ggacacggac gtggcgctga agatcctggg ggccgacctc acggacttca cgccctacac
      481 gggcaagtac ctgggctaca ccgtgcagaa gggcaagctc ggcgtggacg cccatctgcg
      541 catcgagcgg cggaacctga agatggagaa cgccgtgaag ctcgaccagt tctacctcgg
      601 cgagaaggtg ccaagccccg acgccacggg cctgcccgtg aagctgggcc tcgccatcct
      661 ccgcgaccgc aagggcctta tcgcctttga tctgcccatc gagggcagcc tcgacgatcc
      721 ggatgtgaaa tacgggaagc tcgtatggaa ggccatcttt gggctcctcg gcaagatcgc
      781 cacctcgccg ttcaccctga tcggcaagct cttcggcggc gacgcgggcg acctcagcag
      841 cctggccttc acgccgggcg ccagcgccct cgaccctgcc gccctgccca agctgcaggc
      901 cctggcgaaa gcgctgcagg agcggccgga actgcggctg gaggcggagg gcgcggtgga
      961 tgccgaccag gatggcgccg ccctgcgcaa ggccgccctg gaggccctcc tgcggcgtac
     1021 ccgagcccag ggcctgaaga ccgatgaggc cacacccgtg cccgcgccgg agcgggagcg
     1081 ctggctcaag gccgcctttg atgcggcctt cccggccccc aaggaggcca aggaagctaa
     1141 ggacgcgaag cccgcccccc cgccgccgcc cgcggagatg gaacagcggc tgctctccag
     1201 cctcgccgtg gatcccgcgg cgctggccca actggccgat gcccggggca aggtggtcat
     1261 cgcctggctg ctggagacgg gcaagggcga tcccgagcgc cttttcctgg tgcgcaccgg
     1321 ccaggccaag ggcgcggcgg tggccttcac cctcaaatag aacccgagga agccaaggtc
     1381 cgcccgacgg cgtccgccca ggcctccacc cccgccgcca ggtcggggat ccccgggccg
     1441 aagcggtcgg cccccagcca gtggagaccc ggcggcaggc tttcgatgag gcgcgcggcc
     1501 cgggcgctgt ggc
//
LOCUS       DATGWW010000384         1915 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_29064, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000384 DATGWW010000000
VERSION     DATGWW010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1915
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29064"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..819
                     /locus_tag="VK150_05530"
     CDS             <1..819
                     /locus_tag="VK150_05530"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HLP30801.1"
                     /translation="RVELADALAKLAESQQKQGVGTKLDTLRSQVQLQTERQRLIQAQ
                     TQRTTALAGLGRALDLEPGTRIELTDTLAAPAMPGAGFQETFQAGLSQRPEFAVLDAR
                     EKAAASLREAAQGLRLPALVATGAYGSTGLQSLPSTTTYQVSVGLKVPLFTGGLVSAQ
                     VARARSEESRVQEARRDVKAQVGYEIQVARAELDAAVHEVEVANLAVSLSTEALTQAR
                     HRFEAGVSNNIEVINAQDELARANDNQISALYRLNQSRADLAHATGQLEAFFAR"
     gene            831..>1915
                     /locus_tag="VK150_05535"
     CDS             831..>1915
                     /locus_tag="VK150_05535"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HLP30802.1"
                     /translation="MSQDASEQPTPSPSGAAEAGMSKAIRALVIGAPVLLLLAGGMWL
                     YSRNRVSTDDAQVDGHLVPVSCRVYGTVEKVLVEDNQAVKAGDTLALVDPRDIQARLD
                     QSKGSLAQAQAQAEGAKAEVARALAAYQQARSSDIETARANLGAKKASLDKARTDLQR
                     MRPLAEREEISALQFDGFRTQAEVAESEWRAAEARVASMLREADIRKSAVGAAEARLA
                     SARAQVEQARASQEGLDLQLGYTRIVAPVDGVVTRKLVEAGQTIQPGQGLLTLIPLHR
                     TWVTANFKETQLARMKPGQEAEIKVDMNSMVLKGRVDSIAGSTGSRMSLLPPENAVGN
                     FVKVVQRIPVKIRIDEAEAQKVILRPG"
BASE COUNT          326 a          708 c          644 g          237 t
ORIGIN      
        1 cgggtggaat tggcggatgc cctggcgaaa ctggcggaga gccagcagaa gcagggcgtg
       61 ggcaccaaac tcgatacgct ccggtcccag gtgcagctgc agaccgagcg ccagcggctc
      121 atccaggccc agacccagcg caccacggcc ctggcgggcc tgggccgggc cctggatctg
      181 gaaccgggca cccgcattga actgaccgac accctcgcgg caccggccat gcctggggcg
      241 ggcttccagg agaccttcca ggccggcctg tcccagcgac ccgagttcgc agtgctggac
      301 gcccgcgaga aggccgccgc cagcctgcgc gaagccgccc agggcctgcg cctgcccgcc
      361 ctcgtggcca cgggggccta cggctccacg ggcctgcaat ccctgccttc caccaccacg
      421 taccaagtct cggtgggcct caaagtaccg ctcttcaccg gcggccttgt gtccgcccag
      481 gtggcccgcg cccgctccga agagagccgg gtgcaggagg cccgccgcga cgtgaaggcc
      541 caggtgggct acgagatcca ggtcgcccgg gcggaactcg acgccgccgt ccacgaggtg
      601 gaggtggcca acctcgccgt gtccctctcc accgaggccc tcacccaggc ccgccaccgc
      661 ttcgaggccg gcgtgagcaa caacatcgaa gtgatcaacg cccaggacga gctcgcccgc
      721 gccaacgaca accagatcag cgccctctac cggctgaacc agtcccgcgc ggacctggcc
      781 cacgccaccg ggcagctcga agcattcttc gcccgctgat ggagaccccg atgagtcaag
      841 acgcatccga acagcccacg ccctccccct ccggcgccgc cgaggcgggc atgtccaagg
      901 ccatccgcgc cctcgtgatc ggcgcgcccg tcctgctgct cctggcgggc ggcatgtggc
      961 tctactcccg caaccgcgtc agcaccgacg atgcccaggt ggatggccac ctggtgcccg
     1021 tgtcctgccg ggtctacggc acggtggaga aggtgctggt ggaggacaac caggccgtga
     1081 aggccggcga caccctggcc ctggtggatc cccgggacat ccaggcgcgc ctcgaccagt
     1141 cgaagggctc cctggcccag gcccaggccc aggccgaggg ggcgaaggcc gaggtggcac
     1201 gcgcactggc ggcctaccag caggcccgca gctccgacat cgagactgcc cgggccaacc
     1261 tgggcgcgaa gaaggccagc ctggacaagg ccaggaccga ccttcagcgc atgaggccgc
     1321 tggcggaacg cgaggagatc tcggccctgc agttcgacgg cttccgcacc caggccgagg
     1381 tggccgaaag cgagtggcgt gccgccgagg cgcgcgtggc ttcgatgctg cgcgaggccg
     1441 atatccggaa gtcggccgtg ggggcggccg aggcgcgcct ggcctccgcc agggcccagg
     1501 tggaacaggc ccgcgccagc caggaggggc ttgacctcca gctggggtac acgcgcattg
     1561 tggcccccgt ggacggggtg gtgacccgca agctcgtcga agccggccag accatccagc
     1621 cgggccaggg cctgctcacg ctcatccccc tgcatcgcac ctgggtgacc gccaatttca
     1681 aggaaaccca gctcgcccgc atgaagcctg gccaggaggc cgagatcaag gtggacatga
     1741 acagcatggt gctcaagggc cgcgtggatt ccatcgccgg ctccaccggc tcgcgcatga
     1801 gcctgctgcc tcccgagaac gccgtgggca acttcgtcaa ggtggtgcag cgcatccccg
     1861 tgaagatccg catcgacgag gcggaagccc agaaggtcat cctgcgcccc ggcat
//
LOCUS       DATGWW010000385         2695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_75872, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000385 DATGWW010000000
VERSION     DATGWW010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2695
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75872"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VK150_05540"
     CDS             complement(<1..392)
                     /locus_tag="VK150_05540"
                     /inference="COORDINATES: protein motif:HMM:NF014007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000041 - transition metal ion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HLP30803.1"
                     /translation="MHIPDGYLSPSTCAVAFAATLPFWVVAFRRMGRLLHTRMVPLLA
                     LFSAFSFVIMMFNIPLPGGTTGHAVGVAVAAIVLGPWGSMVAISVALLIQALFFGDGG
                     LTTFGANSFNMAVVGSMVAWVAYTVIAGR"
     gene            complement(444..1124)
                     /locus_tag="VK150_05545"
     CDS             complement(444..1124)
                     /locus_tag="VK150_05545"
                     /inference="COORDINATES: protein motif:HMM:NF024778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HLP30804.1"
                     /translation="MPVEISLLAAFLVGLSGGVHCVGMCGGIVGALSFGTPESVRGSP
                     WRFLPWLFAYNGGRLLSYTVAGAVMGALGLMAANLIALHEAQRVLLVVAGLFMVALGL
                     YLGGWWMGLTRVEHAGAGIWRRLEPLGRRFVPVRSPGHAFALGLVWGWLPCGLVYTAL
                     IWALSAGGPLQGALLLLAFGLGTLPNLLAMGLVAGRVASFTRHPAVRAGAGLLVILFG
                     GLTLWRAW"
     gene            1200..2501
                     /locus_tag="VK150_05550"
     CDS             1200..2501
                     /locus_tag="VK150_05550"
                     /inference="COORDINATES: protein motif:HMM:TIGR00901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmpG family muropeptide MFS transporter"
                     /protein_id="HLP30805.1"
                     /translation="MNDSPRPSPPPPTVWQQLFTRRMLICVFTGFTSGLPLFLLFNLI
                     PAWLRTEQVDLKTIGLFALIQFPYTWKFLWSPFLDRYAVPLLGRRRGWMLLTQLGLLA
                     TIAGMGTFSPAADLTTIAWIATLLAVLSATQDIALDAYRRELLNDAELGLGNAIHVNA
                     YRIAGLVPGSLSLILADLLPWDMVFAITALFMLPGVAMTLMVSEPHRASPPKTLREAV
                     VEPFHEFITRKGWNSALLVLAFLLFYKLGDSMCTALATPFYIDMGFSKTDIGLIAKNA
                     GLWPSIIGGMLGGLWMVRIGINRALWLFGVVQVVSIFGFAWLASFGHHDQIGTLERTQ
                     LALVIGLEALGVGLGTVAFVAFIARTTHPAYTATQFALFTSLMAIPRTFANAATGWLV
                     ESMGWMNFFLLCALLAIPGMLLLFKVAPWHEPPREPAVEQP"
BASE COUNT          469 a          981 c          857 g          388 t
ORIGIN      
        1 cgccccgcga tgaccgtata ggcgacccag gcgaccatcg aaccgaccac cgccatgttg
       61 aagctgttgg cgccgaaggt ggtaagcccc ccgtcgccga agaagagggc ctggatcagc
      121 agcgccaccg aaatcgccac catggaaccc cagggcccga ggacgatggc cgccacggcc
      181 acccccacgg catggcccgt ggtcccgccc gggaggggaa tgttgaacat catgatcacg
      241 aagctgaagg cggaaaagag cgccagcagc ggcaccatgc gggtgtggag cagccgtccc
      301 atgcgccgga aggcgacgac ccagaagggc agcgtggccg caaaggcgac ggcacaggtg
      361 gaggggctca ggtaaccgtc aggtatatgc atcaggcagg ttcgagggac gaggttcgag
      421 ggagagcata cgggaaacga cccttaccac gctcgccaga gggtgagccc cccgaacagg
      481 atcaccagaa ggccggcacc ggcccgcacc gcgggatggc gggtgaagct ggcgacccgt
      541 ccggcgacca gccccatggc gaggaggttg ggcagggtgc cgaggccgaa ggcgaggagc
      601 agcagggccc cctgaagggg cccgcccgcc gaaagggccc agatgagggc ggtgtagacc
      661 aggccgcaag ggagccagcc ccagaccagg ccgagcgcaa aggcgtggcc gggggagcgg
      721 accgggacga aacgacggcc gaggggttcc agccggcgcc agatcccggc accggcgtgc
      781 tcgacccggg tcagccccat ccaccagccc cccaggtaga ggccgagggc gaccatgaag
      841 aggcccgcca ccaccagcag cacccgctgc gcctcgtgca gggcgatgag attggcggcc
      901 atgaggccga gggcgcccat gacggcgccg gccaccgtgt agctcaggag ccgcccgccg
      961 ttgtaggcaa aaagccaggg gagaaagcgc caggggctcc cgcgcaccga ctccggggtg
     1021 ccgaagctga gggcaccgac gatgccgccg cacatgccca cacaatggac cccgccggag
     1081 agtccgacga ggaaggcggc cagcaacgag atttccacag gcatgaacgg ctaccggatg
     1141 gctgatggaa cgagcgtgta tgatagccgc cgacctgttg ccggcccatc cgaaaaatcg
     1201 tgaacgattc cccgcgcccg agcccgccgc ccccgaccgt ctggcaacag ctcttcacgc
     1261 gacgcatgct catctgcgtc ttcaccggct tcacctccgg cctgcccctg ttcctgctct
     1321 tcaacctgat ccccgcctgg ctgcgcaccg agcaggtgga cctgaagacc atcggcctgt
     1381 tcgccctgat ccagtttccc tacacctgga aatttctctg gtcgcccttc ctggatcgct
     1441 acgccgtgcc gttgcttggg cgccgccgcg gctggatgct gctgacccag ctcggcctgc
     1501 tggccaccat cgccggcatg gggacctttt cccccgccgc cgacctcacc accatcgcct
     1561 ggatcgccac cctgctggcc gtgctcagtg ccacccagga catcgccctc gacgcctacc
     1621 gccgtgaatt gctgaacgac gccgaactgg gcctcggcaa cgccatccac gtgaacgcct
     1681 accgcatcgc cggtctggtc cccggttccc tctcgctgat cctggcggac ctgctgccgt
     1741 gggacatggt gttcgccatc accgcgctct tcatgctgcc gggcgtcgcc atgacgttga
     1801 tggtgagcga accccaccgc gcctcgccgc ccaagaccct gcgcgaggcg gtggtggagc
     1861 cgttccacga attcattacg cgcaaggggt ggaacagcgc gttgctggtg ctcgccttcc
     1921 tgctcttcta caaactgggg gacagcatgt gcacagcgct ggcgacgccg ttctacatcg
     1981 acatgggttt ctccaagacc gacatcggcc tcatcgccaa gaacgcgggg ctctggccct
     2041 ccatcatcgg cggcatgctg ggcggcctgt ggatggtgcg catcggcatc aaccgcgccc
     2101 tgtggctctt cggcgtggtg caggtggttt cgatcttcgg cttcgcctgg ctcgcctcct
     2161 tcggccacca cgatcagatc ggcacgctcg aacgcaccca actggcgctg gtgatcggcc
     2221 tggaggcgct cggcgtgggc ctcggcacgg tggccttcgt cgccttcatc gcgcgtacca
     2281 cccatcccgc ctacaccgcc acccagttcg ccctcttcac cagcctgatg gccatcccgc
     2341 gcaccttcgc caacgccgcc accggctggc tggtggagtc catgggctgg atgaacttct
     2401 tcctgctctg cgcgctgctc gccatccccg gcatgctgct gctcttcaag gtggcaccgt
     2461 ggcacgagcc gccgcgcgag cccgccgtcg aacagccctg aacgacgcgg agtgatgcgc
     2521 gcgcccgcga ccatcagcac cgggtagcac gccccgtcgc ctacactcat gggtgccccg
     2581 gtcaccgcgg aaccacccat ggacccactg gcacgcctgg gcgcccggct cggcgccgcc
     2641 ctctcgggcg ccggcaccga agccgatcgc ctgctcctgc tccacaccgc caacg
//
LOCUS       DATGWW010000386         2118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_75898, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000386 DATGWW010000000
VERSION     DATGWW010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75898"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..1363)
                     /locus_tag="VK150_05555"
     CDS             complement(29..1363)
                     /locus_tag="VK150_05555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase domain-containing protein"
                     /protein_id="HLP30806.1"
                     /translation="MVFFNHATRQMTAKIVYYGPGLCGKTTNLNTIYGKTSQKARGEM
                     VSLNTETDRTLFFDLLPMDVGMVGGFKTKLQLYTVPGQVFYNSTRKLVLKGVDGIVFV
                     VDSQTPMLDPCRESYQNLEENLRELGLNLSEIPTVFQWNKRDLRNVVPVEELEAAFNP
                     RGLPSFQSVASDGTGVFETLRGITKLALSHIKTHVLGEAQVAAPPVEPREVPRQEIEA
                     LTLSDLPSVTDLLDMEGATSASSSPAAAPLPDEGDDTDFFIEAPVLPEPPEAGDGDIS
                     FLTDMDDLPPAASETIELPPLPEPAAVEVMPMPEAVPAPVVPPVAAPAVHESEPAAAG
                     PSRPAKTGAKVDPLAALASLKLEAKRPAAKPKAVDAKDAIHSLMGELTQVGRSGAPSV
                     LRLEVPAELDGQEIEVVVQLRRQGQVLAEGQIQRPAPSKGSTAKLSVELKRS"
     gene            complement(1444..1932)
                     /locus_tag="VK150_05560"
     CDS             complement(1444..1932)
                     /locus_tag="VK150_05560"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HLP30807.1"
                     /translation="MGIFAMLGLASAAEVTEGSKAPAFEALDQHGAQVRLQDFQGKAA
                     VVLYFYPKDDTPGCTAQACSLRDGFAAIQAAGAVILGVSADTGASHRAFAEKFKLPFS
                     LLADPEKRIIAAYGVKMPLLGFAKRVTFLIDRQGVVRKVIRDTRTQDHDRQVLALLKG
                     MS"
BASE COUNT          327 a          689 c          733 g          369 t
ORIGIN      
        1 cagcagggcc aggatcaggc cacgcatcct agctccgctt cagttcgacg ctgagcttgg
       61 ccgtgctgcc cttgctgggt gcggggcgct ggatctgtcc ctccgccagc acctgcccct
      121 ggcgccgcag ctggaccacc acctcgatct cctgcccgtc cagctcggcg ggcacctcca
      181 ggcgcagcac cgagggcgcc ccggagcggc ccacctgggt gagctcgccc atgagggaat
      241 ggatggcgtc cttggcgtcc acggccttgg gtttagcggc gggccgcttg gcttccagct
      301 tcagtgaggc cagggccgcc aggggatcga ccttggcgcc agtcttcgct ggccgcgaag
      361 ggcccgcagc ggcgggttcc gattcgtgaa ccgcgggtgc cgccacgggg gggaccacgg
      421 gcgcaggcac ggcctccggc atgggcatga cttccaccgc cgcaggctcc ggcagcggcg
      481 gcagctcgat ggtctctgag gccgcagggg gcagatcatc catgtcggtc aggaaggaaa
      541 tgtctccatc gccggcctcg ggcggctcgg gcagcaccgg ggcctcgatg aagaaatccg
      601 tgtcgtcgcc ttcatcgggc aggggcgcag cggccgggga ggaactggcg gacgtggcgc
      661 cttccatgtc gaggaggtcg gtcaccgagg gcaggtcgga cagcgtgagg gcctcgatct
      721 cctgccgtgg aacctccctg ggttctaccg ggggcgcggc cacctgggcc tcgcccagca
      781 cgtgggtctt gatgtgggag agggccagct tggtgatgcc gcggagggtc tcgaagaccc
      841 cggtgccgtc cgacgccacg gactggaagc tgggaaggcc ccggggattg aaggcggctt
      901 caagctcctc gacgggcacg acattgcgga ggtcccgctt gttccactgg aagaccgtgg
      961 ggatctcaga gaggttcagc cccagttccc ggaggttctc ctccaggttc tggtagctct
     1021 cacggcaggg atcgagcatg ggcgtctggc tgtccaccac gaagacgatg ccgtccacgc
     1081 ccttcagcac gagctttcgc gtgctgttgt agaacacctg gcccggcacg gtgtagagct
     1141 gcagcttggt cttgaagccg cccaccatgc ccacgtccat gggcagcagg tcgaaaaaca
     1201 gggtgcggtc cgtctcggtg ttgaggctca ccatctcgcc gcgggccttc tggctcgtct
     1261 tgccgtagat ggtgttgagg ttggtggtct ttccgcacag accgggcccg tagtagacga
     1321 ttttcgccgt catctgccgg gtggcgtggt tgaagaacac cattccagaa cctctttgga
     1381 tgagcgagtt tagcccagaa actctcccgg cctcaatgca aatgcctgaa ttccggccct
     1441 cggctaggac attcccttca ggagggcgag cacctgccgg tcgtgatcct gggttcgggt
     1501 gtctcggatg acctttcgga cgacgccctg gcgatcaatg aggaacgtga cccgcttggc
     1561 gaatccgagc agtggcatct tcacgccgta cgcggcgatg atgcgcttct ccgggtcggc
     1621 caggaggctg aagggcagct tgaacttctc ggcgaaggcc cgatggctcg cgccggtgtc
     1681 ggcgctcacg ccgaggatca ccgcgccggc ggcctggatg gccgcgaagc catcccgcag
     1741 gctgcaggcc tgggccgtgc accccggcgt gtcgtccttg ggatagaagt agagcaccac
     1801 ggccgccttg ccctggaaat cctgcagccg cacctgggct ccgtgctggt cgagcgcctc
     1861 gaaggccggg gctttcgagc cttcggtgac ctccgcggcc gacgccaacc ccagcatcgc
     1921 gaaaatcccc atggtcatcc tccccgcccg tgccatgcgg cccccagaac tggagggagt
     1981 gtggcaccat cgcctgatcc aggaggggga agagtttgga caacccggtt cgcatcgccc
     2041 tcatgcccgg cgacggagtc ggcggggaag tcctgaggga agccctgccc tgcctggact
     2101 gggcaaggtc gcggggcc
//
LOCUS       DATGWW010000387         2277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_29177, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000387 DATGWW010000000
VERSION     DATGWW010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29177"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..644
                     /locus_tag="VK150_05565"
     CDS             <1..644
                     /locus_tag="VK150_05565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30808.1"
                     /translation="MWLPVAILAGLAVVGGFLNYPESLHRVFPIVPAELFSKWIEPLL
                     YQVAPVHHGEHVPPAIEYGLMAWATLIWAPGAMLLAWVIYKKDPSWSRAKAFVARFPN
                     LYRWVNAKYYVDEFYEWALINPIKRFSAQLWSFDTWVVDGMVNGAARVTIIWADLMHW
                     ADEYLVDGAVDLTEYIVHETSQVFRGLQSGRVQHYAFVMFIGFLVFAFWKFLV"
     gene            679..>2277
                     /locus_tag="VK150_05570"
     CDS             679..>2277
                     /locus_tag="VK150_05570"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HLP30809.1"
                     /translation="MFTANTTLMLVATFLPVLGALVLLLVPKDQRRVFEIGSLLVMIA
                     SFLVSVLFWFGYDRASDAVQWAAAWNWIPSLGVKFSVGMDGISLVLWLLTTFIGPIAI
                     ACSFKSIETRHKEYYIWMLVLQTAMLGVFITQDMFLFYLFWEVMLVPMYFLIAIWGGP
                     QKLYAAIKLFLYTLAGSVLMLVAILAIYFLQHKATGSYDFSLASFQAMAPVIAQQSKN
                     YQYLMALAFFIGFAIKVPMFPFHTWLPDAHVQAPTAGSVILAAILLKMGTYGFVRFLL
                     PILPGATKDLMPWFIALALIGIIYGALVAMIQKDMKKLVAYSSVSHLGLCMLGLFALN
                     PYGIKGGMLQMINHGISTSGLFLAVGIVYERRHTRMIADFGGLSKSMPVYATIFMIMT
                     MSSLGLPLLNGFIGEGVILMGAFQAFPWAAVVATLGIILGAAYLLWMYQRVMFGPITA
                     VNEKMDDLDLREVLYFAPLVIVAFWIGMYPKPVMAVMDAPVRKLVEQITPGFHAAEAL
                     AAKQAAAAKLGMQGMTAPAAHHEAA"
BASE COUNT          345 a          814 c          656 g          462 t
ORIGIN      
        1 gcatgtggct cccggtggcc attctggccg gcctggcggt ggtcgggggc ttcctgaact
       61 accccgaaag cctgcaccgc gtgttcccca tcgttcccgc cgagctcttc tccaagtgga
      121 tcgagccgct gctctaccag gtggccccag tgcaccacgg cgagcacgtg cctcccgcca
      181 tcgagtacgg cctcatggcc tgggccaccc tgatctgggc ccctggcgcc atgctcctgg
      241 cctgggtgat ctacaagaag gatcccagct ggagtcgcgc caaggccttc gtggcgcgtt
      301 tcccgaacct ctaccgctgg gtcaacgcga agtactacgt ggacgagttc tacgagtggg
      361 ccctcatcaa ccccatcaag cgcttctccg cccagctctg gagcttcgac acctgggtgg
      421 tggacggcat ggtgaacggc gcggcccgcg tcacgatcat ctgggccgac ctcatgcact
      481 gggcggatga gtacctggtg gacggcgccg tcgacctcac cgagtacatc gtccacgaga
      541 cgagccaggt cttccggggc ctgcagagcg gccgggtgca gcactacgcc ttcgtgatgt
      601 tcatcggctt cctcgtcttc gccttctgga aattcctcgt ctagccttcc ctgcctggcc
      661 tcattggttg gagtccccat gttcaccgct aatacgacac tgatgctggt ggcgaccttc
      721 ctgcccgtac tgggcgcgct ggtcctgctt ctcgtgccca aggaccagcg ccgggttttc
      781 gagatcggct ccctgctggt gatgatcgcc agcttcctgg tgagcgtcct cttctggttc
      841 ggctacgacc gcgccagcga cgccgtccag tgggcggccg cctggaactg gatcccgtcc
      901 ctcggggtga agttcagcgt gggcatggat ggcatcagcc tcgtgctctg gctgctgacc
      961 accttcatcg gccccatcgc catcgcctgc tcgttcaagt ccatcgagac gcggcacaag
     1021 gagtactaca tctggatgct ggtgctccag acggccatgc tcggcgtgtt catcacccag
     1081 gacatgttcc tcttctacct gttctgggaa gtcatgctgg tgccgatgta cttcctgatc
     1141 gccatctggg gcggccccca gaagctctac gcggccatca agctcttcct ctacaccctg
     1201 gccggctcgg tgctgatgct ggtggcgatc ctggccatct acttcctgca gcacaaggcc
     1261 actggcagct acgacttctc cctggccagc ttccaggcca tggcccccgt gatcgcccag
     1321 cagtccaaga actaccagta cctgatggcc ctggccttct tcatcggctt cgccatcaag
     1381 gtgcccatgt tccccttcca cacctggctg cctgacgccc acgtgcaggc gcccaccgcc
     1441 ggctccgtga tcctggccgc catcctgctg aagatgggca cctacggctt cgtgcggttc
     1501 ctgctgccca tcctgcccgg cgccaccaag gacctcatgc cctggttcat cgccctggcg
     1561 ctcatcggca tcatctacgg cgccctggtg gccatgatcc agaaggacat gaagaagctg
     1621 gtggcctact cctcggtgag ccacctcggc ctctgcatgt tgggcctctt cgccctcaat
     1681 ccctacggca tcaagggcgg catgctccag atgatcaacc acggcatcag caccagcggg
     1741 ctcttcctcg cggtgggcat cgtctatgag cggcgccaca cgcgcatgat cgccgacttc
     1801 ggcgggctct cgaagagcat gccggtctac gccacgatct tcatgatcat gaccatgagc
     1861 agcctcggcc ttccgctcct caacgggttc atcggtgagg gcgtgatcct catgggcgcc
     1921 ttccaggcct tcccctgggc cgcggtggtc gccacccttg gcatcatcct cggcgccgcc
     1981 tacctgctgt ggatgtatca gcgggtcatg ttcggaccca tcaccgccgt gaacgagaag
     2041 atggacgacc tcgacctccg cgaggtgctc tacttcgccc ccctggtgat cgtggccttc
     2101 tggatcggca tgtatcccaa gccggtgatg gccgtcatgg acgccccggt gcgcaagctc
     2161 gtcgagcaga tcacccccgg cttccacgcc gccgaggccc tggccgccaa gcaggccgcc
     2221 gccgccaagc tgggcatgca gggcatgacc gccccggccg cccaccacga ggcggcc
//
LOCUS       DATGWW010000388         4113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_75933, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000388 DATGWW010000000
VERSION     DATGWW010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4113
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75933"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1538
                     /locus_tag="VK150_05575"
     CDS             <1..1538
                     /locus_tag="VK150_05575"
                     /inference="COORDINATES: protein motif:HMM:NF023281.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3373 family protein"
                     /protein_id="HLP30810.1"
                     /translation="IQWGGDLRTRFESSEWHFKPYTQFMGFAQSAGAPAGALPPGYPY
                     PFMPLTQSVPAQDWTNSVQWSTRLRLKMGITINEHAKIMGRLTMYKVHGGADVPTFNG
                     SPNTVQNSFNSAKVPGTDVLRVERASLVYDFPLGILSIGRQNTSDGPPFEVREGGERQ
                     ATPQALAVNALVDGIGFKFQLDKIGLPENTLLGICYGVGYESGFGGGGSIKSSAAPVG
                     FNFTNVNWTPQGPNAAAATMQVASIGPLKDSTVLGAMYDMPLLFQVGESVHSANLYVG
                     YNRFGNMTDIPFGSTNNFPVPAMPGMGGMPSIQYVTATNNLGDMDQWTLTWKHKVGDT
                     FTYFASYGHIKSKPNGKMSQYGAYWTMPPAMGGETVQLAGFGGLLGDAVNSQTASAYY
                     VGMRWDATEKFAFGAEFNHGSPRWFTYSPATGEATEKLGTRGDVWEGYIHWQFAKNAA
                     FRLGYLDYKYSHAFSGWHISPGPAMPGQSWEDAYDLNKNPMLQYGFPASVKTTYASIE
                     VKF"
     gene            1619..3790
                     /locus_tag="VK150_05580"
     CDS             1619..3790
                     /locus_tag="VK150_05580"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HLP30811.1"
                     /translation="MDRRFFLKAAGATAGAVATTQVGCLKYFKKGRTSSTDDREVPTT
                     CELCPNKCSAIAVVQGGFVKKLNPNPENPKSRDMLCARGNAAIKQVYDPDRLKQPMIR
                     VGARGEGKWKPVSWDEAFDFAAKKLADIKAKHGPEATLWSSTEGFQEVFFKNLGLAFG
                     SPNLVRHPTLCLASVNLAYSATFGTVPSFDLLNSKFVIMSGANRFESIITPDTMDLIG
                     GVMERKAKLVYLDPRFTVTASKADEWYPIKPGTDLAFILAMIHVIIKENRHSKDFVAA
                     YTTGFDQLAEHVKQYTPEWAEKETEIPAKDIVRIAREFSDAAPRALYYAGRRSSWYQN
                     DFQMRRAQAILNAIIGNWDQPGGMVPNAKLPKGEFLFMPWDEPKAPRVDEIDKHFPLA
                     AKGDGVYLKLRENVLTGKPYPIKGWMVYKQDPLNAMPDQAKTLKMIEGMDFIGVIDVQ
                     MSDMAWYADVVFPESAYLERTDPVEVMPGIWPAVVYRQQVVKPIHDTKPNLEIVQGLA
                     KRLGLADYFDYTIEQWVEAEFKELPIPMAAEHMKKHGVWAASGQPSYGKTLNPDHRFV
                     TKTGKIELFSERLQEAGQDPLPVYAAPVPPPSDRFRLILGRVGYFTHANQSNNVWLNE
                     FMKENDLWINPKPAERLGIRDGAYVSVTSSVGAVKLKARVTEEIRPDCVFMLHGFGKK
                     SKMQSLVYNVGASDAVILETAWDKVSGNAAFHETFVKVANA"
     gene            3803..>4113
                     /locus_tag="VK150_05585"
     CDS             3803..>4113
                     /locus_tag="VK150_05585"
                     /inference="COORDINATES: protein motif:HMM:NF024634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HLP30812.1"
                     /translation="MAIKKKRYALVIDSRKCINCKACVVACKAENEVPVGNFRNWINE
                     ERQGEYPKLRIDFEPEQCHHCEHPSCARVCPTGATWQRKDGIVLVNYDECIGCRYCMV
                     A"
BASE COUNT          823 a         1467 c         1201 g          622 t
ORIGIN      
        1 acatccagtg gggcggcgat ctccgcaccc gcttcgagag cagcgagtgg cacttcaagc
       61 cctacacgca attcatgggc ttcgcccaga gcgccggcgc ccccgctggt gcgctgcctc
      121 ccggctaccc ctaccccttc atgcccctca cccagagcgt gcctgcccag gactggacca
      181 actccgtgca gtggtccacc cgcctgcgtc tcaagatggg catcaccatc aatgagcacg
      241 ccaagatcat gggccgcctg acgatgtaca aggtgcacgg cggcgccgac gtacccacct
      301 tcaacggctc gcccaacacc gttcagaact ccttcaacag cgccaaggtt cccggcaccg
      361 acgtgctccg cgtcgagcgc gccagcctcg tctacgactt ccctctgggc atcctgtcca
      421 tcgggcgcca gaacacctcc gacggcccgc cgttcgaagt ccgcgaaggc ggcgagcgcc
      481 aggccacgcc ccaggccctg gccgtgaacg ccctggtgga cggcatcggc ttcaagttcc
      541 agctcgacaa gatcggcctc cccgagaaca ccctgctggg catctgctac ggcgtgggct
      601 acgagtccgg cttcggcggc ggcggcagca tcaagtccag tgccgctccc gtgggcttca
      661 acttcaccaa cgtgaactgg acgccccagg gccccaacgc cgcggcggcc accatgcagg
      721 tggcgagcat cggtcccctg aaggacagca cggtgctcgg cgccatgtac gacatgcccc
      781 tgctcttcca ggtcggcgag agcgtccaca gcgccaatct ctacgtgggc tacaaccgct
      841 tcgggaacat gaccgacatc cccttcggca gcaccaacaa cttccccgtg ccggccatgc
      901 caggcatggg cggcatgccc tcgatccagt acgtgaccgc cacgaacaac ctcggcgaca
      961 tggaccagtg gaccctcacc tggaagcaca aggtgggtga caccttcacc tacttcgcca
     1021 gctacggcca catcaagagc aagcccaatg gcaagatgag tcagtacggc gcctactgga
     1081 ccatgcctcc cgccatgggc ggcgaaaccg tccagctcgc cggcttcggc ggccttctcg
     1141 gcgacgccgt gaacagccag acggccagcg cctactacgt gggtatgcgc tgggatgcca
     1201 ccgagaagtt cgccttcggc gcagagttca accacggctc cccgcgctgg ttcacctaca
     1261 gccccgccac gggcgaagcc accgagaagc tcggcacccg cggcgacgtg tgggaaggct
     1321 acatccactg gcagttcgcg aagaacgccg cgttccgcct gggctacctg gactacaagt
     1381 acagccacgc cttcagcggc tggcacatct cccctggccc cgcgatgcct ggccagagct
     1441 gggaagatgc ctacgacctg aacaagaacc cgatgctgca gtacggcttc cccgcttcgg
     1501 tgaagaccac ctacgcctcg atcgaagtga agttctagtc caaccgcgac gcgggccggg
     1561 gaactcatcc ccggcccggg ccgcgtctgc ccggagaccc acgatgggaa ccactcgcat
     1621 ggatcgccgt ttcttcctga aggccgcggg cgccaccgcc ggagccgtcg ccaccacgca
     1681 ggtgggatgc ctcaagtact tcaagaaggg acgcacctcc tccaccgatg accgtgaagt
     1741 gcccaccacc tgcgagctgt gccccaacaa gtgctccgcc atcgccgtgg tccagggcgg
     1801 cttcgtcaag aagctgaacc ccaaccccga gaacccgaaa tcccgggaca tgctctgcgc
     1861 ccgcggcaac gcggccatca agcaggtcta cgatcccgac cgcctcaagc agcccatgat
     1921 ccgcgtgggg gcccggggcg aggggaaatg gaagcccgtc agctgggacg aggccttcga
     1981 cttcgccgcc aagaagctgg ctgacatcaa ggccaagcac ggcccggagg ccacgctctg
     2041 gtcctccacc gagggcttcc aggaagtctt cttcaagaac ctgggcctcg ccttcggctc
     2101 gcccaatctc gtgcgccacc ccaccctgtg cctggcctcg gtgaacctgg cctacagcgc
     2161 gacttttggc acggtgccca gcttcgacct gctcaacagc aagttcgtca tcatgtccgg
     2221 ggcgaaccga ttcgagagca tcatcacgcc cgacaccatg gacctcatcg gcggcgtgat
     2281 ggaacgcaag gccaagctgg tctacctcga tccccgcttc accgtcaccg cctcgaaggc
     2341 cgacgagtgg taccccatca agcccggcac cgacctggcc ttcatcctgg cgatgatcca
     2401 cgtgatcatc aaggagaacc gccacagcaa ggacttcgtg gccgcctaca ccaccggctt
     2461 cgaccagctg gcggagcacg tgaagcagta cacccccgag tgggccgaga aggaaacgga
     2521 gatccccgcg aaggacatcg tccgcatcgc ccgggagttc tccgacgccg cgccccgggc
     2581 cctctactac gcgggacggc gctcttcctg gtaccagaac gacttccaga tgcgccgcgc
     2641 ccaggccatc ctcaacgcca tcatcggcaa ctgggaccag cccggcggca tggtgcccaa
     2701 cgccaagctg cccaagggcg agttcctctt catgccctgg gacgagccca aggcgccccg
     2761 ggtcgatgag atcgacaagc acttcccgct cgccgccaag ggcgacggcg tctacctgaa
     2821 gctccgcgag aacgtgctca ccggaaagcc ctaccccatc aagggctgga tggtctacaa
     2881 gcaggatccg ctcaacgcca tgccggacca ggcgaagacc ctgaagatga tcgagggcat
     2941 ggatttcatc ggcgtcatcg acgtgcagat gagcgacatg gcctggtatg ccgacgtcgt
     3001 gttccccgag agcgcctacc tggaacgcac ggatccggtg gaagtcatgc ccggcatctg
     3061 gcccgccgtg gtctaccggc agcaggtggt gaagcccatc catgacacga agccgaacct
     3121 tgagatcgtc cagggcctgg ccaagcgcct ggggctcgcc gactacttcg actacaccat
     3181 cgagcagtgg gtggaggcag agttcaagga gctgcccatc cccatggccg ccgagcacat
     3241 gaagaagcac ggcgtgtggg ccgccagcgg ccagcccagc tacggcaaga cgctcaaccc
     3301 cgaccaccgc ttcgtcacca agaccggaaa gatcgaactg ttctctgaac gcctccagga
     3361 ggcgggccag gatccgctgc cggtctacgc cgcgccggtg ccgccaccca gcgaccgctt
     3421 ccgactgatc ctcggccggg tgggctactt cacccacgcc aaccagtcga acaacgtctg
     3481 gttgaacgag ttcatgaagg agaacgacct ctggatcaat ccgaaaccgg cggagcgcct
     3541 tggcatccgg gatggagcct atgtcagcgt caccagcagc gtcggcgccg tgaagctcaa
     3601 ggcgcgggtc actgaggaga tccggcccga ctgcgtgttc atgctccacg ggttcggcaa
     3661 gaaatccaag atgcagagcc tagtctacaa cgtgggcgcc tcggatgcgg tgatcctcga
     3721 gaccgcctgg gacaaggtct ccggcaatgc ggccttccac gaaaccttcg tcaaagtcgc
     3781 caacgcctga ggggggtgaa ccatggccat caagaagaaa cgctacgccc tcgtcatcga
     3841 ctccaggaag tgcatcaact gcaaagcctg cgtggtcgcc tgcaaggccg agaacgaggt
     3901 cccggtcggc aacttccgga actggatcaa tgaggagcga cagggcgagt acccgaagct
     3961 ccgcatcgat ttcgagcccg agcagtgcca ccactgcgag catccctcct gcgcccgcgt
     4021 atgccccacg ggcgccacat ggcagcgcaa ggacggcatt gtgctcgtga actacgacga
     4081 gtgcatcggc tgccgctatt gcatggtggc ctg
//
LOCUS       DATGWW010000389         1562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_254597, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000389 DATGWW010000000
VERSION     DATGWW010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254597"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1481)
                     /locus_tag="VK150_05590"
     CDS             complement(<1..1481)
                     /locus_tag="VK150_05590"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP30813.1"
                     /translation="MTGYYLRFPPLPIMLRCFFAVLLGSAVLSGAAPGAPDFRLPTTD
                     ELPGASDEVRAALGAFENKDAGGAVKRLQAAAAKDDANAQFVLGLCLQYGQGVTQSLE
                     QARAMYEKAAGNGQPAAQFFLGMFLLNSGSKEPESAAREAMAWLEKAALQKFHRANHQ
                     LADMYLNEVGVKRDVTKARDWLKKGSQNGDPVASYRLAIMNEKGEGLAKPDPEGALTL
                     YEKAADEGLPEAMIYLGRMHQSGARGERDMEKARAYYEKAEKLKVPEARFRLGQLYQH
                     GLGVEKDEARAVFYFRKGAEQNEPNCIFQLGQMAAAGAGTKKDEAEAREWFKRAAQMN
                     FAPAVATLGMMNEEGQAGFEKNPKEALRYYVQAGELGDAASQNKLGVWYRSGEGPVLK
                     DNVAAAAWFGLAVQSGYAAAQVNLGLMAEEGAGMPRNYALAGQLFEAAAAQGHALGMF
                     FMGRLLESGRGAPPNPVGAFVLYEQAAPLHPPAAEARDALKPKL"
BASE COUNT          236 a          584 c          457 g          285 t
ORIGIN      
        1 agttttggtt tcagggcgtc gcgggcctcg gcggcgggcg ggtgcagcgg ggcggcctgc
       61 tcgtaaagaa cgaaggcgcc gaccgggttg gggggcgctc cccggcctga ttccagcagg
      121 cggcccatga agaacatgcc cagggcatgc ccctgggcgg cggcggcttc gaacaactgg
      181 cccgccagcg cgtagttccg cggcatgccc gctccctcct cggccatcag gccgaggttg
      241 acctgggcgg cggcgtatcc cgactggacc gcgagcccga accaggccgc ggccgccaca
      301 ttgtccttga ggaccgggcc ctcaccgctg cggtaccaga ctcccagttt gttctgagag
      361 gccgcatccc ccagttctcc ggcctgcaca tagtaccgca gcgcctcctt ggggttcttc
      421 tcaaacccgg cctgcccctc ctcgttcatc atgcccagcg tggccacggc cggggcaaag
      481 ttcatctgcg ccgcacgctt gaaccattcc cgggcctcgg cctcgtcctt cttggttccc
      541 gcgcccgcgg cggccatctg gcccagctga aaaatgcagt tgggctcgtt ctgctcggca
      601 cccttgcgga aataaaagac ggcgcgcgcc tcatcctttt ccaccccgag gccatgctgg
      661 tacaactgcc cgagccggaa tctcgcctcg ggaaccttca gcttctcggc cttctcgtaa
      721 tacgcccgcg ctttctccat atcccgctcg ccccgcgccc cgctctggtg catgcgcccg
      781 agataaatca tcgcctccgg cagcccttcg tcggccgcct tctcgtacag cgtgagcgct
      841 ccctccgggt ccggcttggc caggccttcc cccttctcgt tcatgatcgc cagtcggtag
      901 ctggccaccg gatccccatt ctgcgacccc tttttcagcc agtcccgggc cttggtcacg
      961 tcccgtttga ccccgacctc gttgaggtac atgtcggcca gctggtggtt ggctcgatgg
     1021 aatttctgca gggccgcctt ctccagccag gccatcgcct ccctggccgc gctctcaggc
     1081 tccttggacc cgctgttgag caggaacatc ccgaggaaga actgcgccgc cggctggccg
     1141 ttgccagccg ccttttcgta catcgcgcgc gcctgctcga gagactgcgt caccccctgg
     1201 ccgtactgaa ggcacaaccc gagcacaaat tgcgcgttgg catcatcctt ggccgccgcg
     1261 gcctgcagcc gcttcaccgc ccctcccgcg tccttgtttt cgaacgcccc gagcgccgcc
     1321 cgcacctcgt cactcgcacc cggcagctcg tccgtcgtgg gaagtctgaa gtcgggagct
     1381 ccgggagccg cgcccgacag cacggcagag cccagcaaaa cagcaaaaaa acaacgcagc
     1441 atgatcggca gagggggaaa ccgaagatag tagccggtca cgggcgggcc agcaacacgg
     1501 gtttggatcc atcccagcgc ccttcgctgc gggtttcggt cccgtcagcc cagcgcacca
     1561 cg
//
LOCUS       DATGWW010000390         2178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_437981, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000390 DATGWW010000000
VERSION     DATGWW010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_437981"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1596
                     /locus_tag="VK150_05595"
     CDS             <1..1596
                     /locus_tag="VK150_05595"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HLP30814.1"
                     /translation="ADPFAVFPPAASFSQAAVPVPAPAPQALLSSADIFGEVLQEVEA
                     LPVAVPERGNLPVASVKVASTRLGESRPAVPTKDIPSPVPVPPSDALPPVEPLGPSDF
                     TLSGISGVNDPFEWAAQPAATPASAPAPSRPGTPDVLEEYGNYFLLEKIAVGGMAELF
                     KAQQRGVQGFQKIVAIKRILPHFSDNEDFVTMFIDEAKLAAQLTHPNIVQIFDLGKAG
                     SSYYIAMEYVNGRDLRTLLRKVREYGMPFPEQVAAFVVMKVASALDYAHRKRGFDDRE
                     LKLVHRDISPQNIILSTDGAVKLVDFGIAKAASKASHTVAGALKGKLLYMSPEQATGQ
                     PLDNRSDLYSLGLVLFELLTGERCFQADSELGVLEKVRLGRISDLATLNPNISREMTA
                     IVNRALQKGVDHRYPSARFMERDLRDYLQRQGTPLAEHDVAEYMQALLMGTRETLEAL
                     VTSRFPVPTSLTSGTHRVLGDHTSGATATHRGSQSSTETTTEPLLPAPPESIVTPRPR
                     WLLPAILTLAVILVIMLIVAGQS"
     gene            1652..1882
                     /locus_tag="VK150_05600"
     CDS             1652..1882
                     /locus_tag="VK150_05600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30815.1"
                     /translation="MDLSQDQKAFYEMTRERCRSEVSQINNTIASEVQRVKDLLTSLS
                     NRKTAVLQMYGAACEVLGEENDLAEESIEIEF"
     gene            complement(1911..2153)
                     /locus_tag="VK150_05605"
     CDS             complement(1911..2153)
                     /locus_tag="VK150_05605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30816.1"
                     /translation="MIQQTLSLEEQPPKKVESPTGFYLQPWQKGLLLIVLLGLLYLRI
                     WRRKQAKIQICSHCGKKNPPHQSNCQKCAAPLMRLH"
BASE COUNT          359 a          771 c          692 g          356 t
ORIGIN      
        1 gccgatccct tcgcggtgtt ccccccggcg gcctccttct cccaggccgc ggtgcccgtt
       61 ccggccccgg ccccccaggc cctgctcagc tcggccgaca tcttcggcga ggtgctgcag
      121 gaggtcgagg cgctgcccgt ggccgtcccg gagcggggaa atctgcccgt cgcctccgtg
      181 aaggtggcct cgacgcgcct tggggaatcc cggccggccg tccccacgaa ggacatcccg
      241 tcgccggtgc ccgtcccgcc ttcggacgcc ctgcctccgg tggaacccct gggcccttcg
      301 gacttcaccc tgagcgggat ctccggggtg aacgatccct tcgagtgggc cgcgcagcct
      361 gcggccaccc ccgcctccgc cccggccccc agccggcccg gcaccccgga tgtcctcgag
      421 gagtacggga actacttcct gctcgagaag atcgccgtgg gcggcatggc cgagctgttc
      481 aaggcccagc agcggggcgt gcaaggcttc cagaagatcg tggcgatcaa gcgcattctg
      541 ccgcacttca gcgacaacga ggacttcgtc acgatgttca tcgacgaggc caagctggcc
      601 gcccagctca cccacccgaa catcgtgcag atcttcgacc tggggaaggc cggcagctcg
      661 tactacatcg ccatggagta cgtgaacggc cgcgacctgc gcacccttct gcggaaggtg
      721 cgggagtacg gcatgccctt cccggagcag gtggcggcct tcgtggtgat gaaggtggcc
      781 tcggccctgg actacgcgca ccgcaagcgg ggattcgacg accgcgagct caagctcgtg
      841 caccgcgaca tcagcccgca gaacatcatc ctgtccacgg acggggcggt gaagctcgtg
      901 gatttcggca tcgccaaagc cgccagcaag gcgagccaca cggtggccgg ggcgctgaag
      961 ggcaagctgc tctacatgag ccccgagcag gccacgggcc agcccctgga caaccgctcc
     1021 gacctctact ccctgggtct ggtgctcttc gagctcctca ccggggagcg ctgcttccag
     1081 gcggattcag agctgggcgt gcttgagaag gtgcggctgg gtcggatctc cgacctggcc
     1141 acgctgaatc cgaacatctc gcgggagatg acggccatcg tgaaccgggc cctgcagaag
     1201 ggcgtggacc accggtaccc atcggcgcgg ttcatggagc gggacctccg cgattacctg
     1261 cagcggcagg gcacgcccct cgccgagcac gacgtggcgg agtacatgca ggctctgctc
     1321 atgggcaccc gcgaaaccct cgaagccctc gtgacctccc gcttccccgt gcccaccagc
     1381 ctcaccagcg gcacccaccg ggtgctgggc gaccacacca gcggggccac ggccacccat
     1441 cgcggctcgc agtccagcac cgagaccacc accgagccgc tcctgcccgc gccgcctgaa
     1501 tccatcgtga ccccgcgtcc gcgctggctg ttgccggcga tcctgacgct ggctgtgatc
     1561 ctggtcatca tgctgatcgt ggcaggccag tcctgaaccg ggataaactc gaccttccca
     1621 aatccgtttc ccatcccata tggagtaccc catggatctg agccaggacc agaaagcctt
     1681 ctacgagatg acccgcgagc gctgccgctc ggaggtctcc cagatcaaca acaccatcgc
     1741 ctccgaggtg cagcgggtga aggacctgct caccagcctc agcaaccgca agaccgcggt
     1801 gctgcagatg tacggcgccg cctgtgaagt gctgggcgag gagaacgacc tcgccgagga
     1861 atccatcgaa atcgagttct aggtcccggc ttccggcgct tccagccggg tcaatgaagc
     1921 cgcatcaggg gcgctgcgca cttctggcag ttgctctggt gcggcggatt cttttttccg
     1981 cagtggctgc agatctggat ctttgcctgc ttccgccgcc agatgcggag gtagaggagg
     2041 cccagcagca cgatgaggag caggcccttc tgccagggct ggaggtagaa cccggtgggg
     2101 ctctccacct tcttgggggg ctgttcctcg aggctcaggg tctgctggat catgcgtcgc
     2161 taccttcatc ggcggggg
//
LOCUS       DATGWW010000391         2317 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_29220, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000391 DATGWW010000000
VERSION     DATGWW010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2317
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29220"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1613
                     /gene="gltA"
                     /locus_tag="VK150_05610"
     CDS             <1..1613
                     /gene="gltA"
                     /locus_tag="VK150_05610"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR01316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004355 - glutamate synthase (NADPH)
                     activity [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADPH-dependent glutamate synthase"
                     /protein_id="HLP30817.1"
                     /translation="DGPDFDGHQVDFNMLRMRQDWYKTEEKDICDPHECKIGRVAATG
                     PVDYSQYLHEPVADLDWQNLDLNTIKPSQKMKIPRQEMACQPPELRVCNFDEVSLGLG
                     PDQAKLEAARCIQCKHPACIEGCPVSINIPAFLMQIVQDNPQGAARIIKESSSLGSVC
                     GRVCPQEKQCEIKCVVGIKGDPVSIGRLERFASDSMLGSQELPPVEAPTGKKVAVIGA
                     GPAGLTVAGELIKKGHQVTVYDAFHKPGGVMLYGIPEFRLPNKIVDQEVDTLRRLGVT
                     FVMNTLVGRSMTLEDLRKDFDAIFMGTGAGLPKMMGIPGEEYKGVYTANEFLTRINLM
                     RADLFPNYSTPVTVGKNVIIVGAGNTAMDAARAARRMGAEHVTVVYRRTVKESTARKE
                     ELEHAHEEGVAFKFLCTPVQLHGNDKGWMTHAECAVMELGEPGPDGRRSPKMTDERIT
                     IPCETLVVALGFDVNPLLAMTEKGLKTLKGGVVVVDNETGETSLPGVFAGGDVITGGA
                     TVILAMGQGRRAAAAIHRRLVGETQGAV"
     gene            1732..>2317
                     /locus_tag="VK150_05615"
     CDS             1732..>2317
                     /locus_tag="VK150_05615"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30818.1"
                     /translation="MSQRVMKTLDGNEATASVAHRLSEVIAIYPITPSSNMGEWADEW
                     SSQGKTNVWKTIPSVIEMQSEGGAAGAVHGALQAGSLTTTFTASQGLLLMIPNMYKIA
                     GELTPFCMHVTARTLAAHALSIFGDHSDVMSCRMTGFAMLSSESVQQAHDFAAICHAA
                     TLHSRVPILHFFDGFRTSHEVAKIEILNDEDLRHM"
BASE COUNT          436 a          838 c          698 g          345 t
ORIGIN      
        1 tcgacggccc cgacttcgac ggccaccagg tggacttcaa catgctccgc atgcgccagg
       61 actggtacaa gacggaagag aaggacatct gcgatccgca cgagtgcaag atcggccgcg
      121 tggccgccac cggtcccgtg gactactcgc agtatctcca tgagcccgtg gccgacctgg
      181 attggcagaa cctcgacctg aacaccatca agcccagcca gaagatgaag atcccccgcc
      241 aggagatggc ctgccaaccg cctgagctgc gcgtgtgcaa cttcgacgag gtgagcctgg
      301 gcctcggtcc cgaccaggcc aagctcgaag cggcccgttg catccagtgc aagcatcccg
      361 cctgcatcga gggctgcccg gtgagcatca acatcccggc cttcctcatg cagatcgtgc
      421 aggacaaccc ccagggcgct gcccgcatca tcaaggagag ctcctcgctc ggctccgtct
      481 gcggccgcgt ctgcccgcag gaaaagcagt gcgagatcaa gtgcgtggtc ggcatcaagg
      541 gcgatcccgt ctccatcggc cgcctggagc gcttcgccag cgactccatg ctgggctcgc
      601 aggagctgcc gcccgtcgag gcgcccaccg gcaagaaggt cgccgtcatc ggcgcgggcc
      661 ccgcgggcct cacggtggcc ggcgagctca tcaagaaggg ccaccaggtc acggtctacg
      721 atgccttcca caagcccggc ggcgtgatgc tctacggcat tcccgaattc cgcctgccca
      781 acaagatcgt ggaccaggag gtggacaccc tccgccgcct gggcgtgacc ttcgtgatga
      841 acacgctcgt gggccgcagc atgaccctcg aggacctgcg caaggacttc gacgccatct
      901 tcatgggcac cggtgccggc ctccccaaga tgatgggcat ccccggcgag gagtacaagg
      961 gcgtctacac cgccaatgaa ttcctcaccc gcatcaacct catgcgcgcc gacctgttcc
     1021 ccaactactc caccccagtg accgtcggga agaacgtcat catcgtgggc gcgggcaaca
     1081 cggccatgga cgccgcccgg gccgcccgcc gcatgggcgc cgagcacgtc acggtggtct
     1141 accgccgcac cgtcaaggaa tccaccgccc ggaaggagga gctggagcac gcccacgagg
     1201 agggcgtggc gttcaagttc ctctgcaccc cggtccagct ccatggcaac gacaagggct
     1261 ggatgaccca cgccgagtgc gcggtgatgg agctgggcga gcccggtcct gatggccgcc
     1321 gcagccccaa gatgaccgac gagcggatca cgatcccctg cgaaaccctg gtggtcgccc
     1381 tgggctttga cgtcaacccg ctcctcgcca tgacggaaaa gggcctgaag accctcaagg
     1441 gcggggtggt tgtggtggac aacgaaaccg gcgaaacctc cctcccgggt gtgtttgcgg
     1501 gcggcgatgt catcacgggc ggggccaccg tcatcctggc catgggccag ggccgccggg
     1561 ctgccgctgc catccaccgg cgcctcgtcg gggagaccca gggcgcggtc tgaccacccg
     1621 acctagtgtg accaaattga ccgatccatc ttgtatcatg ggccaggcaa gatccctgtc
     1681 ctgatacccg ttgccagaca tgccaattgt gccccccgga aggagcgaac catgagccag
     1741 cgcgtgatga agaccctgga tgggaacgag gccaccgcct cggtcgccca tcgcctcagc
     1801 gaagtcatcg ccatctaccc catcaccccc tcctcgaaca tgggcgagtg ggctgacgag
     1861 tggagctccc agggcaagac caacgtctgg aagaccatcc cctcggtgat cgagatgcag
     1921 tccgaaggcg gcgccgcggg cgccgtgcac ggcgcgctcc aggccggcag cctcacgacg
     1981 accttcacgg cgtcccaggg cctcctcctg atgatcccga acatgtacaa gatcgccggc
     2041 gagctgacgc ccttctgcat gcacgtcacc gcccgcaccc tggccgccca tgccctcagc
     2101 atcttcggcg accactcgga cgtgatgtcc tgccgcatga ccggcttcgc catgctgtcc
     2161 tcggagagcg tgcagcaggc ccacgacttc gcggccatct gccacgccgc caccctgcac
     2221 agccgcgtcc ccatcctcca cttcttcgac ggcttccgca ccagccacga agtcgccaag
     2281 atcgagatcc tcaacgacga ggacctgcgc cacatgg
//
LOCUS       DATGWW010000392         3044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_342978, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000392 DATGWW010000000
VERSION     DATGWW010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3044
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342978"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            86..697
                     /locus_tag="VK150_05620"
     CDS             86..697
                     /locus_tag="VK150_05620"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HLP30819.1"
                     /translation="MKPAAALIALTGLALSAQAEPGGNRMGLGLSAVSPQGDLGSVFD
                     TGFQAGLQIHFNRESRHLGRLRVDYLRMDSKRPISLGTWAIWNGSTYVPTPQLADSRM
                     EAYSVAYEWMPHLDPEGRSGFYGIFGMGGTLWNETWRNTTVYAGTDTDSELGFTLSAG
                     AGWRFNTHAALEARYVHSDLTFHGHHRYGSERSYLAFGTSLRF"
     gene            724..2373
                     /locus_tag="VK150_05625"
     CDS             724..2373
                     /locus_tag="VK150_05625"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF015536.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016805 - dipeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0070004 - cysteine-type exopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C69 family dipeptidase"
                     /protein_id="HLP30820.1"
                     /translation="MRIRPLVLLATLLTAGAALDACTNLLVTKGASKDGSTMITYAAD
                     SHTLYGELYFKRGGRHLAGEVREIREWDSGYTFDTGKILGSIPEAPVTYTRVGNMNEH
                     QLTIAETTFGGRKELAGPSGIIDYGSLIYIALERAKTAREAIDVMTKLTEQFGYASSG
                     ESFSIADPNEVWILEMIGKGKGQKGSLWVAHKLPDGTISAHANQARIRQFPLNDPKTA
                     VYSKDLIPFAREKGWFKGDDKSFSFADTFAPLTFGALRACEARVWSIFNRAAKSQKIP
                     MDFVKAEKGAKPMPLFIKPDEKLDVRDAMELMRDHYEGTDFDMTKDVGAGPYKLPYRW
                     RPMGFKIDGQDYVHERAISTQQTGFSFVSQSRSWLPDAVGGVLWFGVDDTYTTVYVPI
                     SCGIKEAPSAFAIGTGNFNEFSWDSAFWTFNFVSNYTYTRWSDMIVDVQRVQREFESR
                     YLADQAEVDRTALDLYKQNPGLAKEYLTQYAAKETDKLMARWKKLGESLIWKYLDGNV
                     RNEKGEVTHPKAPEDWLRCIVKDHGDVIKVKKVEGLALDEE"
     gene            2460..>3044
                     /locus_tag="VK150_05630"
     CDS             2460..>3044
                     /locus_tag="VK150_05630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30821.1"
                     /translation="MSRWFSLALSCALFAGPPEFKKEANRSVAAGDWARLQALAEAQA
                     ASAPRDADAHLLLGVALANQGRSTEAIATFRTAGGLAPDRVEPWYNLSLVGAQIKQRS
                     LAAEGLDEVAKRNYGAALRLMRLAPVEDILGANLPAAEVEFKEVMVRYQPPAPPYPMD
                     SRLNRTQGTVLVMVVQDREGRVIRAQAISGPDALR"
BASE COUNT          550 a         1127 c          919 g          448 t
ORIGIN      
        1 cgacttcccg gaattccgcc aggctttcgg ctgcgatccg gcccccgctg gccagtctcc
       61 cacggccatc tggtagcctg cggacatgaa gcccgccgcc gccctcatcg ccctcaccgg
      121 cctcgccctc tccgcccagg cggagcccgg cgggaaccgc atgggcctcg gcctctccgc
      181 ggtctcgccc cagggcgacc tgggctccgt gttcgacacc ggtttccagg ctggcctcca
      241 gatccacttc aaccgggaga gccgccacct gggtcgcctg cgcgtggact acctccggat
      301 ggactcgaaa cgccccatct ccctgggcac ctgggccatc tggaacggca gcacctacgt
      361 ccccaccccc cagctggccg acagccgcat ggaggcctat tcggtggcct acgagtggat
      421 gccgcacctc gatcccgagg gccggtcggg gttctacggc atcttcggca tgggcggcac
      481 cctgtggaat gaaacctggc gcaacaccac cgtctacgcc ggcaccgaca cggactccga
      541 gcttggcttc accctcagcg ccggcgcggg gtggcggttc aacacccatg ccgcccttga
      601 agcccggtac gtccacagcg acctgacctt ccatggccat caccgctatg gctccgaacg
      661 atcgtacctg gccttcggca ccagcctccg cttctgaacc caaccccact tccaaggatc
      721 cccatgcgca tccgccccct cgtcctcctc gccaccctcc tcaccgcggg cgcagccctg
      781 gacgcctgca ccaacctgct cgtgaccaag ggcgcgagca aggacggctc gacgatgatc
      841 acctacgccg ccgacagcca cacgctctac ggcgaactct acttcaagcg cggcggaagg
      901 cacctggccg gggaagtgcg cgagatccgc gagtgggaca gcgggtacac cttcgacacc
      961 ggcaagatcc tcggcagcat ccccgaggcg ccggtgacct acacccgcgt gggcaacatg
     1021 aacgagcacc agctcaccat cgccgagacc accttcggcg gccggaagga gcttgcggga
     1081 cccagtggca tcatcgacta cggcagcctc atctacatcg ccctggagcg tgccaagacc
     1141 gcccgcgagg ccatcgacgt catgaccaag ctgacggagc agttcggcta cgccagcagc
     1201 ggcgagagct tctccatcgc cgatcccaac gaggtgtgga tcctcgagat gatcggcaag
     1261 ggcaagggcc agaagggctc gctgtgggtg gcccacaagc tgcccgacgg aaccatcagc
     1321 gcccacgcca accaggcccg catccgccag ttccccctga acgatcccaa gaccgccgtc
     1381 tacagcaagg acctcatccc cttcgcccgg gagaagggct ggttcaaggg cgacgacaag
     1441 agcttcagct tcgccgacac cttcgcgccc ctcaccttcg gggccctgcg cgcctgcgag
     1501 gcccgggtgt ggagcatctt caaccgcgcc gccaagagcc agaagatccc gatggacttc
     1561 gtgaaggccg agaagggcgc caagcccatg cccctcttca tcaagcccga cgagaagctg
     1621 gacgtgcgcg acgccatgga gctcatgcgc gaccactacg aaggcaccga cttcgacatg
     1681 accaaggatg tgggcgcggg tccctacaag ctgccctacc gatggcgccc catgggcttc
     1741 aagatcgatg gccaggacta cgtccacgag cgggccatca gcacccagca gaccggtttc
     1801 tccttcgtga gccaaagccg ctcctggctg cccgacgccg tgggcggcgt gctttggttc
     1861 ggcgtggacg acacctacac caccgtctat gtgcccatct cctgcggcat caaggaagcc
     1921 ccctcggcct tcgccatcgg caccgggaac ttcaacgagt tcagctggga cagcgccttc
     1981 tggaccttca acttcgtctc caactacacc tacacccgct ggtccgacat gatcgtggac
     2041 gtgcagcggg tgcagcgcga gttcgaaagc cgctacctgg ccgaccaggc ggaggtggat
     2101 cgcaccgccc tcgacctcta caagcagaac cccggcctgg ccaaggaata cctcacccag
     2161 tacgccgcca aggagacgga caagctcatg gcccgctgga agaagctggg cgagtccctc
     2221 atctggaagt acctcgacgg caacgtccgc aacgagaagg gcgaagtcac ccaccccaag
     2281 gccccggagg attggctgcg gtgcatcgtc aaggatcacg gcgacgtgat caaggtgaag
     2341 aaggtcgagg gcctcgccct cgacgaggag tagacgccgc gctgcacccc ggaaggcccc
     2401 gccccgcggg gccttccttg tttcacgcag gctatgatgg gcctgccgcc gaggtgctga
     2461 tgtcccgttg gttctctctt gccttgtcct gcgcgctctt cgccggccct ccggaattca
     2521 agaaggaggc caaccgaagc gtggcggcgg gggactgggc ccgactgcag gcgctggcgg
     2581 aggcccaggc ggcgtccgcc ccccgcgacg ccgacgccca cctcctgctc ggtgtcgccc
     2641 tggcgaacca gggccggtcc accgaagcca tcgccacctt ccggacggcg ggagggctgg
     2701 cgccggatcg ggtcgaaccc tggtacaacc tcagcctcgt cggggctcaa atcaagcagc
     2761 ggtccctcgc cgccgagggc ctggacgagg tcgccaagcg caactacggc gccgccctga
     2821 ggctcatgcg gctggcgccc gtggaggaca tcctgggcgc gaacctgccc gctgccgaag
     2881 tcgagttcaa ggaggtcatg gtgcggtacc aaccgcccgc gcccccttat cccatggaca
     2941 gccggctgaa ccgcacacag ggcacggtcc tggtgatggt ggtccaggac cgcgaaggcc
     3001 gcgtcatccg ggcgcaagcc atctcggggc ccgatgcgct ccgc
//
LOCUS       DATGWW010000393         2135 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_76381, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000393 DATGWW010000000
VERSION     DATGWW010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76381"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..476)
                     /locus_tag="VK150_05635"
     CDS             complement(<1..476)
                     /locus_tag="VK150_05635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30822.1"
                     /translation="MRLSPSLRARVAGGFALLCVAVSLGLGGWIYYTSRDLESRLIDE
                     ALGAETDDYRARLARNPRSLPPMTATVRGYLLRPDAPRDEIPPELRPLPYGRFTRKVG
                     DVGYRVAIAPSTEGVIYMLHSRAQVEYREQQIFAALLFGIAATALLSAAGGWWLAGR"
     gene            complement(466..1149)
                     /locus_tag="VK150_05640"
     CDS             complement(466..1149)
                     /locus_tag="VK150_05640"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLP30823.1"
                     /translation="MHLLVIEDNPDLVANLLDFLGSRGHTVDVAYNGYAGLGFALENR
                     YDAIVLDLMLPGIDGLEVCARLRAAHSPIPVLMLTARDSLEDKLEGFASGADDYLIKP
                     FALLELEARLQALQRRQRPGGGKGGCLQVGDLVLDTGTLQVTRAGQPLELPPIPLKLL
                     DLLMRRAPDVVSRAEMERAIWGETPPDSDALRAHLHFLRSAIDKPFPKPLLHTVRGFG
                     YRLSEDDEA"
     gene            1432..>2135
                     /locus_tag="VK150_05645"
     CDS             1432..>2135
                     /locus_tag="VK150_05645"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HLP30824.1"
                     /translation="MNFSKPHHYFVLSTVAALLTIILKTGAWWVTGSVGLLSDALESL
                     VNLAGATFALWMITIAKRPADKDHPFGHGKAEYFSSGFEGLLILLAAVAIIVSAASRL
                     MHPQPLEALGVGIVFSGISTAINFAVAIVLGRASLRFRSIALEADSKHLMTDVWTSVG
                     VVVGVLLVALTDALWLDPLIAIVVGLHIVKEGVGLIRASVQGLMDEAVEGPVLTEVEL
                     VLQSFCQEGVGWRNLRT"
BASE COUNT          325 a          712 c          735 g          363 t
ORIGIN      
        1 cgccccgcca gccaccagcc gccggcggcg gagagcaggg cggtggccgc gatgccgaag
       61 agcagggcgg cgaagatctg ctgctcgcga tactccacct gggcgcggct gtggagcatg
      121 tagatgacac cctcggtgct cggggcgatg gcgacgcgat agcccacgtc gcccaccttg
      181 cgggtgaagc ggccgtaggg cagcgggcgc agctcgggcg ggatctcgtc ccgcggcgcg
      241 tcggggcgca gcaggtagcc gcgcaccgtg gcggtcatgg gcgggagcga gcgtggattg
      301 cgggcgaggc gtgcgcggta gtcatcggtc tcggcgccca aagcctcgtc gatgaggcgc
      361 gactccaggt cgcgggaggt gtaatagatc cagccgccaa ggcccaggct caccgccacg
      421 cagagcaggg cgaagccgcc ggccacgcgg gcccgcaggc tggggctaag cctcatcgtc
      481 ttcgctcagg cggtagccga agccgcgcac cgtgtggagc agcggtttgg ggaagggctt
      541 gtcgatggcc gagcgcagga aatggagatg ggcgcgcagg gcgtcgctgt cgggcggcgt
      601 ctccccccag atggcccgct ccatctctgc gcggctcacc acgtcggggg cgcggcgcat
      661 gagcaggtcg aggagcttca gcgggatcgg gggcagttcc agcggctgtc ccgcgcgggt
      721 cacctgcagg gtgccggtat cgaggaccag gtctcccacc tggaggcagc ctcccttgcc
      781 gccccccggc cgctggcggc gctgaagcgc ctggagccgc gcctccagct ccagcagggc
      841 gaagggcttg atcaggtagt cgtcggcacc gctggcgaac ccctccagct tgtcctccag
      901 gctgtcccgg gccgtcagca tcaagaccgg gataggggag tgggccgccc ggagccgggc
      961 gcagacctcc aggccgtcga tgcccgggag catcaggtcg aggacgatgg cgtcataccg
     1021 gttctcgagg gcgaaaccga ggccggcgta gccgttgtag gccacgtcca ccgtatgccc
     1081 ccgacttcca aggaaatcga gcaaattcgc gaccagatcc ggattgtcct cgatgaccag
     1141 gagatgcatg gtcccaccct tggcggaaaa aagccgattc tacgcggggg gcgcccctgc
     1201 ggcacccgcc cttttgggga ttcctgaaag ccgttcaggt tcgattcagg aggggggcct
     1261 aaccttggcc ccgtattctg aagtaacccc cgcctgacct tgttagtcga cgccaaacga
     1321 ctgacgtttt tcccgccccc aaggggcccc gaccggtgta tcgttcctcc tctccgatac
     1381 cggtcggggc ccgggggctt tcctttaaat gtcacatccg tttcaacacg catgaacttc
     1441 agtaagccgc accactactt cgtcctctct acggtcgccg cgctcctcac catcatcctc
     1501 aagacgggcg cctggtgggt caccggctcg gtgggcctgc tctccgacgc gctggaatcc
     1561 ctggtcaacc tggcgggcgc caccttcgcc ctgtggatga tcaccatcgc caagcgcccg
     1621 gccgacaagg atcacccctt cggccacggc aaggcggagt acttctccag cggtttcgaa
     1681 gggctgctga tcctgctggc ggccgtggcc atcatcgtct ccgcggcctc gcgcctgatg
     1741 cacccgcagc ccctggaggc gctcggggtc ggtatcgtct tttccggcat cagtaccgcc
     1801 atcaacttcg ctgtcgccat cgtgctgggt cgtgcctccc tgcgcttccg ttcgattgcc
     1861 ctggaggccg attcaaagca tctgatgacc gacgtctgga cctcggtggg cgtggtggtc
     1921 ggcgtgctgc tggtggcgct caccgacgcc ctctggctcg atccgctcat cgccatcgtg
     1981 gtcggcctgc acatcgtgaa ggaaggggtc ggcctgatcc gcgcctcggt gcaggggctc
     2041 atggacgagg cggtcgaggg gccggtgctg acggaagtgg aactggtgct ccagtctttc
     2101 tgccaggagg gggtcggctg gcgcaatctg cgcac
//
LOCUS       DATGWW010000394         2926 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_342990, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000394 DATGWW010000000
VERSION     DATGWW010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2926
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342990"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1669
                     /locus_tag="VK150_05650"
     CDS             <1..1669
                     /locus_tag="VK150_05650"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HLP30825.1"
                     /translation="ASATSPDWRLSNRRDLGGTGTSASWGTWDTFAGPAGAFFSGSGA
                     SGTAFLSPADGSNAVPGFLLIRSTNGTSQVVAPDSRMSRWRASEAMYFGLGYYSWSGS
                     HSPITSLDPATGTIVLTSAVDYGLRVGQPFFLYNLLEELTAPGEYFIDRVNSRLYLRP
                     PGDVLPAEILISTLQGPVVQMTSCKYVTWDGISFEAAKDRLVYASGAQNVTFRNCRFK
                     NAGGYGLALGGYANLVQACDFRDLGKGGVSMSGGDRYTLTPSGSTVENSEFQRFGRLF
                     WTYQPGINIDANSIGITAQHNELHHSPHAAILYGGNENIIRYNHIHHATQWTNDAGVI
                     YTTGREWGTQGNLIQFNLIRHCGSSLGTAVSGIYIDGVGSGVKVEGNILYYVGSLFAI
                     QHNGGRDVITQYNIMYGHWYGVDISNVGFEFVNNTAGSSWDLLGKLQKFNYQSPPWST
                     AYPHVALIPNSWSLLQGTKWIEPGGSACYGNLHYGSSSDVYRQHNSATYLAPPVSWFN
                     LLGSNLSQVDPLFVDAANLDFRLQPASPMFAVPGFPGIDVAKIGIQR"
     gene            complement(1666..2727)
                     /locus_tag="VK150_05655"
     CDS             complement(1666..2727)
                     /locus_tag="VK150_05655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30826.1"
                     /translation="MPESPDPLHLRGTARGRALLIDRGGRFYVARKYRIFRSDDAGAT
                     WVLDCEVPAAGWKPLAAASAPAARLLRFNIQAFQLLEDGTRVAVARDGIYRAAPGEIH
                     MTKTWSVTRGSRPITLSADGQRVLFGEYGGAEMDQVPVRVYLSEDGGRRFEPFHAFPK
                     GDIHHIHNVVVDPYADHYWVLAGDHGRTPGIAALSRDGRHLDWLDRGHQMVRAVSVLP
                     RPDCLLYGSDSEVEPNHLIRLDKKTARCERLQPVEGSSLYAADVGGMAVISTSVEASA
                     VNTARHCSLYGSRDDATWTRLVSFEKDFWSPLLQFGLVVLPVVQEPNLAHWMFSGQAL
                     KGHHDRVTLCSSLAVGAQT"
BASE COUNT          502 a          989 c          943 g          492 t
ORIGIN      
        1 ggcttccgcc acgagcccgg attggcgcct gtcgaaccgc agggatctcg gcggcaccgg
       61 aaccagcgcc tcctggggca cctgggacac cttcgccggg cccgccggcg cgttcttcag
      121 tggctccgga gcctcgggca cggccttcct ttctcccgcg gacgggtcga acgccgtgcc
      181 gggcttcctg ctcatccgca gcaccaacgg cacctcgcag gtcgtcgcgc cggattcccg
      241 catgagccgc tggcgtgcct ccgaggccat gtatttcggg ctgggctact acagctggtc
      301 gggcagccac agccccatca cgtccctgga tcccgccacc gggaccatcg tgctgacgag
      361 cgccgtcgac tatggactgc gggtcggcca gcccttcttc ctctacaacc tgctggaaga
      421 actcacggcc ccgggcgaat acttcatcga ccgcgtcaac tctcggctct atctgcgtcc
      481 gccgggggat gtgctgccgg ccgagatcct gatctccacc ctgcaggggc cggtcgtaca
      541 gatgacgagc tgcaagtacg tcacctggga cggaatttcc ttcgaagccg ccaaggatcg
      601 gctggtctac gcctccggcg cccagaacgt gaccttcagg aactgccggt tcaagaacgc
      661 gggcggctac ggcctcgcgc tcggcggcta cgcgaatctg gtccaggcct gcgatttcag
      721 ggacctgggg aagggtggcg tgtccatgag cggcggtgac cgctacaccc tcacgcccag
      781 cggctccacg gtcgagaaca gcgagttcca gcgcttcggg cgtctgttct ggacgtatca
      841 gccgggcatc aacatcgacg ccaacagcat tggcatcacc gcccagcaca acgaactcca
      901 ccactcgccc catgccgcca ttctgtacgg cggcaacgag aacatcatcc gctacaacca
      961 tatccaccac gccacgcagt ggacgaacga cgccggcgtg atctacacca ccggacgcga
     1021 atggggcacg caggggaatc tcatccagtt caacctgatc cggcactgcg gcagctccct
     1081 gggtacggcg gtctcgggca tctacatcga tggcgttggc agcggcgtca aggtggaagg
     1141 aaacatcctc tactacgtcg gctcgctctt cgccatccag cacaacggcg gccgggatgt
     1201 catcacccag tacaacatca tgtatggaca ctggtacggg gtggacatca gcaatgtcgg
     1261 cttcgagttc gtgaacaaca ccgccggatc aagctgggat ctcttgggca agctccagaa
     1321 gttcaactac cagtcgccgc cctggtccac ggcctatccc cacgtcgcgt tgattcccaa
     1381 cagctggtct ctcctgcagg gcacgaaatg gatcgagccg ggcggatccg cctgctacgg
     1441 gaacctccac tacgggagtt cctcggatgt ctaccggcag cacaattccg ccacctactt
     1501 ggcgccgccg gtctcctggt tcaacctgct gggttcgaac ctgagccagg tggatccgct
     1561 cttcgtggat gctgcgaacc ttgacttccg cctccagccc gccagcccca tgttcgcagt
     1621 gcccggcttc ccgggcatcg acgtggcgaa gatcgggatc cagcgctagg tttgcgcgcc
     1681 caccgcaaga gatgagcaga gcgtgacgcg gtcgtggtgg cctttcaggg cctgtccgct
     1741 gaacatccaa tgcgcgaggt tgggctcctg gaccacgggg agtaccacca ggccgaactg
     1801 caggagcggc gaccagaagt ccttctcgaa ggagacgagg cgggtccagg tggcatcgtc
     1861 tcggctgccg tagaggctgc agtgccgggc cgtgttgacg gcgctggcct cgacgctggt
     1921 ggagatgacg gccatgccgc ctacgtccgc ggcgtagagc gagctgcctt ccaccggttg
     1981 caggcgctca cagcgggcgg tcttcttgtc caggcggatg agatggttcg gttccacctc
     2041 ggagtccgat ccgtacagca ggcagtcggg gcggggcagg acgctcacgg cccgaaccat
     2101 ctggtggccg cggtccagcc agtcgaggtg gcggccatcc cttgagagcg ccgcgatgcc
     2161 cggcgtgcgt ccgtggtcgc cagccagcac ccagtagtgg tcggcgtagg gatccaccac
     2221 cacgttgtgg atgtggtgga tgtcaccttt cggaaacgcg tggaacggct cgaagcgccg
     2281 tccgccgtcc tccgagaggt agacccgcac gggaacctgg tccatttccg cgccgccgta
     2341 ctcgccgaag aggacgcgct gcccgtccgc cgagagcgtg atgggacgag aaccccgcgt
     2401 gaccgaccag gtcttcgtca tgtggatttc acccggggcg gcccggtaga tgccatcccg
     2461 ggccacggcg acgcgggtgc catcctcgag caactggaag gcctggatgt tgaaccggag
     2521 caggcgggct gccggggccg aagcggccgc cagcggtttc catccggcgg ctggcacctc
     2581 gcaatccagc acccaggtgg cgcccgcgtc gtctgagcgg aagatccggt acttccgggc
     2641 cacgtagaac cgcccacccc gatcgatgag cagggcgcgg ccgcgggcgg ttccccggag
     2701 gtgaagaggg tcaggagact caggcatgcc cgatcctacc gggcccggtg gggatgtgga
     2761 gcggcatgcc ttccgggggc tccagcatgg ctccagggaa aggcgggccc gcttctgtcc
     2821 gcctgggctc ggggcagggc gccttgagtt cgaggcgcag atggaccagg cggctggagc
     2881 tcaatcccgg aacctccaca aaccccacgc gctcattgag ccgtct
//
LOCUS       DATGWW010000395         2253 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_29282, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000395 DATGWW010000000
VERSION     DATGWW010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29282"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..839
                     /gene="ccsB"
                     /locus_tag="VK150_05660"
     CDS             <1..839
                     /gene="ccsB"
                     /locus_tag="VK150_05660"
                     /inference="COORDINATES: protein motif:HMM:TIGR03144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HLP30827.1"
                     /translation="MWMSALFVMATFAYWFALFVRSDFTGRVATALTWTASGAGLVGM
                     MVRWRESYLISPDVGHIPVANLYEVFILFAVITGLLYLYYEGRYRNRALGAFALTVIS
                     AAVGFLLWYTFGRQGSDIQPLVPALQSYWMKIHVPANFVGYGAFALAAMIGVAYLIVE
                     SLLRRNPESELAKRLPLEQLDDVMYKSIALGFAFFTVATVLGAMWAAEAWGGYWSWDP
                     KETWALIVWLNYAAWLHMRLTKGWRGRPMAWWSVVGLVVTLFAFLGVNMFLSGLHSYG
                     SL"
     gene            complement(951..1448)
                     /locus_tag="VK150_05665"
     CDS             complement(951..1448)
                     /locus_tag="VK150_05665"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HLP30828.1"
                     /translation="MTNEAAQKRAELSEFLNKQNLCESLTLREVDLLLDFTELVEFKK
                     GQIIADIGEVGEALYFVVKGEAALFYENQGQQVELARVREGELMGEMSFFDREPRSGR
                     LLAMRPETRMLRLSRVMYQRLRVEHPYIAVNILEHAIVSLDRLFRRVSQDVATYSSYV
                     YGGKK"
     gene            1580..2230
                     /locus_tag="VK150_05670"
     CDS             1580..2230
                     /locus_tag="VK150_05670"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HLP30829.1"
                     /translation="MRFRALVAAVSFLFLPLTACGAAGDYAEGIDYRTITPPVAVDAT
                     RGKVQVMELFWYGCPHCYHMDAGLSAWVKRQPSWVEFVRVPAVFKRYNPDGSPNPWYL
                     HAKAFYALQSLGVGDKLHAAFFKAIHEQGRTLRNEDELAKFFAENGVAEKDFRPAFNS
                     FMVDTKVRQAMDLSTQSGINGVPALIVNGKYQALGDSSDVTFKVSDFLIAKEHGAR"
BASE COUNT          363 a          723 c          715 g          452 t
ORIGIN      
        1 tcatgtggat gagcgccctg ttcgtgatgg cgacctttgc ttactggttc gccctcttcg
       61 tccgctccga cttcaccggc cgcgtcgcca ccgccctcac ctggacggcc tcgggcgcgg
      121 gcctcgtcgg catgatggtg cgctggcgcg agtcctactt gatcagcccc gacgtgggcc
      181 acatccccgt cgccaacctc tacgaggtct tcatcctctt cgcggtgatc acgggcctgc
      241 tctatctcta ttacgaaggc cgctaccgca accgcgccct tggcgccttc gccctgaccg
      301 tgatcagcgc ggcggtgggc ttcctgctct ggtacacctt cggccgacag gggagcgaca
      361 tccagccgct ggtgcccgcg ctgcaaagct attggatgaa gatccacgtg cccgccaact
      421 tcgtcggcta cggcgccttc gcgctggcgg cgatgatcgg tgtcgcgtac ttgattgtgg
      481 aatcgctgct gcgcaggaat ccggagagcg agctggcgaa gcggctcccg ctcgaacagc
      541 tcgatgacgt gatgtacaag tccatcgccc tcggctttgc cttcttcacc gtggcgacgg
      601 tgttgggcgc catgtgggcg gcggaggcgt ggggcggtta ctggagctgg gacccgaagg
      661 agacctgggc gctgatcgtg tggctcaatt acgcggcctg gctccacatg cgcctgacca
      721 agggatggcg cggccggccc atggcctggt ggtcggtggt gggactggtg gtgacgttgt
      781 tcgccttcct gggcgtcaac atgttcctgt cagggctgca ttcgtacggg agcctatgag
      841 gaacgagggt cgaggagcta ggaactaggg gtggagtgcg ctgcgcgcac gtctttgatc
      901 aaaaaggcgg cgagcgcatc ccctcgtacc tagctcctcg aacctggctc ctattttttc
      961 ccgccgtaga cgtagctcga atacgtcgcc acatcctggc tcacgcggcg gaagaggcgg
     1021 tcgaggctga cgatggcgtg ttcgaggatg ttcacggcga tataggggtg ttccacccgc
     1081 agccgctggt acatcacccg cgagagacgc agcatgcgcg tctcggggcg catggccagc
     1141 aggcggccgg agcgcggctc gcgatcgaag aaggacatct cgcccatgag ctcgccttcg
     1201 cgcacccggg ccagttctac ctgctgcccc tggttttcgt aaaagagagc ggcctcgccc
     1261 ttgaccacga agtagagggc ctcgcccacc tcgccgatgt cggcgatgat ctggcccttc
     1321 ttgaactcca ccagctcggt gaagtcgagg agcagatcca cctccctgag ggtgagggac
     1381 tcgcacagat tctgcttgtt cagaaactcg ctcagttcgg cccgtttctg ggcggcttcg
     1441 ttcgtcatgg tccgcgacct cctggagatg atgggccata ggatagagca tccgcttcag
     1501 ggcgcggaag ccgtgtcctg cggtatagtt gtgaggaccg ccgcgggcgg tcaagtaatc
     1561 agccggtaag gagcctttca tgcgtttcag agccttggtt gccgccgtat cgttcctgtt
     1621 cctccccctg accgcctgcg gggccgccgg cgactacgcc gaggggatcg attaccggac
     1681 catcacccct cccgtcgccg tggacgcgac ccgcggcaag gtgcaggtca tggaactctt
     1741 ctggtacggc tgtccccact gctaccacat ggatgccggc ctctcggcct gggtgaagcg
     1801 ccagccttcc tgggtggagt tcgtgcgggt gcccgccgtc ttcaagcgct acaacccgga
     1861 cggctcgccc aacccctggt acctccacgc caaggccttc tacgccctgc agtcgctggg
     1921 ggttggcgac aagctgcatg ccgccttctt caaggccatc cacgaacagg gccgcaccct
     1981 gcgcaacgag gatgaactgg ccaagttttt cgcggaaaat ggtgtggcgg aaaaggattt
     2041 caggcccgcg ttcaactcct tcatggtcga caccaaggtg cgtcaggcca tggatctctc
     2101 cacccagtcg ggcatcaacg gggtgccggc gctcatcgtc aacggcaagt accaggccct
     2161 gggcgattcc tccgacgtga ccttcaaggt ttccgacttc ctgattgcga aagagcacgg
     2221 cgcccgctga gaccagggtc gccctgtgtc ggg
//
LOCUS       DATGWW010000396         1653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_303649, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000396 DATGWW010000000
VERSION     DATGWW010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303649"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..328)
                     /locus_tag="VK150_05675"
     CDS             complement(71..328)
                     /locus_tag="VK150_05675"
                     /inference="COORDINATES: protein motif:HMM:NF003817.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HLP30830.1"
                     /translation="MTRMVQCAKLGKQAEGLERQPYPGELGKRIFESISKEAWQMWLR
                     QQTMLINEYRLTPVNPKHREMLEGEMQKFLFGGAQGFVPPK"
     gene            complement(325..1374)
                     /gene="mutY"
                     /locus_tag="VK150_05680"
     CDS             complement(325..1374)
                     /gene="mutY"
                     /locus_tag="VK150_05680"
                     /EC_number="3.2.2.31"
                     /inference="COORDINATES: protein motif:HMM:NF008132.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HLP30831.1"
                     /translation="MSFAERLLAWFDRHGRKDLPWQQDRTPYRVWVSEIMLQQTQVAT
                     VIPYFERFMARFPDAAALADAPVDDVLALWSGLGYYSRARNLHAAAQQIRDLHGGRFP
                     ETLDEVTALKGVGPSTAGAILSQALGQRHPILDGNVKRVLTRHEAVAGWPGRSEVERR
                     LWAMALERTPASRCADYTQAIMDLGATLCTVRRPACDRCPVAEDCRARATGNPTAFPE
                     AKVRKAIPVRTATLLVVTNPAGEVLLWRRPPTGIWGGLWSLPELDPGETLEAWCARQG
                     ARAAAVEPWPGLRHTFSHFHLDITPLRVRVEESGSVMEPGGAVWYKADHCEQLGLPAP
                     IRRLLQGLQPEREHP"
     gene            complement(1377..>1653)
                     /locus_tag="VK150_05685"
     CDS             complement(1377..>1653)
                     /locus_tag="VK150_05685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30832.1"
                     /translation="EGTANLVNEKIDYRVDTGVVSAAPELAGLKGSTIPVRITGTFTD
                     PQFGVDVGAVLQDRAQQELQRQLEGSKKKGQKDVQKQLEDKLKDLIK"
BASE COUNT          233 a          523 c          603 g          294 t
ORIGIN      
        1 accgctattt aagcggcatg acctcgggaa gtcaaggcgc ggttagggcc cgggggccac
       61 aaaaagcgct tcacttgggg ggcacgaacc cctgggcgcc gccgaagagg aacttctgca
      121 tctcgccctc cagcatctcg cggtgcttgg ggttgaccgg ggtgaggcgg tactcgttga
      181 tcagcatggt ctgctggcgc agccacatct gccaggcctc cttcgagatg ctctcgaaga
      241 tgcgcttgcc gagttcgcct gggtagggct ggcgttcgag gccttcggcc tgcttgccga
      301 gcttggcgca ttggaccatg cgggtcatgg gtgttccctt tctggttgga ggccctggag
      361 caggcgtcgg atgggcgccg gcaggccgag ttgttcgcag tggtcggctt tataccaaac
      421 ggcgccgccc ggttccatga cggaaccact ctcctccacc cgcacccgca ggggggtaat
      481 gtccaggtgg aagtggctga aagtatgacg gaggccgggc cagggctcca cggccgcggc
      541 gcgggcgccc tggcgggcgc accaggcctc gagggtctcg ccggggtcca gttcggggag
      601 gctccagagg ccgccccaga tcccggttgg gggacggcgc cagagcagca cctcgccggc
      661 gggattggtg accacaagca gggtggcggt gcgcaccggg atggccttgc ggacctttgc
      721 ctccggaaag gcggtggggt tgcccgtggc gcgggcgcgg cagtcctctg ccacggggca
      781 ccggtcgcag gcggggcggc gcacggtgca gagggtggcc cccaggtcca tgatggcctg
      841 ggtgtagtcg gcgcagcggc tggcgggggt ccgctccagc gccatcgccc agaggcgccg
      901 ctccacctcg ctgcggccgg gccagccggc gaccgcctcg tggcgggtga ggacccgttt
      961 cacgttgccg tcgaggatcg gatggcgctg gccgagggcc tgcgacagga tggccccggc
     1021 ggtggagggc cccacccctt tcagcgccgt cacttcatcg agcgtttccg gaaaacggcc
     1081 gccgtggaga tcgcggatct gttgcgctgc cgcgtggagg ttgcgggcgc ggctgtagta
     1141 gccgaggccg ctccagaggg cgagaacgtc gtccacgggg gcgtcggcca gcgcggcggc
     1201 gtcggggaag cgcgccatga agcgctcgaa gtaggggatg accgtggcga cctgggtctg
     1261 ctgcaacatg atctccgaga cccacacccg gtagggggtg cggtcctgtt gccaggggag
     1321 atccttgcgg ccgtgccggt cgaaccaggc gaggaggcgt tcggcgaaac tcatctctat
     1381 ttgatcaagt ccttcaattt gtcttcgagc tgtttctgca cgtccttctg ccccttcttc
     1441 ttgcttcctt cgagctgccg ttgcagctcc tgttgcgccc gatcctggag cacggcgccc
     1501 acgtcgacgc cgaattgcgg atcggtaaag gtgccggtga tgcgcaccgg gatggtactc
     1561 cccttcagcc cggccagctc cggcgcggcc gataccacgc cagtgtcgac gcggtaatcg
     1621 atcttctcgt tgaccaggtt ggcggtcccc tcc
//
LOCUS       DATGWW010000397         2790 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_438533, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000397 DATGWW010000000
VERSION     DATGWW010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2790
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438533"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..945)
                     /locus_tag="VK150_05690"
     CDS             complement(<1..945)
                     /locus_tag="VK150_05690"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HLP30833.1"
                     /translation="MIPAATADAAPVRLAESGAPPMNVLYLTIGFPQPDTPSDLMHLM
                     EVFCGHGHTVDVVAVEERKRGQPTRVAQQGPFRVLRVRTGNIFDVGPYEKGLSLVTLP
                     WLLRRAMARHLPRRRYDLVIYAAPPVTFSRVVRGLKRRQPWVKTYLMLKDIFPQNAKD
                     LGIIRNPLVFAYFKRQERNLYATTDFIGCMSPANVAFLRQHSPEVPPERLEVLPNTRM
                     PGPDTGLAPAGPLRLRHGIPLDAVVALYGGNMGVPQGLDFLLEVFEANRERTDLHFLL
                     VGRGTERKRLAEAIAARGLRNVTQISHLPRLEYEALARE"
     gene            complement(945..2237)
                     /locus_tag="VK150_05695"
     CDS             complement(945..2237)
                     /locus_tag="VK150_05695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30834.1"
                     /translation="MFTSRVRNLGFWTSDLLQGAPIRKHCQDLEARLATGGASTDLLD
                     ALLHHAVEHTPFYAPFRGFASLQDFPVITKAVIKDQYEAFRSKAFAGQHLHVMRTSGS
                     TGTPFAVLQDPDKRRRVLAEMICFGKRAGYEVGDRFVFTRSWSTINRKRWHVALRENA
                     IMFDISSLDDARLESLRTLLRTDRDIRCMLGYPSTFGPLLRHLERSGEGPEAFRLRAI
                     ISISERLPKEMREALRARFGCTVVARYSNQENGVLAQQCPDGEEFHLNTASYAFEYLR
                     LDADAPTAPGELARVVITDLFNRAMPMIRYDTGDVAVRQTSASCGWATETLGELDGRR
                     QDFIRDTQDRLLSPAVVSTHFWRFTGLKQFQFIQEAKAQYRIILNGADPQYTDADFVA
                     MARRFLGPEADIAIEHVEEIPLLASGKHMPVVNRYRPA"
     gene            2311..>2790
                     /locus_tag="VK150_05700"
     CDS             2311..>2790
                     /locus_tag="VK150_05700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30835.1"
                     /translation="MFKLIRRGRRMGSAWRCSGGGMVGRPMVCALLVGLGTQGWGQGD
                     ASTRTFYVSPAGRDAWSGRLAAPNPERTDGPFASIPRARDAIRRLKERQPAPGPITVQ
                     VRGGQYFLDAPIRFGPEDSGTDQGVISYVAYPGEVPELIGGRRLAVGTLPAPGRPLTF
                     "
BASE COUNT          434 a          880 c         1014 g          462 t
ORIGIN      
        1 ctccctcgcc agggcctcgt attccaggcg ggggagatgg gaaatctggg tgacgttgcg
       61 gagccccctc gcggcgatgg cctccgcgag gcgcttgcgc tcggtgcccc gtcccacaag
      121 caggaagtgc aggtcggtcc gttcccggtt cgcctcgaag acctccagga ggaaatcgag
      181 gccctggggc acccccatgt tgccgccgta gagggccacg accgcgtcga ggggaatgcc
      241 gtggcgcaga cgcagagggc ctgcgggggc cagcccggtg tccggtccgg gcatgcgggt
      301 gttgggcagg acctccagcc gttccggggg gacttccggg ctgtgctggc gcaggaacgc
      361 cacgttggcg ggcgacatgc agccgataaa gtcggtggtg gcgtagaggt tgcgctcctg
      421 ccgcttgaag taggcgaaga ccagcgggtt gcggatgatc ccgaggtcct tggcattctg
      481 gggaaagatg tctttcagca tgaggtaggt cttcacccag ggctggcggc gcttcaggcc
      541 gcgaaccacg cgggagaagg tgacgggcgg ggccgcgtag atcaccaggt catagcggcg
      601 ccgcggcagg tgtctggcca tggcgcgccg cagcagccag ggcagggtga cgaggctcag
      661 gcccttctcg tagggcccca cgtcgaagat gtttcccgtg cggacccgca ggacgcggaa
      721 gggcccctgc tgcgcgaccc gggtgggctg gccccgtttc cgctcctcga cggccaccac
      781 gtccaccgtg tggccgtggc cgcagaacac ctccatgagg tgcatgaggt ccgagggggt
      841 gtcgggctgg gggaagccga tggtgaggta gagcacgttc atgggcgggg cgcccgattc
      901 cgccaggcgg accggggctg cgtcggcggt tgccgcagga atcatcaggc aggcctgtag
      961 cggttgacca ccggcatgtg cttgccggag gcgagcaggg gaatttcttc cacgtgctca
     1021 atggcgatgt cagcttcggg cccaaggaag cggcgggcca tggcgacgaa atccgcgtcc
     1081 gtgtactgcg ggtcggcgcc gttcaggatg atgcggtact gcgccttggc ctcctggatg
     1141 aactggaact gcttcagccc ggtgaagcgc cagaagtggg tggacacgac ggccggggaa
     1201 agcagccggt cctgggtgtc ccggatgaaa tcctggcgcc ggccgtccag ttcgccgagg
     1261 gtctctgtgg cccatccgca cgacgcggaa gtctgccgca cggccacgtc ccccgtatcg
     1321 taccggatca tcggcatcgc acggttgaag aggtcggtga tcaccacccg cgccagttcc
     1381 ccgggggcgg tcggcgcgtc cgcatcgagg cggaggtact cgaaggcata gctggcagtg
     1441 ttgaggtgga actcttcgcc atcaggacac tgctgggcga ggacgccgtt ttcctggttg
     1501 gagtacctcg ccaccaccgt gcatccgaac cgggcgcgca gcgcctcccg catctccttc
     1561 gggaggcgct ctgagatgct gatgatggcg cgcaggcgga aggcctcggg cccctcccct
     1621 gagcgttcga gatgtcggag gagcggaccg aacgtcgagg ggtagccgag catgcagcga
     1681 atgtcccggt cggtccggag caaagtccgc agggattcca gccgggcgtc gtcgagcgag
     1741 gagatgtcga acatgatggc gttttcccgc agggccacgt gccagcgctt gcggttgatg
     1801 gtgctccagc tgcgcgtgaa gacgaaccgg tcgcccacct cgtagccggc ccgcttgccg
     1861 aagcagatca tctccgcgag cacgcggcgg cgcttgtcgg gatcctgcag cacggcgaag
     1921 ggcgttccgg tcgagccgct cgttcgcatg acgtgcaggt gctggcccgc gaaggccttc
     1981 gaccggaagg cttcgtactg gtccttgatg acggccttgg tgatgaccgg aaaatcctgc
     2041 agggatgcga atccgcggaa cggggcgtag aagggcgtgt gctcgacggc gtggtggagc
     2101 agggcgtcca gcaggtcggt ggacgccccc cccgtggcca ggcgcgcctc aaggtcctgg
     2161 cagtgtttcc ggatgggcgc accctgcagc agatcgctcg tccagaagcc cagattccgt
     2221 acccgcgatg tgaacatcaa ccggcttcct tcatgactgt tcgtagtatg attgtgaaaa
     2281 taccgcagaa tctgtcaagg ataatccgaa atgttcaagc tcatccgaag gggccgacgc
     2341 atggggtcgg cttggcgctg ttcggggggc ggcatggtgg ggcggccgat ggtctgcgcg
     2401 ctcctcgtcg gtcttgggac gcagggctgg ggccaggggg acgcctccac gcgaaccttc
     2461 tacgtgtccc ccgccggtcg cgatgcctgg tccggccgcc tcgccgcgcc gaatcccgag
     2521 cgcaccgatg ggcccttcgc cagcattccc cgggcccggg acgccatccg caggctcaag
     2581 gagcgccagc cggcgccggg cccgatcacc gtgcaggtcc gcggcggcca gtatttcctc
     2641 gacgccccca tccgcttcgg ccccgaggat tcgggcaccg accagggcgt gatctcgtac
     2701 gtggcctatc ccggcgaggt gcccgagctg atcggcggtc gccggctggc ggtgggaacc
     2761 ctccccgcgc cggggcggcc cctgaccttc
//
LOCUS       DATGWW010000398         2021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_150947, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000398 DATGWW010000000
VERSION     DATGWW010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150947"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VK150_05705"
     CDS             <1..724
                     /locus_tag="VK150_05705"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HLP30836.1"
                     /translation="QRPAFLAMCALAAAAFGWWLLRLRVQQVEARSAVLDERNRMARE
                     IHDHLAQGFTGVLLQLEAAEARLSRMQGDPEPILTRLNHARNLAAVSLQEARRSVLAL
                     RPRKPEGADLLGGLRSLADRMLAGTDIQVELEQIGEPRPLRTRTEEELLRMAQEMLTN
                     ALRHGRARWVRVVLQFERRQVRLSIEDDGKGFDPSADAAGYGMRSIRESLKQLKGHLD
                     VDSSQGLGSRITITLPIRRWRT"
     gene            721..1365
                     /locus_tag="VK150_05710"
     CDS             721..1365
                     /locus_tag="VK150_05710"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLP30837.1"
                     /translation="MTTHSTERIRLLIVDDHPVVRDGLVAILHEGEPDLEVIGEAGDG
                     KEAVAAWRTLRPTVTIMDLQLPGQTGVMAIQAIRREDPDARILVLTTFDGDADIQRAL
                     EAGARGYLLKSVRRAILIEAVRAVAAGQRYLPPATAARLVEAMESERLTARELDVLRL
                     LAQGQRNREIADALGLAEPTVKIHVNNLLRKLQAKDRTEAAVIALKRGLIHLEP"
     gene            complement(1373..1702)
                     /locus_tag="VK150_05715"
     CDS             complement(1373..1702)
                     /locus_tag="VK150_05715"
                     /inference="COORDINATES: protein motif:HMM:NF016245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family protein"
                     /protein_id="HLP30838.1"
                     /translation="MRTVLLLVLSNIFMTFAWYGHLKHQRDSPLWAAILASWGIAFFE
                     YCLMVPANRIGFGRFSLPQLKVIQEVVTLLVFAVFAVAWMRERLNLNHLWAGLCLVGA
                     VFFTFRR"
     gene            complement(1702..>2021)
                     /locus_tag="VK150_05720"
     CDS             complement(1702..>2021)
                     /locus_tag="VK150_05720"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30839.1"
                     /translation="ARQALELKGFQVLEAEDGRRAVELVREHGPEVGVVLLDMTMPHM
                     DGEAAFREMRHLQPDLRVILSSGYNELEAMGRFMGKGLKGFIQKPYGPRDLLAKIQDV
                     LEG"
BASE COUNT          335 a          726 c          674 g          286 t
ORIGIN      
        1 ccagcggccg gccttcctcg ccatgtgcgc cctggccgcc gccgccttcg gctggtggct
       61 gctgcggctg cgggtgcagc aggtggaagc ccgctccgcc gtgctcgacg agcgcaaccg
      121 catggcccgg gagatccacg accacctggc tcagggcttc acgggggtgc tcctgcagct
      181 cgaggccgcc gaagccaggc tctcccgcat gcagggggac ccggagccga tcctgacccg
      241 cttgaatcat gcgcggaacc tcgcggccgt gagcctccag gaggcgagac ggtctgtcct
      301 ggcgctccgc ccccgcaagc ccgaaggcgc cgacctgctc ggtggcctgc ggtccctcgc
      361 cgaccggatg ctcgcgggga cggacatcca ggtggagctg gagcagatcg gcgagccacg
      421 cccccttcgc acccgtaccg aggaagagct gctgcgcatg gcccaggaga tgctcaccaa
      481 cgccctccgc catggacgcg cccgctgggt gcgggtggtg ctgcagttcg agcggcgcca
      541 ggtgcggctc agcatcgagg acgatggaaa gggcttcgat ccctccgccg acgcggcggg
      601 ctacggcatg cgcagcatcc gcgagagcct caagcagttg aagggccacc tggacgtgga
      661 cagcagccag gggctgggtt cccgcatcac catcaccctt cccatccgga ggtggcgcac
      721 atgaccacgc attcgaccga acggatccgc ctcctcatcg tggacgacca cccggtggtc
      781 cgcgatggcc tggtcgccat cctccatgaa ggcgagccgg atctggaagt gatcggcgag
      841 gccggcgacg gcaaggaggc cgtggccgcc tggcgcaccc tccgccccac ggtgaccatc
      901 atggacctgc agctccccgg ccagaccggg gtgatggcca tccaggccat ccgccgggag
      961 gatcccgacg cacggatcct cgtgctgacc accttcgacg gcgacgccga catccaacgc
     1021 gccctggagg ccggagcccg cggctacctg ctgaagagcg tgcggcgggc catcctcatc
     1081 gaggcggtcc gtgcggtggc cgccggccag cggtacctcc cccccgccac ggcggcgcgg
     1141 ctggtggagg ccatggaatc cgagcgcctt accgcccggg agcttgacgt gctgcgcctg
     1201 ctggcccagg gccagcggaa ccgcgagatc gccgacgcgc tgggcctcgc cgaaccgacg
     1261 gtgaagatcc atgtgaacaa cctgctgcgc aagctgcagg ccaaggaccg caccgaggcc
     1321 gcagtgatcg ccctcaagcg ggggctcatc cacctggagc cctgaggccc gcctagcgcc
     1381 tgaaggtgaa gaagaccgcc cccaccaggc agagcccggc ccacaggtgg ttgaggttca
     1441 accgttcgcg catccaggcc accgcgaaga ccgcgaacac gaggagggtc accacctcct
     1501 ggatcacttt cagctgcggc aggctgaacc gaccgaaccc gatgcggttg gcgggcacca
     1561 tgaggcagta ctcgaagaag gcgatgcccc agcttgcgag aatggccgcc cagagcgggc
     1621 tgtcgcgctg gtgcttcagg tgcccgtacc aggcgaaggt catgaagatg ttgctcagga
     1681 cgagcaggag aactgtccgc atcatccctc caggacatcc tggatcttgg ccagcaggtc
     1741 ccgcggcccg tacggtttct ggatgaagcc cttcaggccc ttgcccatga agcggcccat
     1801 ggcttccagc tcgttgtagc ccgagctgag gatcacgcgc aggtctggct gcaggtggcg
     1861 catctcccgg aaggcggctt cgccgtccat gtggggcatg gtcatgtcca gcaacaccac
     1921 ccccacctcc gggccgtgtt cccgcaccag ctccaccgcg cggcggccat cctcggcttc
     1981 gaggacctgg aagcccttga gctccagggc ctgcctggcc a
//
LOCUS       DATGWW010000399         3384 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_438616, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000399 DATGWW010000000
VERSION     DATGWW010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3384
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438616"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..655)
                     /locus_tag="VK150_05725"
     CDS             complement(<1..655)
                     /locus_tag="VK150_05725"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HLP30840.1"
                     /translation="MASTPTEPRASRFGFLDPLRGILALCVAVYHLSVWFDLSLSGSG
                     LNMATAKLGNFSVSAFFVLSGFVLFRTTPWERVQNEGPWRFWLRRFLRLAPVFYLVCL
                     LNVVFHLGMGPEPSARFILENLTLTFGAFHPNHALVTGGWYVGLVALLYFAYPALAWL
                     RAKGGLWFLTALALGLWLWSLPSTLHGVMDQERWNRFHTYVLAPNQLFLLAWGGLLAG
                     "
     gene            complement(773..2530)
                     /locus_tag="VK150_05730"
     CDS             complement(773..2530)
                     /locus_tag="VK150_05730"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: protein motif:HMM:NF010052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HLP30841.1"
                     /translation="MERFELIHEPSGRKRLAVPFRGARLLRNPMYTKGSAFTQEERHA
                     LGLEGLLPHAVTTMDQQARRVYASIQRKQDPLEKYIGLAALQDRNEHLFYRVLVDHIQ
                     EFLPIVYTPTVGKACQEFSHIFRRARGIWITPEHRGHVAEVLRNAPFEDIRLIVVTDN
                     ERILGLGDQGVGGMGIPIGKLALYTAAAGIPPWQTLPISLDVGTDNLDLLEDEFYLGW
                     RAPRLRGPEYDTLVDEFVHAVKAVFPKALLQWEDFKKFNAFRLMERYRKTITSFNDDI
                     QGTAAVGVAAMIAGSRATGIPIQEQKVLFLGSGAAGIGIARLVRETLKRSGLDGVALM
                     AATASLDIQGLLVDDDPGLDPLQKPFAWPAAWAEGMGLGRDQKRDLVSVIKAFKPTML
                     VGTSGTAGAFTEEAVREMAALRDRPVILPMSNPTSKCEAKPKDILAWTEGRALVATGS
                     PFDPVQFNGREIRIGQSNNVFIFPGVGLGVMVSESREVTDGMFAAAARQLAAEVRDED
                     LEAGSLFPSTSRIREVTAHVAEAVVKEARDSGVADRPLPDGDIAAAVAAAMWTPAYAP
                     ADPAPLANPAERNLVPALT"
     gene            complement(2770..>3384)
                     /locus_tag="VK150_05735"
     CDS             complement(2770..>3384)
                     /locus_tag="VK150_05735"
                     /inference="COORDINATES: protein motif:HMM:NF014788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HLP30842.1"
                     /translation="AEMPGVYAEGEVDVAGTIVGVVDEADLLPRLEAMAEGDVLIGLP
                     SSGLHTNGYSLARKVCFDLEKLGVNDPLPGTGKTVAEALLAIHRSYLAPVMPLVKAHQ
                     LVAMAHITGGGLTDNIPRVLPKTLDAEIDTASWQIPALFRFLMEKGGLGIEDARQALN
                     LGVGMVLVAKADRAEAVLAALHAAEEPAWVLGRLVAGTGSVVYR"
BASE COUNT          527 a         1171 c         1187 g          499 t
ORIGIN      
        1 gccccgccag caggccgccc caggccagga gaaagagctg gttcggcgcc agcacgtagg
       61 tgtggaagcg gttccagcgc tcctgatcca tgacgccatg cagggtcgag ggcaggctcc
      121 agagccagag cccaagcgcc agggcggtca agaaccagag tccgcccttc gcccgcagcc
      181 aggccagggc cgggtaggcg aagtagagca gggccaccag gcccacgtac cagccgccgg
      241 tcaccagggc gtggttgggg tggaaggccc cgaaggtgag cgtcaggttc tcgaggatga
      301 agcgggctga aggctcgggg cccatgccca ggtggaacac cacgttgagc aggcagacca
      361 ggtagaacac cggcgccagc cgcaggaagc gccgcagcca gaatcgccag ggaccctcgt
      421 tctgaacgcg ctcccagggc gtcgtgcgga agagcacgaa gccgctcagc acgaagaagg
      481 ccgacacgct gaagttcccc agcttggccg tggccatgtt caggcccgag cccgagaggg
      541 agaggtcgaa ccacacgctg aggtggtaca ccgccacgca cagcgcgagg atgccccgga
      601 ggggatccag aaagccgaag cgggaggcgc ggggttccgt gggcgtgctg gccaagtgcg
      661 tctctccctc cgacggggag agtggaacat ccttcggcgt ccctgcctac cggggacttc
      721 ctcccgcgcg gaaggaagcc cccgaatcgt cgccatccgc caccccgccg attcaggtca
      781 gggcaggcac caggttgcgt tcggccgggt tggcgagggg cgccgggtcc gccggcgcgt
      841 aggccggcgt ccacatcgcc gcggccaccg ccgccgcgat gtcgccatcc ggcagcggcc
      901 ggtcggccac gcccgaatcc cgggcctcct tcaccaccgc ttccgccacg tgggccgtga
      961 cttcgcggat ccggctcgtg gacgggaaca ggcttcccgc ctccagatcc tcgtcgcgga
     1021 cctccgccgc cagctgccgc gcggcggcgg cgaacatgcc atcggtgacc tcgcggcttt
     1081 cagagaccat cacgcccagg cccacgcccg ggaagatgaa cacgttgttg ctctgcccga
     1141 tgcggatctc gcggccgttg aactgcaccg ggtcgaaggg gctgcccgtg gccaccaggg
     1201 cccggccctc ggtccaagcg aggatgtctt tgggcttcgc ctcgcacttg ctcgtcgggt
     1261 tcgacatggg caggatcacc gggcggtccc tcagcgccgc catttcgcgg acggcctctt
     1321 ccgtgaaggc cccggcggtg cccgaggtgc ccacgagcat cgtgggcttg aaggccttga
     1381 tcacggacac caggtcgcgc ttctgatctc ggcccaggcc catgccctcg gcccaggccg
     1441 ccggccaggc gaagggcttc tgcagcggat cgaggcccgg atcgtcatcc accagcaggc
     1501 cctggatgtc caggctggcc gtggcggcca tgagggccac gccgtcgagg ccgctgcgct
     1561 tcagcgtctc gcgcaccagc cgggcgatgc cgatgcccgc cgcgcccgag ccgaggaaga
     1621 gcaccttctg ttcctggatg ggaatgcccg tcgcccggga gcccgcgatc atcgccgcca
     1681 cgcccacggc cgccgtgccc tggatgtcat cgttgaagct ggtgatggtc ttccggtagc
     1741 gctccatgag gcggaaggcg ttgaacttct tgaagtcctc ccactgcagc agggccttgg
     1801 gaaacacggc cttcaccgcg tggacgaact cgtcgaccag cgtgtcgtac tcggggccgc
     1861 gcagccgcgg ggcgcgccag cccaggtaga actcgtcttc cagcaggtcg aggttgtcgg
     1921 tgcccacgtc caggctgatg ggcagggtct gccagggcgg gatgcccgcg gcggcggtgt
     1981 agagcgccag cttgccgatg gggatgccca tgccgcccac gccctggtcg cccaggccga
     2041 ggatgcgctc gttgtccgtg acgacgatga ggcggatgtc ttcgaagggg gcgttccgca
     2101 gcacctcggc cacgtggccc cggtgctccg gcgtgatcca gatgccccgc gcccggcgga
     2161 agatgtggct gaactcctgg cacgccttgc cgacggtggg cgtgtagacg atgggcagga
     2221 actcctggat gtgatccacc agcacccggt agaacagatg ctcgttgcga tcctgcaggg
     2281 ccgccagccc gatgtacttc tccagcggat cctgcttgcg ctggatgctg gcgtagaccc
     2341 gccgggcctg ctggtccatg gtggtcacgg cgtggggcag caggccctcg aggccgagcg
     2401 cgtggcgctc ctcctgcgtg aaggcgctgc ccttcgtgta catgggattc cgcagcaggc
     2461 gggctccccg gaagggcacg gccagccgct tgcgcccgct gggttcgtgg atcagttcga
     2521 agcgttccat gaccggtacc tccctcgaca gacgggcatc caccccgcgg cggctgccgc
     2581 agggaacttg gcactcccct tcgcgttccg ttgcgcgaac ggacggacga ggggctcgga
     2641 aaccaagcaa cgagccaata tgcgtcgccg cgcagaggct gtccaccagc ggatccgcag
     2701 gtagtcaact ttccgcgcgg gatttgagac aggggatgcg gagagggcct gagcggcccg
     2761 cgtggtccgc taccggtaga ccaccgagcc cgtgcccgcc acgaggcggc ccagcaccca
     2821 ggcgggctcc tcggcggcat gcagcgcggc caggacggcc tccgcccggt cggccttcgc
     2881 caccagcacc atgcccacgc ccaggttcag cgcctggcgg gcatcctcga tgccgaggcc
     2941 gcccttctcc atgaggaagc ggaagagcgc cgggatctgc cagctggcgg tgtcgatttc
     3001 cgcgtcgagg gtcttgggca gcacgcgggg gatgttgtcc gtgaggccgc cgccggtgat
     3061 gtgggccatg gccaccagct ggtgcgcctt caccaggggc atgaccggcg ccaggtagct
     3121 gcggtggatg gccagcagcg cctccgccac ggtcttgccg gtgccgggca gtggatcgtt
     3181 cacgcccagc ttctccaggt cgaagcagac cttgcgggcc agggagtagc cgttggtgtg
     3241 caggcccgag ctgggcaggc cgatgagcac gtcgccttcg gccatggcct cgaggcgcgg
     3301 cagcaggtcc gcttcgtcga ccacgcccac gatggtgccg gccacatcca cctcgccctc
     3361 ggcgtagacg ccgggcatct cggc
//
LOCUS       DATGWW010000400         5258 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_303931, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000400 DATGWW010000000
VERSION     DATGWW010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5258
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303931"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..924)
                     /locus_tag="VK150_05740"
     CDS             complement(<1..924)
                     /locus_tag="VK150_05740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30843.1"
                     /translation="MYPGTYQTGDATLYKSPPGKLVVELMLAGNPSGPASAHYAPFTP
                     SGTTGQLAIGGTNVSSGAFVSALYHSDYQGTLTLSTAERTNVLPRSLLEGSGTTPTGW
                     TYYTDTGTSAPASSTWSPGDGAQAWTITSTTGQNFIYQNFSVAANTVYCLSVLVESVT
                     GSITAQNALYSGNFPAGASLEFPVCPANPSGGNFGIVQAGLLVALLRVAGTAGAATVY
                     LGVGCAASNTGTVKFSRPQIEVGTQRTGFIPTSATTASITDYSYNDSGAVTLGQTATG
                     AYSWSGSGLLASGGTTLTPTEGALTLAGQTPS"
     gene            complement(945..1733)
                     /locus_tag="VK150_05745"
     CDS             complement(945..1733)
                     /locus_tag="VK150_05745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30844.1"
                     /translation="MAAAIASGQRLPLYKASITAVANFYYTLWTAGGQPAAGGAVGNI
                     TTGVIPTDATTGAPVINAFTGANTGYLMTFDASSSVAGVLSVYDRLWHAGPFIGTTLH
                     TDTLSGQPTLTRVPNSDFSQLELWLEVTAVFAASATTVTVSYQDGNNTTQTATHTADL
                     ASLTGVPVNRMIPMRLANSTGIQKVNSVTIGGATNTTGQFNVIIQRNIVDHTVVSANI
                     GRPKKGPFETGMPIVYADSCLAMMWNATTTSTGTLFAEGVIGNG"
     gene            complement(1757..1957)
                     /locus_tag="VK150_05750"
     CDS             complement(1757..1957)
                     /locus_tag="VK150_05750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30845.1"
                     /translation="MVQRTIQIIGQDGETVLGELTIQDGGAAADLNIPRDWFTPESLD
                     DVATACTRMAQVIRQYQAEGGA"
     gene            complement(1967..2425)
                     /locus_tag="VK150_05755"
     CDS             complement(1967..2425)
                     /locus_tag="VK150_05755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30846.1"
                     /translation="MAAPGTVTLTQQARQWILDGTFDFDTMTVKAALLTSGWTPNMAT
                     NQLWADISANEVSSTNTGYTTGGNTLTGTGVSQTSGVGKFIGTIPSWTAGSAGLTART
                     CALYALGTLNGHVNPLIGYFLLDSAPADVVTATGNTLQINQPAAGWFTLT"
     gene            complement(2435..3829)
                     /locus_tag="VK150_05760"
     CDS             complement(2435..3829)
                     /locus_tag="VK150_05760"
                     /inference="COORDINATES: protein motif:HMM:NF024661.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4055 domain-containing protein"
                     /protein_id="HLP30847.1"
                     /translation="MPINTRHPSFAALQGDIVKMRDTTAGEDAVKAAKEKYLPRIGGH
                     DDTEYDAYRNRAMFYGATGRTLEALVGAVCRKAATLHGPEDWVKAYKEDVTGSGVSLN
                     SLVGEMVREILTTKMLGVLVDHNGTRPFICAYVAENVINILPDGTVVLAETEMVQSAE
                     DRYVLTPQTNYRELTPTPNGIQVDLWKQDSAGKLVVVDTRFLARRGDASVFRTAPFIL
                     AQIPGMPLLPLAQANLSHYRTTADLENGLHWGGIFTPWVSAQLDNTTVLKVGGSTAWL
                     LPTGSTVGMLEVKGDALAALETNKKAKEDLMASLGARLLVAQKKTAETEATARINAGG
                     EGATLSLTVDAVEAALTKALRLMAVWDGRSDADVESIRCEINRDFVDARLSAQDITAY
                     VGLYQSGAIDLETFLLILQGGEVLPDGRTPKDILALLDSQEPPMAGGTDPASGSTPEE
                     RLKARASARQTPTK"
     gene            complement(3829..4101)
                     /locus_tag="VK150_05765"
     CDS             complement(3829..4101)
                     /locus_tag="VK150_05765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30848.1"
                     /translation="MAPAEDRRGWHLNRGISVEAIVALLGLLAAGLSFAVHQDGRSTR
                     SEEQIKFLTETDQRHDKAIESLDLKTSKKLDRIEEKLDRVLENRRR"
     gene            complement(4101..4655)
                     /locus_tag="VK150_05770"
     CDS             complement(4101..4655)
                     /locus_tag="VK150_05770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30849.1"
                     /translation="MSINWKSAIGKVAPWLATTLGGPAAGLAVEGLCRVVGLEPSVEN
                     AQKVAEMAAAGQLTGDQFIALQKAEQEHREKMSAMGYQSLVDLERIAAGDRADARARE
                     VKTGDSWTPRILAGVVVVGWLLVTWFLLKHIVPAEGRDLVVRTLGTLDMAVGLVLGYY
                     FGSSASSKGKDELLYRATPAEGDK"
     gene            complement(4652..4837)
                     /locus_tag="VK150_05775"
     CDS             complement(4652..4837)
                     /locus_tag="VK150_05775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30850.1"
                     /translation="MPSFWHGLAALLAFAAMASYRIWFPRQPYVNRTARFLWWTGHLG
                     ALAGVLILLHAIIRSPR"
     gene            complement(4830..5030)
                     /locus_tag="VK150_05780"
     CDS             complement(4830..5030)
                     /locus_tag="VK150_05780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30851.1"
                     /translation="MPRLVFQVRDAEGAPQGGHVYEAPTGEALAASVASSPLPEGWTR
                     EEVADEAEIIAPPPVPVEVPNA"
     gene            complement(5023..>5258)
                     /locus_tag="VK150_05785"
     CDS             complement(5023..>5258)
                     /locus_tag="VK150_05785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30852.1"
                     /translation="VDIVPSNMSLAAAAAKLQADPAFMMLIDQLCVEGGCLHLGRPLP
                     RHEVRGDVTVNGVRRYPLLGVWSPGKPVAVARA"
BASE COUNT          778 a         1654 c         1882 g          944 t
ORIGIN      
        1 ggagggcgtc tgcccggcca gggtgagggc tccctcggta ggcgtcaggg tggtcccccc
       61 ggatgccagg aggccggacc cgctccagga gtatgccccc gtggccgtct ggcccagggt
      121 cacggccccg gaatcgttgt agctgtagtc cgtgatgctg gccgtggtgg cgctggtggg
      181 gatgaaaccg gtgcgctggg tcccgacctc gatctggggt cggctgaact tcacggtccc
      241 ggtgttgctg gcggcgcacc ccacgcccag gtagacggtt gcggcgcccg ccgtcccggc
      301 cacgcgaagc agggctacca gcagccctgc ctgaactatt ccaaagtttc ctccgctcgg
      361 gttcgcgggg cagaccggaa actcaaggga tgccccggct gggaagttcc cgctgtagag
      421 agcgttctgg gccgtgatgc tgccggtgac tgattccacc agcacggaca ggcagtagac
      481 ggtgttggcc gccacgctga agttctggta gatgaaattc tggccggtgg tgctggtgat
      541 ggtccacgcc tgggccccgt cgccagggga ccaggtgctg gatgcggggg cggaggtccc
      601 ggtgtcggtg tagtaggtcc agcccgtggg cgtggttccg gatccctcca ggaggctccg
      661 gggcagcacg ttggtcctct ccgcggtgct gagggtcagg gtgccctggt agtcggagtg
      721 gtagagggca gagacgaagg ccccactgga gacgttggtg cccccaatgg ccagctgccc
      781 cgtcgttccg ctgggggtga agggcgcata atgcgctgat gctggcccag aagggttccc
      841 tgccagcatg agttccacga ccaacttgcc aggcggcgac ttgtagaggg tcgcgtcccc
      901 ggtctgatag gtgccgggat acacccttcc ccagggcccg gacatcagcc gttaccgata
      961 acgccctcgg cgaagagggt gccggtggag gtggtcgtgg cgttccacat catggcgagg
     1021 caggagtccg cgtagacgat gggcattccg gtctcgaacg ggcccttctt gggccggccg
     1081 atgttcgcag aaacgaccgt gtggtccacg atgttccgct ggatgatgac gttgaactgg
     1141 ccggtggtgt tggtagcgcc cccgatggtg acggagttga ccttctggat gccggtggag
     1201 ttggcaagac gcatggggat catgcggttg accggaacac ctgtgaggct ggcgaggtcc
     1261 gccgtgtgag tagccgtctg ggtggtgttg ttgccgtcct ggtagctcac cgtcaccgta
     1321 gtcgcggagg ccgcgaagac cgccgtcacc tccagccaaa gttccagctg gctgaagtcg
     1381 ctgttgggga cacgggtgag ggtgggctgg ccagacaggg tgtcggtgtg cagcgtggtc
     1441 ccgatgaacg ggccggcatg ccacaggcga tcgtagacgg acagcacccc ggcaaccgag
     1501 gaactggcgt cgaaggtcat cagatacccc gtattggccc ctgtgaatgc attgatgact
     1561 ggggccccgg tggtggcgtc cgtcgggatg acgccagtgg tgatgttccc cacggcccct
     1621 ccggccgccg gttgcccacc agcagtccag agggtgtagt agaagttcgc cacggcggtg
     1681 atgctggcct tgtagagcgg gagcctctgc ccacttgcga tggctgcggc catcccatcc
     1741 atggtcgtga tagccatcac gcaccccctt cagcctgata ctgccggatg acctgggcca
     1801 tgcgggtgca ggcggtagca acatcgtcca gggattcggg cgtgaaccaa tcccggggga
     1861 tgttgaggtc agcagccgct ccaccgtcct ggatggtgag ttcgcctagg acagtttctc
     1921 catcttggcc gatgatctgg atcgttcgct ggaccacggc gacctcctag gtcagggtga
     1981 accagccggc ggccggctgg ttgatctgga gggtgttccc cgtggccgtg acaacgtcgg
     2041 cgggggcgct gtccaggagg aagtatccga tcagcgggtt cacatggcca ttgagggttc
     2101 ccagggcgta gagggcgcag gtgcgggccg tgaggccggc gctccccgcc gtccaggacg
     2161 gaatcgttcc gatgaatttc cccacgcccg aggtttggct cacgccggtg ccggtcaggg
     2221 tgttcccgcc ggtggtgtag ccggtattgg tgctggaaac ctcattggcg gaaatgtccg
     2281 cccagagctg gttggtcgcc atgttcggcg tccatcccga ggtaagcagg gccgccttca
     2341 cggtcatggt gtcgaagtcg aatgtcccgt ccaggatcca ctggcgggcc tgctgggtga
     2401 gggtgacggt gccgggagcg gccatggtgg tctcctattt ggtgggggtc tgtcgcgcgg
     2461 aggcgcgggc cttgaggcgt tcttcggggg tcgatccgga ggcgggatcc gtgcccccgg
     2521 ccatgggggg ctcctggctg tccagcaagg ccaggatgtc cttcggggtg cggccgtccg
     2581 ggagcacttc ccctccctgg aggatgagca ggaacgtctc caggtcgatg gccccggact
     2641 ggtagaggcc aacgtaggcg gtgatgtcct gggcgctgag gcgggcgtcc acgaagtcgc
     2701 ggttgatctc gcagcggatc gactccacgt ccgcatccga gcgcccgtcc caaaccgcca
     2761 tcaggcgcag ggccttcgtg agggcggcct caacggcgtc cacggtgagg gagagagtgg
     2821 cgccctcgcc cccggcattg atccgggccg tggcctcggt ctcggcggtc ttcttctggg
     2881 ccaccaggag ccgggccccc agggaggcca tgaggtcttc cttggccttc ttgttggtct
     2941 ccagggccgc cagggcatcg cccttgacct ccagcatgcc cacggtggat ccggtcggca
     3001 ggagccaggc cgtggagccc ccgaccttca ggacggtggt attgtccagc tgtgccgaga
     3061 cccagggcgt gaagatcccg ccccagtgga gcccgttctc caggtcagcc gtggtgcggt
     3121 agtggctcag gttggcctgg gccagaggga ggagaggcat gcctgggatc tgggccagga
     3181 tgaagggtgc cgtccggaaa acggacgcat cgccccggcg ggccaggaaa cgggtatcga
     3241 ccacgaccag cttgcccgct gagtcctgct tccagaggtc cacctggata ccgttgggcg
     3301 tgggggtgag ttcccggtag ttggtctggg gcgtgaggac gtagcgatcc tccgcgctct
     3361 gcaccatctc cgtctcggcc aggaccacgg ttccgtccgg gaggatgttg atcacgttct
     3421 cggccacgta ggcgcagatg aacggccggg tcccattgtg gtccaccagg acgcccaaca
     3481 tcttcgtggt gaggatctcg cgcaccatct ccccgaccag ggagttgagc gagacgccgc
     3541 tcccggtcac gtcctccttg taggccttga cccagtcctc gggcccatgg agggttgcgg
     3601 ccttgcggca caccgcgccc accagggcct ccagggtgcg cccggtggcc ccgtagaaca
     3661 tcgcccggtt gcggtaggcg tcgtattcgg tgtcatcgtg gccgccgatc cgggggaggt
     3721 atttctcctt cgcggccttg acggcatcct cgcccgccgt ggtgtcgcgc atcttcacga
     3781 tgtcgccctg gagcgccgcg aacgagggat ggcgcgtgtt gatgggcatc agcgcctccg
     3841 gttctcaagc acccggtcca acttctcctc gatgcggtcc agcttcttgc tcgtcttcag
     3901 gtccaggctc tcgatggcct tgtcatggcg ctggtcggtc tccgtgagga acttgatctg
     3961 ctcttcggac ctggtgctcc tcccgtcctg gtggacggcg aagctcaggc ccgcggccag
     4021 gaggccgagg agggcgacga tcgcctccac gctgatgccc cggttcaggt gccaccccct
     4081 gcgatcctcc gccggggcca ttacttgtcc ccttcggcgg gcgtggcccg gtagagcagc
     4141 tcgtccttgc ccttgctgga ggcgctggag ccgaagtagt agcccaggac gaggcccacg
     4201 gccatgtcca gcgtcccgag ggtgcgcacc acgaggtcac gtccctcggc agggacgatg
     4261 tgcttgagca ggaaccaggt caccagcagc caaccgacca cgaccacccc ggccaggatc
     4321 ctgggcgtcc aggaatcccc cgtcttgacc tcccgggccc gagcatcggc gcggtcccct
     4381 gcggcgatcc gctccaggtc cacgaggctc tggtagccca tggcgctcat cttctcccgg
     4441 tgctcctgct cggccttctg gagggcgatg aactggtccc cggtgagctg gcctgcggcg
     4501 gccatctcgg cgactttctg ggcgttctcc acgctgggct caaggcccac cacgcggcac
     4561 agcccctcta cggcaaggcc cgcggcaggt ccccccagtg tggtggccag ccacggggct
     4621 acctttccga ttgcggattt ccagttgatg ctcatcgggg gctcctgatg atggcgtgga
     4681 ggaggatgag caccccggcg agggcgccca gatggcccgt ccaccagagg aatcgggccg
     4741 tgcggttgac gtagggctgg cgggggaacc agatgcggta gctggccatg gcggcaaagg
     4801 cgaggagggc ggccaggccg tgccagaagc taggcattgg gcacctccac ggggacagga
     4861 ggcggggcga tgatctcggc ctcgtcagcg acctcctccc gggtccagcc ctcggggagg
     4921 ggggacgagg cgacggaggc ggccagggcc tcccctgtgg gggcctcgta gacgtgcccg
     4981 ccctggggcg cgccctcggc gtcccggacc tggaagacca gcctaggcac gggccaccgc
     5041 cacgggcttg ccggggctcc agacgcccag gagggggtag cggcgcaccc cgttgaccgt
     5101 cacgtccccg cgcacctcat ggcggggcag agggcgtccc aggtggaggc acccgccctc
     5161 aacacacagc tggtcgatga gcatcatgaa ggcgggatcc gcctggagtt tcgcggcggc
     5221 ggcggccagg ctcatattgc tgggcacgat gtccacgg
//
LOCUS       DATGWW010000401         1653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_29723, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000401 DATGWW010000000
VERSION     DATGWW010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29723"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            242..1096
                     /locus_tag="VK150_05790"
     CDS             242..1096
                     /locus_tag="VK150_05790"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HLP30853.1"
                     /translation="MLRSALIFLLAPASILMAAGTPRASRVSMKPGATYLYTYYDKQG
                     RLVINNLPPSYMKGQGLVLKHVGVGKVRLAVTPAEMAKALKSPELIALVDEIAQLEGV
                     DQHLARAIIQAESAFNYKARSKAGALGLMQLMPSTAERFGVLDPFDPRQNISGGVKYL
                     KWLHGYYEGDLTKVVAAYNAGEGAVNRHKGIPPFRETRAYVPKVLDLYHRKAVQPDPK
                     LAGSMALLQKGRGGFKVEEEKTVPEPTPQQRAATRIYQWTDTNGRIQISDQPPPKGTP
                     GVKPFGAP"
     gene            complement(1103..1588)
                     /locus_tag="VK150_05795"
     CDS             complement(1103..1588)
                     /locus_tag="VK150_05795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30854.1"
                     /translation="MADGVLWLFVVNLGLACGAGLYEARVAVPLWFTPAAGGESRWDA
                     GAARRADVGRRFWVHLTTLPLTALTLASLTLAWRMPPPVRAWWLGAAVAALVDRGLTF
                     AYFLPVMVRLMDVEKGEAPGATARARRWARLGHLRQVMTLTAWLAALVALYRLGGIPP
                     R"
BASE COUNT          288 a          599 c          557 g          209 t
ORIGIN      
        1 caaggtgtgc agcctcggcc agatcagcca ggccctctac gaggtgggcg ggcagtaccg
       61 gcggaacatg taggtggaga tgcgccatct ctggcaggcc atcgattgga gtttttccaa
      121 gcagccacgg ggcggggccg ccggtccagc gccggcctgt ggttgcgcgg ggctttcccg
      181 accggccgcc ctcaccagaa cccgctgggc tgccgatgac atggctctat catggagttc
      241 catgctgcgt tctgcgctga tcttcctgct cgccccggcc tcgatcctga tggcggcggg
      301 gacgccgcgg gcctcgcggg tctcgatgaa gcccggcgcc acttacctct acacctacta
      361 cgacaagcag ggccggctgg tgatcaacaa cctgcccccc agctacatga aggggcaggg
      421 cctggtgctg aagcacgtgg gcgtgggcaa ggtgcgtctc gcggtgaccc ccgcggagat
      481 ggcgaaggcc ctcaagagcc ccgagctcat cgccctggtc gacgagatcg cgcagctcga
      541 aggagtagac cagcacctgg cccgggccat catccaggcg gagagcgcct tcaactacaa
      601 ggcccgctcc aaggccgggg ccctggggct catgcagctc atgccttcca ccgccgagcg
      661 cttcggcgtg ctggatccct tcgatccccg ccagaacatc agcggcggcg tgaagtacct
      721 gaagtggctc cacggctact acgagggcga cctcaccaag gtggtggccg cctacaacgc
      781 aggtgaaggc gccgtgaacc ggcacaaggg gatcccgccc tttcgcgaga cccgggccta
      841 cgtgcccaag gtgctcgacc tctaccaccg caaggccgtg caacccgatc ccaagctcgc
      901 gggcagcatg gcgctgctgc agaaggggcg cggcggcttc aaggtggaag aagagaagac
      961 cgtgcccgaa cccacgccgc agcagcgggc cgcgacgcgg atctaccagt ggaccgacac
     1021 caacggccgc atccagatca gcgatcagcc cccacccaaa ggcacgccgg gcgtgaagcc
     1081 cttcggagcg ccctgacctc cgctaccgcg gcgggatccc gccgaggcgg tagagcgcca
     1141 ccagggcggc cagccaggcc gtcagggtca tcacctgtcg gaggtgcccc aggcgcgccc
     1201 agcgccgggc ccgggccgtg gctccaggcg cctcgccctt ctcgacatcc atgagccgca
     1261 ccatgacggg caggaagtag gcgaaggtca ggccccggtc cacgagcgcg gccacggcgg
     1321 cgcccagcca ccaagcgcgc acggggggcg gcatccgcca cgcgagcgtc aggctggcca
     1381 gcgtgagggc cgtcaggggc agggtggtca ggtggaccca gaacctcctt cccacgtccg
     1441 cgcggcgggc ggcaccggca tcccagcggg attcaccgcc ggccgccggc gtgaaccaga
     1501 gcggcaccgc gacccgggct tcatagagcc ccgcgccgca ggccaggccg aggttgacca
     1561 cgaacagcca gagcacccca tcagccatcg cgcccttcct ccggctccgc caggacgggg
     1621 cggaccatcc agtctggcgc agcccgcagg cgg
//
LOCUS       DATGWW010000402         3646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_304014, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000402 DATGWW010000000
VERSION     DATGWW010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3646
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304014"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VK150_05800"
     CDS             <1..200
                     /locus_tag="VK150_05800"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30855.1"
                     /translation="EATRCLRDPAAGALDPRVRVVALTANAMAGDRERCLAAGMDDYL
                     PKPVQMQALAAVLAKGAAPPG"
     gene            complement(222..779)
                     /locus_tag="VK150_05805"
     CDS             complement(222..779)
                     /locus_tag="VK150_05805"
                     /inference="COORDINATES: protein motif:HMM:NF020295.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HLP30856.1"
                     /translation="MPKIAEIEYTPNPNAVKFVLKEAVAVGFPKSFPNAETAEHDELA
                     KHLFAVGNVTSVFMQDKFLTVTKTDDKGWPEMLPLLAAPIRAAAGIGGATGAPAAPRV
                     FSKVEDENDPLLKDIRMVLESAILPALAADGGGLELVGRHEKQVMIRYVGACGSCPAS
                     LTGTLVAIEGMLQKEVDPELVVISV"
     gene            complement(868..1317)
                     /locus_tag="VK150_05810"
     CDS             complement(868..1317)
                     /locus_tag="VK150_05810"
                     /inference="COORDINATES: protein motif:HMM:TIGR01994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HLP30857.1"
                     /translation="MSDPRELYQQVILEHNKKPRNFGKLEACTHHAEGHNPLCGDQLD
                     VTLVIEDGLVRDIKFQGSGCAIDVASASLMTGAVKGKSVAEAEAMAEQFRGMVRGELN
                     PETEAPLLGKLTLFSGVKNLPSRVKCAVLPWATLHAALKGQAEASTE"
     gene            complement(1430..2665)
                     /locus_tag="VK150_05815"
     CDS             complement(1430..2665)
                     /locus_tag="VK150_05815"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0006534 - cysteine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HLP30858.1"
                     /translation="MSTTLQPLDVTAVRRDFPLLSRVFHGKPVIYLDSAVSGQMPLSV
                     IERMAKYERDEHTNVHRGVSTLSQEATDHFEAAREKVRRYIGAGSIREIVWTRGTTEA
                     INLVAQTYGRTHVNAGDEILLSAMEHHANIVPWQLLAEEKGATLKVIPMTDAGELILE
                     SLDTLITDRTKLVGVVHVSNVLGTVNPVKEIIARAHAKGVPVLVDGAQAVPHLAVDVQ
                     DLDADFYAFSGHKLSGPTGIGVLYGKLAHLEAMPPWHGGGNMIRSVSWEKTTYMAAPG
                     KFEAGTPPIAAAIGLGAALDYVTALGLECIAAHEHDLLVYATERLSAIPRLRILGNAK
                     DKASVISFVVEGIHPHDMGSLLDGEGIVVRAGHHCAQPVMTRFNVPATTRASFAYFNT
                     REEVDLLATAVLHAIELFK"
     gene            complement(2758..>3646)
                     /gene="sufD"
                     /locus_tag="VK150_05820"
     CDS             complement(2758..>3646)
                     /gene="sufD"
                     /locus_tag="VK150_05820"
                     /inference="COORDINATES: protein motif:HMM:TIGR01981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HLP30859.1"
                     /translation="EDLNSARFQDGAVILVPKNLKVALPLHLLFITKAETPIAVFPRL
                     MVVLERGAELELVEEHHGEGTYLTAPVIEARIAEGAILRHERVQRDSAGAFHLGTLKA
                     EVAKGGQYHSRTLSFGARLSRQQPWVRLAEGAEASLDGLALLEGSQVADTHSFMFHAE
                     PHGTSHQLHKCIVDGQARAIFNGQVLVAPRAQGTDAKQQSRNLLLSESARVDTKPQLE
                     IYADDVKCSHGATVGALDPEELFYLQSRGLNADDARNLLTYGFAADVLTHVPVASLRR
                     ALRQLVMARTQAVSLGDLS"
BASE COUNT          541 a         1113 c         1330 g          662 t
ORIGIN      
        1 ttgaggccac gcggtgcctg agggatcccg ccgccggcgc gctggaccct cgcgtgcggg
       61 tggtcgcgct cacggcgaac gccatggcgg gagatcgaga gcgctgcctc gccgccggga
      121 tggatgacta cctccccaag cccgtgcaga tgcaggccct ggcggccgtg ctggcgaagg
      181 gcgccgcgcc tcccggctga gctggccagg cgaaaggccg atcagacgct gatcaccacg
      241 agctcgggat ccacttcctt ctgaagcatg ccctcgatgg ccacaagggt gcccgtgagg
      301 ctggcggggc agctgccgca ggcgcccacg tagcggatca tcacctgctt ctcgtgccgg
      361 cccaccagct ccaggccgcc gccatccgcc gccagggcag gcaggatggc gctctccagc
      421 accatgcgga tgtctttcag caggggatcg ttctcgtctt ccaccttgga gaacacccgg
      481 ggggccgccg gggcgcccgt ggcgccgccg atgccggcgg cggcccggat gggcgcggcc
      541 agcaggggca gcatctccgg ccagcccttg tcgtcggtct tggtgacggt gaggaacttg
      601 tcctgcatga agaccgaggt gacattcccc acggcaaaga ggtgcttcgc cagctcgtca
      661 tgctcggcgg tctcggcatt ggggaaggac ttggggaagc ccacggccac ggcttccttc
      721 agcacgaact tcacggcgtt gggattgggg gtgtattcga tctcggcgat tttgggcatt
      781 ttcaaaagcc ttttttgtcc acagattccg cagattcaca cagatttctt tgaatctgtg
      841 aaatctgtga aatctgtgga taggttttca ttctgtggat gcctcggcct gacctttgag
      901 cgcggcgtgg agggtggccc aggggagcac ggcgcacttc acgcggctgg ggaggttctt
      961 cacgccgctg aagagggtga gcttgcccag caggggggct tccgtctcgg gattgagctc
     1021 gccgcgcacc atgcctcgga actgctcggc catggcctcg gcttcggcca cggacttgcc
     1081 cttcaccgcg cccgtcatga ggctggcgct ggcgacatca atggcgcagc cgctgccctg
     1141 gaacttgatg tcccgaacca ggccgtcctc gatcaccagc gtcacatcca gctggtcgcc
     1201 gcagagagga ttgtggcctt cggcgtggtg ggtgcaggcc tccagcttcc cgaagttccg
     1261 gggcttcttg ttgtgctcca ggatcacctg ctggtacagc tcgcgtgggt cgctcattgg
     1321 tcgtatccaa cagacaaaag attcaccgcc aagacgccaa gacgccaaga aaaaccaaga
     1381 agagcttttt tctttcttgg cgtcttggcg tcttggtggt aatccgtttt catttgaaca
     1441 actcgatggc atgaagcacg gcggtggcca gcaggtccac ttcttcgcgg gtgttgaagt
     1501 aggcgaagga ggcccgggtg gtggcgggga cgttgaagcg ggtcatgacg ggctgggcgc
     1561 agtggtggcc ggcgcggacc acgatgcctt cgccatccag gaggctgccc atgtcgtggg
     1621 gatggatgcc ctccaccacg aaggagatga cgctggcttt gtctttcgcg ttgcccagga
     1681 tgcgcaggcg cggaatggcg gaaaggcgct cggtggcgta gaccagcagg tcgtgctcgt
     1741 gggccgcgat gcactccagc cccagggcgg tgacgtagtc cagggccgcg cccaggccga
     1801 tggcggcggc gatgggcggg gtgcccgcct cgaacttgcc cggcgcggcc atgtacgtgg
     1861 tcttctccca gctgacggag cggatcatgt tgccgccgcc gtgccagggg ggcatggcct
     1921 ccaggtgggc cagcttgccg tagagcacgc cgatgcccgt ggggcccgag agcttgtggc
     1981 cgctgaaggc gtagaagtcc gcgtcgaggt cctgcacgtc cacggcgagg tggggcacgg
     2041 cctgggcgcc atccaccagc acgggaacgc ccttggcgtg ggccctggcg atgatctcct
     2101 tcaccgggtt cacggtgccc agcacgttgc tgacatgcac gacgccgacg agcttggtgc
     2161 ggtccgtgat gagtgtgtcg agagattcca ggatcagctc gcccgcatcg gtcatgggaa
     2221 tgaccttgag ggtggcgccc ttctcctcag ccagcagctg ccagggcacg atgttggcgt
     2281 ggtgctccat ggccgacagc aggatctcgt cgccggcgtt cacatgggtg cggccgtagg
     2341 tctgagccac gaggttgatg gcctcggtgg tgccgcgggt ccagacgatc tcgcggatgg
     2401 acccggcgcc gatgtagcgg cgcacctttt cacgggcggc ctcgaagtgg tcggtggcct
     2461 cctggctgag ggtgctcacg ccgcggtgga cattggtgtg ctcgtcgcgc tcgtacttcg
     2521 ccatgcgctc gatgaccgac aggggcatct ggccgctcac ggcgctgtcg aggtagatca
     2581 cgggcttgcc gtggaacacc cgggacagca gggggaaatc ccggcggacg gcggtgacgt
     2641 cgaggggctg gagggtggtg ctcatgacag gcgcgatggc agggctttgc cctggcaccg
     2701 tgcggggggt cccggggggg acatcgcgag tgatggcgag caggcggtcc ccctcggtca
     2761 tgataagtct cccagcgaga cggcctgggt gcgcgccatg acgagctggc ggagggcgcg
     2821 gcgcaggctg gccacgggga cgtgggtgag cacgtccgcc gcgaagccgt aggtgagcag
     2881 gttgcgggcg tcgtcggcgt tcaggccgcg gctctgcagg tagaagagct cctcgggatc
     2941 cagcgcgccc acggtggcgc cgtggctgca cttcacgtcg tcggcgtaga tctccagctg
     3001 gggcttggtg tcgacccggg cgctttccga gagcaggagg ttgcggctct gctgcttggc
     3061 gtccgtgccc tgggcgcggg gcgccacgag cacctggccg ttgaagatgg cgcgggcctg
     3121 gccgtccacg atgcacttgt gcagctggtg gctggtgccg tggggctcgg cgtggaacat
     3181 gaagctgtgt gtgtccgcca cctggctgcc ttcgaggagg gccagtccgt ccaaggatgc
     3241 ctcggcccct tcggccaggc gcacccaggg ctgctggcgg gagaggcgcg cgccgaagct
     3301 gagggtgcgg gagtggtact ggccgccctt ggcgacctca gccttcaggg tgcccaggtg
     3361 gaaggccccg gcgctgtcgc gctgcacccg ttcatggcgc aggatggccc cctcggcgat
     3421 gcgggcctcg atcaccgggg cggtcaggta ggtgccctcg ccgtggtgct cttcgaccag
     3481 ttccagctcg gccccgcgtt ccagcaccac catgaggcgg gggaagacgg cgatgggggt
     3541 ttcggccttg gtgatgaaca gcaggtggag gggcagggcc accttgaggt tcttgggcac
     3601 gaggatgacg gcgccatcct ggaagcgggc gctgttcagg tcctcg
//
LOCUS       DATGWW010000403         2262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_151102, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000403 DATGWW010000000
VERSION     DATGWW010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151102"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1942)
                     /locus_tag="VK150_05825"
     CDS             complement(<1..1942)
                     /locus_tag="VK150_05825"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP30860.1"
                     /translation="MDQSFDDVWAECEDLFVQARQTLAVLKESPPAHVVQASVNALFR
                     TTHTLKGMAGMLGYASFSRAAHRMEDIFDLMRKGRLRSTDSLIETLEAGILALESGLA
                     GIRRGRPEPDDYLHALRRELGELEALARPTEGGAQDLTSMLDLPPDTLKALSEYERTR
                     VTALLLSGMPIHGVMVCLDFATFDERLRALSEVLGAQGELLSTLPWDVPEDREGLAFL
                     LMVACPAVDPASLPLLEGELTGVALLADPARIPASLRTPEPEAAEVPVAPEPQAPSAP
                     PAPQPAAEVEILRLPAHRVEALEARLMAVGQLRDAASQLLRQAKHIDRERPLALLGDV
                     EEGLLEVQKSLLQMRMVKVETLFSRIEPLVKGLSRDTGKPVKLTFQGGDLEVERSLLG
                     RLSEPFLHLVRNALDHGLELPSERAAQGKSETGSLKISASQRGRNLRFDIRDDGRGFD
                     LARIEARGLELGLLAKGQPHTPERLHRLTLEPGFSTQERASQLSGRGVGMDVVRAEID
                     ALGGEVHLSSEPRRGSLIRLSIPLSRAVVSCLRVRCAGQMFGVPLNSVLRVQAGKEPL
                     HGGDQVDVLGMSTPLESLQTCLGLPDPDGQKAFVVLTQPGAASRSVAIAIGVDEIVGR
                     GEVLLRSLPELAHSPGIMGGSLQ"
     gene            2025..>2262
                     /locus_tag="VK150_05830"
     CDS             2025..>2262
                     /locus_tag="VK150_05830"
                     /inference="COORDINATES: protein motif:HMM:NF014409.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HLP30861.1"
                     /translation="MRTLAVLPSRFQASRFPGKPLVLIAGKPMIQWVFEAAGQAAGVD
                     RVVVATDDDRIASAVRAFGGEAVMTDPALPSGTDR"
BASE COUNT          326 a          799 c          800 g          337 t
ORIGIN      
        1 cctggaggct gccgcccatg atgcccggcg agtgggccag ttcaggcagg ctccgcagca
       61 ggacctcgcc ccggccgacg atctcgtcca cgccgatggc gatcgccacg ctgcgcgagg
      121 ccgcccccgg ctgcgtcagc accacgaagg ccttctgacc gtcggggtcg ggaagcccaa
      181 ggcaggtctg gagggactcc agcggggtgg acatgcccag cacatccacc tggtcgccgc
      241 catggagggg ctccttgccc gcctgcacac gcagcacgct gttgagcgga acgccaaaca
      301 tctgtccggc gcagcggacc cgcaggcagc tcaccaccgc ccggctgagg gggatgctca
      361 ggcggatgag gctgccgcgc cggggttcgc tggacaggtg gacctctccg ccaagcgcat
      421 cgatctccgc ccgcaccacg tccatgccca cgccgcgccc cgaaagctgt gaggcccgct
      481 cctgggtcga gaatcccggc tccagcgtga gccggtgcag ccgttcgggc gtgtggggct
      541 ggcccttcgc cagcaggccc agctcaaggc cccgggcctc gatccgcgcc aggtcgaagc
      601 cgcggccgtc gtcgcggatg tcgaagcgga ggttccggcc acgctgcgag gcggagatct
      661 tcagcgaccc ggtttcgctc ttgccctggg ctgcgcgctc ggatggcagc tccaggccat
      721 ggtccagcgc attgcggacc aggtgcagga agggttcgga gagacggccc aaaaggctgc
      781 gctccacctc caggtcccct ccctggaagg tgagcttcac gggtttcccc gtgtcccggc
      841 tgaggccttt caccagtggc tcgatgcggg agaagagcgt ttccaccttg accatccgca
      901 tctgcaggag ggatttctgg acctcgagca gaccctcctc cacatccccg agcaaggcca
      961 gggggcgctc ccggtcgatg tgcttggcct ggcgcaggag ctggctggcc gcgtcccgga
     1021 gctggccgac ggccatgagc cgggcctcca gggcttccac gcggtgggcc ggcaggcgga
     1081 ggatctccac ttccgccgcc ggctgggggg ccgggggtgc acttggcgcc tgaggttccg
     1141 gagccacggg aacctcggcg gcctccggtt ccggcgtccg gaggctggcg ggtatccggg
     1201 ccgggtcggc cagcagggcc acgcccgtca actcgccctc cagcagcggc aggctggccg
     1261 gatccaccgc ggggcaggcg accatgagca ggaaggcgag accctcccgg tcctcgggca
     1321 cgtcccaggg cagggtggac agcagttccc cctgggcgcc cagcacctcg ctgagcgcgc
     1381 gcagccgttc gtcgaaggtg gcgaaatcca ggcagaccat gaccccgtgg atgggcatgc
     1441 cgctcagcag cagggccgtc acccgggtgc gctcgtactc cgacagggct ttcagcgtgt
     1501 ccggcggcag gtcgagcatg gaggtcaggt cctgggcgcc cccctctgtc gggcgggcca
     1561 gggcctcaag ttcgcccagt tcccgcctca gggcgtgcag gtagtcgtcc ggctcggggc
     1621 ggccgcgccg gatgccggcc aggcctgatt cgagggccag gatgcccgcc tcgagtgtct
     1681 cgatcaggga atccgtggaa cgcaggcgcc ctttccgcat gaggtcgaaa atgtcctcca
     1741 tgcggtgggc cgcccggctg aagctggcgt agccgagcat cccggccatg cccttgaggg
     1801 tgtgcgtcgt ccggaagagc gcgttcaccg aggcctgcac cacgtgggcg ggcgggctct
     1861 ccttcagcac ggcgagggtc tgccgggcct gcacgaacag gtcctcgcat tcagcccaga
     1921 cgtcgtcgaa agattgatcc aagtgcagct cccggttcca ggcccatcgg cagggggccg
     1981 gacagtctgg agtctggagt ctggggctgc cttacactgg gcccatgcgc accctcgccg
     2041 tcctgccctc ccggttccag gcctcccgct tcccaggcaa gcccctggtc ctcatcgcgg
     2101 gaaaacccat gatccagtgg gtcttcgaag cggccggcca ggcagccggc gtggaccggg
     2161 tggtggtggc cacggacgac gatcgcatcg cctcggcggt gcgggccttc ggcggggagg
     2221 cggtgatgac cgatcccgcc ctgccctcgg gcaccgaccg ca
//
LOCUS       DATGWW010000404         3806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_304319, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000404 DATGWW010000000
VERSION     DATGWW010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3806
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304319"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..618
                     /locus_tag="VK150_05835"
     CDS             <1..618
                     /locus_tag="VK150_05835"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HLP30862.1"
                     /translation="GWVLAFSGVGLALNLLATFVLVPRDRSLLERDANLRAAYLHAFA
                     DSLTSVSLVASMVLIRFTGWRWVDPAIALVILVVILRGAMLLLRDAVGILMHRAAFEH
                     EAVKAELLALPGVLGVEDFRSWKMCSHLTIATAHIIVAADRLADTEDHLADIERLLWE
                     RHGVRHLTVHFETPDMAGRHHHRFLHHHEAETHDHNHEQDHAGHD"
     gene            complement(661..1704)
                     /locus_tag="VK150_05840"
     CDS             complement(661..1704)
                     /locus_tag="VK150_05840"
                     /inference="COORDINATES: protein motif:HMM:NF024813.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HLP30863.1"
                     /translation="MGLMDWGKAQFLDILEWLDDSTDTLAWRFPMRGQEIQNGGQLVV
                     RESQEAVFVNEGQMADVFKPGTHRLTTQNLPILATLKGWKYGFESPFKSDVYFISTKL
                     YNDLKWGTSNPIMMRDADFGMLRIRAFGIYSIKVVDSATFLRQLVGTNGVYTVPDISE
                     QLRKTIMSRFTDALGEAKIPALDLAAKYDEISEFVKQKLQEEFKTMGLELSKFFVENI
                     SLPEEVEAMMDKRTGVGMMAPVMGAYTQMQVADSIPLAAQNPGGVAGMGMGVGLGFGM
                     GNMMGQQMAGAAQTMGQQGFPAGNAPAAAAPAKSLKEELTDLKELFDGQLINQAEYDA
                     QRAVIMKKHGMGN"
     gene            complement(1821..2162)
                     /locus_tag="VK150_05845"
     CDS             complement(1821..2162)
                     /locus_tag="VK150_05845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30864.1"
                     /translation="MRVRTALLALLLPAAVLHAGKPAARKHAAGPVRSAGEAKAIAER
                     ETGGRAIHARRISLNGASGGWEVDVRMPGGEKGWRCVIDSDTRMVHTKTRLEAPGGKA
                     DGPVRRIQGSR"
     gene            complement(2237..3292)
                     /locus_tag="VK150_05850"
     CDS             complement(2237..3292)
                     /locus_tag="VK150_05850"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: protein motif:HMM:NF020134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HLP30865.1"
                     /translation="MRSVITGTGIGLPRHVVTNQDLARLMDTSDEWIRVRSGIQERRY
                     AEPGQGSTDLGAIASRGALADAGLTPADIDAVIFATMTPDHLLPGNGPLLQVALGLRD
                     IPTFDIRQQCSGFLYGLELADLLLQSGRYRRVLLVGAEAHTPFMPWHLAWDTLVGQST
                     REITEAERAENTLSRDRTVLFGDGAGAVVIEAREGTQGLGPIQLHTDGSGASVLTMTG
                     VSFKRRPFVTHAQIQAGETIPVMSGKEVFKAAVTLMPQAVREVCAMANLEVADLDLLL
                     IHQANLRIIEGVQKALGLPAGKVPHNIERYGNTTAATLPILFHECRAQGLVKPGMTVA
                     FTALGSGLHWGAALYRS"
     gene            3572..>3806
                     /locus_tag="VK150_05855"
     CDS             3572..>3806
                     /locus_tag="VK150_05855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30866.1"
                     /translation="MAARSSERNADFTLNIVQPKGPGFTRSTDFGSDSRVGLQVDLQM
                     SQRFSAVVQGISERRYDDSFDPILSMAHLKFQAL"
BASE COUNT          579 a         1230 c         1307 g          690 t
ORIGIN      
        1 ggctgggtgc tggccttctc cggcgtcggc ctggccctga acctcctggc caccttcgtg
       61 cttgtgcccc gggaccgcag cctcctcgaa cgggatgcga acctgcgcgc ggcctacctg
      121 cacgccttcg ccgacagcct caccagcgtc tccctggtgg cgagcatggt gctcatccgg
      181 ttcacaggct ggcgctgggt ggacccggcc atcgccctgg tcatcctggt ggtgatcctg
      241 cggggcgcga tgctgcttct gcgcgacgcg gtgggcatcc tcatgcaccg ggccgccttc
      301 gagcacgagg cggtgaaggc cgagctcctg gccctgccgg gtgtcctggg ggtggaggac
      361 ttccgcagct ggaagatgtg cagccacctc accatcgcca ccgcccacat catcgtggcg
      421 gccgaccggc tggccgacac cgaggatcac ctggccgaca tcgagcgcct gctctgggag
      481 cggcatgggg tgcggcacct taccgtgcac ttcgagacgc ccgacatggc cggccgtcac
      541 caccatcggt tcctgcacca ccatgaggct gagacccacg accacaatca cgagcaggat
      601 cacgccggac atgactaggg cggccagcgc cgccccagtc acatgccgtg gatcacggaa
      661 tcagttgccc atgccgtgct tcttcatgat gacggcgcgc tgggcgtcgt actcggcctg
      721 gttgatgagc tgcccgtcga agagctcctt gaggtcggtg agctcctcct tgagtgattt
      781 ggctggcgct gcggcggccg gagcatttcc ggcgggaaag ccctgctggc ccatggtctg
      841 ggccgcgccg gccatctgct ggcccatcat gttgcccatg ccgaagccga ggcccacgcc
      901 catgcccatg ccagcgacgc cgccggggtt ctgagcggcc aggggaatgc tgtctgccac
      961 ctgcatctgc gtgtaggcgc ccatgacggg ggccatcatg cccacgccgg tgcgcttgtc
     1021 catcatggct tccacttcct cgggcaggct gatgttctcc acgaagaatt tggagagctc
     1081 cagacccatg gtcttgaact cctcctgcag cttctgcttc acgaactccg agatctcgtc
     1141 gtacttcgcc gccaggtcca gggcgggaat cttggcctcg ccgagtgcat cggtgaagcg
     1201 gctcatgatg gtcttgcgga gctgttcgga gatgtcgggc acggtgtaga cgccgttggt
     1261 gcccaccagc tggcggagga acgtggcgct gtccaccacc ttgatggagt agatgccgaa
     1321 ggcccggatg cgcagcatgc cgaaatccgc gtcgcgcatc atgatcgggt tcgaggtgcc
     1381 ccacttcagg tcgttgtaga gcttggtgga gatgaagtag acatcgctct tgaaggggct
     1441 ctcgaagccg tacttccagc ccttgagggt ggcgaggatg ggcaggttct gggtggtcag
     1501 ccggtgggtg ccgggcttga atacgtcggc catctggcct tcgttgacga agaccgcttc
     1561 ctggctttcg cggaccacga gctggccgcc gttctggatt tcctggcccc gcatggggaa
     1621 gcgccacgcc agcgtgtcgg tggaatcatc cagccattcg aggatgtcga ggaattgggc
     1681 tttgccccag tccatcagac ccatgggttg ttctcctagt ggcatcggcc acaggtacga
     1741 ttctaggccc attggcaagc cggacgcggc tgttgctggg aaaaaccggt gaacggtcgg
     1801 cgcggatcgg gcagccgacg tcagcggctc ccctggatcc ggcgcacagg gccgtctgcc
     1861 ttgcccccgg gcgcttccag ccgggtcttg gtgtggacca tgcgggtgtc cgagtcgatg
     1921 acgcaacgcc agcccttctc cccgccgggc atccgcacgt ccacttccca gccgccagag
     1981 gcgccgttga ggctgatgcg ccgggcgtgg atggccctgc caccggtttc ccgttcggcg
     2041 atggccttgg cctctccggc ggagcgcacg ggcccggccg cgtgcttgcg ggcggcgggc
     2101 ttgcccgcgt ggagcacggc tgccggaagc agcagggcca ggagggcggt gcggacgcgc
     2161 atgggaactc cggaaggtcg ccgcagattg gcctgggctg acggccggat ggagccggct
     2221 tggtgtgggc cgtgaatcag ctgcggtaga gcgccgcgcc ccagtgcagg cccgagccca
     2281 gcgccgtgaa ggccaccgtc atgccgggct tgacgaggcc ttgggctcgg cactcgtgga
     2341 agaggatcgg cagggtggcg gcggtggtat tgccgtagcg ctcgatgttg tggggcacct
     2401 tcccggcggg gaggccgagg gctttctgga ccccctcgat gatgcggagg ttggcctggt
     2461 ggatgagcag caggtccagg tccgccacct ccaggttggc catggcgcag acctcgcgca
     2521 ccgcctgggg catgagggtc accgcggcct tgaagacctc cttgccggac atcaccggga
     2581 tggtctcccc ggcctggatc tgcgcgtggg tgacgaaagg ccggcgcttg aagctgactc
     2641 cggtcatggt gagcacgctg gcgccgctgc cgtcggtgtg cagttggatg ggtcccaggc
     2701 cctgtgtccc ttcccgggcc tcgatcacca ccgccccggc gccatcgccg aagagcacgg
     2761 tgcgatcgcg gctgagggtg ttctcggcgc gctcggcctc ggtgatctcc cgggtggact
     2821 ggccgacgag ggtgtcccag gccaggtgcc agggcatgaa cggggtatgg gcttccgcgc
     2881 ccaccagcag cacccgtcgg taccgcccgc tctggaggag caggtcggcc agttccaggc
     2941 catacaggaa cccgctgcac tgctggcgga tgtcgaaggt ggggatgtcc cgcaggccca
     3001 gggccacctg gagcaggggg ccgttgcccg gcagcaggtg atcgggcgtc atggtggcga
     3061 agatgaccgc atcgatgtcg gcgggcgtga gcccggcatc ggcgagggcg ccccgggagg
     3121 cgatggcccc caggtcggtg gagccctggc ccggttcggc gtagcgccgc tcctggatgc
     3181 cgctccgcac ccggatccac tcgtccgagg tgtccatcag gcgggcgagg tcctggttcg
     3241 tgaccacatg gcgcggcagg ccgatcccgg ttccggtgat gacactgcgc atggcgcctc
     3301 cttggacggg gaacggagcc aaggatagcg gcatggcgca ccggggattt ccccaacttc
     3361 aagcgcatgt tttttcatat taagtaaaaa attcccggtg tcgatgaaca tggttcaaat
     3421 gacccaaaag gtctcatgac acccattttc ggggggaggc gtaatgtcga aaaaatcctt
     3481 ggcactttgg gcgatagccc tgaacctggc tcccttcgga gccctagccc aagcagatcc
     3541 tgggatcagg ttcagcggct tcggcagctt ggtggccgcg cgctccagtg aacggaacgc
     3601 cgacttcacg ctgaacatcg tccagcccaa gggcccgggg ttcacgcgca gcacggactt
     3661 cggttcagac tcccgcgtcg gcctccaggt ggacctccag atgagccagc ggttctccgc
     3721 ggtggtgcag gggatttcgg agcggcgcta cgacgactcc ttcgatccca tcctcagcat
     3781 ggcccatctc aagttccagg ccctcc
//
LOCUS       DATGWW010000405         2125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_304359, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000405 DATGWW010000000
VERSION     DATGWW010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304359"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..1035)
                     /gene="bamD"
                     /locus_tag="VK150_05860"
     CDS             complement(106..1035)
                     /gene="bamD"
                     /locus_tag="VK150_05860"
                     /inference="COORDINATES: protein motif:HMM:TIGR03302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HLP30867.1"
                     /translation="MKRILTALTLLAALAGLGLGCRKPKAVDKGVQASELLATADKQM
                     KQGKFNEARLTLRHLEQYLPGSPEFPKAKLMLGDSFFFQASPSYPEAEVEYASFLNYF
                     PRHELRDYALYHRALCHFSSIESAERDQAETRKALQGFQQLIAESPGSPYAGETRAKI
                     LQCWRRIAEHELIVGVFYVNTYFYPGAERRLKALLETYPDYVDRERAYFYLGEAMRQR
                     LLADEELSQFNKDYAVKLQKPDLKDLTREQVAQYSKDFEAYSKEKVLGFRAEAKSYYQ
                     KLVESYPGSEWARRAADRLVTMGTSGVKEELDS"
     gene            complement(1032..2012)
                     /locus_tag="VK150_05865"
     CDS             complement(1032..2012)
                     /locus_tag="VK150_05865"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipase"
                     /protein_id="HLP30868.1"
                     /translation="MSGFIPVIPADLEPTVRGVLTGHGGLPLAWARWEHPQPKGRVVI
                     SHGYGEHGERYRHTAHWLHDLGWSVSSMDHRGFGRSGGIRGDAVGIRAFVDDFALFLR
                     QERRHDADRTGAKARVVDGVPMPPLPVCPQVVLGHSFGGLVALLTLLWHADTLDGLIL
                     SSPAVAVRSNSRLLVLLSRILRWFMPHRPVLLHGNKSQVCSDPVIVQRYEADPLCHRY
                     ATAAFGVALEEGRAEVLSLGQELDRPILLLDAGTDTVVDPEGSEELWSAVRPAMLERH
                     RLPGFYHEVFHDRRRAEAQALVEPWLENLARTWNPSHRTAMTEVLSPESA"
BASE COUNT          345 a          677 c          769 g          334 t
ORIGIN      
        1 gggacggggt caccccgacc cggccgcggg ggcccggggg tgtgcgcgca gcgcggccca
       61 tagatccagg caatgcatgc attgcctggg aacccccgga caaccctaac tgtcgagctc
      121 ttccttcacg ccgctggtgc ccatggtgac caggcggtcg gcggcgcggc gggcccactc
      181 ggacccggga tagctttcaa cgagcttctg gtagtagctc ttcgcctcgg cccggaagcc
      241 caggaccttc tctttgctgt aggcctcgaa gtccttgctg tactgcgcga cctgctcccg
      301 ggtgaggtcc ttgaggtcgg gcttctgcag cttgaccgcg tagtccttgt tgaactggga
      361 cagttcctcg tcggccagga ggcgctgccg catggcctcg cccaggtaga agtaggcccg
      421 ctcccgatcc acgtagtcgg ggtaggtttc cagcagggcc ttcagccggc gctcggcgcc
      481 ggggtagaag taggtgttca cgtagaacac gcccacgatc agctcgtgct cggcgatgcg
      541 ccgccagcac tggaggatct tggcccgggt ctcgccggcg taggggctgc cgggcgattc
      601 ggcgatgagc tgctggaagc cctggagggc tttccgggtc tccgcctgat cacgctcggc
      661 gctctcgatg gaagaaaagt ggcagagggc ccggtggtac agggcgtaat cccgcagttc
      721 gtggcgtggg aaatagttca ggaagctggc gtactcgacc tcggcctcgg ggtagctggg
      781 gctcgcctgg aagaagaaac tgtcgcccag catcagcttg gctttgggga actccgggga
      841 gccgggcagg tactgctcca ggtgtcgcag ggtgaggcgg gcttcgttga acttgccctg
      901 cttcatctgc ttgtccgccg tggccagcag ttcagaggcc tgcaccccct tgtccacggc
      961 cttgggtttg cggcagccca gccccagtcc cgccagggcg gcgagcaggg tgagggcggt
     1021 gaggatgcgc ttcatgcaga ctccggagac aacacttcag tcatggcggt acggtgggaa
     1081 gggttccagg ttcgagccag gttctcgagc cagggctcga ccagggcctg ggcctcggcg
     1141 cggcggcggt cgtggaagac ctcatggtag aagcccggca gccggtgccg ttccagcatg
     1201 gcagggcgca cggcggacca gagttcctcg gagccctccg gatccaccac ggtgtccgtg
     1261 ccggcgtcca gcagcaggat ggggcggtcg agctcctggc ccagggagag cacctcggcc
     1321 cgcccctcct ccagggccac cccgaaggcg gccgtggcgt agcgatggca caggggatcg
     1381 gcctcgtagc gctggacgat gacggggtcc gagcagacct ggctcttgtt gccatgcagc
     1441 aggacgggcc ggtgcggcat gaaccaccgc aggatgcggg agaggaggac cagcaatctc
     1501 gaattcgacc gcacggccac cgcggggctg gagaggatga gcccgtccag ggtgtcggca
     1561 tgccacagca gggtgaggag ggccaccagc ccgccaaagc tgtggcccag caccacctgg
     1621 gggcagacgg gcaggggcgg catggggacg ccgtccacca cgcgggcctt ggctccggtg
     1681 cggtcggcgt cgtgccgccg ctcctggcgc aggaagaggg cgaagtcgtc cacgaaggcc
     1741 cggatgccca ccgcatcccc ccggatgccg ccggaccggc caaagccccg gtgatccatg
     1801 ctggacacgg accagcccag gtcgtgcagc cagtgggcgg tgtgccggta gcgctcgccg
     1861 tgctctccgt agccgtggga gatcaccacc cggcccttgg gctggggatg ctcccagcgg
     1921 gcccaggcca ggggcaggcc gccatggccg gtcaggaccc cacggacggt gggctccaaa
     1981 tcggcgggga tcacggggat gaaaccagac atccatccag aatagcgtgg ggacgggatg
     2041 tcccttaaac tcaaaggttc cccggactcc ggggcgggag aggccaagca tggatttcga
     2101 gaccctggta cgggccaagc acgac
//
LOCUS       DATGWW010000406         2107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_439263, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000406 DATGWW010000000
VERSION     DATGWW010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_439263"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1517)
                     /locus_tag="VK150_05870"
     CDS             complement(<1..1517)
                     /locus_tag="VK150_05870"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF015448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HLP30869.1"
                     /translation="MLLERQALAQEIPAAAGLETRELCELFAALGFPVDGVARREGTE
                     VLDVDITANRGDAMSHRGLAREVAAKLRQPLTPIPAPPTPEGPAVVEVRLDSPACPIY
                     STAVLELGSGATPQQVQAFLLALEATPKRLPAVDASNELLHRYGHPTHAFDADRIQGA
                     VSIRWAKAGETLVTLDGVTRTLTPQDLVIADAGGAIALAGVMGGDGTKVTESTRRVLL
                     ESAWFDPKTVRATARRHSLHTDASHRFGRGADPAMAMVARDLLVGRLQAWCGAKLLGA
                     WTVGGLPPVGAPVTLTESLLSRIAGEPMPLPDAAEALRRLGCEVAVEGDRLVAQAPRW
                     RHDLAIPEDLAEEVLRLKGYEGIPSVLPPLEGPPEPLSAAYLQRQRLSRRLAHLGFHQ
                     TVTYGFISPEMDAAFVDPANPAEGRTLANPLGQEYSVMRGSLLPSLRAAAEQNLRQGG
                     REVRLFELAPTHASGPQGPVERFMLGVVWGGTLGGEDYLSPARGVREADLSGIARA"
     gene            complement(1517..>2107)
                     /locus_tag="VK150_05875"
     CDS             complement(1517..>2107)
                     /locus_tag="VK150_05875"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF013568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HLP30870.1"
                     /translation="SDTFYLAAHPELLLRTHTSPVQVRTLLRVAPELATRGGIRFLAP
                     GRVYRKDEIDPTHSPMFHQVEGMLVGRGIGMQHLKGTLEYALRALFGPHTEIRLRPSY
                     FPFVEPGCEVDVSCPLCAAKGCRVCKGSGWVEILGAGLIHPNVLAYAGIDPAEWSGWA
                     FGMGVERMAMMLSQTPDLRLFFENDQRFLKVMGGLD"
BASE COUNT          310 a          713 c          794 g          290 t
ORIGIN      
        1 gcccgggcga tgccgctgag gtcggcttcg cgaacaccgc gggccgggct cagatagtcc
       61 tcccctccca gggtgccgcc ccataccacg ccgagcatga accgctcgac cggaccctgc
      121 gggccgctgg cgtgggtggg cgccaactca aacaggcgca cctcccggcc accctgcctg
      181 aggttctgct ccgcggcggc gcgaaggctc ggcaggaggg atccgcgcat gaccgaatac
      241 tcctggccca gtggattggc cagggtgcgg ccctcggccg gattggccgg atcgacgaag
      301 gcagcatcca tctcagggct gatgaagccg taggtgacgg tctggtggaa acccaggtgc
      361 gccaggcgtc gggagagcct ctgccgctgg aggtaggccg ccgacagcgg ctcgggtggg
      421 ccctccaggg gcggcagtac cgaggggatc ccctcatagc ccttcaggcg cagcacttct
      481 tccgcgagat cctcgggaat ggcgaggtcg tggcgccacc ggggcgcctg cgccacaagt
      541 cgatcgcctt cgaccgccac ctcgcagccc aggcgccgca gggcctcggc cgcgtcgggc
      601 aggggcatcg gttcgccggc gatgcgggag agcagggatt ccgtcagggt cacgggtgcg
      661 ccgaccgggg gcaggccgcc cacggtccag gcgcccagga gcttggcgcc acaccaggcc
      721 tggaggcggc ccaccagcag gtcgcgggcg accatggcca tggccgggtc cgcgccgcgg
      781 ccgaagcggt gcgaggcgtc cgtatgcagg ctgtggcgcc gcgcggtggc gcgcaccgtc
      841 ttcggatcga accaggcgct ttccagcaac acgcgacggg tggattcggt caccttggtg
      901 ccgtcgcccc ccatgacgcc cgccagggcg atggcgccgc ccgcatcggc gatgaccagg
      961 tcctgcggcg tgagggtgcg ggtgacgcca tccaacgtca ccagcgtctc cccggccttg
     1021 gcccagcgga tggacaccgc gccctggatg cggtccgcgt cgaaggcgtg ggtggggtgg
     1081 ccgtagcggt gcagcagttc gttggaggcg tccaccgctg gcaaccgctt gggcgtggcc
     1141 tccagggcca gcaggaaggc ctgcacttgc tggggcgtgg cgccgctgcc cagctcgagg
     1201 accgccgtgc tgtagatggg gcaggccggg ctgtcgaggc gcacctcgac cacggccggt
     1261 ccttccggcg tgggcggggc cggaatcggc gtcaggggct ggcgcagctt ggccgccacc
     1321 tcgcgcgcca ggccgcggtg ggacatggcg tcgccgcggt tggcggtgat gtccacatcc
     1381 agcacctccg tgccttcccg ccgggcgacg ccatcgacgg gaaaaccgag ggcggcgaag
     1441 agctcgcaga gctcgcgcgt ctcgaggccc gcggcggcgg ggatctcctg ggcgagggct
     1501 tgacgttcga ggagcatcag tcgagccctc ccatgacctt taggaagcgt tggtcgttct
     1561 cgaagaagag gcgcaggtcg ggcgtctggc tcagcatcat ggccatgcgc tcgacgccca
     1621 tgccgaaggc ccagcccgac cactcggcgg gatcgatgcc ggcgtaggcc agcacgttgg
     1681 gatggatgag gccggcgccg aggatctcga cccagccgga tcccttgcac acgcggcagc
     1741 ccttggcagc acagaggggg cagctcacgt ccacctcgca gcccggctcc acgaagggga
     1801 agtacgaggg gcggagacgg atctccgtgt ggggcccgaa gagcgcccgc agggcgtact
     1861 caagggtgcc cttcaggtgc tgcatgccga tgccgcggcc cacgagcatg ccctccacct
     1921 ggtggaacat ggggctgtgg gtgggatcga tctcatcctt gcggtacacg cggcccggcg
     1981 ccaggaagcg gatgccgccg cgcgtcgcga gctcgggcgc cacgcgcagg agcgtgcgca
     2041 cctgcacggg gctggtgtgg gtgcggagca gcagttcggg atgcgccgcc agatagaacg
     2101 tgtcgga
//
LOCUS       DATGWW010000407         1633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_304433, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000407 DATGWW010000000
VERSION     DATGWW010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304433"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..593
                     /locus_tag="VK150_05880"
     CDS             <1..593
                     /locus_tag="VK150_05880"
                     /inference="COORDINATES: protein motif:HMM:NF024937.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4126 domain-containing protein"
                     /protein_id="HLP30871.1"
                     /translation="HGSKMGVRLLAHTSPEPASHSLLSVAEDAGVAALLVLIYRHPAV
                     ALPVIGAILVATALLVPLLLRTLAFILAGLRGALRAVVGRGHRDEIPVWVELKALELA
                     PEGTSPILPCVARQVKGVPRLASAYLVRAEGQWHLVHRRWFRTRSQAFDAAPGPARVF
                     PGFLWDTTVFLLARKPQVVLVGRDWRHALPAAVPPA"
     gene            694..>1633
                     /locus_tag="VK150_05885"
     CDS             694..>1633
                     /locus_tag="VK150_05885"
                     /inference="COORDINATES: protein motif:HMM:NF017464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase N-terminal
                     domain-containing protein"
                     /protein_id="HLP30872.1"
                     /translation="MRRSLPSLALCLVVPALVAAPPKARPKPGPKAAPAQTSQGLDLA
                     GMEPTVAPGDDFYRYANGGWLARTEIPADRGSFGVGHQVADLTDQRTAALIQAAAASD
                     APEGSDLRKIGDCYTSFMDEKAIEARGLKPLQPTFQAIARIQTRRDLAQYLGTTLRAD
                     VDVLNATRMDTTNLFGLWVAQDLDDPTRYAPFLLQGGLGLPERSYYLDPAEGMAKVRV
                     QYEAHVAAMLKLAGLDDVQARAAAIVALETRMAKAHASREESGDVLKGNNHWTRADFA
                     RKAPGLDWESYFAAAGLKQADVFVVWQPGAFTGLSAL"
BASE COUNT          218 a          640 c          541 g          234 t
ORIGIN      
        1 cccacggcag caagatgggc gtgcgcctcc tggcccacac ctcaccggaa cccgccagcc
       61 acagcctcct cagcgtggcg gaggacgcgg gcgtggcggc gctgctggtc ctgatctaca
      121 ggcatccggc cgtggccctt cccgtgatcg gggcgatcct cgtggccacg gccctcctcg
      181 tgcctctcct gctgcggacc ctggccttca tcctggcggg tctgcgcggg gccctgcgcg
      241 cggtggtcgg ccgcggccac cgggacgaga tccctgtctg ggtggagctg aaggccctgg
      301 aactggcgcc cgaggggacc tcgccgatcc tgccctgcgt cgcgcgccag gtgaagggtg
      361 tgccccgcct cgcgtcggcc tacctggtcc gggcggaagg acagtggcac ctcgtccacc
      421 gccgctggtt ccggacccgg agccaggcct tcgacgccgc gccgggccct gcgcgcgtct
      481 tccccgggtt cctctgggac accacggtgt tcctgctggc ccggaagccc caggtcgtgc
      541 tggtcgggcg cgactggcgc cacgcgcttc cggccgcagt gcccccggcc taacctccgc
      601 gcggcccccc cggggtaaag gggtgagtat catgtccatc gcgccctgaa gggcgccttc
      661 tgttccacct gcaagccctc ggggatcttt cctatgcgtc gatcgttgcc ctccctcgcc
      721 ctctgcctgg tcgtccccgc gctggtggcg gctcccccca aggcccgtcc caagcccgga
      781 cccaaggcag cccccgcgca gacctcccag ggcctggacc tcgcgggcat ggaacccacg
      841 gtggcgccgg gcgatgactt ctaccgctat gccaacggag gctggctggc ccggacggag
      901 atccccgcgg accgcggatc tttcggcgtg ggccaccagg tggccgacct caccgaccag
      961 cgcacggccg cgctcatcca ggccgcggcg gcgtccgacg cccccgaggg ctccgacctg
     1021 cgcaagatcg gcgactgcta caccagcttc atggacgaga aggccatcga ggccaggggc
     1081 ctgaaacccc tccagcccac cttccaggcc attgcccgca tccagacccg ccgcgacctg
     1141 gcccagtacc tcggcaccac cctgcgggcc gacgtggacg tgctgaacgc cacccgcatg
     1201 gacaccacca acctcttcgg gctctgggtg gcgcaggatc tggacgaccc cacccgctac
     1261 gcgcccttcc tgctgcaggg cggcctgggc ctgccggaac ggagctacta cctggatccc
     1321 gccgagggca tggccaaggt gcgcgtccag tacgaggccc acgtggccgc catgctgaag
     1381 ctggccgggc tggacgacgt gcaggcccgc gccgccgcca tcgtggcgct ggagacgcgc
     1441 atggccaagg cccacgccag ccgcgaggaa tccggcgacg tgctgaaggg caacaaccac
     1501 tggacccgcg ccgacttcgc ccgcaaggcc ccgggcctgg actgggagtc ctacttcgcg
     1561 gccgccgggc tcaagcaggc cgacgtcttc gtggtctggc agccgggcgc cttcacgggc
     1621 ctgtcggccc tca
//
LOCUS       DATGWW010000408         2306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_30278, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000408 DATGWW010000000
VERSION     DATGWW010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30278"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..213)
                     /locus_tag="VK150_05890"
     CDS             complement(<1..213)
                     /locus_tag="VK150_05890"
                     /inference="COORDINATES: protein motif:HMM:NF014672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE family protein"
                     /protein_id="HLP30873.1"
                     /translation="MGKLLFILNDPPYGTERSYNGLRLAGAAAKREGEAVRVFLMGDA
                     AACAKRGQATPNGYYNLERMLKAVTGK"
     gene            complement(268..1125)
                     /locus_tag="VK150_05895"
     CDS             complement(268..1125)
                     /locus_tag="VK150_05895"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HLP30874.1"
                     /translation="MGAFDGKGMVIQGLRFLAPKEACEALEGGALLVDLRADELVAMK
                     AFRVPETIHIPHRELPGLLPDLPRDRALVLADTSGVFTKDAARLLLAEGFHDVACLNG
                     GLLAWDQEGLPLLTDPEAILHGECACVMTSRKKRRPMPRSILFLCVANSARSQLAEGL
                     ARRLFPGLTIQSAGSRPTGVNPYALEALAELGIDASAHTSKSVQDIDPASVDLVVTLC
                     AEEVCPAFLGRAERLHWPIADPASADPSLTPEELRQRFRAARDEIRRRLEGLALGGPA
                     GGPAGNVRF"
     gene            complement(1129..>2306)
                     /gene="arsB"
                     /locus_tag="VK150_05900"
     CDS             complement(1129..>2306)
                     /gene="arsB"
                     /locus_tag="VK150_05900"
                     /inference="COORDINATES: protein motif:HMM:TIGR00832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008490 - arsenite secondary active
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ACR3 family arsenite efflux transporter"
                     /protein_id="HLP30875.1"
                     /translation="PRSPLPLKGPVMAPTSPTATAPGSPKAAGQGRLGFLDRYLTLWI
                     FLAMGLGVLLGFAVPGFNRAINAWNVGTTSVPLAAGLILMMYPPLAKVKYEELHLVFR
                     NKKVLGLSLLQNWVIGPVLMFGLAVLFLRDRPEYMLGLILIGLARCIAMVIVWNDLAK
                     GDTEYCAGLVAFNSIFQVLFFSVYAWFFATVLPAKLGLQGAVVAITIGQIAESVFIYL
                     GIPFIAGFLTRFVLGRIKGLDWYHRVFVPKISPLTLLALLFTIVVMFSLKGDTIVKLP
                     LDVLRIALPLLVYFVVMFLVSFWLSRKAGATYPQGATLSFTAASNNFELAIAVAVATF
                     GIAHGAAFAAVIGPLVEVPVLISLVSVAFWLKARWYPDSAETVTEVTCCPTAEPGKR"
BASE COUNT          395 a          759 c          823 g          329 t
ORIGIN      
        1 cttcccggtc acggccttca gcatgcgctc caggttgtag tagccgttag gtgtggcctg
       61 gccccgcttc gcgcaggcag ccgcatcccc catcaggaag acccggaccg cctccccttc
      121 ccgcttggcc gcggcgccgg ccaggcgcag gccattgtag ctgcgttccg tgccataggg
      181 cggatcgttg aggatgaaca ggagcttgcc catgggaacc tcgcagggga tgggatctgg
      241 tcttcgtgcg gcagctcggc cgaggcctca gaatctcacg ttcccggccg gcccgccggc
      301 ggggcctccg agcgccagcc cctccagccg gcgccggatc tcgtcccggg cggcgcggaa
      361 ccgctggcgc agctcctcgg gcgtcagcga cgggtccgcg ctggcgggat cggcaatggg
      421 ccagtgcagg cgttcggccc tgcccaggaa ggccgggcac acctcctcgg cgcagagggt
      481 gacgaccagg tccaccgaag cgggatcgat gtcctggacg gacttggagg tgtgggcact
      541 cgcgtcgatg cccagctccg ccagcgcctc cagcgcgtag gggttcaccc ccgtgggccg
      601 gctgccggcg ctctggatgg tgagccctgg aaacagccgc cgggccaggc cttccgccag
      661 ctgggaccgg gcactgttgg cgacgcagag gaacaggatg gaccggggca tggggcgcct
      721 tttcttgcgg gaggtcatga cgcaggcgca ctccccgtgg aggatggcct cgggatcggt
      781 gagcagcgga agtccttcct ggtcccaggc gagcaggccc ccgttcaggc aggccacgtc
      841 gtgaaaccct tcagccagga gcagccgcgc cgcatccttg gtgaacacgc cggaggtgtc
      901 ggccagcacc agggcccggt ccctgggcag gtccgggagg aggcccggca gctcgcggtg
      961 cgggatgtgg atggtctcgg gcacgcggaa ggccttcatc gccacgagct catcggcgcg
     1021 gaggtccacc aggagcgcgc caccctccag ggcctcgcag gcctccttcg gggcgaggaa
     1081 ccggagcccc tggatcacca tgcccttgcc gtcgaaggcg cccatggctc accgcttccc
     1141 gggttcggcc gtcgggcagc aggtgacctc tgtgacggtc tccgcgctgt ccgggtacca
     1201 gcgggccttg agccagaagg ccacgctgac gaggctgatg agcaccggca cctccaccag
     1261 gggcccgatg accgccgcga aggccgcccc gtgggcgatg ccgaaggtgg ccacggccac
     1321 ggcgatggcc agctcgaagt tgttgctggc ggcggtgaag ctgagggtgg cgccctgcgg
     1381 ataggtggcg ccggccttcc gcgacagcca gaagctcacc aggaacatca ccacgaagta
     1441 gaccagcagc ggcagtgcga tgcggagcac atccaggggc agcttcacga tggtgtcgcc
     1501 cttgaggctg aacatcacca cgatggtgaa gagcagcgcc agaagcgtca gcgggctgat
     1561 cttcggcacg aagacccggt ggtaccagtc gaggcccttg atccgtccga gcacgaaccg
     1621 ggtgaggaag ccggcgatga acggaatgcc gaggtagatg aagacgctct ccgcgatctg
     1681 gccgatcgtg atggccacca ccgcgccctg gagccccagc ttcgccggca gcaccgtggc
     1741 gaagaaccag gcgtacacgc tgaagaacag cacctggaag atcgaattga acgccaccag
     1801 gcccgcgcag tattccgtgt cccccttggc cagatcgttc cacacgatga ccatggcgat
     1861 gcaacgggcc aggccgatga ggatgaggcc cagcatgtac tcgggccggt cgcgcaggaa
     1921 gagcacggcc aggccgaaca tcagcacggg gccgatgacc cagttctgca gcagcgagag
     1981 gccgagcacc ttcttgttgc ggaacacgag gtggagctcc tcgtacttca cctttgccag
     2041 gggcggatac atcatcagga tcaggcccgc ggcgaggggc acgctggtgg tgcccacgtt
     2101 ccaggcgttg atggcccgat tgaagcccgg cacggcgaag cccaggagca caccgaggcc
     2161 catggccagg aagatccaga gggtgaggta ccggtcgagg aaccccaggc gcccctggcc
     2221 cgcggccttg ggagaaccgg gggccgtggc cgtgggtgaa gtgggtgcca tgacgggtcc
     2281 tttcaggggc agtggggatc gcggca
//
LOCUS       DATGWW010000409         2179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_77475, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000409 DATGWW010000000
VERSION     DATGWW010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77475"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..1401)
                     /gene="secY"
                     /locus_tag="VK150_05905"
     CDS             complement(46..1401)
                     /gene="secY"
                     /locus_tag="VK150_05905"
                     /inference="COORDINATES: protein motif:HMM:TIGR00967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HLP30876.1"
                     /translation="MNRLRNLFAIPELRKRLIFTLVLLAIYRLGVHVSVPGVNAENLQ
                     AALRRGGGGLFDVVDLFSGGAFKKFSVFALGIAPYITASIVLQLMGAVVPYLENLQKK
                     EGEAGRQKINQWTRYLTVLLAFVQGMGIASLAQSQNAPGLEVVTSSLSPTAFRLLAAF
                     TLSVGTIFVMWIGEQITERGIGNGISLLIFAGIVAGLPQAMTTLTVMITQSLKNAPNV
                     PPPGIFILLISAMIVVLLAVVLVENAYRRIPIHYARRADSAGMSSQRSSYMPLKLNTA
                     GVMPVIFASSVIFFPATIAQFTRWEWLAKAASYLSPQTHFWIYTPVFVGVVIFFAFFY
                     TSIVFNPDETAENMKRSGGYIPGIRPGKETSVFMDGILSKLTFVGAIYLALVSLVPLL
                     ITNNIQGLNFYFGGTSLLIVVGVAMDSAAQLESLLVMRRYDGFLEKGRIRGRSTRGGV
                     A"
     gene            complement(1408..1869)
                     /gene="rplO"
                     /locus_tag="VK150_05910"
     CDS             complement(1408..1869)
                     /gene="rplO"
                     /locus_tag="VK150_05910"
                     /inference="COORDINATES: protein motif:HMM:TIGR01071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HLP30877.1"
                     /translation="MKLNELRPAEGATKTRKRLGRGKGSGLGKTSGRGEKGQKSRSGY
                     RGKRGFEGGQMPLVRRLPKRGFTNIFAPETKEITLSLISIHFKDGETVTLDALRDKKL
                     VNSRVAKIVVLASGELTAKVNVVADRITKGAREAILAKGGTIQEPVAKSAE"
     gene            complement(1873..2070)
                     /gene="rpmD"
                     /locus_tag="VK150_05915"
     CDS             complement(1873..2070)
                     /gene="rpmD"
                     /locus_tag="VK150_05915"
                     /inference="COORDINATES: protein motif:HMM:TIGR01308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HLP30878.1"
                     /translation="MSQYIGKQVVLTLKRSIICTTPKHRAFMQTLGLKRPGDTRECEY
                     TPNVHGMVKLVPHLIGVQVKG"
BASE COUNT          390 a          637 c          774 g          378 t
ORIGIN      
        1 ccttcccgga gcccggggcc ccgaggagga tgttcgcggt caacgtcatg ccacgccccc
       61 ccgggtcgaa cgaccgcgga tgcggccctt ctccaggaag ccgtcataac ggcgcatgac
      121 caacaggctt tccagctggg ccgcgctgtc catggccacg cccaccacga tcagcaggct
      181 ggtgccgccg aagtagaagt tgaggccctg gatgttgttg gtgatgagca ggggtaccag
      241 ggagaccagg gcgaggtaga tggcgcccac gaaggtcagc ttggacagga taccgtccat
      301 gaagacgctg gtttccttgc ccggacggat gcccgggatg tagcccccgg accgcttcat
      361 gttctcggcg gtctcatcgg gattgaagac gatgctggtg tagaagaagg cgaagaagat
      421 caccacgccc acaaagaccg gcgtgtagat ccagaagtgg gtctgcgggc tgaggtagga
      481 cgccgccttg gcgagccatt cccagcgggt gaactgggcg atggtggccg ggaagaagat
      541 caccgagctg gcgaagatga cgggcatcac gccggcggtg ttcagcttca ggggcatgta
      601 cgagctgcgc tggctggaca tgccggcgga atcggcgcgg cgggcgtagt ggatggggat
      661 gcgccggtag gcgttctcca ccaggaccac ggccagcagc acgacgatca tcgccgagat
      721 gagcaggatg aagatgccag gaggcggcac gttcggggcg ttcttcaggg actgggtgat
      781 catgaccgtc aaggtggtca tggcctgggg caggcccgcc acgatgcccg cgaagatcag
      841 cagcgagatg ccattgccga tgccgcgctc cgtgatctgt tcgccgatcc acatgacgaa
      901 gatggtgccc acggacagcg tgaaggccgc cagcagccgg aaggccgtcg gggacagcga
      961 ggaggtgacc acctcaaggc ccggggcatt ctggctctgg gccagggacg cgatgcccat
     1021 gccctggacg aaggccagga gcacggtcag gtagcgggtc cactggttga tcttctggcg
     1081 gccggcttcg ccttccttct tctggaggtt ctccaggtag ggcaccaccg cccccatcag
     1141 ctgcagcacg atgctggccg tgatgtaggg ggcgatgccg agggcgaaga cggagaactt
     1201 cttgaacgca ccaccggaga acaggtcgac gacgtcgaag agaccgccgc cgccgcgccg
     1261 gagcgcggct tgaaggttct cggcgttcac cccgggcacg ctgacgtgca ctcccaggcg
     1321 gtagatcgcc aggaggacga gggtgaagat gagccgcttg cgcagctccg ggatggcgaa
     1381 gaggttcctg aggcgattca tcggccgtta ctcggcagac ttcgcgacgg gctcctgaat
     1441 ggtgccgccc ttggccagga tggcttcccg ggcgcccttg gtgatgcgat cggcgacgac
     1501 gttcaccttg gcggtgagct cgccgctggc cagcaccacg atcttcgcca cgcgggaatt
     1561 gacaagcttc ttgtcccgca gggcatcgag ggtgaccgtc tcgccatcct tgaagtggat
     1621 ggagatgagg ctgagggtga tttccttcgt ctcgggggcg aagatgttgg tgaagccgcg
     1681 cttgggaagg cgacgcacca ggggcatctg gccgccctcg aaaccgcgct tgccgcggta
     1741 gccggagcgg gacttctggc ccttctcgcc gcgaccggag gtcttgccta ggccggagcc
     1801 cttgccgcgg ccgagccgct tgcgggtctt ggtggcgccc tcagcggggc ggagttcgtt
     1861 gagcttcatg gtctacccct tcacctgaac gccgatgaga tggggcacga gcttgaccat
     1921 cccatggaca ttgggggtgt attcgcattc gcgggtatcg ccgggccgct tgagaccgag
     1981 ggtctgcatg aaggcgcggt gcttgggagt ggtgcagatg atggagcgct tgagcgtcag
     2041 caccacctgc ttgccgatgt actgcgacat gttaaacctc cgcctgatcc aggccccggt
     2101 tggtcaggac cgtgtaggga tccatgaggt ccttcagacc ctcgaacgtg gcgcgaacca
     2161 cgttgtgggg gttggagga
//
LOCUS       DATGWW010000410         2668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_30549, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000410 DATGWW010000000
VERSION     DATGWW010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2668
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30549"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..932)
                     /gene="fliF"
                     /locus_tag="VK150_05920"
     CDS             complement(<1..932)
                     /gene="fliF"
                     /locus_tag="VK150_05920"
                     /inference="COORDINATES: protein motif:HMM:TIGR00206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009431 - bacterial-type flagellum basal
                     body, MS ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body MS-ring/collar protein
                     FliF"
                     /protein_id="HLP30879.1"
                     /translation="MAGESNLAEQLTSAFKGMSATQRVMVAAISLTVLLALGGLGIWA
                     GQESKSVLAANVSPQEASAIVAQLDKAQVPYELSSDQRTILVPESKVGQLRLKFAGDG
                     LLSGDKLGFEKLENAGLGTTDFSQKVIHRRAMEAQLAKTIMSLQQVSEATVHITPSND
                     SPFLTDKEDAKASVLLKLRGSRMLPDENTQAIVNLVAASVEGLKPDQVVIIDQYSRIL
                     SRTGRDPMVGASDAQKKVAREEEDHLVRRVTEMLEPVVGIGKVRATAHVDLDFDKVKI
                     NEEKFDPQGQVERSIQQKDEKVQKREAGAGVPGTP"
     gene            complement(982..1302)
                     /gene="fliE"
                     /locus_tag="VK150_05925"
     CDS             complement(982..1302)
                     /gene="fliE"
                     /locus_tag="VK150_05925"
                     /inference="COORDINATES: protein motif:HMM:NF014143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HLP30880.1"
                     /translation="MDPLQNIPSLSPLSPVSGTSKSGLGSGVPAAEGEPGFGDLLKQA
                     LQEVNQASAQAEDEARNLMTGESADMHTAMLAVQKADLSFQMMMAVRSKLIDAYREVM
                     RMQM"
     gene            complement(1377..1796)
                     /gene="flgC"
                     /locus_tag="VK150_05930"
     CDS             complement(1377..1796)
                     /gene="flgC"
                     /locus_tag="VK150_05930"
                     /inference="COORDINATES: protein motif:HMM:TIGR01395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HLP30881.1"
                     /translation="MSIPQILDIASTGMAAQRLRVQLIASNIANSETTRTKEGGPYRR
                     KDAVFRAQDMGFSGALANAGVKVAEIRTSQEPFLTRYEPGHPDANADGVVSYPNVNPV
                     EEMVNLTEASRAYEANIAVVRAAKAMATSALEILRVQ"
     gene            complement(1799..2215)
                     /gene="flgB"
                     /locus_tag="VK150_05935"
     CDS             complement(1799..2215)
                     /gene="flgB"
                     /locus_tag="VK150_05935"
                     /inference="COORDINATES: protein motif:HMM:TIGR01396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009429 - bacterial-type flagellum basal
                     body, proximal rod [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HLP30882.1"
                     /translation="MFDLTSGNGMIQTMDRGLSLASQRQTLIASNLANLDTPGYRTRD
                     FSFEGAMKAAISGQKSPSTLATTHPMHLQGSASASLPPSLDPLQPLAERNDGNDVSLD
                     RENMLLARTQTTYQTASTFMQVELRKLYSLIREGSK"
     gene            2439..>2668
                     /locus_tag="VK150_05940"
     CDS             2439..>2668
                     /locus_tag="VK150_05940"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HLP30883.1"
                     /translation="MILNTRKHNDVLILYPEGKITLGDGDQELGEAVRTSLSNGARKI
                     VINFSKVSYLDSSGVGELVGCYTSIKNKGGDLR"
BASE COUNT          390 a          812 c          955 g          511 t
ORIGIN      
        1 ggggtgccgg ggacgccggc gcccgcttcc cgcttctgga ccttctcgtc cttctgctgg
       61 atgctgcgct ccacctggcc ctgggggtcg aacttctcct cgttgatctt caccttgtcg
      121 aagtcgaggt ccacgtgggc cgtggcgcgc accttcccga tgcccacgac gggctcgagc
      181 atttcggtga cgcggcggac caggtggtcc tcctcctccc gggcgacctt cttctgggca
      241 tcgctggcgc cgaccatggg atcgcggccg gtgcgggaga ggatgcggct gtactggtcg
      301 atgatcacga cctggtcggg cttcaggccc tccacgctgg cggccaccag gttcacgatg
      361 gcctgggtgt tctcgtcggg gagcatccgc gagccgcgca gcttgagcag cacgctggcc
      421 ttggcgtcct ccttgtccgt gaggaagggg ctgtcgttcg aaggcgtgat gtggaccgtg
      481 gcttccgaga cctgctggag gctcatgatg gttttcgcca gctgggcctc catggcccgg
      541 cggtggatca ccttctgaga gaagtcggtg gtgccgaggc cggcgttctc gagcttctcg
      601 aagcccagct tgtcgccgct gaggaggccg tccccggcga acttcaggcg cagctgcccg
      661 accttgcttt cgggcacgag gatggtccgc tggtcggagc tgagctcgta gggcacctgg
      721 gccttgtcca gctgggccac gatggcgctg gcctcctggg gcgagacatt ggccgccagg
      781 acgctcttgg attcctgccc cgcccagatg cccaggcccc cgagggccag gagcactgtc
      841 agggaaatgg cggccaccat gacgcgttgg gtcgcgctca tgcctttgaa ggcgctggtg
      901 agttgttctg cgaggttgct ttccccggcc atgggcgttc ctcagtcagg ggtgaggccg
      961 cgccggaaag cttggcctgc gctacatctg catgcgcatg acctcgcggt aggcatcgat
     1021 cagcttggat cggacggcca tcatcatctg gaagctaaga tcggccttct ggactgccag
     1081 catggccgtg tgcatgtctg cactctcccc tgtcatcaag ttccgtgcct catcctcggc
     1141 ctgggccgaa gcctggttca cttcctgcaa ggcctgcttg agaagatcgc cgaaacccgg
     1201 ctccccttcg gcggccggaa cgccgctgcc caggccggac ttggaggttc cggagacggg
     1261 gctgaggggg gagagcgagg ggatgttctg gagtggatcc atggggggct cggggggaaa
     1321 ggcctttcac acgatcggtc gggggccgcg cgggggcaag tcgaaaaacc gacagcctac
     1381 tggacgcgga ggatttcgag ggcggaggtg gccatggcct tggcggccct gaccacggcg
     1441 atgttcgcct cgtaggcgcg gctggcctcg gtgaggttca ccatctcctc cacgggattg
     1501 acgttggggt agctcacgac gccgtcggcg ttcgcgtccg gatgccccgg ctcgtagcgg
     1561 gtgaggaagg gctcctggct ggtgcggatc tcggcgacct tgacgccggc gttggcgagg
     1621 gccccggaga agcccatgtc ctgggcccgg aacaccgcgt ccttgcggcg gtaggggccg
     1681 ccttccttgg tgcgggtggt ctcgctgttg gcgatgttcg aggcgatgag ttgcacccgc
     1741 agccgctggg cggccatgcc ggtgctcgcg atgtcgagga tctgggggat gctcatggct
     1801 acttgctccc ttcgcggatg agcgagtaga gcttgcggag ctcgacctgc atgaaggtgg
     1861 aggcggtctg gtacgtggtc tgggtgcggg cgagcagcat gttctcccgg tccaggctca
     1921 cgtcgttgcc atcgttgcgc tcggccaggg gctggagggg gtccaggctg gggggcaggg
     1981 aggcgctggc gctgccctgg aggtgcatgg gatgggtggt ggccaaggtg ctgggcgatt
     2041 tttgccccga aatggccgcc ttcatggcgc cctcgaagct gaaatcccgg gttcggtagc
     2101 ccggggtatc gaggttggcc aggttcgagg cgatgagcgt ctggcgctgg gaagccaggg
     2161 acaggccgcg atccatggtc tggatcatcc cgttgccgct ggtgaggtcg aacatggcgc
     2221 accctgcaga atgggccggg tgaccccggc tccgggagga aggaatgcag accccgtgcc
     2281 gagatggggg atggcccttt cggaggcctc ccgatctccc cgatcccgcg aagtggtctc
     2341 cgtgccgctc cacccgggga atgcgcaaat ccccgtgggc acggcattgt cgagttccgt
     2401 aagtcgatct aaactggcca ctcataaccg aggcccccat gatcctgaac acgcgcaagc
     2461 acaacgatgt gctgatcctc taccccgaag gcaagatcac cctgggtgac ggcgaccagg
     2521 agctgggcga ggcggtccgc acctcgcttt cgaacggggc ccgcaagatc gtcatcaact
     2581 tcagcaaggt gagctacctg gattcctcag gcgtgggcga gctggtgggc tgctacacct
     2641 ccatcaagaa caagggcggc gacctgcg
//
LOCUS       DATGWW010000411         1741 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_304808, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000411 DATGWW010000000
VERSION     DATGWW010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304808"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            128..1420
                     /locus_tag="VK150_05945"
     CDS             128..1420
                     /locus_tag="VK150_05945"
                     /inference="COORDINATES: protein motif:HMM:NF025016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HLP30884.1"
                     /translation="MSPATPPKASFLAILTDLPKNVWHSLFRNPLPSNDLERSATSFT
                     NFFLHIHPVKVHKHSLKPTYTFGLGLISFFLFVILIVTGILLMFYYVPSTTQAYDRML
                     DLRGSVAFGTLLRNMHRWSAHGMVAVVFLHLCRVFLTGSYKKPREFNWVVGVILFLLT
                     LFMSFTGYLLPWDQLAFWAITVGTAIAGYAPIVGKDIQFLLMGGTSVGQEALLRFYVL
                     HVAVLPAILTLMIAIHFWRIRKDGGLSRPEDADPKPSLEAMENAVAPKASVPEPKKVY
                     GFQGLVRGPLTKVGQVPDNTVFSWPNLFLAELFTFVVTLSAILVLSLLFNAPLEEPVN
                     ALHPPNPAKAPWYFLGLQEMVSYSAFWGGIGVPTIFVLLLLVAPYLDRSPKGVGKWFS
                     RDRLLANTIFITFVVANIIFVIIGTFFRGANWAFVAPW"
     gene            1431..>1741
                     /locus_tag="VK150_05950"
     CDS             1431..>1741
                     /locus_tag="VK150_05950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30885.1"
                     /translation="MRLALAIGTFFILVIHGIVFYNQFFHQWERNQNAYFDQARVLAK
                     TDAERASLASRKPRIEQIVVSNFGETRVDRCTTCHIASDDPRFTAYAEPLKTHPYSTA
                     MG"
BASE COUNT          279 a          650 c          482 g          330 t
ORIGIN      
        1 aggacggcaa tgtgaccggc ggtcccgccc cgcgcccgct gccctggttc caggtcaccc
       61 tcgcgcccaa cggcgagatc gaagtggaca aggacattga aatcacccct gggagctacc
      121 tgaccctatg agccccgcga ccccgcccaa agcctccttc ctggccatcc tgacggacct
      181 gccgaagaac gtctggcact ccctcttccg gaacccgctc ccctccaatg acctggagcg
      241 gtcggccacc agcttcacga acttcttcct gcacatccac cccgtgaagg tgcacaagca
      301 ttcgctgaag cccacctaca ccttcggcct cggcctgatc tcgttcttcc tgttcgtgat
      361 cctgatcgtg acgggcatcc tgctgatgtt ctactacgtg ccctccacga cgcaggccta
      421 cgaccggatg ctggacctgc ggggctccgt ggccttcggc accctgctgc gcaacatgca
      481 ccgctggtcc gcccacggca tggtcgcggt ggtgttcctg catctctgcc gcgtgttcct
      541 cacgggctcg tacaagaagc cccgggagtt caactgggtg gtgggcgtga tcctcttcct
      601 gctcacgctc ttcatgagct tcaccggcta cctcctgcct tgggaccagc tggccttctg
      661 ggccatcacg gtgggcaccg ccatcgccgg ctacgccccc atcgtgggca aggacatcca
      721 gttcctgctc atgggcggaa ccagcgtggg ccaggaggcg ctgctgcgct tctacgtgct
      781 gcacgtggct gtgctgcccg ccatcctcac gctgatgatc gccatccact tctggcgcat
      841 ccgcaaggac ggcggcctct cgcgccccga agacgccgat cccaagccca gcctcgaggc
      901 catggagaac gccgtcgcgc cgaaagcctc ggtgcccgaa cccaagaagg tctacggctt
      961 ccagggcctg gtgcgcgggc ccctcaccaa ggtgggacag gtgccggaca acaccgtgtt
     1021 ctcctggccc aacctcttcc tggcggaact cttcaccttc gtggtgacgc tgtcggccat
     1081 cctcgtgttg tccctgctct tcaacgcgcc gctggaagag cccgtgaacg cgctgcatcc
     1141 gcctaatccc gccaaggcgc cctggtactt cctgggcctc caggagatgg tcagctactc
     1201 ggccttctgg ggcggcatcg gcgtgcccac catcttcgtc ctgctgctgc tggtcgcgcc
     1261 ctacctcgac cgctcaccca agggcgtggg gaagtggttc tcccgggacc ggctgctggc
     1321 gaacacgatc ttcatcacct tcgtggtggc gaacatcatc ttcgtcatca tcggcacctt
     1381 cttccgcggg gccaactggg ccttcgtggc cccctggtga ggagcgcgac atgagactgg
     1441 cactcgccat cggcaccttc ttcatcctcg tcatccacgg gatcgtgttc tacaaccagt
     1501 tcttccacca gtgggagcgc aaccagaacg cctatttcga ccaggcccgc gtcctggcga
     1561 agacggacgc ggagcgcgcc tctctcgcct cccggaagcc ccgcatcgag cagatcgtgg
     1621 tgagcaactt cggagagacc cgggtcgacc gctgcaccac ctgccacatc gccagcgacg
     1681 atccccgctt caccgcctat gccgagcccc tgaagaccca cccctactcc accgccatgg
     1741 g
//
LOCUS       DATGWW010000412         5388 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_30761, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000412 DATGWW010000000
VERSION     DATGWW010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5388
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30761"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..587)
                     /locus_tag="VK150_05955"
     CDS             complement(<1..587)
                     /locus_tag="VK150_05955"
                     /inference="COORDINATES: protein motif:HMM:NF014554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30886.1"
                     /translation="MDSHRIALDVMGGDHAPHATLQGAREALEAWPKLRLFLVGDLAH
                     LHPEMERHGFTAELMARAELVHASQTVVMEDKATCILKEKKDSSIRVAAQLVREGRAH
                     GVVSMGHTGAAMVASSLVIGKLDGVDRPALASVLPNMKGGPTVLLDVGANVDCRAEHI
                     AQFAVMGSVYAQEVLGIAQPKVGLLSVGEEDGKGTP"
     gene            complement(598..783)
                     /gene="rpmF"
                     /locus_tag="VK150_05960"
     CDS             complement(598..783)
                     /gene="rpmF"
                     /locus_tag="VK150_05960"
                     /inference="COORDINATES: protein motif:HMM:NF013908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HLP30887.1"
                     /translation="MPNPKRRHSKARRDRRRTHDALEVMSASTCPNCQTPKLPHRVCP
                     SCGFYRGKLAVRVSETA"
     gene            complement(828..1361)
                     /locus_tag="VK150_05965"
     CDS             complement(828..1361)
                     /locus_tag="VK150_05965"
                     /inference="COORDINATES: protein motif:HMM:NF014657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HLP30888.1"
                     /translation="MINLYNLPPEGLRLNGTTESVALEGDVRLRDLAWSVFALQSDGD
                     VFLEVKGHAVWQGACSRCLVPLDRPLAVESQFLGSKDADLVGRGSHTLGSQDLDVVFL
                     PEDTLDETELVREQFELQAPMHPLCVEDCKGLCPSCGKNWNKGPCQCRPESERAPSAL
                     NKALVKALAGIKLDRES"
     gene            complement(1358..1870)
                     /locus_tag="VK150_05970"
     CDS             complement(1358..1870)
                     /locus_tag="VK150_05970"
                     /inference="COORDINATES: protein motif:HMM:NF019934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HLP30889.1"
                     /translation="MRPATDRHPSRSKSRGFSLLELLVAMMIIAVLGTLGFSQYRKHS
                     AQARYLKAQDDLKIVAEGLDQYYLKHFRYPDFGSFDAMIEANSPLVKESLIKTGMSSQ
                     DPFNQPYEGKSTRDTYELKFIGDPNNPEDAGPVTRTPGQGAVMGSGPAAGGAPGATKT
                     DIPAEPGAKK"
     gene            complement(1960..3414)
                     /locus_tag="VK150_05975"
     CDS             complement(1960..3414)
                     /locus_tag="VK150_05975"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HLP30890.1"
                     /translation="MPLPSTQRILLVEDEPGLREVLTLALEGAGFLCEAASGIEEGQQ
                     ALKETAFDGVLSDLKLKDGSGIELLTWMKEQGLETPVVIMTAYATTETTVQALNQGAV
                     DFITKPFRHEDLIATLKGLLAAAEPEAPPPQDLGELVGVGPVMRKINALIGKVSRADT
                     TVLLTGESGTGKEVVARLIHRYSERAKGPFVAVNCGALPETLLESELFGFEKGAFTGA
                     GSMKRGLFEEAGGGILFLDEIGEMPLSLQVKLLRVLQERRFRRLGATEERAVDVRVIA
                     ATNRDLRARAETGAFREDLYYRLNILQIELPPLRERPEDLPVLAEHFIRRSCQKLGKP
                     PMPLHPETMAQLLGYRFPGNVRELENLMERCVALNPGGPITRDLLPEGLGAAVGEPVE
                     PRPAPLAIPPEGVDLEAWLNALKGHFLLRALDEVGGVKTKAGKRLGMTFRAYRYWLAE
                     LGGTEALPKAFPWPSDFPAPVVDEGGGTEGPKEA"
     gene            3508..4611
                     /locus_tag="VK150_05980"
     CDS             3508..4611
                     /locus_tag="VK150_05980"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HLP30891.1"
                     /translation="MKHVVFAHRKLSFGGGERVLLEQVAALADLPVKVTVLFRKEPGK
                     RDIEPELRARNPNVVEVIHLPGALASFRWLWRAQPDLLVLCNHKGVQRALPWLARLGV
                     RIPTLLTLHEHYERHLRKYRGVRHLVDRWLCTYDFTAAVREHLSAAPCSIIHPLYPRP
                     RALAATAAERRAARLQLGLRPEGPVVGYVGQIDGRKDPSGVVRFAEALGDVDLLFAGR
                     EEPETAAALDARLAASPLKARTRRLGPQADLRPAFTALDLYVMTSRNEGFFPLALIEA
                     LERGVPVLAPTVGGIGTMLRDGDGGFLLQKPDDRASVPEALLLAAAERLRPLLADEGA
                     WEIQRARAHAFGTSLTRDYDAGSKFREAVAPWL"
     gene            4602..>5388
                     /locus_tag="VK150_05985"
     CDS             4602..>5388
                     /locus_tag="VK150_05985"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HLP30892.1"
                     /translation="MAVIPEGATWIRFPRFVGDAAMQLPVLRLLRQIGVGPLVVWGPR
                     STVGLVEGTWFCDATLADEGKPGPLAMARILRQHRAARSIHFPKSLRPALAAWLARVP
                     ERIGVDESLAGPFNTHSGPFWEAEGPFLLRYHAVLARRWPDLPPMPFADFDPGVAIEA
                     PQERYLCFMPGSTWPSKAWPVDHFRALLLKARAEGFAVAVLGSPDEAATCAAVAGAEG
                     LDLCGRTSLKEAAAWMRGAAAVLGNDSGLSHLAAACGAPALALY"
BASE COUNT          731 a         1898 c         1896 g          863 t
ORIGIN      
        1 ggggtgccct tgccgtcctc ctcgccgacg ctcagcaggc ccaccttggg ctgggcgatg
       61 ccgagcacct cctgggcgta gaccgacccc atcaccgcga actgggcgat gtgctcggcc
      121 cggcagtcca cgttggcgcc cacgtcgagc agcacggtgg gcccgccctt catgttgggc
      181 aggacgctgg ccagggccgg acggtccacg ccgtcgagct tgccgatgac aaggctggag
      241 gccaccatcg cggcccccgt gtgccccatg gacaccacgc cgtgggcccg cccctcgcgg
      301 acgagctggg cggccacgcg gatggagctg tccttctttt ccttgaggat gcaggtggcc
      361 ttgtcctcca tgaccacggt ctgggaggcg tgcaccagct cagcccgggc catcagctcg
      421 gcggtgaacc cgtggcgctc catctcggga tggaggtggg ccaggtcgcc cacgaggaac
      481 aggcggagct tcggccaggc ctcgagggcc tcccgagctc cctgcaaggt ggcatggggg
      541 gcgtggtcgc cccccatgac gtccagtgcg atgcggtgac tgtccacccg ccggacctta
      601 ggcggtctcg gagacgcgca cggccagctt gccgcggtag aaaccgcagc tggggcacac
      661 gcggtgcggc agcttggggg tctggcagtt ggggcaggtg ctcgcgctca tgacctccag
      721 cgcgtcgtgg gtgcgccggc ggtcgcggcg ggccttggaa tggcggcgct tgggattcgg
      781 catggcttgc tcctaggagt agaacgcaaa gttccagatt aaggggttca ggattcccgg
      841 tccagcttga ttcctgcgag ggccttgacc agggccttgt tcagggccga cggggcccgc
      901 tcggactcgg gccggcattg gcaggggccc ttgttccaat tcttgccgca actggggcag
      961 agccccttgc agtcctcgac acagagggga tgcatggggg cttgcagctc gaactgctcc
     1021 cgcaccagct ccgtctcgtc cagggtgtct tccggcagga agaccacgtc gagatcctgc
     1081 gatccgaggg tgtgggagcc gcggcccacc aggtcggcgt ccttgctgcc caggaactgg
     1141 ctctccaccg ccagcggccg gtccaggggg accaggcagc ggctgcaggc gccctgccac
     1201 accgcatggc ccttcacctc gaggaacacg tcgccgtcgg actgcagggc gaacacggac
     1261 caggccaggt cccggagccg cacgtcgcct tccagcgcca cggattccgt ggtgccgttc
     1321 aggcggaggc cctccggggg caggttgtag aggttgatca cttcttggcc ccaggttccg
     1381 cggggatgtc ggtcttggtc gctccaggcg ctccgcccgc ggcgggtccg gaccccatga
     1441 ccgcgccctg gccgggcgtc cgcgtgacag ggccggcatc ctcggggttg ttgggatcac
     1501 cgatgaactt cagctcgtac gtgtcgcggg tggacttccc ctcgtagggc tggttgaagg
     1561 gatcctggga ggacatgccc gtcttgatga ggctttcctt caccagcggc gagttggcct
     1621 cgatcatggc gtcgaagctg ccgaaatcgg ggtagcggaa gtgcttgagg tagtactggt
     1681 cgaggccctc ggccacgatc ttgaggtcgt cctgggcctt gagatatcgg gcctgggcgg
     1741 agtgctttcg gtactgggag aacccgaggg tgcccagcac ggcgatgatc atcatcgcca
     1801 ccagcagttc cagcagcgag aagcctcggc tcttggagcg gctcgggtgg cggtcggtgg
     1861 cggggcgcat ggtcggggtc cgggaagagg ggtcggacgc tgagcatccg agcgtttcag
     1921 tgtgccagaa aaggccggaa ttgcaagcat tcatgggcat catgcctcct tggggccttc
     1981 ggttcccccg ccttcgtcca ccaccggcgc gggaaagtcc gagggccagg ggaacgcctt
     2041 cggcaaggcc tcggtgccgc cgagttcagc cagccagtag cggtaggctc ggaaggtcat
     2101 gcccaggcgc ttgccggcct tggtcttcac gccgcccact tcgtccaggg cccgcagcag
     2161 gaaatggccc ttgagggcgt tgagccaggc ctccaggtcg accccttccg gagggatcgc
     2221 caacggcgcg ggccgcggct cgaccggctc gccgaccgcg gcgcccaggc cctcgggcag
     2281 gaggtcccgg gtgatgggcc cgcccgggtt cagcgccacg caccgttcca tgaggttctc
     2341 caactcccgg acgttgccgg ggaaccggta gcccagcagc tgggccatgg tctccgggtg
     2401 cagcggcatg ggcggcttgc cgagcttctg gcaggagcgc cggatgaaat gctcggccag
     2461 cactggcagg tcctcgggac gctcgcgcag gggcggcagc tcgatctgga ggatgttcaa
     2521 gcggtagtag agatcctccc ggaaggcgcc ggtttcggcc cgggcgcgca ggtcgcggtt
     2581 ggtggcggcg atgacccgca cgtccacggc ccgctcctcg gtggcgccca ggcggcggaa
     2641 ccgccgctcc tgcagcaccc ggagcagctt cacctgcagg gacagaggca tctcgccgat
     2701 ctcgtcgagg aacaggatgc ccccgccggc ctcctcaaag agtccccgct tcatggagcc
     2761 ggcgccggtg aaggccccct tctcgaagcc gaagagctcg ctctccagga gggtctcggg
     2821 cagcgctccg cagttgacgg ccacgaaggg ccccttggcc cgctccgagt agcggtggat
     2881 gagccgggcc accacctcct tgcccgtgcc gctctccccg gtgagcagca ccgtggtgtc
     2941 ggcccgggac accttgccga tgagggcgtt gatcttgcgc atcaccggcc ccacgcccac
     3001 cagctcgccc aggtcctggg gcggcggggc ctccggctcg gcggcagcca gcaggccctt
     3061 gagggtggcg atgaggtcct cgtggcggaa gggcttggtg atgaagtcca ccgcgccctg
     3121 gttcagggcc tgcacggtgg tctccgtggt ggcgtaggcg gtcatgatga ccaccggcgt
     3181 ctccagcccc tgctccttca tccaggtcag cagctcgatg ccggagccgt ccttcagctt
     3241 caggtccgag agcacgccgt cgaaggccgt ctccttgagg gcctgctggc cctcctcgat
     3301 gccggaggcc gcctcgcaga ggaaccccgc gccctccagc gccagggtga gcacctcccg
     3361 gaggccgggc tcgtcttcca ccagcaggat ccgttgggtc gagggaaggg gcatggcaac
     3421 ctgtggggtg acgccatggg cgggtgggcc cgggcagtgt gacgtattgg gtcagtcatc
     3481 ctatcctgaa tcctttcctg gagtcccgtg aagcatgtcg tgttcgccca tcggaagctg
     3541 tccttcggcg gcggtgagcg ggtgctcctg gagcaggtgg ccgccttggc cgacctgccc
     3601 gtcaaggtca ccgtgctgtt ccgcaaggaa cccggcaagc gggacatcga accggagctg
     3661 cgggcgcgga accccaacgt ggtcgaggtg atccacctgc cgggcgccct ggcctccttc
     3721 cgctggctgt ggcgcgccca gcccgacctc ctggtgctct gcaaccacaa gggtgtgcag
     3781 cgggccctgc cctggctggc ccgcctgggc gtgcggatcc ccaccctgct caccctgcac
     3841 gagcactacg agcgccacct gcggaagtac cggggcgtcc ggcacttggt ggaccgctgg
     3901 ctctgcacct acgacttcac cgccgccgtg cgggagcacc tcagcgccgc gccgtgcagc
     3961 atcatccatc cgctctaccc ccgcccccgg gcgctggccg ccacggcggc ggaacggcgc
     4021 gcggcgaggc tccagctggg cctgcggccc gagggcccgg tggtggggta cgtgggccag
     4081 atcgatggcc gcaaggatcc ctccggggtc gtgcgcttcg ccgaggccct cggcgatgtg
     4141 gacctcctct tcgctggacg ggaggagccg gagaccgccg ccgccctcga cgcccgcctg
     4201 gccgcctcgc ccctgaaggc ccgcacccgc cgcctgggcc cgcaagccga cctccggccc
     4261 gccttcacgg ccctggacct ctacgtcatg accagccgga acgagggctt cttccccctc
     4321 gccctcatcg aggccctgga gcggggtgta cccgtgctgg cgcccaccgt gggcggcatc
     4381 ggcacgatgc tcagggatgg cgacggcggg ttcctgctcc agaagcccga tgaccgggcc
     4441 tccgtgcccg aggccctgct gctggccgcc gccgagcgcc tgaggcccct gctggccgac
     4501 gaaggcgcct gggagatcca gagggcccgg gcccacgcct tcggcacatc cctcacccgc
     4561 gactacgacg ccggatcgaa attccgcgag gcggtggcgc catggctgtg attcccgaag
     4621 gggccacctg gattcgcttc ccgcgcttcg tgggcgacgc cgccatgcag ctgccggtgc
     4681 tgcggttgct ccgccagatc ggcgtgggcc ccctggtggt ttggggcccc aggagcaccg
     4741 tgggcctggt ggagggtacc tggttctgcg acgccaccct ggccgatgag gggaagcccg
     4801 gtcctttggc catggcccgc atcctccggc agcaccgggc cgcccggagc atccacttcc
     4861 cgaaatcgct gcgcccggcc ctggccgcct ggctggcccg ggtgcccgag cgcatcggcg
     4921 tggacgaaag cctggcgggc cccttcaaca cccacagcgg gcccttctgg gaagccgagg
     4981 gccccttcct cctgcggtac cacgccgtgc tcgcgcggcg ctggccggac ctgccgccca
     5041 tgcccttcgc cgacttcgat ccgggcgtgg ccatcgaggc accgcaggag cgctacctct
     5101 gcttcatgcc cggctccacc tggccctcga aagcctggcc cgtggatcac ttccgggcgc
     5161 tcctcctgaa ggcccgggcc gagggcttcg ccgtggcggt gcttggatcc ccggacgaag
     5221 ccgccacctg cgccgcagtg gcgggcgccg agggcctgga tctctgcggc aggacgtccc
     5281 tcaaggaggc cgccgcctgg atgcgcggcg ccgccgcggt gctgggcaac gactcgggcc
     5341 tcagccacct cgcggctgcc tgcggggccc ccgccctggc cctctacg
//
LOCUS       DATGWW010000413         2796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_78031, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000413 DATGWW010000000
VERSION     DATGWW010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2796
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78031"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..761)
                     /gene="fsa"
                     /locus_tag="VK150_05990"
     CDS             complement(114..761)
                     /gene="fsa"
                     /locus_tag="VK150_05990"
                     /inference="COORDINATES: protein motif:HMM:TIGR00875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HLP30893.1"
                     /translation="MKFFIDTANIDEIKRINALGVLDGVTTNPSLIAKETGKPFEEII
                     AEICGIVDGPISAEVIGLEAPGMIEEGRRLAKIHKNVVVKLPLIAEGLKACKALTAEG
                     IHTNVTLCFSATQALMAAKAGATYVSPFVGRLDDINLDGMELIREICAIFENYGFGTQ
                     VLSASIRSPRHVTDSALAGAHVATIPTKVFDQMIKHPLTDKGVEGFLADWKKSGR"
     gene            complement(900..>2796)
                     /locus_tag="VK150_05995"
     CDS             complement(900..>2796)
                     /locus_tag="VK150_05995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30894.1"
                     /translation="PPSPDGPTELKVSIFQQPALLRFTWSRPTQAFDGYEFEGKVGAG
                     AYSKLNQSLIPNTWTEAYLDMTGGAPELETCTFRMWVMRGTTASPYSNEASVRIPMTP
                     PTINAYSGQGGLNVSWWNGSSVADTLKLERGVVDGANTTWTSIPTVTFGTTSWLDTSA
                     PEGASCSYRVTYSKGSDSVNAASYPVTSPMAVPGQPVATPLVEGVQLSWTNPSLVATD
                     VAIMRASGLDAYPSYQQVAVVPLGTTSYTDQSLATGYYTYRLENRKAGLSSTYSSPAQ
                     VATLPPQNGASIRPTILGLPQANILRRTSLGAWVLGGSYQYDIQVREPAGNNWITYTP
                     NSAQSWSYPYFLLDSHDQPHMVYTRQVMQGSSEVALMHAWRQDAAWQVEEIARRTLYS
                     SSATNGFTFALDATDRLHLVWLKSGGAAADLEYAIKGADGVWTIEAPTSIATASLLGT
                     YKLAVDPTGQPHLFIGAWQELYHLTRTAGTWAQESIPAPGVSVGWYDFMGCAAMAPDA
                     CAVLVMRPHQPYDGKADLVMIRKDAGTWQAGEVVFTTDAYLSFQGILTPNKSGSKLAL
                     YHVSSSGGVLRVWSAGAWTSTVVGPSNYGLPVLGFDPADRIYLLMSAGWGGSSSLYPY
                     VLYTEAP"
BASE COUNT          473 a          817 c          994 g          512 t
ORIGIN      
        1 ggcccccgcc acgatcttgc agaacacaca ctcggccgcg ggcttcaggg ccggcgccgg
       61 cgcctgggcc gccgtcagcg cgagggcggc gaagaggggc aggaggcggc gcatcagcga
      121 ccgctctttt tccaatccgc caggaaaccc tccacgccct tgtcggtgag ggggtgtttg
      181 atcatctggt cgaagacctt ggtggggatg gtggcgacgt gggcgccggc cagggccgag
      241 tcggtgacgt ggcgggggct gcggatgctg gcggagagca cttgcgtgcc gaagccgtag
      301 ttctcgaaga tggcgcagat ctcgcggatc agctccatgc cgtccaggtt gatgtcatcg
      361 aggcggccca cgaagggcga cacgtaggtg gcgccggcct tggcggccat gagggcctgc
      421 gtggcgctga agcagagggt gacgttggtg tggatgccct cggccgtgag cgccttgcag
      481 gccttgaggc cttcggcgat caggggcagc ttcaccacca cgttcttgtg gatcttggcc
      541 aggcgccggc cctcctcgat catgccgggg gcctccaggc cgatgacctc ggcgctgatg
      601 gggccgtcca cgatgccgca gatctccgcg atgatctcct cgaagggctt gcccgtttcc
      661 ttggcgatga ggctggggtt cgtggtcacg ccatccagca cgcccagagc gttgatgcgc
      721 ttgatctcgt cgatgttggc agtgtctatg aagaacttca tggtctagct ccggagggcg
      781 tggtgtggat tggggcgatt tcgggcgtcg gtccgaaggg ccagacttcc attctcccac
      841 ggccaccagg aaagccgaag ggcccggttt cccgggccct tcgggcggaa tcggtcaaat
      901 catggcgctt ccgtgtagag cacgtaggga tagaggcttg aactgccacc ccagccagca
      961 gacataagaa ggtagatcct atctgctgga tcgaacccta acacgggtaa gccgtaattg
     1021 ctgggaccga ccacggtgct ggtccaggcc cccgcgctcc agacgcgcag cacgcctccg
     1081 ctggaagaaa catggtagag ggcgagcttg gatccgctct tgttgggggt caggatgcct
     1141 tggaaggaaa ggtaggcatc ggtggtgaac accacttcgc cggcttgcca ggttcccgca
     1201 tccttccgaa tcatgacgag gtcagccttt ccgtcgtagg gctggtgggg gcgcatgacc
     1261 agcacggcac aggcatctgg cgccatcgcg gcgcagccca tgaagtcgta ccagcccacg
     1321 gagacgcccg gggccggaat ggattcctgg gcccatgttc cagcggtccg ggtcaggtgg
     1381 tagagctcct gccaggcgcc gatgaacagg tgcggctgac ccgtcggatc cacggcgagc
     1441 ttataggtgc caaggaggga agcggtggcg atgctggttg gtgcttcgat ggtccagacg
     1501 ccatcggcgc ccttgatggc gtattccagg tcggcggcgg ccccgcctga tttgagccag
     1561 acaaggtgca gacggtccgt ggcgtcgagt gcaaaggtga atccattcgt cgccgacgag
     1621 gagtagaggg tcctccgggc aatctcctcg acctgccagg cggcatcctg cctccacgca
     1681 tgcatgaggg ccacctccga gctgccctgc atgacctgcc gcgtgtagac catgtgcggc
     1741 tgatcgtggc tgtcgagcag gaaataggga taagaccaag actgggcgct gttgggtgtg
     1801 taagtgatcc agttgtttcc ggcgggctcg cggacctgga tgtcgtactg gtaggaccca
     1861 cccaagaccc aggctcccaa gctggtcctc cggaggatgt tggcctgagg cagtccgagg
     1921 atcgtcggcc tgatcgaggc gccgttctgg ggcgggaggg tcgcgacctg ggccgggctc
     1981 gagtaggtgg agctgaggcc cgccttgcgg ttctccagcc gataggtgta gtagccggtg
     2041 gccaaggatt ggtccgtata ggacgtggtg cccaggggga ccacggccac ctgctggtag
     2101 gacgggtagg catccagacc cgaagcacgc atgatggcga cgtcggtggc caccaggctc
     2161 gggttcgtcc agctcaactg aacaccctcg acgaggggcg tggcgaccgg ctggcccggc
     2221 accgccatgg gcgaggtgac ggggtacgag gccgcgttga ctgaatccga ccccttgctg
     2281 taggtcaccc gatagctgca gctcgcgcct tcgggggcgg aggtgtcgag ccaggaggtg
     2341 gttccgaagg tgacagtcgg gatggaggtc caggtcgtgt ttgcaccgtc gaccacaccg
     2401 cgttcgagct tcagggtgtc cgcgacggaa ctgccgttcc accaggacac gttgaggccg
     2461 ccctggcccg agtacgcatt gatcgtcgga ggggtcatcg gtatccggac gctggcctca
     2521 ttgctgtagg gagaagccgt ggttcccctc atcacccaca tccggaaggt gcaggtctcc
     2581 agttccgggg cgccgccggt catgtccagg taggcctcgg tccaagtgtt tggaatcagg
     2641 gactgattca gtttggaata ggcgccagca ccaacctttc cctcgaattc gtagccatca
     2701 aaggcctggg tcggccggga ccaggtgaac cggaggaggg ccggttgctg gaagatggag
     2761 accttgagct ccgtcgggcc gtctgggctg ggcggg
//
LOCUS       DATGWW010000414         1571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_78041, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000414 DATGWW010000000
VERSION     DATGWW010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78041"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="VK150_06000"
     CDS             complement(<1..642)
                     /locus_tag="VK150_06000"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLP30895.1"
                     /translation="MSEPAWPAPPEGTCTLPTTLDAEVAILGAGIHGAALARELTLRG
                     VSCALVDKGEVGGGTSQWSSQLLHGGIRYMLTGDIRQMREGLAERATWARIAPARCRW
                     EAFWMPHRFWVEGLAHRIGIGLYDHWGAERPGWPSALALGPIPRETYRGDPRSAQAPF
                     RGATAYADLMTWDRALTRDLAASSDALRLDFHDPEAFEDTAGELKAFRLRDRRD"
     gene            693..>1571
                     /locus_tag="VK150_06005"
     CDS             693..>1571
                     /locus_tag="VK150_06005"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLP30896.1"
                     /translation="MSPTRLRTVLNLTVLVAALGYFVDMFDLLLFPIVRQPSLTALGV
                     PASQQIEIGAQLLNWQMGGMLLGGIFWGVLGDKKGRLSTLFGSIALYSIANLANAFVQ
                     SVPAYAFWRFLAGLGLAGELGAAVTMVSEILPKDLRGYGTAIVAAVGIFGAVTAKLVG
                     DFFPWRVTYAVGGGLGVALLFLRVGIRESFMFAKTHETTVARGDFLSLFTDWGRLGRY
                     VRCILIGLPTWYVVGILITFSPEFAPVLKVQGPVSAGTAVAFCYTGITLGSVLSGFLS
                     QAWHTRKKVVGWFVAGA"
BASE COUNT          213 a          543 c          552 g          263 t
ORIGIN      
        1 gtcccgccgg tcccgaagcc ggaaggcctt cagctcgccc gcagtgtcct cgaaggcttc
       61 agggtcgtgg aaatccaggc gcagcgcatc gctggaggcc gccagatccc gagtcagggc
      121 gcggtcccag gtcatgaggt cggcgtaggc ggtggccccg cgaaaggggg cctgcgcgct
      181 ccggggatcc ccacggtagg tctcgcgggg gatgggcccc agggccaggg ccgacggcca
      241 gcccgggcgt tcggcgcccc agtggtcgta gaggccgatg ccgatgcggt gggccaggcc
      301 ctccacccag aaacggtgag gcatccagaa ggcctcccag cggcagcgcg cgggggcgat
      361 gcgggcccag gtggcgcgct cagccaagcc ttcccgcatc tggcggatgt cgcccgtgag
      421 catgtaccgg atgccgccgt gcagcagctg gctggaccac tggctggtgc cgccgcccac
      481 ttcccctttg tccaccaggg cgcaggacac gccccggagc gtgagttccc gggccagggc
      541 ggcgccgtgg atgccggcgc ccaggatggc aacctcggca tccagggtgg tcggcagggt
      601 gcaggtgcct tccggcgggg cgggccaggc gggttcggac atgggcacct cccaagcagt
      661 gtgccgtgtc cctgtgattc aatgaagcca ccatgagccc cacacgcctc cgcaccgtcc
      721 tgaacctcac cgtcctggtg gccgccctgg gctacttcgt cgacatgttc gacctgctgc
      781 tcttccccat cgtgcgccag cccagcctca cggccctggg cgttcccgcc tcgcagcaga
      841 tcgagatcgg cgcccagctg ctcaactggc agatgggcgg catgctgctg ggcggcattt
      901 tctggggtgt gctgggcgac aagaagggac gcctctccac gctgttcggc agcatcgcgc
      961 tgtactcgat cgcgaacctg gccaacgcct tcgtccaatc ggtgccggcc tacgccttct
     1021 ggcggttcct ggcggggctc ggcctcgcgg gcgaactggg cgcggcggtc accatggtct
     1081 cggagatcct gccgaaggat ctccgcggct acggtaccgc catcgtcgcg gccgtgggca
     1141 tcttcggggc cgtgaccgcg aagctcgtag gcgacttctt cccctggcgc gtgacctacg
     1201 ccgtgggcgg agggctgggc gtggccctgc tcttcctgcg cgtcggcatc cgggagagtt
     1261 tcatgttcgc caagacccac gagaccacgg tggcccgggg cgacttcctg agcctgttca
     1321 cggactgggg ccgcctgggc cgctacgtcc gctgcatcct catcggcctg cccacctggt
     1381 acgtggtggg catcctcatc accttctcgc cggaatttgc gccggtgctg aaggtgcaag
     1441 gtccagtctc ggcgggcacc gcggtggcct tctgctacac gggcatcacc ctcggcagcg
     1501 tgctgagcgg atttcttagc caggcctggc acacccgcaa gaaagtggtc ggctggttcg
     1561 tggcgggggc g
//
LOCUS       DATGWW010000415         4776 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_31022, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000415 DATGWW010000000
VERSION     DATGWW010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4776
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31022"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..595)
                     /locus_tag="VK150_06010"
     CDS             complement(<1..595)
                     /locus_tag="VK150_06010"
                     /inference="COORDINATES: protein motif:HMM:NF012662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HLP30897.1"
                     /translation="MGLLGGLINQFKKGLKRTQELVLAPMGRLLGLRRLDEAQLEEME
                     DLLLQADLGVKAVDQLMARLRAELKGDREIDPKAVLKDELLKLLRQRPAQPFTAAGTQ
                     VVLLVGVNGVGKTTTLGKLAAHLKARGDGVLVVAGDTFRAAAIDQLERWGERAGVPVI
                     RNQMGGDPAAIAFDGATSAQAKGTPWVLIDTAGRLQNK"
     gene            717..1808
                     /locus_tag="VK150_06015"
     CDS             717..1808
                     /locus_tag="VK150_06015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30898.1"
                     /translation="MTPLPLPAPDPLPLPMAPAALKALLLLTFTLHLMAVNLGVGGSV
                     ITALHALRGTPRDRDLVRRIAPMLPSAVTFAITLGVAPLLFLQLTYGPFFYTASVLTA
                     VPWLAMIFLLMAGYTLLYRFTGSAGSERLHAASGIAGALLLLAVGLMLVNVTTLSLRP
                     DLWAAHAAASPHGLRMNTADPTLWPRYLHMAAGILAVAGLLLAGWGAWRDHAFARMAG
                     LRWFIGATASQAAWGTWLLVKQPKPVLDLLLDGVSAPSLTLWLGVACGALALFMAIPA
                     SQEGSPARAVWGPFGLGLASTLGMIVLRDQARDASLAAFGFHPGALPHRTDWLSLGVF
                     GLTFLGLAVLLIVVLRWAAQPIPAAPDAE"
     gene            1818..3137
                     /locus_tag="VK150_06020"
     CDS             1818..3137
                     /locus_tag="VK150_06020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HLP30899.1"
                     /translation="MNHPVWDIPFLGSGWIIGIISIIHVSIAHLVVGAGIWLAWLAGR
                     AQGGGDRALSGWLRQRTRALLWLSSIFGAGTGVGIWVAIGLVNPTATQHLIRGFVMGW
                     AIEWLLFAGEMATLIVLVRAYDRLRPRQRLAVYWLYALCAWLSLVVINGIVTFMLSPG
                     QGWTTTHAMWDGFFNATYLPSLLLRTLVSLALGGLWALAAGAVADADLRPRILQPTAW
                     FTLAGVLLAPLAGWYYFRSFPPAARELVLGNLQGATGLAQGFRWALWGLGAFLVPALL
                     AAWARVSPASFRRPAALVGLLLACWGFGGFEWIREVARKPYVIRDVMYSNGIRVDEVE
                     AYQREGFLARNAWARTFAASKGDTDLARGEALVRSQCLACHTREGYRSLKALTAANAP
                     EDNGIFVQGLRGLDPAMNPYLDRMPPFAGTDEEAELAGKYLASLKGK"
     gene            complement(3190..3570)
                     /locus_tag="VK150_06025"
     CDS             complement(3190..3570)
                     /locus_tag="VK150_06025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30900.1"
                     /translation="MLTEAFTLVMQLPPLAFGPAWPGEAFRMPRELTCPARDLGRIQA
                     TATPPPLLAGRPGLDPRSLRPTPHRHLIHPAAEFALLMGAMAAVHGTWDDRTWSTRAW
                     DATGAVTPVLIPPQVPPMWDPGRR"
     gene            complement(3636..>4776)
                     /locus_tag="VK150_06030"
     CDS             complement(3636..>4776)
                     /locus_tag="VK150_06030"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF017200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S16 family serine protease"
                     /protein_id="HLP30901.1"
                     /translation="HQVKSMNPVIMLDEVDKIGRDMRGDPSAALLEVLDPEQNHTFRD
                     HYLNVPLDLSQVLFLANANELEPIHPAFKDRMEIIYLSSYTLEEKIGIAEQHLIPKQL
                     EKHGVTRQQVSIPKKALKAIITGYTREAGLRQLEREIGAVCRKVARRVAEKRLKKRLV
                     LDDKSIHELLGPVKLLQDERLKAPRVGVVTGLAWTAVGGDVLFVEALRMPGKGLLTLT
                     GQLGDVMKESAQAALSYIRSRGDAFQIDPEVFQKQDIHVHFPEGAIPKDGPSAGLAIA
                     TVLLSVLKGIPVKNTLAMTGEIDLRGEALAIGGLKEKSLAALRVGIKDILIPHANQKD
                     LEEIDPELRKQLRFHPVKHVEEVFEHALVGWKRPEAASVRGRAKR"
BASE COUNT          577 a         1706 c         1667 g          826 t
ORIGIN      
        1 ccttgttctg caggcgcccg gcggtgtcga tgagcaccca gggcgtgcct ttggcctggg
       61 cgctggtggc gccgtcaaag gcgatggcgg ccgggtcgcc gcccatctgg ttgcggatga
      121 cgggcacccc ggcccgctcg ccccagcgtt ccaactggtc gatggcggcg gcgcggaagg
      181 tgtcccccgc caccaccagc accccgtcgc cccgggcctt gaggtgggcg gccagcttgc
      241 cgagggtcgt ggtcttgccg acgccgttga cccccaccag cagcaccacc tgggtgcctg
      301 ccgccgtgaa cggctgggcg gggcgctggc gcaggagctt cagcagttca tctttcagca
      361 cggccttggg atcgatctcg cgatcgccct ttagttcggc gcggagccgc gccatgagct
      421 gatccacggc cttcacgccc aggtcggcct ggagcagcag gtcctccatc tcctccagct
      481 gggcttcgtc cagccgccgc aggccgagca ggcggcccat gggggccagc accagctcct
      541 gggtgcgctt caggcccttc ttgaactggt tgatcaggcc gccgagcaga cccacggaca
      601 cctcgcgaac ccccagtcta cccaagcctt gggggatctc tggatccaga atcgccggct
      661 tggcggtacc ctgggcgggc ttcatcctgt cgagacagcc acggactgga ggatcgatga
      721 cacccctgcc cctgccggcc ccggatccac tgcccctgcc catggcgccc gccgcgctga
      781 aggccctgct gctgctgacc ttcaccctgc acctcatggc ggtgaacctt ggcgtgggcg
      841 gcagcgtcat caccgccctc cacgccctgc gcggcacgcc gcgggaccgg gacctggtgc
      901 gccgcatcgc gcccatgctg ccctcggccg tgaccttcgc catcaccctg ggcgtggcgc
      961 ccctgctctt cctccagctc acctacggcc ccttcttcta caccgcctcg gtgctgaccg
     1021 cggtgccctg gctggcgatg atcttcctgc tcatggcggg ctacacgctg ctctaccgct
     1081 tcacgggttc ggcgggatcc gagcgcctcc acgccgccag cggcatcgcc ggggcgctgc
     1141 tcctgctggc cgtggggctg atgctcgtga acgtcaccac cctctcgctg cggcccgacc
     1201 tctgggccgc ccacgccgcg gcctcgcccc acggcctccg catgaacacg gcggatccca
     1261 ccctctggcc aaggtacctc cacatggcgg cagggatcct cgcggtggcc gggctcctgc
     1321 tggccggctg gggcgcctgg cgggaccacg ccttcgcccg gatggccggc ctgcgctggt
     1381 tcatcggcgc cacggccagc caggcggcgt ggggcacctg gctgctggtc aagcagccga
     1441 agcccgtgct ggacctgctc ctggacgggg tgtcggcccc cagcctcacc ctgtggctcg
     1501 gcgtcgcctg cggggccctg gctctcttca tggccattcc cgccagccag gagggttctc
     1561 ccgcccgggc ggtgtggggc cccttcggcc tgggcctggc ctcgaccctg ggcatgatcg
     1621 tcctgcggga ccaggcgcgg gacgccagcc tcgccgcctt cggtttccac cctggagccc
     1681 tgccccatcg cacggactgg ctgtccctgg gggtgttcgg cctgaccttc ctgggcctcg
     1741 cggtgctgct gatcgtggtc ctccgctggg ccgctcaacc catccccgcc gcgcccgacg
     1801 ccgagtagga ggcccccatg aaccatcccg tgtgggacat ccccttcctc ggcagcggct
     1861 ggatcatcgg catcatcagc atcatccacg tctccatcgc ccacctggtg gtgggggccg
     1921 gaatctggct ggcctggctg gcgggccggg cccagggcgg gggcgaccgg gcgctctccg
     1981 gctggctgcg ccagcggacc cgggccctgc tctggctgtc gagcatcttc ggcgcgggca
     2041 ccggggtggg catctgggtg gccatcggcc tggtgaatcc caccgccacc cagcacctca
     2101 tccggggctt cgtcatgggt tgggctatcg aatggctgct cttcgcgggc gagatggcca
     2161 cgttgatcgt gctggtgcgg gcctacgacc gcctgcggcc ccggcagcgc ctggccgtgt
     2221 actggctgta cgcgctctgt gcctggctga gcctggtggt gatcaacggc atcgtcacct
     2281 tcatgctcag ccccggccag ggctggacca ccacccacgc catgtgggac ggcttcttca
     2341 atgccaccta cctgccgagc ctgctgctcc gcacgctggt ctccctggcc ttgggcgggc
     2401 tctgggccct ggccgcgggc gcggtggccg acgcggacct gaggccccgg atcctccagc
     2461 ccacggcctg gtttaccctg gcgggggtcc tgctggcgcc cttggccggc tggtactact
     2521 tccgcagttt cccccccgcc gcccgggagc tggtgctggg caacctgcag ggcgccaccg
     2581 gcctggccca ggggttccgc tgggcgctct ggggcctggg cgccttcctg gtgccggcgc
     2641 tgctcgccgc gtgggcgcgg gtctcgcccg cctccttccg ccgtcccgcg gccctggtgg
     2701 gcctgctgct cgcctgctgg gggttcggcg gcttcgagtg gatccgggag gtggcccgca
     2761 agccctacgt catccgcgac gtgatgtatt cgaacggcat ccgggtcgac gaggtggagg
     2821 cctaccagcg ggagggcttc ctggcccgga acgcctgggc gcggaccttc gccgcctcga
     2881 agggtgacac ggacctggcc cggggcgagg ccctggtccg cagccagtgc ctcgcctgcc
     2941 acacccggga gggctaccgc agcctgaagg ccctcacggc cgccaatgcc cccgaggaca
     3001 acgggatctt cgtccagggg ctgaggggcc tggatccggc catgaatccc tatctcgacc
     3061 gcatgccgcc cttcgcgggg acggatgaag aggcagagct ggcggggaag tacctggcct
     3121 cgctgaaggg taagtagtgt tccacgtgga actaccgggg gtggctccag gttctgggcc
     3181 gcgccgggat tagcgtcggc ccgggtccca catgggcggg acctggggcg gaatcagcac
     3241 cggggtgacg gcgcccgtgg catcccaggc gcgggtggac caggtgcgat catcccaggt
     3301 gccgtggacc gcggccatgg cgcccatgag cagggcgaac tccgcggcgg ggtgaatgag
     3361 gtggcggtgc ggcgtggggc gcaggctgcg gggatccagc cccgggcgcc ccgcgaggag
     3421 gggcggaggc gttgcggtgg cctggatccg gcccaggtcc cgggcggggc aggtgagctc
     3481 ccgcggcatc cggaaggcct cccccggcca ggctggaccg aaggccagcg gcggaagctg
     3541 catcaccagg gtgaaggcct cggtcagcat ggccaccctc cggtgacaac gtacggtctt
     3601 acgtggcggg cggcaagtgt tgatgtaatt gtttgttaac gtttggcgcg gcccctgacg
     3661 gatgcggcct cgggccgctt ccagcccacc agggcgtgct cgaagacctc ctccacgtgc
     3721 ttcacggggt ggaaccgcag ctgcttgcgc agctcggggt cgatctcttc gaggtccttc
     3781 tggttggcgt gggggatgag gatgtccttg atgcccaccc gcagggccgc cagggacttc
     3841 tccttgaggc cgccgatggc cagggcctcg ccgcgcaggt cgatctcccc ggtcatggcc
     3901 agggtgttct tcacgggaat gcccttcagc acggagagca gcaccgtggc gatggcgagt
     3961 ccggcgctgg ggccgtcctt ggggatggcg ccctcgggga agtgcacgtg gatgtcctgc
     4021 ttctggaaga cctcggggtc gatctggaaa gcgtcgccgc ggctgcggat gtagctgagg
     4081 gccgcctggg cgctttcctt catcacgtcg cccagctgcc ccgtgagggt gagcaggccc
     4141 ttgcccggca tgcgcagggc ctcgacgaac agcacgtcgc cgcccaccgc ggtccaggcg
     4201 aggccggtca ccacgcccac ccgcggggct ttgaggcgct cgtcctgcag cagcttcacc
     4261 gggcccagca gctcgtggat gctcttgtcg tccaggacca gccgcttctt caggcgcttc
     4321 tccgccacgc ggcgggccac cttgcggcag acggcgccga tctcgcgttc cagctggcgc
     4381 aaccccgcct cccgcgtgta gcccgtgatg atggccttga gggccttctt cgggatggag
     4441 acctgctggc gcgtgacgcc gtgcttctcc agctgcttgg ggatcaggtg ctgctcggcg
     4501 atgccgatct tctcctccag cgtgtagctg ctgaggtaga tgatctccat gcggtccttg
     4561 aaggccgggt ggatgggctc cagctcgttg gcgttggcca ggaacagcac ctggctgagg
     4621 tccaggggca cgttcaggta gtggtcgcgg aaggtgtggt tctgctcggg atcgagcacc
     4681 tccagtagcg ccgcgctcgg gtcgccacgc atgtcgcggc cgatcttgtc cacctcgtcg
     4741 agcatgatca cggggttcat gctcttcacc tggtgc
//
LOCUS       DATGWW010000416         2841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_151500, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000416 DATGWW010000000
VERSION     DATGWW010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2841
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151500"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VK150_06035"
     CDS             <1..328
                     /locus_tag="VK150_06035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30902.1"
                     /translation="QRTKAWHRGSRLTAKGHNPHRVLEVCGLCGQHVLVEPAEDPSTL
                     CRAARPRWVHAALLVPYQEGWSPPELVWDEEEPVASLRGAAAVVPLEEAGEQTRRRRP
                     RRAAVP"
     gene            complement(676..1140)
                     /locus_tag="VK150_06040"
     CDS             complement(676..1140)
                     /locus_tag="VK150_06040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30903.1"
                     /translation="MPAGDATPAQEEAYLQAIIRRVEVIHDRTAARLTRHDKQLRAAQ
                     RRHDARAVAPATMFLFAPGDLVLQRTKAWHRGSRLTAKGHGPYRVLEVRGLCGQRVLV
                     EPAEDPSTRRRARPHWVHAALLVPYLEGWSPPELVWDEEEPVASSRGAAQQS"
     gene            complement(1888..2655)
                     /locus_tag="VK150_06045"
     CDS             complement(1888..2655)
                     /locus_tag="VK150_06045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHD finger domain-containing protein"
                     /protein_id="HLP30904.1"
                     /translation="MMVRLLLGIYRKARKPSLYLTVEGVRTLARRLRWQIAFRYIPRQ
                     LNAIPDDMCRRAEASEAIVEYVDGAIPADAPQLDLDSFYRVVDGLAQGARQVAYTGSH
                     VAPAGLPGAPAGDPIGGAGGRAEDWATEPDGAEAVMAAWDDRLRGVPCGTCTGLDHEE
                     DMLVCDRCGTPHHQECQPHSPAGDGPWYCGQCRGTIRLQGSTDPVEDLELLDYLFRGI
                     LPDDLDVSERVRRLAGSYRARGQELETLANPYGLEAL"
BASE COUNT          484 a          962 c          930 g          465 t
ORIGIN      
        1 ccagcggacc aaggcctggc accgggggag taggcttacc gccaaggggc ataaccccca
       61 ccgggtgctg gaggtgtgcg gcctttgcgg ccagcacgtc ctggtggagc cagctgagga
      121 cccatccacc ctctgccgcg ccgcgcgccc gcgctgggtg catgcggcac tactagtccc
      181 ctaccaggag ggctggtctc ctccagagct tgtctgggac gaggaggagc cagtggcgag
      241 cttgcgcggt gctgcggctg ttgtgccgct ggaggaggct ggggagcaga cccggcggag
      301 gaggccccgc cgcgctgcgg tgccctgatg tcaccagtta ccggtacgtt ggggggggga
      361 tactgacccc tgggcgacct gccaccgcgg cacgtcccca ggagttgggg ttacccgcag
      421 gttggcaggt ggagcatcgc tggctggtga ggagcgctta cctggcgccc caccatccct
      481 atgggcggca gcaagccgca ggagctggag ggctacccgc gcggctggag cgcggggtag
      541 cttaggagtc ttggcgcggc tgctatggcc gtggtatgga gccagagcgg gccatccggc
      601 ccttgtggag ctggcgctgg aggtttgcgg ccgcatgacg gcagcggctg ctatgcaggg
      661 ctgctatgcg gcacattagg attgctgtgc ggcgccgcgc gagctcgcca ctggctcctc
      721 ctcgtcccag acaagctctg gaggagacca gccctccagg taggggacta gtagtgccgc
      781 atgcacccag tgcgggcgcg cgcggcggcg ggtggatggg tcctcggctg gctccaccag
      841 gacgcgctgg ccgcaaaggc cgcgcacctc cagcacccgg taggggccat gccccttggc
      901 ggtaagcctg ctcccccggt gccaggcctt ggtccgctgg aggaccaagt cacccggcgc
      961 gaacaaaaac atggtcgcgg gtgcgaccgc acgcgcatca tggcgccgct gagcagctcg
     1021 aagctgcttg tcatgccggg tcagacgcgc tgccgtacgg tcgtggatga cctccacgcg
     1081 gcggatgatg gcctgcagat aggcctcctc ctgggctggg gtggcatccc cggccggcac
     1141 ctcctcagct ccctccggca gctaggacgg gagcacaggc accccccccg tgatgatggt
     1201 gaatgggggg agcccatgtg acgcagcagg tgtcatgcgg agcgctacaa gcgcgtacgg
     1261 tagcacatca ctccaatgga gtgctggctg gcggccaaga tagcggcgga tgacggactt
     1321 cacagtccga atcatccgct caacctaccc attggcacgg ctgttcccca cggtccccta
     1381 gcggaccgcg atgtggagcc ggcggagcta agcaccaaac tccgcctccc acttggaccc
     1441 atggtccagg cggacaaagg ctgggcgccc ccagcgacac accacagcgt catacagcca
     1501 agctgcagtg gtgaaggccc tcttgttggg gatggcgtct gcctccaccc acttggtgaa
     1561 gacatcgacg gcaatcgcga ggtagcgatt accgtcagca tctggtggaa aggggccagc
     1621 taggtcgacg gaccagccct agaaggggcc gcctgggcgg tcggctgcga ctgggggcag
     1681 ctcagtagct ctctctcccc ccacatgctc tggctggcag gctgggcaac gggctatctc
     1741 ctccacgacc tgggtcctaa gccccggcca ccaatacgcc gccagcagcg cctctgatag
     1801 acgggcgcgt ccaacatgcc cagctgcctc atgggtgtcg cggactatgt ctgcccgcat
     1861 ggcaactggg ggcaccacta cccaacgcta tagggcctcc aagccatagg ggttggctag
     1921 agtctctagc tcctgacccc tggccctgta gctgccagcc agcctcctga cgcgctctga
     1981 gacgtccagg tcatccggga ggatgccgcg gaacaaatag tccagcagct ccaggtcctc
     2041 taccggatcc gtcgacccct ggagccggat ggtgcctcgg cactggccgc agtaccaggg
     2101 gccgtcgcct gctgggctat gaggctggca ctcctggtgg tgtggggtcc cacaccggtc
     2161 gcagacaagc atgtcctcct cgtggtccaa tccggtgcag gtaccacacg ggacccccct
     2221 aagccgatcg tcccaggcag ccatgacagc ctcagctcca tcgggctcag tagcccagtc
     2281 ctctgccctg ccaccagcgc cacctatagg gtccccagcg ggggccccag gcaggccggc
     2341 gggggcaacg tgggagccag tgtaagccac ctggcgtgct ccctgggcaa ggccatccac
     2401 aactcgatag aaggagtcca ggtccaactg gggcgcgtct gctggaatgg ccccgtccac
     2461 atactccact atggcctctg aggcctcggc gcgccggcac atatcgtcag ggatggcgtt
     2521 gagctggcgg gggatgtagc ggaatgctat ctgccacctc aacctcctgg caagtgtcct
     2581 gactccctcc acagtcaggt atagggaagg cttccgggcc ttccggtaga tgcccaggag
     2641 gagcctcacc atcatctggg aatcccccaa caccctaatc ggggcatcca gatatggctc
     2701 ccccgcctgc taccgcgccg ccaaatcctc caacgccatc ctgaccgctg tggactccgc
     2761 atcgttgttg gtgaggcccc tccccaaagg gaccccacgc cgcaccacct cctgaccctt
     2821 gctgtcagca atcacgtatc c
//
LOCUS       DATGWW010000417         2057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_151516, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000417 DATGWW010000000
VERSION     DATGWW010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151516"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..685
                     /locus_tag="VK150_06050"
     CDS             137..685
                     /locus_tag="VK150_06050"
                     /inference="COORDINATES: protein motif:HMM:NF024911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP30905.1"
                     /translation="MKIAFIGTHGVGKTTLCYELAAALKRDGVHVDIVKEVARLSPLP
                     INQKTSLEAQTWIFMTQMAEEIRSGSQHDVVVCDRSVLDNYAYMMLAFGRQLPIERFM
                     HHWMKSYDLLFKVPFSGQLAADGVRDTDTFFAEAVDQLVDKLLQERSIPHERLASGAR
                     PTWIERVKEVVLSHPKGQKRLI"
     gene            792..>2057
                     /locus_tag="VK150_06055"
     CDS             792..>2057
                     /locus_tag="VK150_06055"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HLP30906.1"
                     /translation="MFAATGVAGLVFLGSLLVALGGLRSGQKTFQSYAEDSAPELLMY
                     TQLYANGLQTGQAIRNIVLDPSNPKAFQNYESAQKEFSATLQTGLALTADTPQRQQAL
                     REIRQQWEQLIRMQEPIRDRTLDQAAAVALLNKEATPTWRSIKDRLLTLIKQQEQIMG
                     GIKADSMKTQDRALRLALGVGLLAGALGTALLFLAIRSLQRRLGDLDAAMAGLASGKG
                     DLTRRLQVTGADEICAIAEKANTLTEFYQRFFQRLGLHSQGVASGSTQLSATADSLSG
                     TARQLDTLTQTTRANAEGMSKAMSALASSLDEVSALAEASRGHSMASDQAIQHGITTG
                     QDTARAMDDISHASAEMIKAVSVIQDIARQTNLLSLNAAIEAAKAGQLGKGFAVVADE
                     VRKLAERSAHATNQINQLIIATDEALGKGT"
BASE COUNT          387 a          730 c          646 g          294 t
ORIGIN      
        1 actggagcca gatcgagacc tacctctccg aacggaccga ggccaccttc acccatggcg
       61 tctgccccga ctgcgcgcgg cgcttccggg aggacatgca ggcgcgccgc gcccggaagg
      121 acgaggggga agattcgtga agattgcctt catcggcaca cacggggtcg ggaagaccac
      181 cctctgctac gaactggctg ccgccctcaa gcgggacggc gttcacgtgg acatcgtgaa
      241 ggaagtggcg cggctgtcgc ccctgcccat caaccagaag acctcgctgg aggcccagac
      301 ctggatcttc atgacccaga tggccgagga gatccgctcc ggcagtcagc acgacgtggt
      361 ggtctgcgac cgcagcgtcc tcgacaacta cgcctacatg atgctggcct tcggccgcca
      421 gctgcccatc gagcggttca tgcaccactg gatgaagagc tacgacctgc tcttcaaggt
      481 gcccttcagc ggccagctcg cggcggacgg cgtgcgggac acggacacct tcttcgccga
      541 ggcggtcgac cagctggtgg acaagctgct gcaggagcgg agcatccccc atgaacgcct
      601 cgcctccggc gcccgcccca cctggatcga gcgggtcaag gaagtggtgc tgagccatcc
      661 caaggggcag aagcgcctca tctgaggcga ttattaaaga gtccgaggtg gtcttccgat
      721 ccaccgcgtc tggggatgat ctcatccagg gaggacgtgt gctccgagca ggccgtacca
      781 tcggaaccag gttgttcgcc gccacgggag tcgcggggct ggtcttcctc ggctccctcc
      841 tcgtggccct gggcggactt cggtctggcc agaagacgtt ccaatcctac gccgaggact
      901 ccgccccgga actgctgatg tacacccagc tgtatgccaa cgggctccag accgggcagg
      961 ccatccgcaa catcgtcctg gatccgtcga acccgaaggc cttccagaac tatgaatccg
     1021 cccagaagga gttcagcgcc accttgcaga cgggcctcgc cctgacggcg gatactccgc
     1081 aacgccagca ggccctgcgg gagatccgcc agcaatggga acagctgatc cgcatgcagg
     1141 aacccatccg ggatcgcacc ctcgatcagg ccgccgccgt cgccctgttg aacaaggagg
     1201 cgacgcccac ctggagaagc atcaaggacc ggctcctgac cttgatcaag cagcaagagc
     1261 agatcatggg cggcatcaag gccgattcca tgaaaaccca ggaccgggcg ctgcgcctgg
     1321 ccctcggggt gggcctgctc gcgggcgccc ttggcaccgc gctgctcttc ctcgccatcc
     1381 ggagcctgca acggcggctg ggggacctcg acgccgccat ggcgggcctg gccagcggga
     1441 agggcgacct gacccggcgg ctccaggtca ccggcgccga cgagatctgc gccatcgccg
     1501 agaaagccaa cacgctgacc gagttctacc agcgcttctt ccagcggctg ggcctgcact
     1561 cccagggagt cgccagcggc tccacccagc tctcggccac cgccgactcc ctctcgggca
     1621 ccgcgcggca gctggacacc ctgacccaga ccacccgggc caacgccgaa ggcatgtcca
     1681 aggccatgag cgccctggcg tcctccctgg atgaggtgtc cgccctggcc gaggcctccc
     1741 gcggacactc catggcctcc gaccaggcca tccagcacgg aatcaccacc gggcaggaca
     1801 cggcgcgggc gatggacgac atcagccacg cctccgccga gatgatcaag gccgtgtcgg
     1861 tcatccagga catcgcccgg cagacgaacc tgctctccct gaacgcggcc atcgaggccg
     1921 ccaaggccgg gcagctgggc aaggggttcg ccgtggtggc cgatgaggtg cggaaactcg
     1981 ccgaacggtc cgcccatgcc accaaccaga tcaaccagct gatcatcgcc acggacgagg
     2041 ccctcggcaa ggggacg
//
LOCUS       DATGWW010000418         1745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_344974, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000418 DATGWW010000000
VERSION     DATGWW010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_344974"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VK150_06060"
     CDS             <1..190
                     /locus_tag="VK150_06060"
                     /inference="COORDINATES: protein motif:HMM:NF028004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HLP30907.1"
                     /translation="RHRVDVMVKDSKAYPKSGGWWFGRFMGDDWAKDVLSPDQRTSCF
                     HCHQQPRARDYVISEFRK"
     gene            291..>1745
                     /locus_tag="VK150_06065"
     CDS             291..>1745
                     /locus_tag="VK150_06065"
                     /inference="COORDINATES: protein motif:HMM:TIGR00691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0015968 - stringent response [Evidence
                     IEA];
                     GO_process: GO:0015969 - guanosine tetraphosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RelA/SpoT family protein"
                     /protein_id="HLP30908.1"
                     /translation="MAVPGKAPEPVLREGEGSACGTEACLTLEGSFERVKAAFLRHHP
                     NGDIALLYRAFVVGRDMHATQVRKSGEPYFFHPLSVAQSLADWRLDAVSVACGMLHDV
                     VEDTLMTQGQVKAQFGEEIAEIVDGLTKMSKLAFTDKHLLNAENVRKLLVAMGKDVRV
                     LLVKLADRLHNMKTLGVMEEEKRRRISRETLELYAPLANRLGMGLVRLELEDLAFRQL
                     EPEQYTELKNAVERKRAKLTATIHEIHGSIEAILRQQGISAQVYGRIKHLYGIWKKMG
                     AQAKGFDDIHDWLAYRIICPDRASCYTALGLVHGLYKPVPGKFKDYISLPKENGYQSI
                     HTTVLMNSGDLFEVQIRTEEMHLHAEAGIASHWTYKDGRIANRLEINQVSFLRRMVEL
                     HQDAQDSRDLVANLRGELTFNRIQVFTPKGDLRSLVENSTPVDFAYAIHTEVGHRCVG
                     AKVNGRIVPLKHTLQNGDRVEILTRPDHKPSRDWL"
BASE COUNT          330 a          608 c          559 g          248 t
ORIGIN      
        1 gcggcaccgc gtggacgtga tggtgaaaga cagcaaggcc taccccaagt ccggcggctg
       61 gtggttcggc cgcttcatgg gcgacgactg ggccaaggat gtcctctccc ccgaccagcg
      121 gacctcctgc ttccactgcc atcaacaacc cagggcccgg gactacgtga tcagcgaatt
      181 ccggaagtag cgcgcgcccc aggccgcccc gcgggtcatc cagggcggta tcgtgtgtga
      241 cgccctcact tccgtctggc gtctagccag cgcctgcgcg acactcaacc atggccgtac
      301 ctgggaaagc cccggagccc gtcctccgcg agggggaagg ctcggcctgc ggcacggagg
      361 cctgcctgac cctggaggga tccttcgagc gggtgaaggc cgccttcctt cggcaccatc
      421 ccaacggcga catcgccctg ctctaccggg ccttcgtggt gggccgggac atgcacgcca
      481 cccaggtgcg gaagagcggc gagccctact tcttccatcc cctgtcggtg gcccagagcc
      541 tggcggactg gcggctggac gcggtgagcg tggcctgcgg catgctgcac gacgtggtgg
      601 aagacactct gatgacccag ggccaggtga aggcccagtt cggggaggag atcgccgaga
      661 tcgtggacgg gctcaccaag atgagcaagc tggccttcac ggacaagcac ctgctcaacg
      721 ccgagaatgt ccgcaagctg ctggtggcca tgggcaagga cgtgcgggtg ctgctggtga
      781 agctggcgga ccggctgcac aacatgaaga ccctgggcgt gatggaagag gagaagcgcc
      841 gccgcatctc tcgggagacg ctggagctct acgcccccct ggccaatcgc ctgggcatgg
      901 gcctggtacg cctcgagctg gaggacctgg ccttccggca gctggagccc gagcagtaca
      961 ccgagctgaa gaacgccgtg gagcgcaagc gcgccaagct cacggccacc atccacgaga
     1021 tccacggctc catcgaggcc atcctgcgcc agcagggcat ctcggcccag gtctacggcc
     1081 gcatcaagca cctctacggc atctggaaga agatgggcgc gcaggccaag ggcttcgacg
     1141 acatccacga ctggctggcc taccgcatca tctgccccga ccgcgccagc tgctacacgg
     1201 ccctgggcct ggtgcacggc ctctacaagc ccgtgcccgg caagttcaag gactacatca
     1261 gcctgcccaa ggagaacggc taccagagca tccacaccac ggtgctcatg aattccggcg
     1321 acctcttcga ggtgcagatc cgcaccgagg agatgcacct ccacgccgag gccggcatcg
     1381 ccagccactg gacctacaag gacggccgca tcgccaaccg cctggagatc aaccaggtct
     1441 ccttcctgcg ccgcatggtg gagctgcacc aggatgccca ggacagccgc gacctcgtgg
     1501 ccaacctgcg cggcgagctg accttcaacc gcatccaggt cttcacgccc aagggcgacc
     1561 tgcggagcct ggtggagaac agcacgccgg tggatttcgc ctacgccatc cacaccgagg
     1621 tgggccaccg ctgcgtgggc gccaaggtga acgggcgcat cgtgcccctg aagcacacgc
     1681 tgcagaacgg cgaccgggtg gagatcctca cccgcccaga ccacaagccc agccgcgact
     1741 ggctc
//
LOCUS       DATGWW010000419         2260 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_440772, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000419 DATGWW010000000
VERSION     DATGWW010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2260
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440772"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..493
                     /locus_tag="VK150_06070"
     CDS             <1..493
                     /locus_tag="VK150_06070"
                     /inference="COORDINATES: protein motif:HMM:NF014871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HLP30909.1"
                     /translation="PTSVRQFYALAPYESQVARIRITGDQLKRYLEHAARHYLQSWEP
                     ELYNREVPFYNFDMVDGVAYALDLGQPVGSRVRNLSFQGRPVKPDQSFTLALSTYRLR
                     GGGGYMAAIGFKGEPELVTRASQRNLLLEHVLGRSALNPVATGAWRTIPYLDRERVFS
                     LAR"
     gene            complement(496..1389)
                     /locus_tag="VK150_06075"
     CDS             complement(496..1389)
                     /locus_tag="VK150_06075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30910.1"
                     /translation="MLPIRVSALSALLGLSTLALTAQGWDAARQARSWAKQDKDDSFT
                     FFDPATRTLHTWSRDGGILASISTAKIDEPLERWAIDPRNNAWIAHGTDLTQLDRNGR
                     NVTSNRLPAEVGDICWDPKGLVLSYRAPEPYLEKRDFKGSVLWTFGAKPAKGDGPAPQ
                     NRRPIVMDDSGKILMADGHSLNLSILDGETGRKLSETNFRLPGGQPAPLLEGSALERD
                     ALAIWPGKGVVFAAVKASQIPAALRETFQGMVLARLDLMQSRLEFLPTGLDEGHVLIG
                     VLDADAVFVNPRGGLMLVKVK"
     gene            complement(1478..>2260)
                     /locus_tag="VK150_06080"
     CDS             complement(1478..>2260)
                     /locus_tag="VK150_06080"
                     /inference="COORDINATES: protein motif:HMM:NF014799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HLP30911.1"
                     /translation="IAEQHAVTFAAGLATQGMRPVAAIYSTFLQRGFDQVAHDVCIQD
                     LPVTFALDRAGIVGADGPTHHGLYDLAYLRCLPNIVLMAPKDENELRRMLMTALYCGH
                     PAALRYPRGNGLGVVMEDPVTALPVGKGELLREGDGLLLCALGSMVDPALKLADRLAG
                     EGLSCAVINARFVKPLDAPLILEWASRCRGVVTLEEGCAPGGFSGAVAESLADGGLLR
                     PLLRCAVPDHLVHHGDPKRLLEEEGLSLPLLETRVRDFMRNM"
BASE COUNT          369 a          734 c          803 g          354 t
ORIGIN      
        1 gcccaccagc gtccgccagt tctacgccct ggccccctat gaaagccagg tcgcgcgcat
       61 ccgcatcacg ggcgaccagc tgaagcgcta cctcgagcac gccgcgcgcc actatctcca
      121 gagctgggag ccggagctgt acaaccgaga ggtgcctttc tacaacttcg acatggtgga
      181 tggggtggcc tacgccctgg acctgggcca gcccgtgggc agccgcgtgc ggaacctcag
      241 cttccagggc cgcccggtga agcccgacca gtccttcacc ctggcgctga gcacctaccg
      301 cttgaggggg ggcggcggct acatggccgc catcgggttc aagggcgagc cggagctggt
      361 cacccgggcc tcgcagcgca acctcctgct tgagcatgtg ctgggccggt ccgccctgaa
      421 ccccgtggcc accggcgcct ggcgcaccat cccctacctg gatcgggagc gtgtgttcag
      481 cctggcccgc taggcctact tcaccttcac cagcatcagt ccgcccctgg gattgacaaa
      541 cacagcgtcg gcatcgagca cgccgatcag gacgtggcct tcgtccagac cggtggggag
      601 gaattccagc cgtgactgca tcaggtccag ccgggccagc accatgccct ggaaggtttc
      661 gcggagggcg gcggggatct ggctggcctt caccgccgcg aagaccacgc ccttgcccgg
      721 ccagatcgcc agggcatccc gctcaagggc cgagccctca aggagcgggg cgggctgccc
      781 gccgggaagg cggaagttgg tttccgacag cttgcggccc gtctctccgt cgaggatcga
      841 gaggttcagg gaatggccgt cggccatcag gatcttgccg gagtcgtcca tgacgatggg
      901 ccgccggttc tggggcgcgg ggccatcgcc cttggcgggc ttggcgccga aggtccagag
      961 caccgagccc ttgaagtcgc gcttctccag gtagggctcc ggggcccggt aggagagaac
     1021 gaggcccttg ggatcccagc agatgtcgcc cacctcggcc ggcagccggt tgctggtcac
     1081 gttccggccg ttgcgatcca gctgggtgag gtcggtgccg tgggcgatcc aggcattgtt
     1141 gcggggatcg atggcccagc gttcgagcgg ttcgtcgatt ttcgcggtgg agatgctggc
     1201 gaggatgcca ccgtcgcggg accaggtgtg aagcgttcgc gtggcggggt cgaagaaggt
     1261 gaaggagtcg tccttgtcct gcttggccca gctccgggcc tggcgggccg catcccagcc
     1321 ctgggcggtc agggccaggg tcgacagccc gagcaaggcg ctcagagcgg atacgcggat
     1381 tgggagcatc ctcacggaat cctcggggaa aggtccacag gcgtttatgg gttgggacca
     1441 accataggaa tttccaggag tttctgcaag gttttactta catgttgcgc atgaaatccc
     1501 ggacgcgcgt ttccagcagc ggcaggctga gcccctcttc ttcaagcaac cgcttgggat
     1561 ccccatggtg gaccaaatgg tcaggaacgg cgcagcgcag gagcggccgg agcaggccac
     1621 cgtccgccag ggactcggcc actgccccgc tgaacccacc cggggcgcag ccctcctcaa
     1681 gggtgaccac gccccggcaa cggctggccc actcaaggat caaaggcgcg tcaagcggtt
     1741 tgacgaagcg ggcgttgatg acggcacagg agaggccttc gcccgcgagc cgatccgcca
     1801 gcttcagggc cggatcgacc atggagccca gggcgcagag caggaggccg tcgccctcgc
     1861 ggaggagctc gcccttgccc acgggcaggg cggtgacggg atcctccatg accaccccga
     1921 ggccgttccc gcgcggatag cgcagggccg cggggtggcc gcagtagagg gcggtcatga
     1981 gcatccggcg cagttcgttc tcatccttcg gggccatgag cacgatgttg ggcaggcagc
     2041 ggaggtaggc caggtcgtag aggccgtggt gcgtggggcc gtcggcgccc acgatgccgg
     2101 cgcgatcgag ggcgaaggtc acgggcagat cctggatgca gacgtcgtgg gccacctggt
     2161 cgaagccccg ctgcaggaag gtgctgtaga tcgccgccac ggggcgcatg ccctgggtgg
     2221 cgagcccggc ggcgaaggtg accgcgtgct gctcggcgat
//
LOCUS       DATGWW010000420         2883 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_440778, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000420 DATGWW010000000
VERSION     DATGWW010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440778"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1893
                     /locus_tag="VK150_06085"
     CDS             <1..1893
                     /locus_tag="VK150_06085"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HLP30912.1"
                     /translation="PLLVVNPYALGLLTLLAIYGILLIGLDVTVGYLGQVNLAHVAFL
                     GLGAYTAGLVVTKLGLGMAPALLAAMAVGLLLGGLLALPALRLEGPQFALATLSFAAL
                     STTALNELEALTGGAQGLSLTRPPVFGHALTPPLFYWLCMALLAVVWMLMRNLLASQW
                     GRAFEALRDSPIATDAMGVGTYRHKVAAFALGSGLGGLAGGLYAFNFQYLQPQSFVYD
                     LMIILLLGVVLGGRKSLWGAFVGASVIVLLPNLLSNRLLFQVFSGLGCALALAAGLRG
                     MVTKTTRPFQALAPVVAMGLLVVGGFFVENTEDWRKAIFALMLFSVVVGLPEGLMGFL
                     SLFLAKLFRVPHAPLPEPSDIEAILPPRAADGAPLLVLEDLKRHFGGVRAVDGLSMTI
                     KSGSIHGLIGPNGSGKSTVVNVISGLYTPSAGRVLLRGTPLPSGSLFRVSRSGVARTF
                     QNLQLFGELTALENVMVALRGVYRSPLPLVLLGLARREERQAQADALCLLGRVGLQDQ
                     ALTRAKDLTYGAQRFLEVARALARKPDLLILDEPAAGLAHPDVVQLIEIIKRVHRRGI
                     SILLIEHHMDVVSELCDVVTVLDGGKVIAEGPPDEVKRHPKVVEAYLGQPPQTDTPGE
                     PSPQPA"
     gene            1903..2619
                     /locus_tag="VK150_06090"
     CDS             1903..2619
                     /locus_tag="VK150_06090"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLP30913.1"
                     /translation="MLIVEDLHAGYGASEVLTGASLTVKQGTLVALIGANGAGKTTTM
                     RAISGGLKPARGRVLLDGQEVQGLDASRIARLGLAHAPEGRKVFGPLSVEDNLLLGAY
                     SRLPRFFGYRASSRADLDRVYDLFPRLRDRTKQAAGTLSGGEQQMLAIGRALMARPKV
                     MLLDEPSMGLAPVIVQEVFRTIRRLKEEGITLLLVEQFAKSALEVADYAYVMERGRIA
                     VEGTPAELGRDERVLAAYLG"
     gene            2663..2737
                     /locus_tag="VK150_06095"
     tRNA            2663..2737
                     /locus_tag="VK150_06095"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2695..2697,aa:Gly,seq:ccc)
BASE COUNT          387 a         1062 c          937 g          497 t
ORIGIN      
        1 cccctgctgg tggtgaaccc ctacgccctg ggcctgctca ccctgctggc catctacggc
       61 atcctcctca tcgggctgga cgtcaccgtg ggctacctgg gccaggtgaa cctcgcccac
      121 gtggccttcc tgggcctggg cgcctacacc gccggactcg tcgtcaccaa gctgggcctc
      181 ggcatggcgc cggcgctgct ggcggccatg gccgtgggcc tgctgctggg cggcctgctg
      241 gccctgccgg cgttgaggct cgagggtcct cagttcgcgc tggccacgct cagtttcgcg
      301 gccctcagca ccacggcgct caacgagctg gaagccctca ccggcggcgc ccagggcctg
      361 agcctgacgc gccctcctgt cttcggccac gccctcacgc ctcctctctt ctactggctc
      421 tgcatggcgc tgctggccgt ggtgtggatg ctcatgcgca acctgctcgc gtcgcagtgg
      481 ggccgggcct tcgaggccct gcgcgacagc cccatcgcca ccgacgcgat gggggttggc
      541 acctaccggc acaaggtcgc ggccttcgcg ctgggctcgg gcctgggcgg cctggcgggc
      601 gggctctacg ccttcaactt ccagtacctc caaccccaga gtttcgtcta cgacctgatg
      661 atcatcctgc tgctgggcgt ggtcctgggc ggccgcaaga gcctgtgggg cgccttcgtg
      721 ggcgcctcgg tgatcgtcct cctgcccaac ctcctctcca accggctgct cttccaggta
      781 ttttcgggcc tcggctgcgc cctggccctg gcggcgggcc tgcggggcat ggtgacgaaa
      841 accacccgcc ccttccaggc cctggccccc gtggtggcca tggggctgct ggtggtgggc
      901 ggcttcttcg tggagaacac cgaagattgg cgcaaggcca tcttcgccct gatgctcttt
      961 tctgtcgtgg tgggcctgcc cgagggcctc atgggctttc tctccctctt cctggccaag
     1021 ctgttccggg ttccccacgc ccccctgccc gagccttcgg acatcgaggc catcctgcct
     1081 ccccgcgccg ccgacggcgc gcccctgctc gtgctggaag acctcaagcg ccacttcggc
     1141 ggcgttcggg ccgtggacgg gctctccatg accatcaagt ccggcagcat ccacggcctc
     1201 atcgggccga acggctcggg caagagcacg gtggtgaacg tcatctcggg gctctacacg
     1261 ccgagcgcag gccgcgtgct gttgcgggga acgccgctgc cctcgggcag cctcttccgg
     1321 gtgtcgcggt ccggcgtggc gcggaccttc cagaacctcc agctcttcgg ggaactcacc
     1381 gccctcgaaa acgtcatggt ggccctgcgc ggcgtgtacc gcagccccct gcccctggtg
     1441 ctgctggggc tggcgcggcg cgaggaacgc caggcccagg cggacgccct ctgcctgttg
     1501 ggcagggtgg gactgcagga ccaggccctc acccgggcca aggatctgac ctacggcgcc
     1561 cagcgcttcc tcgaggtcgc ccgcgccctc gcccgcaagc ccgacctgct catcctggat
     1621 gaacccgcgg cgggcctggc ccacccggac gtggtccagc tcatcgaaat catcaagcgc
     1681 gtccacaggc gcggcatcag catcctcctc atcgagcacc acatggatgt ggtgagcgaa
     1741 ctctgcgacg tggtgaccgt gctcgacggc gggaaggtca ttgcagaagg tccaccggac
     1801 gaggtgaagc gccatcccaa ggtggtggaa gcctatctgg gccagccccc ccaaaccgac
     1861 acccccggcg aaccttcgcc gcagccggcc taggaggcac ccatgctgat cgtggaagat
     1921 ctccatgcgg gctacggcgc cagcgaagtg ctgacgggcg cctccctcac cgtgaagcag
     1981 ggcacgctgg tggccctcat cggggccaac ggcgccggca agaccaccac catgcgcgcc
     2041 atctccggcg gcctcaagcc ggcccggggc cgcgtgctgc tcgacggcca ggaggtgcag
     2101 ggcctggatg cctcccgcat cgcccgcctg ggcctcgccc atgcgcccga gggccggaag
     2161 gtgtttggcc cgctttccgt ggaggacaac ctgctcctgg gcgcctacag ccgcctgccg
     2221 cggttcttcg gctaccgggc cagctcccgc gccgacctgg accgcgtcta cgacctgttc
     2281 ccccggctgc gcgaccgcac gaagcaggcc gcgggcaccc tctcaggcgg cgagcagcag
     2341 atgctcgcca tcggccgtgc gctcatggcc cggcccaagg tcatgctgct ggacgagcct
     2401 tccatgggcc tggccccggt catcgtgcag gaggtcttcc gcaccatccg ccgcctcaag
     2461 gaggagggca tcaccctgct cctcgtcgaa cagttcgcca agagcgccct cgaggtcgcc
     2521 gactacgcct acgtgatgga gcggggccgc atcgccgtcg aaggcactcc ggccgagctg
     2581 ggccgcgacg agcgcgtgct cgccgcctac ctgggctgag acttggccca ccgggccgct
     2641 tgcgctagca tggagccctg ccgcgggcgt agttcagtgg tagaacgcaa gcttcccaag
     2701 cttgatgtcg tgggttcaat ccccatcgcc cgctccaaag caaatggccc gcccttggcg
     2761 ggtcgtttgc tttggagaga acctggcggg gattgaaatc gctgaatcgc tggcaggctg
     2821 actcaggcct ccggcgttat ttctttggtt cctgggcctt gatcaagcct tcctcgggct
     2881 ggg
//
LOCUS       DATGWW010000421         1625 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_440876, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000421 DATGWW010000000
VERSION     DATGWW010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440876"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..775
                     /locus_tag="VK150_06100"
     CDS             32..775
                     /locus_tag="VK150_06100"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body protein"
                     /protein_id="HLP30914.1"
                     /translation="MDPGYYVAAGSLKARAFQLDVVANNLANAATVGYKPDQPFFAVF
                     NKAAGSARKLPLSGALNDGVVFGETGVVTAQGNLRATGRSLDIAIEGNAFLMVRTPAG
                     DRVTRDGRLQMGTNGQLQAMDGSPVLGKNGQPITLDSKNGNVSITADGTVSQKEQVLG
                     QLDLKAFEKAGALKRTGALRFDPAGAAEAPVKGTVTQGHLEQSAVDTASTMVEMIRLN
                     RLFELSMKVASTLTNDLDSRSINDVAISR"
     gene            811..1599
                     /gene="flgG"
                     /locus_tag="VK150_06105"
     CDS             811..1599
                     /gene="flgG"
                     /locus_tag="VK150_06105"
                     /inference="COORDINATES: protein motif:HMM:TIGR02488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009426 - bacterial-type flagellum basal
                     body, distal rod [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HLP30915.1"
                     /translation="MMRAMWSAAAGMNVQQYNMDTISNNLANVNTTGFKKARAEFQDL
                     LYQTVNLAGTSSSTSTTIPAGIQLGHGAKLQSLMRQFSTGNLRQTANRFDMAIEGDGF
                     FRVTMPDGTLAYTRDGGFTTDQNGALVNSAGYLLDPQITIPQDTLSVTIAGDGTVSVT
                     QTGQSQPQQVGQITLSHFINPAGLNQLGRNLLQPTLASGEAIDGIPGADGLGTLNQGF
                     LEVSNVDVAEEMVNMIIGQRAYEANSKTIKTVDDMLSLLNNLKR"
BASE COUNT          317 a          583 c          496 g          229 t
ORIGIN      
        1 tccctgccgc tggctgggcg agaggtgcct aatggatcct ggatactatg tcgccgcagg
       61 cagcttgaag gcgcgggcct tccagctgga tgtggtggcc aacaacctgg cgaacgcggc
      121 cacggtgggc tacaagcccg accagccgtt cttcgcggtg ttcaacaagg ccgcagggag
      181 cgcccgcaag ctgcccctga gcggggccct gaacgatggc gtggtcttcg gcgagaccgg
      241 ggtggtcacg gcccagggga acctccgggc cacgggccgg tcgctcgaca tcgccatcga
      301 aggcaacgcc ttcctcatgg tgcgcacccc ggccggtgat cgggtcaccc gggatggccg
      361 cctccagatg gggacgaacg gccagctcca ggccatggac ggcagcccag tgctgggcaa
      421 aaacggccag cccatcaccc tggattcaaa gaacgggaat gtctccatca cggccgacgg
      481 caccgtctcc cagaaggagc aggtgctggg tcagctggac ttgaaggcct tcgagaaggc
      541 cggcgccctg aagcgcaccg gcgccctccg cttcgatccc gccggcgccg cggaggcccc
      601 cgtcaagggc acggtcaccc agggccacct ggagcagagc gccgtggaca ccgcctcgac
      661 catggtcgag atgatccgcc tcaaccgcct cttcgagctg agcatgaagg tggcctcgac
      721 cctcaccaac gatctggatt cgcgctccat caacgatgtc gcgatcagcc gctagtcccc
      781 cattccccaa gaaatgacac ggaggttccc atgatgcgtg cgatgtggtc ggccgcggcg
      841 ggcatgaatg tccagcagta caacatggac accatttcca acaacctggc gaacgtgaac
      901 accacgggct tcaagaaggc ccgggcggag ttccaggatc tgctctacca gaccgtcaac
      961 ctggcgggca ccagctccag caccagcacc acgatcccgg cgggcatcca gctgggccac
     1021 ggcgccaagc tccagagcct catgcggcag ttcagcaccg gcaacctgcg ccagaccgcg
     1081 aaccgcttcg acatggccat cgagggcgac ggcttcttcc gcgtgaccat gccggacggc
     1141 accctggcct acacccgcga cgggggcttc accaccgacc agaacggcgc cctggtgaac
     1201 tcggcgggct acctgttgga tccccagatc accatccccc aggacaccct cagtgtgacc
     1261 atcgccggag acggcaccgt gagcgtcacg cagacgggcc agagccagcc ccagcaggtg
     1321 ggccagatca ccctgtccca cttcatcaac cccgcgggcc tcaaccagct gggccgcaac
     1381 ctcctgcagc ccaccctggc cagcggcgag gccatcgacg gcattcccgg cgccgacggc
     1441 ttgggcaccc tcaaccaggg cttcctcgag gtctccaacg tggacgtggc cgaggaaatg
     1501 gtgaacatga tcatcggtca gcgggcctac gaggcgaact cgaagaccat caagaccgtg
     1561 gacgacatgc tcagcctcct gaacaacctc aagcggtagc cccatgcgcc ccgccgccct
     1621 gcttc
//
LOCUS       DATGWW010000422         2230 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_112671, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000422 DATGWW010000000
VERSION     DATGWW010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112671"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..807
                     /locus_tag="VK150_06110"
     CDS             <1..807
                     /locus_tag="VK150_06110"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HLP30916.1"
                     /translation="LPLMRTVPFLGVPGNHDVPFRKVPDAAAYFAYWSLPLNGPALKR
                     GDLNAAPVVPGVHDAVVAASGAAYPRMASFSFDYGPAHWTVLDSNAYVDWESPEMKAW
                     LEADLKAAKGAAWRIVALHHPLFQSSRSHMDDQWMRPISPILEKYGVDLVLAGHVHNY
                     QRSAPLRFKTTQIGRRGKPVAGEFTVDEAFDGKTRTRAQGVIHVVTGAGGAELYDPWQ
                     TDIRASWQPWTRTFISDRHSFTVLDVEAKKLRMRQLDAEGRELDAMTLTK"
     gene            complement(853..1233)
                     /locus_tag="VK150_06115"
     CDS             complement(853..1233)
                     /locus_tag="VK150_06115"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HLP30917.1"
                     /translation="MLAILVSCQPGPQSTPTIPAADAKAVLGFLAAYGRRDLDGMMRY
                     LEEDAVFRGTETTLSKAQIREFFQASFQKHPNLQVEVGPLKDVQGTLHASVKVQTNAI
                     WTDTWIFELRNHRIRAYWLASGIR"
     gene            complement(1298..1795)
                     /locus_tag="VK150_06120"
     CDS             complement(1298..1795)
                     /locus_tag="VK150_06120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30918.1"
                     /translation="MRLSRLFLVPVFACLTLAAQEPTLAGTWNQTKADDIAAAINATV
                     ADMNFIKRPIARGRLTKLNPAYKKVAITLTDKEVLVKLDEREPIHMPADGKSAPWTRE
                     DGDKFQVAAQVTKGQLVQTFKNEDGERTNVFQMSPDGKSLKLTATVKSPQLPKPLTYS
                     ISFGR"
     gene            complement(1887..>2230)
                     /locus_tag="VK150_06125"
     CDS             complement(1887..>2230)
                     /locus_tag="VK150_06125"
                     /inference="COORDINATES: protein motif:HMM:NF012412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30919.1"
                     /translation="NVDEAVKGADVLYTDVWASMGEEDQIPERVKLLTPFKVTMEMIQ
                     KTGNPDVKFLHCLPAFHDFETKLAKEQKALGHDIREVTDEVFRSRHSVVFDEAENRMH
                     TIKAVMVATIG"
BASE COUNT          341 a          699 c          784 g          406 t
ORIGIN      
        1 ctgcctctga tgcgcacggt tccgttcctg ggcgttcccg gcaaccacga tgtgcccttc
       61 cggaaggtgc ctgacgccgc ggcctatttc gcgtactggt cgctgcccct gaacggcccg
      121 gcgctgaagc ggggcgacct caacgccgcg ccagtggtgc ccggcgtgca tgacgcggtg
      181 gtggcggcct ccggcgcggc ctatccgcgc atggccagct tcagcttcga ttacggcccg
      241 gcgcactgga cggtgctgga ttccaacgcc tacgtggatt gggaaagccc ggagatgaag
      301 gcctggctgg aggccgacct gaaggccgcc aagggcgccg catggcgcat cgtcgccctc
      361 caccaccccc tgttccagag ctcccggagc cacatggacg accagtggat gcggcccatc
      421 agcccgatcc tggagaagta cggggtggat ctggtgctcg cgggtcacgt gcacaactac
      481 cagcgatcgg cgcccctgcg gttcaagacc acgcagatcg gccgccgggg caagcccgtg
      541 gccggtgagt tcaccgtgga tgaggccttc gacggcaaga cccgcacccg ggcccagggc
      601 gtcatccatg tggtgacggg cgccggcggc gccgagctct acgatccctg gcagaccgac
      661 atccgtgcca gctggcagcc ctggacccgg accttcatct ccgaccgcca ctccttcacg
      721 gtgctggatg tggaggcgaa gaagttgcgg atgcgtcagc tcgacgccga ggggcgggag
      781 ctggacgcca tgacgctgac gaagtagggc gcctcacgat tccgcgtgtt gatcatcgtc
      841 aggacggggc gcctagcgga tgccagaggc gagccagtag gcgcggatcc ggtgattccg
      901 cagttcgaag atccaggtgt cggtccagat ggcgttggtc tggactttga cgctggcgtg
      961 gagggttccc tgcacgtcct tcaggggacc gacttcaacc tggaggttcg gatgcttctg
     1021 gaaggaggcc tggaagaact cccggatctg ggccttggac agcgtcgtct cggtgccacg
     1081 gaagacggca tcctcctcca ggtaccgcat catgccgtcc aggtcccggc ggccgtaggc
     1141 ggcgaggaaa cccaggacag ccttggcgtc cgcggcaggg atggtcgggg tggactgggg
     1201 tccgggctgg cacgacacca ggatggcgag cacgggaagg gcggcgctcc gggctgcgac
     1261 accgcatcca tgacttgccc ggcccatgga gctggtccta ccgcccgaag ctgatggaat
     1321 aggtcagcgg cttgggcagc tgggggctct tcacggtggc cgtgagcttc agggacttgc
     1381 cgtccgggct catctggaac acgttggtgc gctcgccgtc ctcgttcttg aaggtctgga
     1441 ccagctggcc cttggtcacc tgcgcagcca cctggaactt gtcgccgtcc tcgcgggtcc
     1501 aaggagcgga tttgccgtcg gcgggcatgt ggatgggctc gcgctcgtcg agcttcacga
     1561 gcacttcctt gtcggtgagg gtgatggcca ccttcttgta ggcggggttc agcttggtga
     1621 ggcggccccg ggcgatgggg cgcttgatga agttcatgtc ggccaccgtg gcgttgatgg
     1681 cggcggcgat gtcatcggcc ttggtctggt tccaggtgcc cgccagcgtg ggctcctggg
     1741 cggccagggt gaggcatgcg aatacaggaa cgaggaacag ccgggacagg cgcatggggt
     1801 ctccgtggga ttgggtggtc ccaccatagc acccccgcac gcagaaatgg ccccgagcgg
     1861 ggccatttct gcgcaggcgg cgtcgcctac ccgatggtgg ccaccatcac ggccttgatg
     1921 gtgtgcatgc ggttttccgc ctcgtcgaag accacgctgt ggcgtgagcg gaacacctcg
     1981 tcggtgacct cgcggatgtc gtggccgagg gccttctgct ccttggccag cttggtctcg
     2041 aagtcgtgga aggcgggcag gcagtgcagg aacttcacgt cgggattgcc ggtcttctgg
     2101 atcatctcca tggtgacctt gaagggcgtg agcagcttca cgcgctcggg gatctggtcc
     2161 tcctcgccca tgctggccca cacatcggtg tagagcacgt cggcgccctt caccgcctca
     2221 tccacgttgt
//
LOCUS       DATGWW010000423         2461 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_257393, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000423 DATGWW010000000
VERSION     DATGWW010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257393"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..407
                     /locus_tag="VK150_06130"
     CDS             <1..407
                     /locus_tag="VK150_06130"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HLP30920.1"
                     /translation="SLAAVAHAAQALMPEGGSIVTLSYLGSERVVPGYNVMGVAKASL
                     EASVRYLAADLGPQGIRVNAISAGPIKTLASSGIPGIGSKLKHHRAHTPLQRDTDQLE
                     VGDAGVFFLSDMGRGVTGQVLYVDGGFSIMAG"
     gene            complement(461..934)
                     /locus_tag="VK150_06135"
     CDS             complement(461..934)
                     /locus_tag="VK150_06135"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HLP30921.1"
                     /translation="MSPLLGHPLPDFSLQDDQGTVVTPKDLKGRWTVLYAYPKDSTPG
                     CTTEACDFRDNLARVQAHGAQVYGISRDSQKSHLNFIAKQNLPFRLLSDPECALLKPL
                     GAFGRKMMYGKEVEGIIRSTFLVDPKGIIRHVWPKVSVKGHVADVIETLAGMQKR"
     gene            1043..2296
                     /locus_tag="VK150_06140"
     CDS             1043..2296
                     /locus_tag="VK150_06140"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: protein motif:HMM:NF015284.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="HLP30922.1"
                     /translation="MNLTEYLSAEWRPALGCTEPAAVAYAACLAAAQGRGEPRMARLV
                     LDARTYKNCHAVGLPNSDHKTGILWALALGAVLPDPTPGLQIFGSVTPEALTQAARLL
                     DRGAIHVEVDPSRTELYLDCTVACAEGVGRAVLEQEHTRLVRLEADGVPVPVTSAAAG
                     CDGGDRVREQVGRMSLAELAALAASPTEADRARLREGVAWNLAMAEHCVGHLPPGFVP
                     GAEADPWLRIPRLVSAGVLGRMSGEPLTVMSLAGSGNKGITVSVALTLWGRHGGHSEA
                     RIEEALALACLLTTATTQKLGTLSAICGASNAAGIGIAAGLVYLGGGGPAQMDLAIHN
                     MVGNLAGLICDGAKIGCAMKAMTGVEAAFRSASLALAGFGIPETDGIVGATGEASLAN
                     LGRLAQRGMAGADTEILDIMQAKLG"
BASE COUNT          344 a          865 c          913 g          339 t
ORIGIN      
        1 actccctggc ggccgtggcc cacgcggccc aggccctcat gccggaaggc ggctccattg
       61 tgaccctgag ctacctgggc tccgagcggg tggtgcccgg ctacaacgtc atgggcgtgg
      121 ccaaggccag cctcgaagcc agcgtgcgct acctggccgc cgacctgggg ccccagggca
      181 tccgcgtgaa cgccatctcc gccggcccca tcaagaccct ggcctcgtcg ggcatccccg
      241 gcatcggctc gaagctcaag caccaccgcg cccacacccc gctccagagg gacaccgacc
      301 agctggaagt gggcgatgcc ggcgtgttct tcctcagcga catgggccgc ggcgtcaccg
      361 ggcaggtgtt gtacgtggac ggcggcttca gcatcatggc gggataggca ccgaccccag
      421 gaaaagctca ggcagagtca acaggcctgt tcatcctgcc tcagcgtttt tgcatgccgg
      481 ccagggtctc gatgacgtcg gccacatggc ccttcacgct gaccttgggc cagacgtggc
      541 ggatgatgcc cttgggatcc accaggaagg tcgagcggat gatcccctcg acctccttgc
      601 cgtacatcat cttgcggccg aaggcgccca ggggcttcag cagggcgcac tcgggatccg
      661 acagcaggcg gaaggggagg ttctgcttgg cgatgaagtt caggtggctc ttctggctgt
      721 cgcggctgat gccgtagacc tgcgcgccgt gggcctggac ccgggccagg ttgtcgcgga
      781 agtcgcaggc ctcggtggtg cagccggggg tgctgtcctt ggggtaggcg tagagcacgg
      841 tccagcgacc cttgaggtcc ttgggcgtga cgacggtgcc ctggtcgtcc tgcagggaga
      901 agtcagggag ggggtgtccg aggagggggc tcatggcgcc cagcgtagcg cagacggcgc
      961 cagctggggt ctcccgggcg agatcccggg tgtgaccggg ggcatggccc gatccggcca
     1021 gactgaggcg gcgaggttga ccatgaacct gaccgagtac ctgtctgcgg aatggcggcc
     1081 cgccctgggc tgcaccgaac ctgcggcggt ggcctacgcg gcctgcctgg ccgcggccca
     1141 gggccggggc gagccgcgca tggcgcggct ggtgctggac gcccgcacct acaagaactg
     1201 ccatgcggtg ggcctgccca acagcgacca caagaccggc atcctctggg ctctggccct
     1261 gggggccgtg ctcccggacc cgacccccgg cctgcagatc ttcggctcgg tcacgccgga
     1321 agccctcacc caggccgccc ggctgctgga ccggggcgcc atccacgtgg aggtggatcc
     1381 ctcgcgcacc gagctctacc tggactgcac cgtggcctgc gcggaaggcg tgggccgggc
     1441 cgtgctggag caggagcaca cgcgcctggt gcgcctggag gcggacggcg tgcccgtgcc
     1501 cgtgacgagc gcggccgccg gctgtgacgg gggcgaccgg gtgcgggagc aggtggggcg
     1561 gatgtccctc gccgagctgg cggcgctggc cgcctccccc accgaggccg accgggcgcg
     1621 gctgcgggag ggcgtggcct ggaacctggc catggccgag cactgcgtgg ggcacctgcc
     1681 gcccggcttc gtgccgggcg cggaggccga tccctggctg cgcatcccgc ggctcgtgag
     1741 cgccggggtg ctgggccgca tgtccggcga gcccctcacc gtgatgtcgc tggcgggatc
     1801 gggcaacaag ggcatcaccg tgtccgtggc gctcaccctc tggggccgcc acggggggca
     1861 cagcgaggcc cgcatcgagg aggccctggc gctggcgtgc ctgctcacca cggccaccac
     1921 ccagaagctc ggcaccctgt cggccatctg cggggcctcg aacgccgcag gcatcggcat
     1981 cgcggcgggg ctcgtgtacc tgggcggcgg cgggccggcc cagatggacc tggccatcca
     2041 caacatggtg ggcaacctcg ccggccttat ctgcgacggc gccaagatcg gctgcgccat
     2101 gaaggccatg accggcgtgg aggcggcctt ccggtccgct tccctcgccc tggcgggctt
     2161 cggcattccg gagaccgacg gcatcgtcgg cgcgacgggc gaggcctccc tcgccaacct
     2221 gggccgcctc gcccagcgcg gcatggccgg cgccgacacg gaaatcctcg acatcatgca
     2281 ggccaagctg ggctgatcag gcccgggcgg gtccggccga cgtccaggcc agcagcagga
     2341 tcgccgccag ggccgaccag cccaggggcg agggatccga gccgaggcgg ggcagctcct
     2401 ccgccagcag gcggcccagg ctgtcgtggc ccggcccggg accgaggccc agcgccgcga
     2461 g
//
LOCUS       DATGWW010000424         1569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_345410, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000424 DATGWW010000000
VERSION     DATGWW010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345410"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VK150_06145"
     CDS             complement(<1..296)
                     /locus_tag="VK150_06145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30923.1"
                     /translation="MRHPALTLLCLPALASEAPNPPHVAIPRLPQAPSMAWDADLSTW
                     TGALRITEFGLFIPNDKGENPWPTVVHVGWGPDALYLAVEALDPDPSKIHAARH"
     gene            complement(466..>1569)
                     /locus_tag="VK150_06150"
     CDS             complement(466..>1569)
                     /locus_tag="VK150_06150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30924.1"
                     /translation="GANGAVGVDHLATRDTAAAVKFGTDSRGSGFSFLGTDKTLMGGP
                     DRVGGQSGGVYVDQYLGSEFHFIGSAMSATSHLPQADGSLTSKRGTATSAELDWNTRN
                     WAAWFQAQATSPDLALLSGFTDLPGYRRQVAGFEWRNNWNEGTIASANISPRWRKLTW
                     WNGDPMERILGVDASFETTGRLSFFLNWDAAGRMWAEDRVRSVATRALTLGGNWRRLA
                     TARFGWNATEGRTLDLSSGEPARFRSASLFFYGTVSALSYNLTAKQSGLDREDDHLHL
                     IRARQLALTGSWQFPHAFYLKTQAFVVRYDGTLAEGVDKFLKGFLGWQPNAFTNAYVG
                     WSGQRRRDPSAVVASERMVERGLFAKVAYAMQF"
BASE COUNT          239 a          500 c          597 g          233 t
ORIGIN      
        1 atgtggcggg cggcgtggat cttcgaggga tcaggatcca gggcttcgac ggcgaggtag
       61 agcgcatcgg ggccccagcc cacatgcacg acggtgggcc aggggttctc gcctttgtcg
      121 ttggggatga acaagccgaa ctcggtgatc ctcagggccc cggtccaggt ggacaggtcc
      181 gcgtcccagg ccatggaggg ggcctggggc aggcggggaa tggccacgtg gggagggttc
      241 ggcgcctcgg acgccagggc gggcaggcag agcaaggtca gggccggatg acgcatgtgg
      301 atctccccag ccggacgatc cgcgccgtcc agactgtgga ttttcagatc gcgtgccgtg
      361 acaacccacc cctgccgacc cccggtgctc gcggttcatc ccagcggccc ggggaacggc
      421 cttcgccgtg gggcgagagt ccgagaactg cccctggaac tgcctctaga actgcatggc
      481 gtaggccacc ttcgcgaaga ggccccgttc caccatccgc tcgctggcca ccaccgcgga
      541 gggatcgcgg cggcgctggc cggaccagcc cacgtaggcg ttggtgaagg cgttgggctg
      601 ccagccgagg aagcccttga ggaacttgtc gacgccctcc gccagggtgc cgtcgtagcg
      661 caccacgaag gcctgggtct tcaggtagaa cgcgtggggg aactgccagc tgccggtgag
      721 ggcgagctga cgggcccgga tgaggtgcag gtgatcgtcc tcgcggtcga ggcccgactg
      781 cttggcggtc aggttgtagg acagggcgct gacggtgccg tagaagaaga gggaggccga
      841 gcggaaccgc gcgggttcgc cggaggacaa atccagcgtt cggccctcgg tggcgttcca
      901 cccaaagcgg gccgtggcca ggcgccgcca gttgccgccc agggtgagcg cccgggtcgc
      961 cacggagcgc acccggtcct cggcccacat gcggccggcc gcgtcccagt tcaggaagaa
     1021 gctcagccgt cccgtggtct cgaaggaggc gtcgacgccc aggatccgtt ccatcgggtc
     1081 gccgttccac caggtgagct tccgccagcg gggcgagatg ttggcggagg cgatggttcc
     1141 ctcgttccag ttgttccgcc actcgaaccc cgcgacctgg cgccggtagc ccgggaggtc
     1201 cgtgaagccc gagagcagcg cgaggtcggg gctggtggcc tgggcctgga accaggcggc
     1261 ccagttgcgg gtgttccagt cgagctcggc ggaggtggcg gtgccccgct tggaggtcag
     1321 cgagccgtcg gcctgaggca ggtgggaggt ggcgctcatg gcgctgccga tgaagtggaa
     1381 ctcggagccc aagtactgat ccacgtagac gccgccgctc tggccaccga cgcggtcggg
     1441 gccgcccatc agggtcttgt cggtgcccag gaaggagaat cccgagcccc ggctgtcggt
     1501 gccgaacttc acggcggcgg cggtgtcgcg ggtggccagg tggtccacgc ccacggcgcc
     1561 gttggcacc
//
LOCUS       DATGWW010000425         3939 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_441085, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000425 DATGWW010000000
VERSION     DATGWW010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3939
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441085"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..545)
                     /locus_tag="VK150_06155"
     CDS             complement(<1..545)
                     /locus_tag="VK150_06155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30925.1"
                     /translation="MTMSLEFRSGILAAYPDVYTPEALRALEALAPLDARRRELMALR
                     TARRKRRAERRERITFLDPASLIPGTQITVADARAGNFDGAVIPQDLQRQWIQGTGPA
                     TKPRSDVRSGIRNVAYALLSGADGWMFDGEDALGQVDTMSLDNHRNLKLAIQRDPLFL
                     EVAEEVAGEMNQWAEGFFGHP"
     gene            complement(598..1740)
                     /locus_tag="VK150_06160"
     CDS             complement(598..1740)
                     /locus_tag="VK150_06160"
                     /EC_number="2.7.1.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR00045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HLP30926.1"
                     /translation="MRIIVAPDSFKGSVSALGVAEAMARGIHAVFPDADVLKVPIADG
                     GEGTVEALVAATGGRLMHTDVRGPLGDPVRAHWGISGDGTTAFLEMASASGLPLISKE
                     RRDPRVTSTFGTGELVKAALDAGLRKLVLGIGGSATNDGGAGMARALGVRFLDAEGRD
                     LPEGGAALARLARVDLSDLDPRLAECALLVACDVDNPLCGPRGASAVYGPQKGATPEM
                     VAELDAALGMFAKIAAQTTGREVALRPGAGAAGGLGAGLLFFTPASLRPGVAIVLETT
                     GFEALVQGADLVLTGEGRTDFQTAMGKAPVGVAAVARRHGVPVVCLSGGLGDGADEVL
                     AHGIDALVPTVPQPMTLEACMAQGPALVEAAAARVCRLLKVGMFLQ"
     gene            complement(1916..3541)
                     /locus_tag="VK150_06165"
     CDS             complement(1916..3541)
                     /locus_tag="VK150_06165"
                     /inference="COORDINATES: protein motif:HMM:TIGR00795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HLP30927.1"
                     /translation="MHFGALAATLPLIVLLIGIPLLMKPAAKVAPIAWLVTVLTAIFV
                     FHFPAKVTLLAAFQGGLTGLFPIMYIPFGALVVYNVLKATGWMDKMQGAMANLTVDRR
                     AQALLIAFGFGAFLEGICGFGAPVAIPASILIGLGYNPMMAALVCLVANTGPVPFGSL
                     AIPTVTLAKTTGLDVMKLSQMTGRFMAPLALIMAFATVYAMSKSKGLKGALGTILVAG
                     LSFSITEFLVSNFIGADLTSVLAGLACLVATATYLNFQKHAQPWIFEGDAPVSDKPTE
                     FHAKELFLSWLPYLLLAVLVIAVNLPRTKPFFNGSAAGWGWVLVKAQIYNPGKLYAFT
                     WLQSPGTIMLIAGLIAFPFMGIKYAVMGEQFGKTFKQMIPSFIAVACILSIAEVMNLA
                     LPIVDPKTKLAVVGDLATKQISMVATMANGIVALVSRQIYPLLSPLFGTIGVFLTGSN
                     TSANALFGNLQKLTAQGMGLSDILMAAAGSAGASAGKMISPQSIVIAATAVGLAGKEG
                     LIMRQTIKYTIPYVILLGLMVWGFAFLFPGLVP"
     gene            complement(3696..>3939)
                     /locus_tag="VK150_06170"
     CDS             complement(3696..>3939)
                     /locus_tag="VK150_06170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30928.1"
                     /translation="SPLIDGGSVFVPQSGTNAPTGEWIIEGEGVTPDIEVENDPASML
                     AGRDLQLERGVQEVLKRMAEKPMALPKRPADPIKTR"
BASE COUNT          671 a         1248 c         1416 g          604 t
ORIGIN      
        1 ctggggtggc cgaaaaagcc ttccgcccac tggttcatct cgcctgcgac ttcttcggcc
       61 acctcgagaa acagcggatc ccgttgaatg gccagcttga ggttgcggtg gttgtccagg
      121 gacatggtgt ccacctggcc cagggcatcc tcgccgtcga acatccagcc gtccgccccg
      181 gagagcaggg cgtaggccac gttgcggatg cccgagcgaa cgtcggagcg gggcttggtg
      241 gcgggccccg tgccttggat ccactggcgc tggaggtcct gcgggatgac ggccccgtcg
      301 aagttcccgg cgcgggcgtc ggccacggtg atctgggtgc ctgggatgag ggaggcggga
      361 tccaggaacg tgatgcgctc acggcgctcc gcgcggcgct tccggcgggc cgtgcgcagg
      421 gccatgagct cgcggcgccg cgcgtcgagg ggcgcgaggg cctccagggc gcggagggcc
      481 tccggcgtgt agacgtccgg gtaggccgcc aggatccccg accggaattc gagggacatc
      541 gtcatcacca acctccgcgt gcggcattca ggggaatgcc accattgttt cgggaattca
      601 ctgtaggaac atgcctacct tcagtaggcg gcacacccgg gcggcggcgg cctccaccag
      661 ggccggcccc tgggccatgc aggcctccag ggtcatgggc tggggcacag ttgggaccag
      721 ggcatcgatg ccgtgggcca gcacctcgtc cgcgccgtcc ccgagtcccc ccgagaggca
      781 caccacggga accccatggc gccgggccac ggccgcaaca cccacggggg ccttgcccat
      841 ggcggtctgg aagtccgtcc ggccctcgcc ggtgaggacc aggtccgcgc cctggaccag
      901 ggcctcgaaa cccgtggtct ccagcacgat ggccacgccg ggacggaggc tcgccggcgt
      961 gaagaagagc agccccgcgc ccagcccgcc ggcggcgccg gcgccgggcc gcagggccac
     1021 ctcacggccc gtggtctggg ccgcgatctt cgcgaacatg cccagcgctg cgtccagttc
     1081 cgccaccatc tccggcgtgg cgcctttctg cgggccatag acagcggagg cgccgcgggg
     1141 gccgcagagc gggttgtcca cgtcacaggc cacgaggagg gcgcattcgg cgaggcgggg
     1201 gtccagatcc gataggtcca cgcgggcgag ccgtgccagg gcggcgccgc cttccggcag
     1261 atcacggcct tcggcatcga ggaagcgcac gcccagggcc cgggccatgc ccgcgccccc
     1321 gtcattggtg gcgctaccgc cgatgccgag gaccagcttg cggagcccgg cgtccagggc
     1381 cgccttcacc aattcgccag tgccgaaggt gctggtcacg cggggatccc ggcgctcctt
     1441 ggaaatcagc ggaaggcccg aggccgaggc catctccagg aaggccgtcg tgccgtcacc
     1501 ggagatgccc cagtgggcgc gaacggggtc gcccaggggg ccgcgcacgt ccgtgtgcat
     1561 gaggcggccg ccggtggcgg ccaccagggc ctcgacggtg ccctcgccgc cgtcggcgat
     1621 gggcaccttg aggacgtccg catcggggaa cacggcatgg atgccccgcg ccatggcctc
     1681 ggccacgccg agggccgaca cgctgccctt gaaggaatcc ggagccacga tgatgcgcat
     1741 gggcgtgtga cctcttctgt cgtctaaaaa agattcacca ccaagacacc agggcgccaa
     1801 gaactgcgac cgaatggtct tttcgctctt cttggtgtct tctcggtacc cgcagtacgg
     1861 atacgcgaga caaaaataca tctggtgtct tggtggtcat tcatttcatc caccctcagg
     1921 gaacgagccc cgggaacagg aacgcgaagc cccagaccat gaggcccagc agaatcacgt
     1981 acgggatggt gtacttgatc gtctggcgca tgatgaggcc ttccttgccg gccagaccca
     2041 ccgcggtggc ggcgatgacg atgctctggg gggagatcat cttgcctgcg gaggcaccgg
     2101 cgctgccggc ggcggccatg aggatgtcgg agagccccat gccctgggcc gtgagtttct
     2161 gcaggttgcc gaagagggcg ttcgcagagg tgttgctgcc cgtgaggaag acgccgatgg
     2221 tgccgaagag cgggctcagc agcgggtaga tctgccggct caccagggcc acgatgccgt
     2281 tggccatggt ggccaccatg gagatctgct tggtggcgag gtcgcccacc accgccagct
     2341 tggtcttcgg gtcgacgatc ggcagggcga gattcatcac ctcggcgatg gagaggatgc
     2401 aggccaccgc gatgaaggag gggatcatct gcttgaaggt cttgccgaac tgctcgccca
     2461 tcacggcgta tttgatgccc atgaagggga aggcgatgag cccggcgatg agcatgatgg
     2521 tgccggggct ctgcagccag gtgaaggcgt agagcttgcc ggggttgtag atctgggcct
     2581 tgacgagcac ccagccccag ccagcggcgc tgccgttgaa gaagggcttg gtcctgggca
     2641 ggttcacggc gatgacgagg acggccagca gcaggtaggg gagccaggag aggaacagct
     2701 ccttggcgtg gaactcggtg ggcttgtcgc tcaccggggc gtcgccctcg aagatccagg
     2761 gctgggcgtg cttctggaag ttcaggtagg tggccgtggc cacgaggcag gcgaggccgg
     2821 cgagaacgga ggtgaggtcg gcgccgatga agttggagac gaggaattcg gtgatggaga
     2881 agctcaggcc cgccaccagg atggtgccca gggcgccctt caggcccttg gacttcgaca
     2941 tggcgtagac ggtggcgaag gccatgatca gggcgagggg cgccatgaac cggcccgtca
     3001 tctgcgagag cttcatcacg tcgaggcccg tggtcttggc cagggtcacc gtggggatcg
     3061 ccagcgagcc gaagggcacg ggccccgtgt tggccaccag gcacaccagg gcggccatca
     3121 tcgggttgta gcccaggccg atgaggatgc tggccggaat cgccaccggc gcgccgaagc
     3181 cgcagatgcc ctccaggaag gcgccgaagc cgaaggcgat gagcagcgcc tgggcgcggc
     3241 gatccaccgt gaggttcgcc atggcgccct gcatcttgtc catccagccc gtggccttca
     3301 gcacgttgta gaccaccagc gcgccgaagg ggatgtacat gatcgggaac aggccggtga
     3361 ggccgccctg gaacgcggcg agcagcgtca ccttcgcggg gaagtggaag acgaagatgg
     3421 cggtgagcac cgtcaccagc caggcgatgg gtgccacctt ggcggcgggt ttcatcagca
     3481 ggggaatgcc gatgagcaac acgatgagcg gcagcgtggc tgcgagggcc ccgaaatgca
     3541 ttgtctacct ccggatcaat tggaagaaac agtagccgga gatggtctga ccaccaagcc
     3601 aaaaaagcct caataaacga gggccggcgc tggtgggcgc cggccctttt acccgtcatt
     3661 ccttcacttg gataattgcg gtaggaccac cagacctacc gggtcttgat ggggtcggcc
     3721 gggcgcttgg gcagggccat gggcttctcg gccatgcgct tcagcacttc ctgaacgccc
     3781 cgctccaact gcaggtcgcg gccggccagc atggaggcgg ggtcgttctc cacctcgatg
     3841 tcgggggtca cgccctcgcc ttcgatgatc cattcgccgg tgggcgcgtt ggtgcccgac
     3901 tggggcacga agacgctgcc gccgtcgatg agtggcgag
//
LOCUS       DATGWW010000426         2230 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_78958, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000426 DATGWW010000000
VERSION     DATGWW010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78958"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2048
                     /locus_tag="VK150_06175"
     CDS             <1..2048
                     /locus_tag="VK150_06175"
                     /inference="COORDINATES: protein motif:HMM:TIGR02669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SpoIID/LytB domain-containing protein"
                     /protein_id="HLP30929.1"
                     /translation="PPLRIGLDTQATEWVVSLEGGGQICDRAGKPLLKLASDEKVRIW
                     WDSRGVSDPTAEYRIQVGRPHSAAEAAALMKRLKDLGEMPDRVKVPDADTWRVLTGHF
                     REAAQAEPVLQKLQDLGFDELWVASESKPSEPRKGRALYAVTDRYDRRALPLAGVWLK
                     PAGELVTLGGKGRYRGKVEIFPNAQGRLTVVNTLDLETYLRGVVPKEMGAWEFPSLEA
                     LKAQAVAARTYAVANRGKRAADGFDMGDTVADQVYGGRDGEQSLTDRAIQETEGLFAT
                     YGGKPIQALFMANCGGHTTDVAHVFGGDAPYLKAVPCYPARPLTLPYASGVPVTTEAR
                     QPWLSWELLRLASVAIPVEVLTGDRLARPATREDLAQPVRLLQQHLALEARPLAREGH
                     LILALARAFGFHRVVEGQERPQDAAYFLPDALPEDRLLATFLTRRGVVPPALWAAPEP
                     LTLREALQTLGRLWQELEPFTPGEGSLLMDRQVRRKRGGPEPLALAPNLLLAEEAPDG
                     SLRLVPKADIQVGDRLKWIPGEEGPAQVLVRRLDPDGAAWDRYNPTAHWRVEYTEADL
                     LATVRKRIKVAGIRDLRAQYNDQGRVLDLTLVDVQGAPHRVRGMHIRGLLGLKDNVFR
                     WLTVGQGAQRRWIFYGRGWGHGLGMCQTGAYGMALEGATFTQVLQHYYPGMTLQRVD"
BASE COUNT          340 a          818 c          769 g          303 t
ORIGIN      
        1 agcccccatt gcggatcggc ctcgacaccc aggccacgga atgggtcgtc tccctcgaag
       61 gcggcggcca gatctgcgac cgcgccggca agcccctgct gaaactagcc tccgacgaga
      121 aggtgcgcat ctggtgggac agccgcggcg tgtccgatcc caccgccgag taccgcatcc
      181 aggtgggcag gccgcacagc gccgcggaag cagccgcgct gatgaagcgc ctgaaggacc
      241 tgggcgagat gcccgaccgc gtgaaggtgc ccgacgccga cacctggcgg gtgctcacgg
      301 gccacttccg cgaggccgcc caggcggaac cggtactgca gaagctccag gacctgggct
      361 ttgacgagct gtgggtggcc tccgaatcga agcccagcga gccgcgcaag ggccgggcgc
      421 tctatgccgt caccgaccgc tacgaccgcc gcgcgttgcc cttggcgggc gtgtggctga
      481 agcccgccgg agaactggtc acgctgggcg gcaagggccg gtaccgcggc aaggtggaga
      541 tcttccccaa cgcccagggc cgcctcaccg tggtgaacac gctggatctg gagacctacc
      601 tgcggggcgt ggtgcccaag gagatgggcg cctgggagtt ccccagcctg gaggccctca
      661 aggcccaggc ggtcgccgcc cgcacctacg cggtggccaa ccgcgggaag cgcgccgcgg
      721 acggcttcga catgggcgat acggtagccg accaggtcta cggcggccgc gacggcgagc
      781 agagcctcac ggaccgcgcg atccaggaga ccgagggcct cttcgccacc tacggcggca
      841 agcccatcca ggccctgttc atggccaact gcggcggcca caccaccgac gtggcccacg
      901 tcttcggcgg ggacgccccg tatctcaagg ccgtgccctg ctatcccgcc aggcccctga
      961 ccctgcccta cgcctccggc gtgccggtca ctacggaagc ccgccagccc tggctcagct
     1021 gggagctcct gcgcctcgcc tccgtcgcca tccctgtcga ggtcctcacg ggcgaccggc
     1081 tcgcccggcc cgccacccgc gaggacctcg cgcagcccgt gaggctcctc caacagcatc
     1141 tggctctgga agccaggccc ctcgcccgcg aagggcacct gatcctcgcc ctcgcccggg
     1201 ccttcggctt ccaccgcgtg gtggagggtc aggagcggcc ccaggacgcg gcctacttcc
     1261 tcccggacgc cctgccggaa gatcgcctgc tggcgacctt cctcacccgg cggggcgtgg
     1321 tgccccccgc cctgtgggcc gcgcctgaac ccctcacgct gagggaagcc ctgcagaccc
     1381 tgggccggct ctggcaggag ctggagccct tcacccccgg cgagggttcg ctgctcatgg
     1441 accgccaggt gcgccgcaaa cggggcgggc ccgagccgct ggccctggcg ccgaacctgc
     1501 tgctggcgga ggaggccccg gacggcagcc tgcggctggt gcccaaggcc gacatccagg
     1561 tgggcgaccg gctgaagtgg atccccggcg aggaggggcc ggcccaggtg ctggtgcgcc
     1621 gcctggatcc cgatggcgcc gcctgggacc gctacaaccc cacggcccac tggcgcgtgg
     1681 aatacaccga ggccgacctg ctggccaccg tgcgcaagcg catcaaggtc gccgggatcc
     1741 gcgatctgcg ggcccagtac aacgaccagg gccgggtgct ggacctcacc ctggtggacg
     1801 tccagggcgc cccccaccgg gtgcggggca tgcacatccg gggactgctg ggcctcaagg
     1861 acaacgtctt ccgctggctc accgtgggcc agggcgctca gcgccgctgg atcttctacg
     1921 gacgtggctg ggggcacggc ctgggcatgt gccagaccgg cgcctatggc atggccctgg
     1981 agggggcgac cttcactcaa gtgctgcaac actattaccc cggcatgaca ctccagcggg
     2041 tggactgatt ttttaccggg attttccatc caggcattga cggaggggcc acatggcccc
     2101 aggttggcct tccaccgggg gagactgggg atgggtatgg acgcttggat cctgggcgcg
     2161 ccgctgaaag tgctgcggca ggaggatcat ccgtaccgcg agaccaccct cgccaccttg
     2221 ggccgccacg
//
LOCUS       DATGWW010000427         1711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_378851, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000427 DATGWW010000000
VERSION     DATGWW010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378851"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1088
                     /locus_tag="VK150_06180"
     CDS             <1..1088
                     /locus_tag="VK150_06180"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: protein motif:HMM:NF003652.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006222 - UMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HLP30930.1"
                     /translation="CPGGPRRLSGGHGHRHRHGEVMDLYGALRPLIFRLDPETAHDLA
                     FWLGARVCAWPRLPEPELPAALSRTAFGLDFPSPLGLAAGLDKGATLLPLWKALGFGH
                     VEIGTVTPRPQPGNPKPRLFRFPQAGLILNRMGFNSEGAEVVAARLKHRPEGLIVGGN
                     LGKNKETPEAQALEDYRAAYRLIAPQVDYIALNVSSPNTPGLRNLQAPEALKPLLAGM
                     LDLRRELGLERQPLLLKLAPDLAPEDLEAIVEVAVASGISGLIATNTTLDRGVVAEPL
                     RALVEAKGAGGLSGVPLKTKARDIRRRIFAALRGRLPLVACGGLGSAEDVQGALDDGA
                     ALAQVYSALIFEGPSLVGRIHRGLAEF"
     gene            1142..>1711
                     /locus_tag="VK150_06185"
     CDS             1142..>1711
                     /locus_tag="VK150_06185"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLP30931.1"
                     /translation="MLSLHSKIRDPRLLPLADKVLNGERLTYEDGLLLYETPDLSGLG
                     AMAHHVRLQRHGRAAYYVVSRRLSYTNVCYTHCQFCAFQARPGDPRAYVLSPEDVVRE
                     LEKPENAGVRELHMVAGHYPKLKIDYFETLFRAIKARFPELHLKVFTMVEMDYYARVS
                     GLTVEQFLDRCVAAGLESCPGGGAEIFDEE"
BASE COUNT          265 a          630 c          566 g          250 t
ORIGIN      
        1 catgtccagg tggcccgcga agactttccg gaggtcacgg ccaccgccac cgtcacggtg
       61 aagtgatgga cctgtacggc gccctgcgtc cgctgatctt ccgcctcgac cccgaaaccg
      121 cccacgacct tgccttctgg ctgggggctc gggtgtgcgc ctggccccgc ctcccggagc
      181 cggagctgcc cgccgccctg agccggacgg ccttcggcct cgactttccc agccccctgg
      241 gcctggccgc gggtctcgac aaaggcgcga ccctgctgcc gctctggaag gccctgggct
      301 tcggccacgt ggagatcggc accgtcacgc cgcggcccca accgggcaac cccaaaccac
      361 gcctgttccg cttcccccag gcgggcctca tcctcaaccg catgggcttc aacagcgagg
      421 gcgccgaggt ggtggccgcc cgtttgaaac atcggcccga ggggctcatc gtgggcggca
      481 acctcggcaa gaacaaggag acgccggagg cccaggccct ggaggactac cgcgccgcgt
      541 accgcctcat cgccccgcag gtggactaca tcgccctcaa cgtcagcagc cccaacacgc
      601 cgggcctgcg gaacctccag gcccccgagg ccctgaagcc cctgctggcg ggcatgctgg
      661 atctgcgcag ggaactgggc ctggaacgcc agcccctgct gctcaagctg gcgccggacc
      721 tggccccgga agacctggag gccatcgtcg aggtggccgt ggcctccggc atctccggcc
      781 tcatcgccac caacaccacc ctggaccgcg gcgtggtggc ggaacccctg cgcgccctgg
      841 tggaagccaa gggcgccggc gggctcagcg gcgtgcccct gaaaaccaag gcccgcgaca
      901 tccgccggcg catcttcgcc gccctgcggg gccgcctgcc cctggtggcc tgcggcggac
      961 tgggatcggc cgaagatgtg cagggtgccc tggatgacgg tgcggcactg gcccaggtct
     1021 acagcgcgct gatcttcgaa ggtccctccc tggtggggcg tatccaccgg ggattggccg
     1081 agttctgaac aaggctcgga ggcctggaag ctcggcgcta cactggaagg ccgaggcatt
     1141 gatgttgtca ctgcattcca agatccgaga cccccgactc ctcccgctgg cggacaaggt
     1201 gctgaacggc gagcgcctga cctacgagga tggcctgctg ctctacgaga cgccggatct
     1261 cagcggtctc ggcgccatgg cccaccatgt gcgcctgcag cgccacggcc gggccgccta
     1321 ctacgtggtg agccggcgcc tgtcgtacac caacgtctgc tacacccact gccagttctg
     1381 cgccttccag gcgcgcccgg gcgacccgag ggcctacgtg ctgagccccg aggacgtggt
     1441 gcgcgagctg gagaagccgg agaacgccgg cgtgcgcgag ctgcacatgg tggccgggca
     1501 ctaccccaag ctgaagatcg actacttcga gaccctgttc cgcgccatca aggcgcgctt
     1561 ccccgagctc cacctgaagg tgttcaccat ggtggagatg gactactacg cccgggtcag
     1621 cgggctcacc gtggagcagt tcctcgaccg ctgcgtcgcc gccggcctgg agagctgccc
     1681 cgggggcggc gccgagatct tcgacgagga g
//
LOCUS       DATGWW010000428         1567 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_112798, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000428 DATGWW010000000
VERSION     DATGWW010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112798"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1106)
                     /locus_tag="VK150_06190"
     CDS             complement(<1..1106)
                     /locus_tag="VK150_06190"
                     /inference="COORDINATES: protein motif:HMM:NF013314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLP30932.1"
                     /translation="MVVIGGGHAGIEAAHVAARMGMATTLLTMNLDQIGQMSCNPSIG
                     GVGKGHMVRELDALGGAMGRLIDATGIHFRILNESRGVAVRGPRAQADKVKYRIAARN
                     LLEHTPNLHLRQGTAVGLLWREGTQGLRGVELLDGSVIPCEAVVVTSGTFLNGRILIG
                     DKRLEAGRAGEPASTHLAEQLRSLGLRHRRLKTGTSPRLARASIDFHRLTVQPGDAPP
                     RPFSFFSPGIPQPQVPCHIVHTTAETEAIVRENLPKSSLYGGHIEGVGPRYCPSIEDK
                     FVKFPDKGRHQIFVEPESLETEEIYLAGLSTSMPPDVQVRMVRSLPGFEAAEILRPGY
                     AIEYDSFDPLQLRRDLSVNGLEGAWFAGQINGTTG"
     gene            1193..>1567
                     /locus_tag="VK150_06195"
     CDS             1193..>1567
                     /locus_tag="VK150_06195"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HLP30933.1"
                     /translation="MRPRLSPEERRARRQRAMRRSMFVLPSSITMASIFCGFSSVVMS
                     INAAGATPERYFLWAAGLLVLAGVFDGLDGRVARATNTATEFGVQLDSLADVVSFGMA
                     PAILAYRYGFFQLGIHDSHLRAA"
BASE COUNT          226 a          529 c          548 g          264 t
ORIGIN      
        1 cctgtggtgc cgttgatctg gcccgcgaac caggcgccct ccaggccatt cacggagagg
       61 tcccggcgca gttgcagggg atcgaagctg tcgtactcga tggcgtagcc gggccgcagg
      121 atctcggcgg cctcgaagcc cggcaggctg cggaccatgc gcacctgcac gtcgggcggc
      181 atggaggtgg acagccccgc gaggtagatc tcctcggtct cgaggctttc gggctccacg
      241 aagatctggt gccggccctt gtcggggaac ttcacgaact tgtcctcgat ggaggggcaa
      301 tagcggggtc cgacaccctc gatgtggccg ccgtagaggc tcgacttggg caggttctcg
      361 cgcacgatgg cttcggtttc cgccgtggtg tgcacgatgt ggcagggcac ctggggctgg
      421 gggatgccgg ggctgaagaa gctgaagggc cggggcggag cgtcaccggg ctgcacggtc
      481 agtcggtgga aatcaatgga ggccctggcc aggcgtgggc tggtgccggt cttcagtcgg
      541 cggtggcgca gccccaagga acgcagctgt tccgccaaat gggtgctggc gggctcaccg
      601 gcgcggcccg cctccagccg cttgtcgccg atgaggatgc ggccattcag gaaggtgcca
      661 ctggtgacca ccacggcctc gcaggggatc acggaaccat ccagcagctc cacgccgcgg
      721 aggccctggg tcccttcccg ccacaacagc ccgaccgcgg tgccctggcg caggtgcagg
      781 ttcggcgtgt gttccagcag gttccgggcg gcgatgcggt acttcacctt gtcggcctgg
      841 gcccgggggc cgcgcacggc cacgccgcgg ctttcgttca ggatgcggaa gtggatgccg
      901 gtggcgtcga tgaggcggcc catggcgcca ccgagagcat ccagttcgcg caccatgtga
      961 cccttgccca cgccgccgat gctcgggttg cagctcatct ggccgatctg gtcgaggttc
     1021 atggtgagga gcgtggtggc catgcccatg cgggcagcca catgcgccgc ctcaatgcct
     1081 gcgtgtccgc caccgatcac caccacctgc ctcaagggac ctccagaggt gccaggatac
     1141 ccttccccca cgggccggcc ccccacgggg cgggatgtga gaaactgggg ccatgcgacc
     1201 ccgcctgagc cccgaagaac gccgcgcccg acgtcagcgc gccatgcgac ggtccatgtt
     1261 cgtgctgccc tccagcatca ccatggcctc cattttctgc ggcttctcca gcgtggtgat
     1321 gtcgatcaac gccgccggcg ccaccccgga gcgctatttc ctctgggccg cgggcttgct
     1381 ggtgctggcg ggcgtcttcg acggcctgga tggacgggtg gcccgggcca ccaacaccgc
     1441 cacggagttc ggcgttcagt tggacagcct ggccgacgtg gtgagcttcg gcatggcccc
     1501 ggccatcctg gcctaccgct acggcttctt ccagctgggc atccacgatt cccacctgcg
     1561 ggccgcg
//
LOCUS       DATGWW010000429         1581 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_79110, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000429 DATGWW010000000
VERSION     DATGWW010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79110"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            271..903
                     /locus_tag="VK150_06200"
     CDS             271..903
                     /locus_tag="VK150_06200"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HLP30934.1"
                     /translation="MVSLQAVAGISAVALGMVLTPGPNMVYLVSRSVTQGHRAGLVSL
                     AGVAAGYLVYLVLAAAGLVAVLTLVPPVYLAIKLAGAAYLLWLAWCAVRPGGTSAFAP
                     KALPADPPRRLFAMGLVTNLLNPKIAILYVSLLPQFVDPGRGHLAEQSLILGLAQITV
                     SLSVNALIVMSAGTVSAFLTRRPAWLRTQRYLMGTVLAGMALRIAVAPNR"
     gene            999..>1581
                     /locus_tag="VK150_06205"
     CDS             999..>1581
                     /locus_tag="VK150_06205"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HLP30935.1"
                     /translation="MKRCLPLLVPALLLAGSPAKPVHVRYERALSPRMVPLLVEAIRF
                     PTVAGNAKAWADQKAWLEHLAKGLGFTVRDAGKVMEVDLPASGSGAVEAPVLGLLVHG
                     DVQPPGDHWTAPPFEGTVRKGRVFGRGAADDKGPMVQALLAMKALKEAGPLRTYTIRL
                     LVGSDEESGSTDITDYLKTNPPPAFSLVLDSGFP"
BASE COUNT          214 a          570 c          528 g          269 t
ORIGIN      
        1 gggggcgcca gggctcgtcg atcttcgcga aaccagaggc gaggttgacc ttgtccatga
       61 cttgcctctc cagcgaaggc ccggcgtggc aggagccggg ttccctagat cggatgcccg
      121 acccctcccc atcatgccgg attgcctggt gtcccgggct ggcgtcagcc cccgccagat
      181 catggttggt cctggggaac cggctttcac cccacggcgc ccctgcttct ccgccatccg
      241 cggcattctg ccggctccag ggggaggccc atggtcagtc tgcaagccgt tgccgggatc
      301 tcagccgtgg cgctagggat ggtgctcacc ccggggccca acatggtcta cctcgtctca
      361 cggtccgtga cccagggcca tcgggcgggg ctggtctccc tggcgggggt cgcggcgggc
      421 tacctggtct acctggtgct cgcggctgcg ggcctggtgg ccgtgcttac cctcgtgccg
      481 ccggtctacc tggccatcaa gctcgcaggc gcggcctacc tgctctggct ggcctggtgc
      541 gccgtgcggc ccggcggcac ctccgcattc gcgccgaaag cccttcccgc ggacccgccc
      601 cgccggctct tcgccatggg cctggtgacc aacctgctca atccgaagat cgcgatcctc
      661 tacgtatcgc tgctgccgca gttcgtggat ccgggacgcg gccacctcgc agagcagagc
      721 ctcatcctgg gcctggccca gatcacggtc tccctcagcg tcaacgcctt gatcgtcatg
      781 agcgccggca ccgtgtccgc cttcctcacc cggcggcccg cctggctccg cacccagcgc
      841 tacctcatgg gcacggtgct ggccggcatg gcccttcgca tcgccgtggc gcccaaccgc
      901 tgatccggcg ggtcggccgg agtcccaccc ccgggcccgg ggcgtgacgc cgcctgtcca
      961 gacatctaac cttgggattg gaagccgagg agaccgacgt gaaacgatgc cttccgctgt
     1021 tggtgcctgc gctcctgctg gcgggttccc ccgccaagcc cgtgcacgtt cgctacgagc
     1081 gcgcgctgtc gccccgcatg gtgcctctcc tggtggaagc catccgcttt ccgacggtcg
     1141 ccgggaacgc gaaagcctgg gcggaccaga aagcctggct ggagcacctg gcgaagggcc
     1201 tgggcttcac cgtgagggat gccgggaagg tcatggaggt ggacctgccc gcctcgggtt
     1261 ccggcgcggt cgaggcgccg gtcctcggac ttctggtgca cggagacgtg cagcctccag
     1321 gcgaccactg gaccgcgcct ccctttgaag gcaccgtgcg gaaggggcgg gtattcggcc
     1381 gtggggcagc cgacgacaag ggtcccatgg tgcaggcgct cctggccatg aaggcgttga
     1441 aggaggccgg gccgttgcga acctacacca tccgcctgct ggttggcagc gacgaggaaa
     1501 gcggcagcac ggacatcacc gactacctga agaccaaccc gccgccggcc ttcagtctcg
     1561 tgctggactc gggcttcccg g
//
LOCUS       DATGWW010000430         3020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_112821, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000430 DATGWW010000000
VERSION     DATGWW010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3020
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112821"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..553)
                     /locus_tag="VK150_06210"
     CDS             complement(<1..553)
                     /locus_tag="VK150_06210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30936.1"
                     /translation="MTRPLGWNWNATRAVAGACLCAITMLVLLACGGGKGKPEVIQYY
                     GNYHPTGWINTHGGQAVAGVDACTKCHEMSIIRVGSGIPTCMTSNCHHKSVPDWANPG
                     IHGMRAKLPLVSDGGSLVSCQLCHGKDFTGGLSANACSTCHGVKAPHPVGPWRTSGGT
                     PLTHTTTDTSNAAVCAQCHYPGSP"
     gene            1034..>3020
                     /locus_tag="VK150_06215"
     CDS             1034..>3020
                     /locus_tag="VK150_06215"
                     /inference="COORDINATES: protein motif:HMM:NF019135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HLP30937.1"
                     /translation="MQRTWRSEDGLLQDTVRALVETRDGFLWIGTEAGLVRFDGITFD
                     QYSRINLPGFTHNDIQCLAEGPGGSLWLGTTAPGIYVVTRGELRTLGQAEGLPDRPIR
                     SLLKDRAGTLWAAPSEGPLLRYDGSRFQAVPSDAVNLRIRALSQDREGTLWVGTAGSG
                     LWRMREGRLTLAALTSAEITALETGSDGTVWVGTRTQGLLALEEGRLEPPAWTRALPP
                     RPISALMFDRKGCLWIGVEQGGLFRRAEGRLEAAPGSPARRWTPLALLEDSSGAVWSG
                     SDDRGLRVIYPVPFRTMPVLGGDSEEPAWMACQDDQGTVWCLTGDQTLGLVRQGRIER
                     LLPAPPVGGPITALWPRKSGGLWIGTRNGEIHALDHGRWVRVRWPEGPPADTIQTLYE
                     DSQNNLWIATARQGVLRLSPGVPPLLFPAVQGVVAMIRKGDGPLYLASRTKGLGILEA
                     GEVRWLGRESGLGSNSVQALHLDEDGSLWLGTAEGLRRYREGAFQRFGDRPGPLLLAI
                     HGILEDRFHRMWLSTGQGVFRVPKAALLRSLEEAGPIPAVLFDHHDGMPSRETQHGPQ
                     PVAWLTREGDLYFPTSRGLARLGGEATMPPGPPLRLHVLKTEADETVLAEVRPVVVPP
                     GTHRFEVYYTATSLTRADKVRFRYRLEGAEHTWNEVGD"
BASE COUNT          441 a         1042 c         1050 g          487 t
ORIGIN      
        1 tgggcgagcc cgggtagtgg cactgggcgc agaccgccgc gttggaggtg tcggtggtgg
       61 tgtgggtgag cggcgtgcca cccgaggtcc gccaggggcc gaccgggtgg ggcgccttca
      121 cgccgtggca ggtagagcag gcgttggcgg agaggccacc ggtgaaatcc ttcccgtggc
      181 acagctggca ggaaaccagg ctgccgccgt cgctcaccag gggcagcttg gcgcgcatcc
      241 cgtggatccc ggggttcgcc caatcgggca cggacttgtg gtggcagttg gaggtcatgc
      301 aggtggggat gccgctgccc acccggatga tcgacatctc gtggcacttg gtgcaggcat
      361 ccacgcccgc caccgcctgg ccgccgtgag tgttgatcca gcccgtcgga tggtagttcc
      421 cgtagtactg gatgacctcc ggcttgccct tgccgccgcc acaggccagc aggaccagca
      481 tcgtgatggc gcagaggcag gcgccggcta ccgcacgcgt ggcgttccag ttccagccca
      541 ggggtcgggt catgaaggct cccatgcgcg atggcgcggc tgacacgcgg cttgagcccg
      601 agcgttcggg cgagggacgg agccagcggc ggaggacggt ggccattcta tgccacggat
      661 ttgccacgcg cgcgcttaag ttcatcggat tcatgtcggt atcccggggt tgatcccgac
      721 gctcccggac ccttgtaagg gttggtccca ggaggcgtca ggacaaggtt gggcgatgga
      781 aaaactatcg cgccccccca cccggatgcc catatcccga ttggatccat attcttagat
      841 cgttcgatct acctccttat ccgttgatac tccccttggg atagcctaac cttcagcttc
      901 catgcgccca cggattgcag gaaatcgatc ctcgctcaga ggagccatcg cccggcttgt
      961 catcggcctg ccatggctcg gcgcttccgt cacaggattc gccctggatc cgtcgctccc
     1021 tctgtccgtc cccgtgcagc gcacctggcg cagcgaggac gggttgcttc aggacacggt
     1081 ccgggccctc gtcgaaaccc gcgacggttt cctctggatc ggcaccgagg cggggctggt
     1141 gcggttcgac ggcatcacct tcgaccagta cagccggatc aacctgcccg gattcaccca
     1201 caacgacatc cagtgcctgg ctgagggtcc gggaggatcc ctctggctcg gcaccaccgc
     1261 ccctgggatc tacgtggtga cccgcggtga gctccggacg ttggggcagg ccgagggcct
     1321 gcccgaccgt ccgatccgga gcctgttgaa ggatcgcgcc ggaacgctct gggccgcgcc
     1381 ctcggagggg cccctgctcc gctacgacgg gtcacgattc caggcggtgc cttccgacgc
     1441 cgtgaacctg cgcatccggg ctctcagcca ggaccgggag ggcaccctgt gggtgggcac
     1501 cgcggggtcg ggcctgtggc ggatgcggga gggccggctg acgcttgcgg cattgacctc
     1561 cgcggagatc accgcactgg aaaccggttc tgacggaacg gtctgggtcg ggacccgcac
     1621 acagggcctg ctggccctgg aggaaggccg cctggagccc cccgcctgga cccgcgccct
     1681 gccgcccagg cccatcagcg ccctcatgtt cgaccgcaag ggatgcctat ggattggggt
     1741 cgaacagggc gggctgttcc gtcgcgccga gggccgcctg gaggccgcgc cgggctctcc
     1801 ggcccggcgc tggacgccgc tcgccttgct ggaggacagt tctggcgccg tgtggtcggg
     1861 cagcgatgac cgcggactcc gggtgatcta cccagttccg ttccggacca tgccagtcct
     1921 gggaggagac tcggaggaac ccgcgtggat ggcctgccag gatgaccagg gcacagtctg
     1981 gtgcctgact ggtgaccaga cccttggcct cgtgcgccag ggacgcatcg agcgcctcct
     2041 cccggcgccg ccggtgggcg ggcccatcac agccctgtgg ccccgcaaat ccggcggcct
     2101 ctggatcggc acccggaacg gcgagatcca cgctctcgat catggccggt gggtccgggt
     2161 ccggtggccg gagggccccc cggcggacac gatccagacc ctgtacgaag actcccagaa
     2221 caacctctgg atcgccaccg cgcggcaggg cgtgctccgg ctgtcgcccg gggtcccgcc
     2281 cctgctgttc cctgcggtgc agggtgtggt ggccatgatc cgcaagggcg atggcccgct
     2341 ctacctggcg agccgcacca aggggctcgg catcctcgag gccggcgagg tgcgctggct
     2401 gggccgggaa tcagggctcg gctccaacag tgtgcaggcc ctccacctgg acgaggacgg
     2461 ttcgctttgg ctcggcaccg ccgaagggct caggcggtac cgggagggcg ccttccagcg
     2521 cttcggcgac cgtccaggac ccttattgct ggcgatccac ggcatcctcg aggaccgctt
     2581 ccaccgcatg tggctgagca ccgggcaggg cgtcttccgc gtccccaaag ccgccctgct
     2641 gcgcagcctg gaggaggccg gaccgattcc cgccgtgctg ttcgaccatc acgacggcat
     2701 gccctcccgg gagacccagc atggccccca gccggtggcg tggctcacgc gggaggggga
     2761 tctctacttc cccaccagcc gagggctggc ccgcctgggc ggcgaggcca cgatgccccc
     2821 gggccctccc ctgcggctgc atgtcctcaa gaccgaggcc gacgagacgg tgctcgccga
     2881 ggtcaggccc gtcgtggtcc cgccgggcac gcaccgcttc gaggtgtact acaccgccac
     2941 atccctgacc cgggcggaca aggtgcggtt ccgttaccgg ctcgagggcg ccgagcacac
     3001 ctggaacgag gtcggcgacc
//
LOCUS       DATGWW010000431         1588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_441460, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000431 DATGWW010000000
VERSION     DATGWW010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441460"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1588)
                     /locus_tag="VK150_06220"
     CDS             complement(<1..>1588)
                     /locus_tag="VK150_06220"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HLP30938.1"
                     /translation="ALDPTVAGQANDAVLLAKGGNYSVPEDSDTYFIRFDWNPTIDHN
                     IQLRVNHSSFKGATGASTMAAYENLASDDVKTDAYVLQWNWVIGANWMNEFRISQTKD
                     DMPRSTYSKIPEVSISNVGYYGAYPFDRTYNTKRTQFQENISYVTPTFQVKAGIDYND
                     INVSEFFAGSWQGIYQFSSLANFRAGNWSYYRQNFGLNSPVKDAGLFDTSYKQMAAFI
                     QTDWRLTDTFKLGVGVRWDRQKNPDFPILDMSNRLASPMPVTGKIPTDSQFSPRVSFT
                     WTPAFDQGKTVVRGSVGRYVSTTPAVFLYQAFAANGIRTGSKDFQPGEAATYGIPRGA
                     TFNAANPYWISAMPTGVTLTGFNIWSFSPDFKNPYTDRVNIGAERPFFGDLVLGLSAT
                     YAKAKQLERTADLNLGNPTPNASGRLIYPSTISGTGAYTAVRPNTAYGTMGLYLSDAT
                     SQYHAYTASMKYHKDGSAFDAQLYYTYAINKDSDSNERNYSGIGIQDQGNLGAQWGYA
                     DTDRRQVLTGYFSFLDKEVTG"
BASE COUNT          231 a          408 c          627 g          322 t
ORIGIN      
        1 gccccgtgac ttccttgtcg aggaagctga agtagccggt gaggacctgg cggcggtcgg
       61 tgtcggcgta gccccactgg gcgcccaggt tgccctggtc ctggatgccg atgcccgagt
      121 agttgcgctc gttggagtcg ctgtccttgt tgatggcgta ggtgtagtac agctgggcgt
      181 cgaaggcgct gccgtccttg tggtacttca tgctggccgt gtaggcgtgg tactggctgg
      241 tggcatcgga caggtacagg cccatggtgc cgtaggccgt gttggggcgg acggccgtgt
      301 aggcgccggt cccgctgatg gtgctggggt agatgaggcg gcccgaggcg ttcggggtgg
      361 ggttgccgag gttcaggtcc gcggtgcgct cgagctgctt ggccttggcg taggtggcgg
      421 acaggcccag cacgaggtcg ccgaagaagg gacgctcggc gccgatgttc acgcggtcag
      481 tgtaggggtt cttgaagtcc gggctgaagg accagatgtt gaacccggtg agggtcacgc
      541 cggtgggcat ggccgagatc cagtagggat tggcggcatt gaaagtggcg ccgcggggga
      601 tgccgtaggt ggcggcttcg ccgggctgga agtccttgga gcccgtgcgg atgccgttgg
      661 cggcgaaggc ctggtagagg aacacggcgg gcgtggtgct cacgtagcgg cccacgctgc
      721 cgcggaccac ggtcttgccc tggtcgaagg cgggcgtcca ggtgaaggag acgcgggggg
      781 agaactggct gtccgtgggg atcttgccgg tcacgggcat gggagaggcg agccggttgc
      841 tcatgtccag gatcgggaag tcggggttct tctggcggtc ccagcggacg ccaacgccca
      901 gcttgaaggt gtccgtcagg cgccagtcgg tctggatgaa ggcggccatc tgcttgtagc
      961 tggtgtcgaa caggccggcg tccttcacgg ggctgttgag gccaaagttc tggcggtagt
     1021 aggaccagtt gcccgcccgg aagttggcca gggagctgaa ctggtagatg ccctgccagc
     1081 tgccggcgaa gaactcggac acgttgatgt cgttgtagtc gatgccggcc ttcacctgga
     1141 aggtgggggt gacgtagctg atgttctcct ggaactgcgt gcgcttggtg ttgtaggtgc
     1201 ggtcgaaggg gtaggcgccg tagtagccga cgttgctgat gctgacctcg gggatcttcg
     1261 aataggtcga ccggggcatg tcgtccttgg tctggctgat ccggaactcg ttcatccagt
     1321 tcgcgccgat cacccagttc cactgcagga cgtaggcgtc ggtcttcacg tcgtccgagg
     1381 ccaggttctc ataggcagcc atggtgctgg cgccggtggc gcccttgaag ctggagtggt
     1441 tcacccgcag ctggatgttg tggtcgatgg tggggttcca gtcgaagcgg atgaagtagg
     1501 tgtcggagtc ctcgggaacc gagtagttgc cgcccttggc gaggagcacg gcatcgttgg
     1561 cctggccggc gacggtgggg tcgagggc
//
LOCUS       DATGWW010000432         1528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_441543, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000432 DATGWW010000000
VERSION     DATGWW010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441543"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(393..1151)
                     /locus_tag="VK150_06225"
     CDS             complement(393..1151)
                     /locus_tag="VK150_06225"
                     /inference="COORDINATES: protein motif:HMM:NF024778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HLP30939.1"
                     /translation="MLEQWLNHPHAAPWLIVMWVAGLLGSLGHCAGMCGPIVAAFGLS
                     QAKHGGRTWTRHLRFQLGRITTYAILGGIIGFLGGFARLQTVQDMHACCRPEGAALIA
                     AQAWPWQVWVKLGVGALMLLMGLVMLLGRRAEALMEFRLPPALQKLMGRGLALGSVPY
                     ALGLLWGLIPCGLVYMMLLRTLDGGDWKMGAAGMAAFGLGNAPLLLGLGLASTRLSQA
                     WKAALLRVGGLLVAAMGGYILWQAVMLLRIQAQG"
     gene            complement(1261..>1528)
                     /locus_tag="VK150_06230"
     CDS             complement(1261..>1528)
                     /locus_tag="VK150_06230"
                     /inference="COORDINATES: protein motif:HMM:NF025601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4342 domain-containing protein"
                     /protein_id="HLP30940.1"
                     /translation="PSESTQDRTRTEEFKVDGGKVLDTIKDLIHQGNIRRIILKNESG
                     KTLIEIPLTLGLVGAALLPVFAAVGALAAVVTRMVIVVEKADQD"
BASE COUNT          255 a          527 c          510 g          236 t
ORIGIN      
        1 atggtcaggc ccacgcccgc cagcacggcc agaagtcccg ggagcaagcc cagacctgac
       61 cgggcggaca tcttcagcgc cacgcgggtg cgggctccgt cgttggcggc cgagagggcc
      121 acgcccccca gggccgtcgt cagaagcagg atggggaacg tggccatggg atctcctttc
      181 tgtgtcatct agatgttcta atcatctaga tgacgcagaa tcggatccgc ctcaccctct
      241 gtcaacccac cccacccatt tatttcacat gtaaatttat atttatttat ataattatcg
      301 ttacgtgttg tagttttcac gtgtcccggc cgaatggggc caatcgactc ctgggcgccg
      361 tcccggcgcc ctcggtgatc aggccttccc cctcagccct gggcctggat ccgcagcagc
      421 atcaccgcct gccagaggat gtagccgccc atggcggcca ccagcaggcc gcccacgcgc
      481 agcagcgcgg ccttccacgc ctggctgagg cgcgtgctgg cgaggcccag gcccaggagc
      541 agcggcgcgt tgcccaggcc gaaggcggcc atgcccgcgg cgcccatctt ccagtcgccg
      601 ccatccaggg tgcgcagcag catcatgtag acgaggccgc aggggatcag gccccagagc
      661 aggcccagcg cgtagggcac gctgcccagc gccaggccgc ggcccatgag cttttgcagc
      721 gcgggcggca ggcggaattc catgagggcc tcggcccggc gtcccagcag catcaccagg
      781 cccatgagca gcatgagcgc cccgacgccc agcttcaccc agacctgcca gggccaggcc
      841 tgggcggcga tcagcgcggc gccctcgggc cggcaacagg cgtgcatgtc ctggacggtc
      901 tgcagccgcg cgaaccctcc gaggaatccg atgatgccgc cgaggatggc gtaggtcgtg
      961 atgcgcccca gctggaagcg caggtgccgc gtccaggtcc ggccgccgtg cttggcctgg
     1021 gagaggccga aggcggcgac gatggggccg cacatgcccg cgcagtgccc cagggaaccc
     1081 agcaggcccg cgacccacat gacgatgagc cacggcgcgg cgtggggatg gttcagccat
     1141 tgttcgagca tggcccatgg tcccagcggg cggccggagg ccgcaagcga cggcggtcac
     1201 ggatgggtgc ggcggaatgt cgcacccatc cggagggcca ggtcccgcgc aggttcagcc
     1261 ctagtcctga tccgccttct ccacgacgat caccatccgc gtgaccacgg cggccagggc
     1321 gcccaccgcc gcgaagacgg ggaggagcgc cgcgcccacc aggccgagcg tcaacgggat
     1381 ctcgatgagg gttttgccgg attcgttctt caggatgatc cgccggatgt tgccctggtg
     1441 gatcaagtcc ttgatggtgt ccagcacctt gccgccgtcg accttgaatt cctcggtgcg
     1501 ggtgcggtcc tgcgtggatt cggagggc
//
LOCUS       DATGWW010000433         1682 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_345993, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000433 DATGWW010000000
VERSION     DATGWW010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345993"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..>1682
                     /locus_tag="VK150_06235"
     CDS             20..>1682
                     /locus_tag="VK150_06235"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLP30941.1"
                     /translation="MSLTLSKRAGTNATALAEQVLAKVEAVRGNLIPRDLKVTVTRNY
                     GETAGDKSNELIEHLLIATLSVIALIMLAMGWRSAVVVGIAVPVTLALTLLITYLFGY
                     TLNRVTLFALIFSIGILVDDAIVVVENIHRHMHLPGQRKRFAQMVVEAVDEVGNPTIL
                     ATFAVIAAILPMAFVRGLMGPYMRPIPVGASLAMLFSLVIAFVVSPWASLIVFKKEAN
                     LPETDASGLHPGSPETAAPEPAHDWPHKNPEVAPDSRMTALYRKVMHALLTRASVRWA
                     FFGGVVALLLGAMSLVGFGVVKVKMLPFDNKSEFMVQLDLPAGTPKEDALAVGQDLAR
                     RLLKEPTVKDVQVYAGEAAPYTFVGMVRHSFLRQEAEMVDIQVNLVPKGDRKEQSHAI
                     VVRLRAELEKLSKAANARLKLVEIPPGPPVMDTIVAEVYGPTDAERARLSGELLTAFK
                     SVDGIVDVDSTLNATNPKVSLVLDREKAALHGVAPAHVIQTLAMAGYGHQAGAFHVLR
                     GSSQVPVVVQLAAEKRQHLDQLLQLTVPGARGMIPVSALVTVKEGV"
BASE COUNT          271 a          605 c          544 g          262 t
ORIGIN      
        1 cccaggcttc gagcccgccg tgagcctcac cctctccaag cgcgccggca ccaacgccac
       61 ggccctggcc gagcaggtgc tcgccaaggt ggaggccgtg cgcggcaacc tgatcccccg
      121 cgacctgaag gtcacggtca cccgcaacta cggcgagacc gccggcgaca agtccaacga
      181 gctgatcgag cacctgctca tcgccaccct cagcgtcatc gccctgatca tgcttgccat
      241 gggttggcgc agcgccgtgg tggtgggcat cgccgtaccg gtgaccctcg ccctcacgct
      301 gctcatcacg tatctcttcg gctacacgct gaaccgcgtg acgctcttcg cgctgatctt
      361 ctccatcggc atcctggtgg acgacgccat cgtggtggtg gagaacatcc accggcacat
      421 gcacctgccg ggccagcgca agcgcttcgc ccagatggtg gtggaggccg tggatgaagt
      481 gggcaatccc acgatcctcg ccaccttcgc cgtcatcgcg gccatccttc ccatggcctt
      541 cgtgcgcggg ctcatgggtc cctacatgcg gcccatcccc gtgggcgcca gcctcgccat
      601 gctcttcagc ctggtgatcg ccttcgtcgt gagcccctgg gccagcctca tcgtgttcaa
      661 gaaagaggcg aacctcccgg aaacggacgc ctcgggactg caccccggct cgccggaaac
      721 cgccgcgccg gaaccggccc acgactggcc ccacaagaac ccggaggtcg ctcccgacag
      781 ccgcatgacc gcgctctacc gcaaggtcat gcatgccctg ctcacccggg cctccgtgcg
      841 ctgggccttt ttcggcggcg tggtcgcgct gctgctgggc gccatgtccc tggtgggctt
      901 cggcgtagtg aaggtcaaga tgctgccctt cgacaacaag tcggagttca tggtgcagct
      961 cgacctgcct gcgggcacgc cgaaggagga cgccctggcc gtgggccagg acctcgcccg
     1021 gcgcctgctg aaggaaccca ccgtcaagga cgtgcaggtc tacgccgggg aggccgcgcc
     1081 ctacacgttc gtcggcatgg tccgccacag cttcctccgc caggaggcgg agatggtgga
     1141 catccaggtg aacctggtgc cgaagggcga ccgcaaggag cagagccatg cgatcgtcgt
     1201 gcggttgcgt gccgagctgg agaagctctc gaaggccgcc aacgcccggc tcaagctggt
     1261 ggagatcccg ccggggccgc ccgtgatgga caccatcgtg gccgaggtct acggtcccac
     1321 cgacgccgag cgggcccggc tctccggcga actcctcacc gcgttcaaga gcgtggacgg
     1381 catcgtggat gtggattcga cgctgaacgc caccaacccc aaggtgagcc tggtgctgga
     1441 ccgggagaag gcggccctcc acggcgtggc gccggcccac gtgatccaga ccctcgccat
     1501 ggccggctac ggccaccagg cgggcgcctt ccacgtgctg cgggggtcga gccaggtgcc
     1561 cgtggtggtg cagctcgccg cggaaaaacg ccagcacctg gaccagctgc tccagctcac
     1621 cgttcccggc gcccggggca tgattcccgt gagcgccctg gtgacggtga aagagggagt
     1681 cg
//
LOCUS       DATGWW010000434         4195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_441755, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000434 DATGWW010000000
VERSION     DATGWW010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4195
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441755"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..252
                     /locus_tag="VK150_06240"
     tRNA            178..252
                     /locus_tag="VK150_06240"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:210..212,aa:Val,seq:cac)
     gene            303..869
                     /gene="efp"
                     /locus_tag="VK150_06245"
     CDS             303..869
                     /gene="efp"
                     /locus_tag="VK150_06245"
                     /inference="COORDINATES: protein motif:HMM:NF001810.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HLP30942.1"
                     /translation="MPFINATQVRAGMIVNFENELCRVISTEHQTPGNLPARVVVKMK
                     RLKDGINRENRFGSADKVDKASLEQHMLEYLYEDGDHLVFMNNETYEQLEVSKEILGD
                     DLVFLEPNMQVEIEFYEGQPMSATLPPSVVLEIVETDPVMKNANATGSYKPAKLNNGI
                     SVGVPPYMEAGQKIRVNTVDRTFMERVK"
     gene            1218..1892
                     /locus_tag="VK150_06250"
     CDS             1218..1892
                     /locus_tag="VK150_06250"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HLP30943.1"
                     /translation="MPQAVLNLRRIEFLAGLPMNAAEELASIAELRRFPDGARVYTQG
                     DQVPGVYVVVKGGLKVFRTDGRGRVQVLQFLKVGDCVGEVSVFDGASIASSAESHGET
                     ECWLIPAAPLRQIVHRHPEVAEMIIQHFSAKVRHLVTLVETLSLHSVPERVAQLLLEA
                     HESNPMRSLVEFQETQEDLAQCIGASREAFSRALRLLTDLGLIQSTFPVVRILDLGKL
                     QRYAKG"
     gene            complement(1953..3086)
                     /locus_tag="VK150_06255"
     CDS             complement(1953..3086)
                     /locus_tag="VK150_06255"
                     /inference="COORDINATES: protein motif:HMM:NF013183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HLP30944.1"
                     /translation="MSCDAPDLLPLDEALRRLWEALPGPALPEVRAERDDPATDRAAM
                     DGVALRAAEGRTLRRLVGTLFAGDDPAAFRVTAGCAVRIMTGAALPPGADAIVPVEDL
                     DTEGDSVRPRVEPKPGDHVRPRGDQARAGDLLLPAGTPINAARVALLAQEGLALPAQP
                     RIKVGVASTGDELVPDPAPHQIRDSNGPMLAALARGLGADVTLRPSLPDDPAALAAAL
                     RQTGDLRILLTSGGVSMGEHDHLPGVLKDLGATILFHRIRLKPGKPMLAARLGDLLVL
                     GLPGNPVSAYLNALLFLGHALARLEGRAAPDLWRRGRLTASVKNKGDRPLLHPCRLVD
                     GHLEPLPGKGSADLVTLAKADACAWIDQGGLEAGAKTRWLSLV"
     gene            complement(3169..3612)
                     /locus_tag="VK150_06260"
     CDS             complement(3169..3612)
                     /locus_tag="VK150_06260"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HLP30945.1"
                     /translation="MLFSTATGYALRALAALPEDGTFCLAKDLSSKLELPGPYLAKIL
                     QGLVQADILESVRGPKGGFRLTRPSHRITVGEVVAALEGPDALEGCIMGFPTCGGDHP
                     CPLHDAWGAVKAQVSTSMTEATIRDLQLMDLRHQKEAEGRSARKG"
     gene            complement(3712..>4195)
                     /locus_tag="VK150_06265"
     CDS             complement(3712..>4195)
                     /locus_tag="VK150_06265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30946.1"
                     /translation="PLACVAPLILVALWADARRAVRSLAVELAAQGAFAGLAAAMLAA
                     GGAGLMDSGRTWLFVTLVGGANLAHVRRILGHAHRLDAAELRNRMWPVHGLHLLLTAG
                     SLLLLAPRGIAGQVWSAWTVLLYLRALAPYRPIPARTLGWREGGLSVLGLFILWRALA
                     "
BASE COUNT          683 a         1399 c         1512 g          601 t
ORIGIN      
        1 aaaggccgca ggcatcgccc agaagatgag gaaggcgggc gtgttcgtcg tccccatgcc
       61 cgccgggctc cgcgtgggga tctgcgccct tcccgcgggg aaggcctccc gtctggcgga
      121 tgccttcgcg gctgcgcgct agacattcct ccggaagctg gtattctaat ggaccgcggg
      181 cgtataactc agcggtagag tgctatcttc acacggtaga agtccctggt tcgaacccag
      241 gtacgcccac cactcagagc ccctgatcca ttcgggggct ttcgctttgg agcgaggcca
      301 ccatgccctt catcaacgcc acccaggttc gcgccgggat gatcgtcaac ttcgagaacg
      361 agttgtgccg ggtcatcagc accgagcacc agacccccgg caacctgccg gcccgggtgg
      421 tcgtgaagat gaagcgcctg aaggacggca tcaaccgcga gaaccgcttc ggaagcgccg
      481 acaaggtgga caaggccagc ctcgagcagc acatgctcga gtacctctac gaggacggcg
      541 accatctcgt gttcatgaac aacgagacct acgagcagct ggaagtgagc aaggagatcc
      601 tgggcgacga cctggtcttc ctcgagccca acatgcaggt cgagatcgag ttctacgagg
      661 gccagcccat gagcgcgacc ctgccgccca gcgtggttct cgagatcgtc gagaccgacc
      721 ccgtgatgaa gaacgccaac gccacgggct cgtacaagcc cgccaagctg aacaacggca
      781 tcagcgtggg cgtgccccca tacatggagg cgggacaaaa gatccgtgtg aacacggtgg
      841 accgcacgtt catggagcgg gtgaagtaga ccccgatccg tccgggcgag gaggccttgc
      901 gtatcgccat gggcgatacc aagaagatcc gtgtgaacac ggtggaccgc acgttcatgg
      961 agcgggtgaa gtagaccgcg atccgatcgg acatccggac ttctcagacg agccggaacg
     1021 tcggttgaga tcgagaccga gaacgaggcc agggccccgg tgggcaggag tcgccggggc
     1081 cttggccttt ctgaatttcc cgagtcgaaa ttccaacccc gcggtaaagt aatggtcgcc
     1141 tgccggccgg ggtcgtgatc gggatcacaa tccacgttga tttgtgcgat aacagtccta
     1201 agcgttggtg gagtctcatg cctcaagccg tcctcaacct gagaaggatc gagttcctgg
     1261 ccgggctgcc gatgaacgcc gccgaagagc tggcgagcat cgcggagctc cgccggttcc
     1321 ccgacggcgc gcgtgtctac acccagggcg accaggtgcc gggcgtgtac gtggtggtca
     1381 agggcgggct caaggtcttc cgcaccgacg gccgcggccg ggtgcaggtg ctccagttcc
     1441 tcaaggtcgg cgactgcgtg ggcgaagtgt ccgtctttga cggcgcctcc atcgccagca
     1501 gcgccgagtc ccacggcgaa accgagtgct ggctgattcc cgctgcgccc ctgcgccaga
     1561 tcgtgcatcg ccaccccgag gtggccgaga tgatcatcca gcacttctcc gccaaggttc
     1621 gccacctggt gaccctggtg gagaccctca gcctgcacag cgtgccggag cgcgtggccc
     1681 agctcctgct tgaggcccac gaatcgaatc ccatgcgttc cctggtggaa ttccaggaga
     1741 cgcaggagga cctggcccag tgcatcggcg ccagccgcga ggccttcagc cgcgccctgc
     1801 gcctgctgac ggacctcggc ctcatccaga gcaccttccc cgtggtgcgc atcctcgacc
     1861 tgggcaagct gcagcgctac gccaagggct gactgggccg ccagcctatg aagaacggcg
     1921 ccacgcggcg ccgttcttca ttcaggccgg gtctagacca gcgacagcca gcgggtcttg
     1981 gcgccggcct ccaggccgcc ctggtcgatc cacgcgcagg cgtcggcctt ggcgagggtg
     2041 acgaggtcgg cggagccctt gccgggcagt ggctccaggt gcccgtccac caggcggcaa
     2101 gggtgcagga ggggccggtc tcccttgttc ttcacggagg cggtgaggcg gccccgccgc
     2161 cagaggtccg gcgccgcgcg cccctccagg cgggccagcg cgtggccgag gaagagcagg
     2221 gcgttgaggt aggccgacac ggggttgccc ggcaggccca gcaccaggag gtcgcccagg
     2281 cgggccgcga gcatgggctt gccgggcttg aggcggatcc ggtggaagag gatggtggcg
     2341 ccgaggtcct tcagcacccc gggcaggtgg tcgtgctcgc ccatgctcac gccgccggag
     2401 gtgagcagga tgcggaggtc ccccgtctgg cgcagggccg cggccagggc ggcgggatcg
     2461 tcgggcaggc tggggcggag cgtcacgtcg gcgccgaggc cgcgggccag ggccgccagc
     2521 atggggccgt tggaatcgcg gatctggtgc ggcgcgggat cgggcaccag ttcatcgccg
     2581 gtggaggcca cgcccacctt gatgcgcggc tgcgccggca gggccaagcc ctcctgggcg
     2641 agcagggcca cccgcgcggc gttgatgggg gtgcccgccg gcagcagcag gtcgccggcc
     2701 cgggcctggt ccccgcgggg ccgcacgtgg tcgccgggtt tcggctccac ccgcggccgc
     2761 accgagtccc cctcggtgtc gaggtcctcc acgggcacga tggcatccgc gcccgggggc
     2821 agggcggcgc cggtcatgat gcgcacggca cacccggcgg tcacgcggaa ggccgccggg
     2881 tcgtccccgg cgaagagggt gccgaccagc cggcggaggg tccggccctc cgcggccctc
     2941 agcgccacgc cgtccatggc ggcgcggtcg gtggccgggt cgtcccgttc agcgcggacc
     3001 tcgggcaggg cgggccccgg aagggcctcc cagagccgtc gcagggcttc atccaaaggc
     3061 aggagatcgg gggcgtcgca gctcatcagg tcatgatcct accccggggc cggagtctga
     3121 atggttgggg gctggccgcg attcagggtt tcagctctga aacggacctt agccctttcg
     3181 ggcgctccgg ccttcggctt ccttctggtg ccggaggtcc atgagctgca gatcgcggat
     3241 ggtggcctcg gtcatggagg tgctcacctg ggccttcacg gcgccccagg cgtcgtgcag
     3301 cgggcaggga tggtccccgc cgcaggtggg gaagcccatg atgcagccct ccagggcatc
     3361 gggcccctcc agggccgcga ccacctcgcc caccgtgatg cggtgcgagg gccgggtgag
     3421 gcggaaaccg cccttcgggc cccgcacgga ttccaggatg tccgcctgca ccaggccctg
     3481 gaggatcttg gcgaggtagg gtcccggcag ctccagtttc gaggagaggt ccttcgccag
     3541 gcagaaggtc ccatcctcgg gcagggccgc gagggcacgg agggcatagc cagtggcggt
     3601 ggagaagagc attccggaat ccccgttctg ataccagcat cgtggctgga gattccggag
     3661 tccagccggt tgtgatggat gtcagacggt ctgaggcctg gcgcgaccgc ctcaggccag
     3721 ggcccgccag aggatgaaga ggcccagcac gctcaggccg ccctcgcgcc agccgagggt
     3781 gcgggccggg atgggccggt agggggccag ggcccgcagg tacagcagca cggtccacgc
     3841 ggaccagacc tggcccgcga ttcctcgggg cgcgagaagg aggagcgacc ccgctgtcag
     3901 caggaggtgg agcccatgga cgggccacat ccggttccgg agctcggcgg cgtcgaggcg
     3961 gtgggcgtgg cccaggatgc gccgcacgtg ggccaggttg gcgccgccca ccagggtgac
     4021 gaagagccag gtccggcccg agtccatcag gccggcgcct ccggccgcca gcatggccgc
     4081 ggctaggccc gcgaaggcgc cctgggcagc cagctccacc gccagggagc gcaccgcccg
     4141 ccgcgcgtcc gcccacaggg cgaccaggat cagcggcgcc acgcaggcca ggggg
//
LOCUS       DATGWW010000435         1864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_346177, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000435 DATGWW010000000
VERSION     DATGWW010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346177"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VK150_06270"
     CDS             <1..356
                     /locus_tag="VK150_06270"
                     /inference="COORDINATES: protein motif:HMM:NF013219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HLP30947.1"
                     /translation="LGRAMNLLSLGEESAQSLGVDVRRLRRQLIVLSTVLTALATAVA
                     GIVGFVGLVVPHALRLAVGPDHRRLLPYSMLGGAAFLLACDLVTRTFPLGLRLGVVTA
                     IIGGPFFLWLLRRPR"
     gene            353..1075
                     /locus_tag="VK150_06275"
     CDS             353..1075
                     /locus_tag="VK150_06275"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLP30948.1"
                     /translation="MTAPLKAVGLSVPGRLEAVSLELGPRELVAVVGPNGAGKSTLIQ
                     ALAGLLPADGHVHWNGQPLSKISFTERARRLAWVSQEAHFEFAFPVREVVAQGRFTWG
                     DDLTGVAEVLAELDLTDLADRPVTRLSGGERHRVGLARALATRAPIQLWDEPVAQLDV
                     RHALEVLRLGRRLADGGGTVVVSLHDLRAAYRFDRVLVLDRGRLRGNGKPHEVLTADL
                     IREVFRVRATFVESLVPELPCD"
     gene            1066..>1864
                     /locus_tag="VK150_06280"
     CDS             1066..>1864
                     /locus_tag="VK150_06280"
                     /inference="COORDINATES: protein motif:HMM:NF038402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helical backbone metal receptor"
                     /protein_id="HLP30949.1"
                     /translation="MRLTCPAFGTALDLDAPPRRVISFVSSATETLVELGCAAAIVGV
                     TPYCARYVEGLRAPVVGDYLKADPDHLKALSPDLVLVTSGIQAGLGRRLAEAGLPVYA
                     LPLPASRFGILENQMILGGLMHRVAEARSLNGRMESAFAELRASLPARRPKVFIEMWC
                     GRHLRGIGGLSFIHDLLELGGGDPVPPAAAEAYPLPDLAAVAALRPDVVLLFQEPEHP
                     VDGEALLAERGWTWGPRLIHSDITRGRNLIHDGPSFLDTARWLRQALH"
BASE COUNT          206 a          717 c          657 g          284 t
ORIGIN      
        1 ccctgggccg ggccatgaac ctgctgagcc tcggcgagga gagcgcccag agcctgggcg
       61 tggacgtgcg ccgcctgcgc cgccagctca tcgtgctgtc cacggtgctg acggcgctgg
      121 ccaccgccgt ggcgggcatc gtgggcttcg tgggcctggt ggtgccccac gcgctgcgcc
      181 tggccgtcgg ccccgaccac cggcgcctgc tgccctattc catgctcggc ggcgcggcgt
      241 tcctgctggc ctgcgacctg gtgacgcgca ccttccccct gggcctgcgc ctgggcgtgg
      301 tcaccgccat catcggcggg cccttcttcc tgtggctgct ccggaggccg cgatgaccgc
      361 gcccctcaag gccgtcgggc tgtcggtgcc gggccgcctg gaggcggtgt cgctggagct
      421 cggcccgcgc gagctggtgg cggtggtggg acccaacggg gcgggcaagt ccaccctgat
      481 ccaggccctg gcggggctcc tgccggcgga tgggcacgtt cactggaatg gacagcctct
      541 gtcaaaaatc tccttcacgg aacgcgcccg gcgtctcgcc tgggtgagcc aggaggccca
      601 cttcgagttc gccttcccgg tgcgggaggt ggtggcccag ggccgcttca cctggggcga
      661 cgacttgacg ggcgtggcgg aggtcctcgc cgagctcgac ctcaccgact tggccgaccg
      721 ccccgtcacg cgcctctccg gcggcgagcg ccaccgggtg gggctggccc gcgccctggc
      781 cacccgcgcg cccatccagc tctgggacga gcccgtggcg cagctggacg tccggcacgc
      841 cctggaggtg ctgcgcctgg ggcgccgcct cgccgatggg ggcggcaccg tggtggtgag
      901 cctccacgac ctgcgcgcgg cctaccgctt cgaccgggtg ctcgtgctgg accgcggccg
      961 cctccgcggc aacgggaagc cccacgaggt gctcaccgcc gacctcatcc gcgaggtgtt
     1021 ccgggtgcgc gccaccttcg tggagtccct ggtgccggag ctgccgtgcg actgacctgc
     1081 cccgccttcg gcaccgcgct cgacctcgat gcgccgcccc ggcgcgtgat cagcttcgtc
     1141 tccagcgcca ccgaaaccct cgtcgagctg ggctgcgcgg cggcgatcgt cggcgtcacg
     1201 ccgtactgcg cccggtacgt ggagggcctc cgcgcgcccg tcgtgggcga ctacctgaag
     1261 gccgatcccg atcacctgaa ggcgctgtcg ccggatctcg tgctggtgac ctcgggcatc
     1321 caggcgggcc tgggccgccg cctggcggag gccggcctgc cggtctacgc cctgcccctt
     1381 cccgcgagcc gcttcggcat cctggagaac cagatgatcc ttggcggcct catgcaccgc
     1441 gtggccgagg cgcgatccct caacggccgg atggaatccg ccttcgccga gctgcgcgcc
     1501 agccttccgg cgcgccggcc caaggttttc atcgagatgt ggtgcggccg acacctgcgc
     1561 ggcatcggcg gcctctcctt catccacgac ctgctggagc tcggcggcgg cgacccggtg
     1621 ccccccgccg ccgccgaggc ctacccgctt cccgacctgg cggcggtggc cgccctgcgc
     1681 ccggacgtgg tgctgctctt ccaggagccc gagcacccgg tggacggcga ggccctcctg
     1741 gcggaacgcg gctggacctg gggaccgcgc ctgatccatt ccgacatcac cagaggacgc
     1801 aacctcatcc acgacgggcc cagcttcctg gatacggcac gctggctgcg ccaggccctg
     1861 cacc
//
LOCUS       DATGWW010000436         1715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_113209, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000436 DATGWW010000000
VERSION     DATGWW010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113209"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..1031
                     /locus_tag="VK150_06285"
     CDS             165..1031
                     /locus_tag="VK150_06285"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HLP30950.1"
                     /translation="MIKSMTAFARQESHGEAGHLAVELRSVNHRYLESSLRLPEELRP
                     LEPQIRDRLAAGLSRGKIDCNIRFQPAVTGAAQLSLNKELASTLAHLSREVDAFLYDA
                     APASSMEILRWPGVLQAPAADVEKLQAEALALVDRAVAELNATRAREGEKLKALLEQR
                     LDAMQAQIPLVLARLPEVMGRYRQRLADRLAELKGELDPQRLEQEIVVFATRIDVAEE
                     LDRLETHIIEVRRVLKQDQPVGRRLDFLMQELNREANTLGSKSADTETTKAAVELKVL
                     IEQMREQVQNIE"
     gene            1037..1672
                     /gene="gmk"
                     /locus_tag="VK150_06290"
     CDS             1037..1672
                     /gene="gmk"
                     /locus_tag="VK150_06290"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR03263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HLP30951.1"
                     /translation="MSYTASKSPRGTLFIISAPSGAGKTSLVKALIASNENLVVSTSH
                     TTRKMRPGEENGRDYHFTDVPSFQAMVAENAFLEHAKVFDNYYGTSRAGVTERLNTGV
                     DVILEIDWQGARQVRAALPEARSIFILPPSRGELEVRLRGRGQDSDEIIARRMRDAVT
                     EMEHYGEYDYLVINDRFDVALQELQAILLTHRLRREPQTARYAALIKELVG"
BASE COUNT          311 a          633 c          527 g          244 t
ORIGIN      
        1 aatgcgggca gttagcttag catagggtcc gcccttatcg ggcgaggacc gggccagcat
       61 gccagccggg gccgcccggc gctgttcgcc aatgcccaat ttggggttac catggcggcc
      121 ccttttgagg tgccggcggg acctgccgtc attccggaga gcccatgatc aaaagcatga
      181 ccgcgtttgc ccgccaggag tcccacggcg aggccggcca tctggccgtg gagctgcgct
      241 cggtcaacca ccggtatctg gagagctccc tgcgcctccc cgaggagctg cgccccctgg
      301 agccccagat ccgcgaccgc ctggccgccg gcctctcccg cggcaaaatc gactgcaaca
      361 tccgtttcca gccggccgtg accggcgccg cccagctcag ccttaataag gagctggcct
      421 ccaccctggc ccacctgagc cgggaggtgg acgcgttcct ctatgatgcc gcgccggcca
      481 gttccatgga gatcctgcgc tggccggggg tgcttcaggc ccccgccgcc gacgtggaaa
      541 agctccaggc cgaggccctt gccctggtgg atcgggccgt ggccgaactg aacgcgaccc
      601 gcgcccgcga gggcgagaag ctcaaggccc tgctggaaca gcgcctcgat gccatgcagg
      661 cccagatccc cctggtgctg gcccgcctcc ccgaggtcat gggccgctac cgccagcggc
      721 tggccgaccg cctggccgag ctcaagggcg agctggaccc ccagcgcctg gagcaggaga
      781 tcgtcgtttt cgccacccgc atcgacgtgg cggaggagct ggatcgcctg gagacccaca
      841 tcatcgaggt gcgccgggtc ctgaagcagg accagcccgt gggccgccgc ctcgacttcc
      901 tcatgcagga gctgaaccgg gaggccaaca ccctgggctc caagtcggcg gacacggaga
      961 ccaccaaggc cgccgtggaa ttgaaggtcc tcatcgaaca gatgcgggaa caggtccaga
     1021 acatcgagta aggcccatga gctataccgc ttccaagtcg ccccgcggca ccctcttcat
     1081 catctcggcc ccctccggcg ccggaaaaac cagcctcgtg aaggcgctca tcgcctccaa
     1141 cgagaacctg gtggtctcca cctcccacac cacgcgcaag atgcgcccgg gggaggagaa
     1201 cggccgcgat taccacttca ccgatgtccc cagcttccag gccatggtgg cggaaaacgc
     1261 cttcctggaa cacgcgaagg tcttcgacaa ctactacggc acctcccgcg ccggcgtcac
     1321 cgagcggctc aacaccgggg tcgacgtgat cctggagatc gattggcagg gtgcccgcca
     1381 ggtccgcgcc gccctgcccg aggcccgctc catcttcatc ctccccccct cccggggcga
     1441 actggaggtg cgcctgcggg gccgcggcca ggacagcgac gagatcatcg cccgccgcat
     1501 gcgggatgcc gtcaccgaaa tggagcacta cggcgagtac gactacctgg tcatcaacga
     1561 ccgcttcgac gtggccctcc aggagctcca ggccatcctc ctgacccacc gcctccgccg
     1621 cgaaccccaa accgcccgct acgccgccct gataaaggaa ctggtgggct aagagctctc
     1681 ccagagggga aaacggccca acacagagcc acaga
//
LOCUS       DATGWW010000437         2734 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_442162, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000437 DATGWW010000000
VERSION     DATGWW010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2734
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442162"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(130..1956)
                     /gene="typA"
                     /locus_tag="VK150_06295"
     CDS             complement(130..1956)
                     /gene="typA"
                     /locus_tag="VK150_06295"
                     /inference="COORDINATES: protein motif:HMM:TIGR01394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HLP30952.1"
                     /translation="MTPLEKIRNLAIIAHVDHGKTTLVDALFKGAHMFRDNQRVQERA
                     MDSNDQERERGITILAKTTSLHWGGYRFNIVDTPGHADFGGEVERVLSMVDSVLLVVD
                     AFDGPMPQTKFVTRKALALGLRPIVVINKVDRPGARPVWAQDQVFELLIELGATEEQL
                     DFPCVFASAKQGYAMLDMNDASDNLDPLFDSIVKNCPHPTGSPDAPLQMLVTLMDWSD
                     FVGQIGIGRIVNGRIHVGDQVGLVKRDGTVQQQKITQLYGFEGLTRVNLTEASAGEIV
                     AIAGIADIRVGETIADATNPRALEYVDIDEPTISMMFMVNAGPFAGQDGKHVQSRRIR
                     ERLQKELQHNVALRVEDTDSPDSFKVSGRGELHLSVLIETMRREGFELCVSRPEVILH
                     TDPETGEKLEPYEDVTIDIPEAYMGVTMEHMGNRKAEMQDMGNEGGRLRLHFKIPSRG
                     LIGFRSEFMTDTRGEGILHSLFSHYGPYKGELPGRKNGVLISMEQCESVGFALMNLEE
                     RGVIFIHPQTKCYEGMIVGEHARENDLVVNVAKGKKLSNMRASGSDEATRLTPPREHT
                     LEQALEYIEADELVEVTPNFIRMRKRVLDTNERKKSEKRSEA"
     gene            2102..>2734
                     /locus_tag="VK150_06300"
     CDS             2102..>2734
                     /locus_tag="VK150_06300"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HLP30953.1"
                     /translation="MHINELLTVVCEQGASDLHLKVGNHPIARIRGKLTPMTQFKRLV
                     QEDTIAMAYAIMASDKQKGKFKENLDLDIAYSVPSLGRFRCNIFNQRGTVGLVLRVIP
                     RKIYTIDDLMLPKVLKTICQEQRGLVLVTGTTGSGKSTTLAAMIDLINATRTEHILTI
                     EDPIEYLHRDNLSIVNQREVEADCRTFSSALRAALRQDPDVILVGEMRDLE"
BASE COUNT          445 a          884 c          910 g          495 t
ORIGIN      
        1 cccaggcccg tgagcagggc cagccccagc gacgcggccc cgcccggccc gagcttctgc
       61 cagaaggtgg ctcggggcgg ggcgtggtag ggctgggcca tggggaatcc cggaagggtt
      121 ccggagatct tacgcctccg agcgcttctc ggactttttc cgctcgttgg tgtccagcac
      181 gcgcttgcgc atgcggatga agttcggggt gacttccacc agctcgtcgg cctcgatgta
      241 ctccagggcc tgctccaggg tgtgctcccg gggcggggtg aggcgcgtgg cctcgtcgct
      301 gccgctggcg cgcatgttgg acagcttctt gcccttggcc acgttcacca ccaggtcgtt
      361 ctcgcgggcg tgctcgccca cgatcatgcc ctcgtagcac ttggtctggg ggtggatgaa
      421 gatgacgccg cgttcttcca gattcatcag cgcgaagccc acggactcac actgctccat
      481 gctgatgagc acgccattct tgcggccagg cagctcgccc ttgtaggggc cgtagtggct
      541 gaagaggctg tggaggatgc cctcgccgcg ggtgtcggtc atgaactcgc tgcggaaccc
      601 gatgaggccc cggctgggga tcttgaagtg cagacgcagg cggccgcctt cattgcccat
      661 gtcctgcatc tcggccttgc ggttgcccat gtgctccatg gtgacgccca tgtaggcctc
      721 gggaatgtcg atggtgacat cctcgtaggg ctcgagcttc tcgccggtct cgggatcggt
      781 gtggaggatc acctccgggc ggctcacgca gagctcgaag ccttcgcggc gcatggtctc
      841 gatgagcacc gagaggtgca gctcgccgcg gccgctcacc ttgaacgagt cggggctgtc
      901 cgtgtcctcc acgcgcagcg ccacgttgtg ctggagctcc ttctgcaggc gctcgcggat
      961 gcggcggctc tgcacgtgct tgccgtcctg gccggcgaag gggccggcgt tcaccatgaa
     1021 catcatcgag atggtgggct catcaatgtc aacgtattcc agggcacggg ggttggtggc
     1081 gtcggcaatg gtctcgccca cgcggatgtc ggcgatgccc gcgatggcga cgatctcgcc
     1141 ggcgctggcc tccgtgaggt tgacgcgggt caggccctcg aagccgtaga gctgggtgat
     1201 cttctgctgc tgcaccgtgc cgtcgcgctt cacgaggccc acctggtcgc ccacgtggat
     1261 gcggccgttg acgatgcggc cgatgccgat ttggcccacg aagtcgctcc agtccatgag
     1321 ggtgacgagc atctgcaggg gtgcgtcggg gctgcccgtg ggatgggggc agttcttgac
     1381 gatggaatcg aacaggggat ccaggttgtc gctggcgtca ttcatgtcca gcatggcgta
     1441 gccctgcttg gcgctggcga agacacaggg gaagtccagc tgctcctcgg tggcgcccag
     1501 ctcgatgagc agctcgaaga cctggtcctg ggcccagacc ggacgggcgc ccgggcggtc
     1561 caccttgttg atgacgacga tgggccgcag gcccagcgcg agggccttgc gggtgacgaa
     1621 cttggtctgg ggcatgggac cgtcgaaggc gtccaccacc agcagcacgg aatcgaccat
     1681 gctcagcacg cgctccacct caccgccgaa atcggcatgt ccgggggtgt cgacgatgtt
     1741 gaaccggtag ccgccccagt gcagggaggt ggtcttggcc aggatggtga tgccgcgctc
     1801 ccgctcctgg tcattgctgt ccatggcccg ttcctggacc cgctggttgt cgcggaacat
     1861 gtgggcgccc ttgaacaggg catccacgag ggtggtcttc ccgtggtcga cgtgggcaat
     1921 gatggcgagg ttgcggatct tctcgagcgg ggtcatcggc attcctggtg aggcccgggc
     1981 aaaggccggg cagaaccctc gattttacca gagcggacgg tgagttccga gaactaatcg
     2041 caccctcttc cattgcgagc ccaggggact aagataagcg gaccctcccc gggagaagcc
     2101 catgcatatc aacgaactgc tcaccgtggt ctgcgagcag ggcgccagcg acctccacct
     2161 gaaggtcggc aaccatccca tcgcccgcat tcggggcaag ctcaccccca tgacccagtt
     2221 caagcggctg gtgcaagagg acaccatcgc catggcctac gcgatcatgg ccagcgacaa
     2281 gcagaaggga aagttcaagg agaatctcga cctcgacatc gcctactcgg tgccgagcct
     2341 gggccgcttc cgctgcaaca tcttcaacca gcggggcacg gtgggcctgg tgctgcgcgt
     2401 gatcccccgg aagatctaca ccatcgacga cctcatgctc cccaaggtgc tcaagaccat
     2461 ctgccaggag cagcgcggtc tggtgctggt gacgggcacc acgggctcgg gcaagtccac
     2521 gaccctggcc gccatgatcg acctcatcaa cgccacccgc accgagcaca tcctcaccat
     2581 cgaggatccc atcgagtacc tgcaccggga caacctcagc atcgtgaacc agcgcgaggt
     2641 cgaggccgac tgccgcacct tctcctcggc cctgcgcgcg gccctgcgcc aggaccccga
     2701 cgtcatcctc gtgggcgaga tgcgcgacct cgag
//
LOCUS       DATGWW010000438         1829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_442195, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000438 DATGWW010000000
VERSION     DATGWW010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442195"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1656)
                     /locus_tag="VK150_06305"
     CDS             complement(<1..1656)
                     /locus_tag="VK150_06305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HLP30954.1"
                     /translation="MRFELWQLFVAGVSYLGVLFLVAYAAEREWLPRALVRHPLVYAL
                     SLGVYATSWSYYGSVGFAQHSGYNFLTIYLGVTLAFLLAPVLLRPILRLVREYQLTSL
                     ADLFAFRYRSQTAGVLVTLFMLAGTLPYIALQVRAVTESLQVLTGETTPGPIALGFCL
                     TITVFAVLFGARHISAREKHEGLVVAIAFESVVKLTALLFVGLFAVFGIFGGMEGMDA
                     WLKLHPAALEALYRPVNEGPWFALLLLAFAAAFLLPRQFHMTFAENMNPRALGTAQWA
                     FPLFLLLLNLAIPPILWAGMQQTPEIAPDYYVLGVTLESGSSLLSVLTFIGGVSAASA
                     MIIVESIALSAMCMNHLLLPASFPPRVTEDIDVYSWLLWGRRVLIGLIILLGYGFYLL
                     LEHNQGLVSIGLISFVAVAQFLPGIVGVLFWKRASRAGFIAGLLAGGGVWAFALLVPL
                     LQRAGVLHVPFDPIALLGGTAEQPWGASTFWSLTANTLAFAIFSLLFEPDADEQEAAH
                     ACCKESDTPPTGVLVADSPAKIREQLARVTGSEMAELELQRALD"
BASE COUNT          369 a          557 c          685 g          218 t
ORIGIN      
        1 gtcgagggca cgctgcaatt cgagctccgc catctcggag ccggtgaccc gcgccagttg
       61 ttcgcggatc ttggcgggcg agtcggccac cagcacgccg gtgggggggg tatccgactc
      121 cttgcagcag gcatgggcgg cctcctgctc gtcggcgtcg ggctcgaaca gcagggagaa
      181 gatggcgaag gccagcgtgt tggcggtcag ggaccagaag gtcgaggcgc cccacggctg
      241 ctccgcggtg ccgccgagca gggcgatggg atcgaagggg acgtggagca cgccggcgcg
      301 ctgcagcagg ggcaccagca gggcgaaggc ccagacgccg ccgccggcca ggaggcccgc
      361 gatgaagccg gcgcggctgg cccgtttcca gaagagcacg ccgacgatgc cgggcaggaa
      421 ttgcgccacg gccacgaagg agatgaggcc gatggagacg aggccctggt tgtgttccag
      481 cagcaggtag aagccgtagc ccagcaggat gatgagcccg atcagcacgc gccgccccca
      541 cagcagccag gagtagacgt cgatgtcctc ggtgacgcgc ggggggaagc tggcggggag
      601 cagcaggtgg ttcatgcaca tggccgagag ggcgatgctc tccacgatga tcatggcgct
      661 ggcggccgag acgccgccga tgaaggtgag caccgagagc agcgacgaac cgctctccag
      721 cgtcaccccc agcacgtagt agtccggcgc gatctcgggg gtctgctgca tgccggccca
      781 gaggatgggc ggaatcgcca ggttcagcag cagcaggaac aggggaaagg cccactgggc
      841 ggtgccgagg gcgcgcggat tcatgttctc cgcgaaggtc atgtggaact ggcgcggcag
      901 caggaaggcc gccgcgaagg cgagcagcag cagggcgaac cagggaccct cgttgacggg
      961 acggtagagc gcctccagcg cggcggggtg gagcttcagc caggcgtcca tgccctccat
     1021 gccgccgaag atgccgaaga cggcgaacag gcccacaaac agcagcgccg tgagcttcac
     1081 caccgactcg aaggcgatgg cgaccaccag cccttcatgc ttctcccggg ccgagatgtg
     1141 gcgggcgccg aacagcaccg cgaagacggt gatggtgagg cagaaaccga gcgcgatggg
     1201 gccgggggtg gtctccccgg tgagcacctg gagggactcg gtgactgcgc gtacctgcaa
     1261 cgcgatatag ggcagggtgc cggccagcat gaacagggtg acgagcacgc cggcggtctg
     1321 gctgcgatag cggaaggcaa agaggtcggc gagggaggtg agctggtatt cccggaccag
     1381 ccgcaggatc ggccggagca gcaccggcgc cagcaggaag gcgagggtga cgccgagata
     1441 gatggtgagg aagttgtagc ccgagtgctg ggcgaaaccc acgctgccgt agtaactcca
     1501 tgaagtggcg tagaccccga gcgagagggc gtagaccagg gggtggcgca ccagggcgcg
     1561 cgggagccac tcccgctccg ccgcataagc gaccaggaac agcaccccca gataggagac
     1621 gccggcaacg aagagttgcc agagctcaaa cctcatggtc gtgacggccc gggagccgga
     1681 cggcaagaag gatgatgccg ccccagatca gatagggggt gtaccagggc agggccggcg
     1741 tggcccagaa cgccttcgag cgcctctcgg acgaaaaccc ccgcctcgcc ctcaagattc
     1801 tctggcgcat cagccaactc ctgagccat
//
LOCUS       DATGWW010000439         1533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_80017, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000439 DATGWW010000000
VERSION     DATGWW010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80017"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VK150_06310"
     CDS             complement(<1..295)
                     /locus_tag="VK150_06310"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HLP30955.1"
                     /translation="MSGIFHYLDHNATTPVHPEVAEAMARLLVSRPAGAVPAFGNPSS
                     QHAAGREARRLMEDAREAVAALVGADPGEILFTSGGTEANNLALQGACAAAATE"
     gene            complement(310..>1533)
                     /gene="metW"
                     /locus_tag="VK150_06315"
     CDS             complement(310..>1533)
                     /gene="metW"
                     /locus_tag="VK150_06315"
                     /inference="COORDINATES: protein motif:HMM:TIGR02081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HLP30956.1"
                     /translation="RGLAYARMIGHLTYLSALSMHQKFGRNQRTGHDEDRFETGFEVE
                     SYLAHQGEAFVRRFDANSYLHITWAMDHFDLFARYGSLEKAFAESKAEFLLVALSSDW
                     LFFPEQTRELGSVLLGLKKVVSLVELDSPYGHDAFLLEVAHLSRVLNGFLEKPASSPK
                     RVSGPIQAMASAPANGPGGVAQAFPAEAAQATAQAASAAIPRPSAFPRSAAGDLSAIG
                     TLIEPGSHILDIGCGDGALIDNLYRSHGVTGIGIDFDLGHVVECLRKNVPVLQSDADK
                     GLSLVGGRLFDYAVLNRTLQEVKRPQLVLREMLRVARKGIVAFPNFAHIGNRLALLGT
                     GVMPVSEALPHTWHDTPNIHLFSLDDFRILCRQEGIRIEKIRYAGAALLSRIFLGLGR
                     PNLGAEFVIARIAKV"
BASE COUNT          255 a          481 c          564 g          233 t
ORIGIN      
        1 cttccgtcgc cgcggcggcg caggcgccct ggagggccag gttgttggcc tcggtgccgc
       61 cgctggtgaa caggatctcc cccgggtccg cccccacgag tgccgcgaca gcctcccgcg
      121 cgtcctccat gagacgccgc gcctcccgcc ccgcggcgtg ctgactggag gggttgccga
      181 aggcggggac cgcccctgcc ggacgcgaga cgagcagccg cgccatggct tcggccacct
      241 ccggatgcac cggcgttgtg gcgttgtgat cgaggtaatg gaagattccg gacatgggga
      301 tgccccggat cagaccttgg cgatacgggc gatgacgaac tccgcgccca ggttgggacg
      361 gcccaggccg aggaagatcc gcgacagcag ggccgcgccg gcgtagcgga tcttttcgat
      421 gcggatgccc tcctggcggc agaggatgcg gaagtcgtcc aggctgaaca ggtggatgtt
      481 gggcgtgtcg tgccaggtat gcggcagggc ctcggacacc ggcatcaccc cggtgccgag
      541 cagggcgagg cgattcccga tatgggcgaa gttggggaag gcgacgatgc ccttgcgggc
      601 cacccgcagc atctcccgca acaccagttg gggccgcttc acctcctgca gggtgcggtt
      661 gagcacggca tagtcgaaca ggcgcccgcc caccagggac agacccttgt ccgcgtcgct
      721 ctgcaggacg ggaacgttct tgcgcaggca ctccaccacg tggcccaggt cgaagtcgat
      781 gccgatgccg gtgaccccgt gggaccggta gaggttgtcg atgagggcgc cgtcgccgca
      841 accgatgtcg aggatgtggc tgccgggctc gatgagggtg ccgatagcgg acagatcgcc
      901 ggccgcggac cgtggaaagg ccgagggtcg cggaatggcc gcggaagcgg cctgggccgt
      961 cgcctgggcg gcttccgcgg ggaaagcctg ggccactcca cccggcccat tcgccggggc
     1021 ggaagccatg gcttggatag ggcccgatac cctcttggga ctggaggcgg gcttttcgag
     1081 aaagccgttg aggaccctgc tcaggtgagc gacctccagc aggaaggcgt cgtggccgta
     1141 gggcgagtcg agctcaacga gggagaccac cttcttaagg cccagaagga cgcttcccag
     1201 ctcgcgggtc tgctccggga agaagagcca gtcggaggag agggccacca gcaggaactc
     1261 cgccttggac tcggcgaagg ccttttccag ggagccgtag cgggcgaaca ggtcgaaatg
     1321 gtccatggcc caggtgatgt gcagatagga gttggcgtcg aagcgcctca cgaaggcctc
     1381 gccctggtgg gccaggtagc tctccacctc gaacccggtc tcgaaacggt cctcgtcgtg
     1441 gccggtgcgc tggttgcgcc cgaacttctg gtgcatggac agggccgaca ggtaggtgag
     1501 gtggcctatc atgcgggcgt aagccaggcc ccg
//
LOCUS       DATGWW010000440         2330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_258598, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000440 DATGWW010000000
VERSION     DATGWW010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2330
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258598"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VK150_06320"
     CDS             complement(<1..293)
                     /locus_tag="VK150_06320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30957.1"
                     /translation="MRALRMALVGLVLLLGRSVQARPEEPWPDPGPPASRDLFPLNLI
                     PLTYRPLGADTVGHGRWRVSFQVIRSNTFEFSDLIKDRLGRDSSGRYTVDQAGA"
     gene            380..1048
                     /locus_tag="VK150_06325"
     CDS             380..1048
                     /locus_tag="VK150_06325"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLP30958.1"
                     /translation="MEPKAPDTRTSLLQAALVCFADHGFDGTSMRMIADAAGRPLSLL
                     SHYFRNKEGLYLEVFKHIFETSGHRAAGPAQAANLDPRDPQAAVRLLREQIHFMYGQA
                     APDAAMARPFQEHRARLWLQEFRTPRPSLHPIIQEYLGPTARLIRACIQVLRPELNPS
                     QVAFIGTTIMGQVAGHGTMVGLNRVLWGTHPAFGSHFQEAELLVDFCLQGLRAEGPAL
                     PREG"
     gene            1311..1970
                     /locus_tag="VK150_06330"
     CDS             1311..1970
                     /locus_tag="VK150_06330"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HLP30959.1"
                     /translation="MPDSQPSAATSHQETRGCLVEAALTCFAKYGYDATSIRLIATAA
                     GKNSSLISYYFKGKEGLYREVFRHLLDRFFPAPGVPPSQDGTQAAGGTRARLRAILGR
                     ILSDVDAHFRSVDPLKDAATRLFLAEVHAPREEVKDLLRARLEPSAQELRACIRAIRP
                     DLPEADVDFWGITIQGTCVSHALRSEINALVWTSADPELPLDVMADRLTTFVHTGLTS
                     V"
     gene            2032..>2330
                     /locus_tag="VK150_06335"
     CDS             2032..>2330
                     /locus_tag="VK150_06335"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HLP30960.1"
                     /translation="MRTPTRGELLSIAVVLVAGGLTVGCGKKDQAKATPEVSVVTLQP
                     ERVAITFELPGRTSAFLMAEVHPQVNGIVQKRLFTEGSDVKEGELLYQIDPRPYQA"
BASE COUNT          404 a          865 c          698 g          363 t
ORIGIN      
        1 gctcccgcct ggtccacggt gtagcgtccc gagctgtccc ggccgaggcg atccttgatc
       61 aggtccgaga actcgaaggt gttcgagcgg attacctgga acgacacgcg ccaccgtccg
      121 tgccccacgg tgtccgcgcc cagaggccgg taggtcagcg ggatcaggtt caggggaaag
      181 aggtcccggc tggcgggcgg gccgggatcg ggccagggtt cctcaggacg cgcctgaacg
      241 gagcgaccca ggagcaggac gaggccgacc agggccatcc gcagcgccct catggccacc
      301 accgcgcagg agcacccgcc cgcgggccgc caatcgcggc aggtgcgggg atccaggtgt
      361 tgctaccctg ggctacgcga tggaacccaa ggcccccgac acccgcacct ccctgctcca
      421 ggccgccctg gtgtgcttcg ccgaccacgg attcgacggc accagcatgc ggatgatcgc
      481 ggacgccgcg gggcgccccc tctcgctgct ctcccactac ttccggaaca aggagggcct
      541 gtacctcgag gtgttcaagc acatcttcga gacctccggc caccgggccg ccggccccgc
      601 ccaggccgcg aacctggatc cccgcgatcc ccaggccgcc gttcgcctgc tgcgggagca
      661 gatccacttc atgtacgggc aagccgcgcc ggacgcggcg atggccaggc ccttccagga
      721 acaccgggcc cggctctggc tgcaggaatt ccgcacgccc cgcccgagcc tccatccgat
      781 catccaggag tacctcggcc ccaccgcccg gttgatccgc gcgtgcatcc aggtgcttcg
      841 ccccgagctg aacccgagcc aggtggcctt catcggcacg accatcatgg gccaggtggc
      901 cggccacggc acgatggtcg gcctcaaccg ggtgctgtgg ggaacacacc cagccttcgg
      961 cagccacttc caggaagcgg aactgctggt ggacttctgc ctccagggtc tgcgggccga
     1021 gggcccggcc ctcccccggg aaggctaggc ccccgaccgc accgaatcct cctcgccagg
     1081 ggcggaaggt cgacgcggga ggtgaaacga aaggcggagg catggcacga ttcaagttgg
     1141 tcaattgacc tattatttaa tacagggagg ttcgccattc gcacccccta gtcttggaat
     1201 ttttataaac agtgtcaata cttgtgaaat tcaaacccat tccacccttg attgaattga
     1261 tcgattgatc taagctaggg ctaggtcaat cgaccattca aggcatccag atgcccgatt
     1321 ctcagccctc agccgcgacc agccaccagg agacccgggg gtgcctcgtg gaggcggccc
     1381 tgacctgctt cgcgaagtac ggctacgatg ccacctccat ccgcctcatc gccaccgccg
     1441 ccggcaagaa ctcctccctg atctcctact acttcaaggg caaggagggg ctctaccgcg
     1501 aggtcttccg gcacctgctc gaccgcttct tcccggcgcc gggggtcccg ccaagtcagg
     1561 acgggaccca agcggccgga ggcacccgcg ccaggctccg cgccatcctc ggcaggatcc
     1621 tgtccgacgt ggacgcccac ttccggtcgg tggatccgct gaaggacgcc gccacgcggc
     1681 tcttcctcgc cgaagtccac gccccccggg aggaagtgaa ggacctgctc agggcccgcc
     1741 tggaaccttc cgcccaggag ctgcgtgcct gcattcgcgc catccgccct gacctcccgg
     1801 aggccgacgt ggatttctgg ggcatcacca tccagggcac ctgcgtcagc catgcgctgc
     1861 gctcggaaat caacgcgctc gtctggacct cggcggatcc agaattgccc ctcgacgtga
     1921 tggcggaccg cctcacgacc ttcgtgcaca ccggcctgac cagcgtctga cgctctctcc
     1981 cttccccacc ccatcccccc gatcttccgc acccactcaa ggagcctccc catgcgaacc
     2041 cccacccgag gcgaactgtt gtccatcgcc gtggtcctcg tggccggcgg cctcacggtc
     2101 ggctgcggca agaaagacca ggccaaggcc acgcccgaag tctccgtggt caccctgcag
     2161 cccgagcggg tcgccatcac cttcgagctc cccgggcgga cctcggcctt cctcatggcg
     2221 gaagtccatc cccaggtgaa cggcatcgtc cagaagcgcc ttttcaccga aggcagcgac
     2281 gtgaaggagg gtgagctcct ctaccagatc gacccccggc cctaccaggc
//
LOCUS       DATGWW010000441         1906 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_442430, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000441 DATGWW010000000
VERSION     DATGWW010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442430"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="VK150_06340"
     CDS             complement(<1..241)
                     /locus_tag="VK150_06340"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HLP30961.1"
                     /translation="MPSLPTLLLLMLASLLAGFVDAIVGGGGLITVPALMIALPSGTP
                     LPTLLGTNKVVACTGTTMAAGKFLRSGTLAWREMVG"
     gene            complement(346..873)
                     /gene="frr"
                     /locus_tag="VK150_06345"
     CDS             complement(346..873)
                     /gene="frr"
                     /locus_tag="VK150_06345"
                     /inference="COORDINATES: protein motif:HMM:TIGR00496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HLP30962.1"
                     /translation="MHASVEALKKEMATIRTGRANASLLDNVHVEYYGSMVPLNQMGT
                     VSVPEAGMLVVTPFDKSAIKAVETAILKSDLGINPGNDGNVIRLPIPMLTEERRRELV
                     KVLHRLGEEIKTGVRNIRRDANEDVKKLEKAKEAHISEDVAKKLLDDIQKVTDAHIKE
                     IDEAMKHKEAEIMKV"
     gene            1013..1888
                     /locus_tag="VK150_06350"
     CDS             1013..1888
                     /locus_tag="VK150_06350"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HLP30963.1"
                     /translation="MRTLRLMAPLASLVLTAAAPAPTPTAVSGEMVLTSADGFTLKGT
                     LTLPGVKGKVPVVILAHQFQADRTGWAPLAERLAARGIGTLALDLRGHGASTMKNGNP
                     VQVTPNFIASAKEVGFDQIPADLAQAAAWLRKQPGVDGRRIGLAGSSVGAFSVLLAAG
                     EVKPLAILSLSPAGTGAFGEGAREKLKGALLRGRASTLVLASTGDKDAFENAQSLKDL
                     PGVAVNLKDGEEHGFAYFKERADLMAVFFGEYLTYHHTGKTYAAAGAPKPVATPGNLI
                     NDKTLAEKKAAEASK"
BASE COUNT          286 a          679 c          622 g          319 t
ORIGIN      
        1 gcccgaccat ctcgcgccag gcgagggtgc ccgagcggag gaacttcccg gcggccatcg
       61 tggtgcccgt gcaggccacc accttgttcg tgccgagcag cgtgggcagt ggcgtgccgg
      121 aaggcagcgc aatcatgagc gccggcaccg tgatcaaccc gcccccgccg acgatggcgt
      181 cgacgaagcc cgccagcagc gacgcgagca tgaggagcag gagggtgggg aggctgggca
      241 tggattcagt ccgagggctg gtggctggag gcactgcttc tggcggcggt cctccggacc
      301 gcgccttggt catcgcacgg acgccagacc ccggaatgca ggccgtcaga ccttcatgat
      361 ctccgcttcc ttgtgcttca tggcctcgtc gatctccttg atgtgggcgt cggtcacctt
      421 ctggatgtcg tccaggagct tcttcgccac gtcctcggaa atgtgggcct ccttcgcctt
      481 ctcgagcttc ttcacgtcct cgttggcgtc gcggcggatg ttgcgcacgc cggtcttgat
      541 ctcctcgccc aggcggtgca gcaccttcac cagctcccgg cggcgctcct cggtgagcat
      601 ggggatgggc aggcggatga cgttgccgtc gttgccgggg ttgatgccca ggtccgactt
      661 caggatggcg gtctccacgg ccttgatggc gctcttgtcg aagggcgtca ccacgagcat
      721 ccccgcctcg gggacggaca ccgtgcccat ctggttcagg ggcaccatgg agccgtagta
      781 ttcgacgtgc acgttgtcga gcaggctggc gttggcgcgg cccgtccgga tcgtggccat
      841 ctccttcttc agcgcctcca cggacgcgtg catgcggcgt ttggcctcct gcaggatggc
      901 atcgggggtc tgggcggata tgggcacctc aaaagagcac gagccctctt ttatacctca
      961 catttccatg ggttccatgc gtgctagagt gggtcacctt ttcgaggtcc ccatgcgcac
     1021 gctccgcctg atggctccct tggcgtccct ggtcctgacc gccgcggccc cagctcccac
     1081 ccctaccgcc gtctccggcg agatggtcct caccagcgcc gacggcttca ccctgaaggg
     1141 cacgctcacc ctgcccgggg tgaagggcaa ggtccccgtc gtgatcctcg cccaccagtt
     1201 ccaggccgac cgcaccggct gggcgcccct ggccgagcgg ctggccgcgc gcggcatcgg
     1261 caccctggcc ctggacctgc gcggccacgg cgccagcacc atgaagaacg gcaacccggt
     1321 gcaggtgacc cccaacttca tcgcctctgc caaagaggtg ggcttcgacc agatccccgc
     1381 cgacctcgcc caggccgcgg cctggctccg caagcagccc ggggtggacg gccggcgcat
     1441 cggcctcgcc ggttccagcg tcggagcctt ttcggtgctc ctcgccgcgg gcgaggtgaa
     1501 gcccctggcc atcctgagcc tcagccccgc aggcaccggc gcctttggcg agggggcccg
     1561 cgagaagctg aagggcgccc tgctccgggg ccgcgcctcg acgctggtgc tggcctccac
     1621 cggcgacaag gacgccttcg agaacgccca gagcctgaag gacctgccgg gcgtggccgt
     1681 gaacctgaag gacggcgagg aacacggctt cgcctacttc aaggagcggg ccgacctcat
     1741 ggccgtcttc tttggcgagt atctgaccta ccaccacacg gggaagacct acgccgccgc
     1801 cggggccccc aagcccgtcg cgactcccgg caacctcatc aacgacaaga ccctggccga
     1861 aaagaaggcc gccgaagcct cgaagtgacc taagcgacac ccgggc
//
LOCUS       DATGWW010000442         1841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_113331, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000442 DATGWW010000000
VERSION     DATGWW010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113331"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1137..1460)
                     /locus_tag="VK150_06355"
     CDS             complement(1137..1460)
                     /locus_tag="VK150_06355"
                     /inference="COORDINATES: protein motif:HMM:NF012487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30964.1"
                     /translation="MAPATLILGPMGAGKTTAALRMVDAALASGRRVHILKHLKDRRY
                     ESREVAQEDVIVNAEVVTHDGVRRHAYALQDVREYFGHPLPGDLVWVEEAHFFRDVQD
                     TISAW"
     gene            complement(1641..>1841)
                     /locus_tag="VK150_06360"
     CDS             complement(1641..>1841)
                     /locus_tag="VK150_06360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30965.1"
                     /translation="SVAPPHAWAPTGGPEVAEVGKPRMQGLHGHPTSPTAEGAEIPAR
                     NRTARCDGPGPRGRAGVSGIRH"
BASE COUNT          317 a          588 c          549 g          387 t
ORIGIN      
        1 gccagcttag cctaatcctc ttatagcttc ctctcgcgtt cttctaatgc cagaagcttc
       61 gcctgcagct cctactccct ttattattgt gctgccgccg caaattgagc ctacctggcc
      121 tattccgcta tcctctcctc agcctagcgg gcttactccg ccaaggcttc ctaatattat
      181 tactattgtt gagcaagcta ttactaatat taggcctccc tatctcctta ttgcgcttgt
      241 agcgcctata cttgggccat taacgctgcc atctgggcgg ccagcgtggc gataggatcc
      301 tgcggggcgg agagatctgc ccccagggtt ggggtttggc cattggccgt tgtgctggcc
      361 tgctccaaaa atggattagg ccctgtaggc acctcagctt cggaaggtgc tccccctagg
      421 ctcatgggcc taatgacgct aattcgcccc tattcttccc cttccgacag atctgagtcg
      481 gattccgaga ctggggcctc cacctcagct tcccgccatc ccagctgcag cctgccctca
      541 accaaggcgt actacagcct gggaataggg gaggccaccg tcaggtgacc agtgggcgct
      601 gcaggctact atcgcccgca tccacccatc ctggctgggc agaagcgttg gggaggcgga
      661 tactccgcac tcgtgcccac atccactaac gggtgggtac agtggtagca ggagagatcc
      721 tccagctggt ggtggtggag gagggcaaca atcgcggcat ttacgacggt ggcgaactaa
      781 cctggtgtgg caagtcccaa ggtcgtcagg atggcgctgg aatgttccac ccagaagtct
      841 gggttgtgga ggagggcggt gggggcgctc aggacgtcca gctggtggaa gtggcggcca
      901 cagcacgttc tatacgcctc aaaccacccc acccagttac ttccaactgg agtgatcctg
      961 gcggaaacga aggcttccgg agggtccacg ccttccgcca cacactcctg gcaggtccct
     1021 accagatcta tgatggtggg ttcgatgaga aggttcttca gacgctgcac caccggagct
     1081 tcagcccctg gggccaacca gtgcaaggtg gtgcataccg tctccacccc ctgcaactac
     1141 caggcgctga tggtgtcctg gacgtcacgg aagaagtggg cctcttcaac ccacaccaga
     1201 tctccgggca ggggatgccc aaagtactcc ctgacgtcct ggagtgcgta ggcgtgtctt
     1261 ctgacgccat catgcgtcac gacctccgca ttaacgatga catcttcctg ggccacctcc
     1321 ctggattcgt accgcctatc cttaagatgc ttcagaatat ggacgcgtcg ccctgaagct
     1381 aaggcggcat ctaccatccg cagggctgcg gtggtcttcc ctgcccccat gggcccaagg
     1441 atcaaggtgg cgggcgccac gtggggaggg gcttaactgg tggtgggggg ctccagatcg
     1501 gtttctgggc ccccagggac cgggtcaggg cgcgacctag tatccctgcc ttggtcgcca
     1561 tgtgttgcgg gcgcgtctcg cggggcgccg gggggggcgc tgttgccccc tcccgctgtg
     1621 ccctccccgc agcccatctc tcaatgtctt atccccgaca cgcctgccct gccccgcgga
     1681 cccgggccgt cgcagcgggc agttctgttg cgggcgggga tctcggcacc ttccgccgtg
     1741 ggactagttg ggtggccatg cagcccctgc atccgaggct taccgacctc ggccacctct
     1801 gggccgccgg tgggggccca ggcatggggg ggggccacag a
//
LOCUS       DATGWW010000443         3076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_33258, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000443 DATGWW010000000
VERSION     DATGWW010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3076
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33258"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2481
                     /locus_tag="VK150_06365"
     CDS             <1..2481
                     /locus_tag="VK150_06365"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HLP30966.1"
                     /translation="WVKDIDLRKDEGRGGGNLWLTWAELAPGQPQIDMCYTAHRLPAA
                     EGLKAADLGEMPIAGLGSGWARIHGTFDHLVLEGTAQVESAETYGIKIPAASSDFWMD
                     LDTLRLRLSDTRIAERLDLLGQRDAPPEGALALAGQADMDFQRSTWWVDLSGRLDSQL
                     LALPGPRLQAQVDARLLGPIARPFGDLDLPEGRVRVSRGRIFFGDRSVEGLQGSLRLA
                     RGRLEGQLSMEGMARPLLDFQVRQEGPDLTGDLSLVVSPDSVRTELLARGLTEDLLED
                     LSLSATAKGRWTNGRDLAWTGSLDTLQAKFNAFELHQARPSALHGGAQGAVVDIALEG
                     GARNPVDQTAAQAASIRLSGTLPFSELAPVALQAQGSANLAHVKAIFDAMMEVDEYSL
                     LSELRVQGTSRFNLLTHGTYAEPLLDGTLSLEKGQAYLRGYQGMEDLHADVILKDRTL
                     AIAEDNPMRGTLAHGELEASGAVAWRLGGLDSYAFKASLANFQLRDVPDGLDLQGTLN
                     ATLDGTEDGGLLKGRLRADRLTYQSEVKLADLILRSALSDSGGLTGLDLDDPLDRIRL
                     DLDLDLRSPWTFDTNLLKLEGRTEGAFQVLGTLAHPVPKGIMTFQPGGRITNIFPAGD
                     MVVDRGSLSFSESRPLDPVIGLQGSVSSIPGYTVNLDIRGTLSNLAIVPSSTPSLRQD
                     EIVAILINPGNVANVGTAGASSGTTQGAITSGLASAGSGLISTLAFAPFQEQLRRTLG
                     LDRVNVAVRTTSLGTTETEVTLGKSINLLGQRSAFVVSHKKSGELSITSGQVEWRFGG
                     FILHLGATKGGSAGLNPSGEIRHTWSPK"
     gene            2539..2760
                     /locus_tag="VK150_06370"
     CDS             2539..2760
                     /locus_tag="VK150_06370"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HLP30967.1"
                     /translation="MITVKCFARYRALLGFSELQVPAAPTLGELLADPRFAGLPQDAL
                     LAVNQAFADRGVALADGDEVALMPPVSGG"
     gene            complement(2770..>3076)
                     /locus_tag="VK150_06375"
     CDS             complement(2770..>3076)
                     /locus_tag="VK150_06375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30968.1"
                     /translation="SFATAPQMATDLAWAPPVLHLRFPGNVRQTLQDFEREKASPHLL
                     AALAAVLPGLRSLDIQFDGEEAGATSERPEDRLRREPAFQDLLRLTGGEVLEIRREG"
BASE COUNT          477 a         1145 c         1011 g          443 t
ORIGIN      
        1 tgggtgaagg acatcgacct gcgcaaggac gagggccggg gcggcggcaa cctgtggctc
       61 acctgggctg agctggcccc ggggcaacct cagatcgaca tgtgctacac ggcccatcgg
      121 ctgccagcgg ccgagggcct caaggccgct gatttggggg aaatgcccat cgccggtctg
      181 ggcagcgggt gggccaggat ccacggaaca ttcgatcacc ttgttctgga aggcactgct
      241 caagtcgaat cagccgaaac gtacggaata aaaattccag cggcttcttc ggacttctgg
      301 atggacctgg acaccctgcg gctgcgcctc tcggataccc ggatcgccga acggctagac
      361 cttcttggcc agcgggatgc gcctccggag ggcgccctgg ccctcgccgg ccaggccgac
      421 atggatttcc agcggtccac ctggtgggtc gacctgagcg gccggctgga ctcgcagctg
      481 cttgccctgc ccggtccgcg cctacaggcc caggtggacg cccggctgct ggggcccatc
      541 gcccgcccct tcggcgacct agacctgccc gaaggtcgcg tccgggtgag ccgcggccgc
      601 atctttttcg gcgatcgcag cgtggagggg ctgcagggtt ccctccgcct ggcccgcggc
      661 cgcctcgaag gccagctatc catggagggc atggcccggc ccctgcttga cttccaggtg
      721 cgccaagagg gtcccgacct cacgggagac ctgagccttg tggtctcgcc cgacagcgtg
      781 cgcacggaac tcctggccag gggcctgacc gaagacctgc tcgaggacct gagcctctcg
      841 gccaccgcca agggccgctg gacgaacggc cgcgacctgg cctggaccgg ctccctggac
      901 accctccagg ccaaattcaa cgccttcgaa ctgcatcagg cccgtccttc cgcgctgcat
      961 ggcggcgcgc aaggggccgt ggtggacatc gccctcgaag gcggggcgcg caatcccgtg
     1021 gaccagaccg ccgcgcaggc tgccagcatc cgcctgtccg gcacgctccc cttctcggag
     1081 ctggccccgg tcgcgctcca ggcccagggc tcggccaacc tcgcccacgt gaaggccatc
     1141 ttcgacgcga tgatggaggt cgatgagtac agcctgctgt cggaattgcg tgtgcagggc
     1201 accagccgct tcaacctgct gacccacggc acgtacgcgg agcccctcct ggatggcacg
     1261 ctctccctgg agaagggaca ggcctacctg cgcggctacc agggcatgga ggacctccac
     1321 gcggacgtga tcctgaagga ccgcaccctc gccatcgccg aggacaaccc catgcgcggc
     1381 accctggccc acggcgagct cgaagccagc ggcgcggtgg cctggcggct cggcggcctg
     1441 gattcctatg ccttcaaggc ctccctcgcc aacttccagc tgcgggacgt gcccgatggc
     1501 ctggacctgc agggcacgct gaacgccacc ctggacggca ccgaggacgg cgggctgctc
     1561 aagggcaggc tccgggcgga ccgcctcacc taccagtccg aggtgaaact cgccgacctc
     1621 atcctgcgga gcgccctgtc cgacagcggc ggcctcaccg gcctcgacct ggacgacccc
     1681 ctggaccgca tccggctcga cctggacctg gacctgcgca gcccctggac cttcgacacc
     1741 aacctgctga agctcgaggg acgcaccgag ggcgccttcc aggtgctggg caccctggcc
     1801 cacccggtgc ccaagggcat catgaccttc cagcccggag gccgcatcac caacatcttc
     1861 cccgcaggcg acatggtggt ggaccggggc tccctgtcct tctccgaatc acggcccctc
     1921 gatcctgtca tcgggctcca gggcagcgtc agctccatcc cgggctacac cgtgaacctc
     1981 gacatccggg gcaccctcag caacctcgcc atcgtgccga gttccacgcc cagcctgcgg
     2041 caggacgaga tcgtggcgat cctgatcaac cccggcaacg tggccaacgt cggcaccgcc
     2101 ggcgcctcct cgggcaccac ccagggcgcc atcacctcgg gcctggccag cgcgggttcg
     2161 ggcctgatct cgaccctggc cttcgcgccc ttccaggagc agctgcggcg caccctgggc
     2221 ctggaccggg tgaacgtggc cgtgcgcacc accagcctgg gcaccaccga gaccgaggtg
     2281 accctcggca agagcatcaa cctgctgggc cagcgcagcg ccttcgtggt gtcccacaag
     2341 aagagcggcg agctgagcat cacctccggc caggtggagt ggcgctttgg cggcttcatc
     2401 ctgcacctgg gcgccaccaa gggcggcagc gcgggcctca acccctcggg ggagatccgc
     2461 cacacctgga gtcccaaata ggcgagtccc aaataggcgc cgcgcatcgg gcggggtagc
     2521 ctggaggcgg agacggccat gatcaccgtg aaatgcttcg cccgctaccg cgcccttctg
     2581 ggcttcagcg agctccaggt gcccgctgcg cccaccctgg gcgagctcct ggccgacccc
     2641 cggttcgcgg gcctgcccca ggatgccctc ctggcggtga accaggcctt cgccgaccgc
     2701 ggcgtcgccc tggcggacgg cgacgaggtg gccctcatgc ccccggtctc gggcggctga
     2761 agcctgacct cagccctcgc ggcggatctc cagcacctcg ccgcccgtga ggcgcagcag
     2821 gtcctggaag gcgggctcgc ggcgcagccg gtcctccggc cgctcggagg tggccccagc
     2881 ctcctccccg tcgaactgga tgtccaggga ccgcaggccc ggaagcaccg cggccagggc
     2941 cgccagcagg tgggggctgg ccttctcccg ctcgaaatcc tgcagggtct ggcgcacgtt
     3001 gcccgggaac cggagatgca gcaccggcgg cgcccaggcg aggtccgtag ccatctgggg
     3061 cgcggtggcg aagctc
//
LOCUS       DATGWW010000444         2178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_80181, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000444 DATGWW010000000
VERSION     DATGWW010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80181"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..415)
                     /locus_tag="VK150_06380"
     CDS             complement(<1..415)
                     /locus_tag="VK150_06380"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HLP30969.1"
                     /translation="MTRRERTSLLLLWFFLGLLPLLIRPLWEPDEGRYAEIAREMLAT
                     GDWLTPRLNGVLYFEKPPLQYWLSALSMKAFGLNGAAARLPLALASGLMIWAAWRLAK
                     RLGAREPLWAPFMAATGLLAFLVGQLLTLDALFSAF"
     gene            complement(435..1487)
                     /locus_tag="VK150_06385"
     CDS             complement(435..1487)
                     /locus_tag="VK150_06385"
                     /inference="COORDINATES: protein motif:HMM:NF008872.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-4-keto-pentose/UDP-xylose
                     synthase"
                     /protein_id="HLP30970.1"
                     /translation="MKVLILGVNGFIGSHLVDRIMADTDWEVYGLDLGAHKVSEHLAN
                     PRFHFVEGDVTISKEWIEYHIKKCDVVLPLVAIATPKVYVTDPLRVFELDFEENLRVV
                     RQCVKYKKRVVFPSTSEVYGMCPDEAFDEHESPLVTGPIPMNRWIYSTSKQLLDRVIW
                     AYGFQQGLKFTLFRPFNWMGPKLDSLNTAKEGSSRLVTQFSWNLFNGEPLQLVDGGTA
                     RRCFIDVADAMDGLMSVLRNEGGKADGQIFNIGNPKNDYSVREIAEMMIAIWKDHPFR
                     KERGIPEGRMVETGSGEFYGKGYQDVARRTPSIKRMQAAFGFEPKVSMKDSLKKAIDF
                     FVEEHKALEKVVETEN"
     gene            complement(1547..>2178)
                     /locus_tag="VK150_06390"
     CDS             complement(1547..>2178)
                     /locus_tag="VK150_06390"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CorA family divalent cation transporter"
                     /protein_id="HLP30971.1"
                     /translation="IITVHRREQPFFTEAARQAAEGSALRPEQLALALCAGAVKSFDE
                     PLKESEEKLDQLESALFSRKIPHMSIKQIYGLKRRCAVIKRTLGRTMAALSPLKDQAR
                     DDQGLLADVVEEADRLHTWADELLESATHLMNLEINLASQRTNEVMRVLTIFSAFFLP
                     LTFLAGVYGMNFKRMPELDHPLGYPLVWVAMAGTALGIWVWFRRKGWLK"
BASE COUNT          365 a          693 c          736 g          384 t
ORIGIN      
        1 ggaaggcgct gaagagggcg tcgagggtga gcagttggcc caccaggaag gccagcagcc
       61 cggtggccgc catgaagggc gcccacagcg gctcccgggc gcccaggcgc ttcgccagcc
      121 gccaggcggc ccagatcatc aggcccgagg ccagggccag gggtaggcgc gcggcggcgc
      181 cgttcaagcc gaaagccttc atgctgaggg cggacagcca gtactggagg ggcggcttct
      241 cgaagtagag cacgccattc agccggggcg tcagccagtc gccagtggcc agcatctccc
      301 gggcaatctc cgcgtagcgt ccctcatccg gctcccagag cgggcggatc agcaggggca
      361 gcaggccgag gaagaaccag agaagcagga gggaggtgcg ttcgcgccgc gtcatcgccc
      421 ggctccgggt agggctagtt ctcggtctcg acgaccttct ccagcgcctt gtgctcttcg
      481 acgaagaagt cgatggcctt cttcagggaa tccttcatgg acaccttggg ctcgaagccg
      541 aaggcagcct gcatgcgctt gatgctcggg gtgcggcgcg ccacgtcctg gtagcccttg
      601 ccgtagaact cgccgctgcc ggtctccacc atgcggccct cgggaatgcc gcgctccttg
      661 cggaagggat ggtccttcca gatggcgatc atcatctcgg cgatctcgcg cacgctgtag
      721 tcgttcttgg gattgccaat gttgaagatc tgcccgtcgg ccttgccgcc ctcgttgcgc
      781 agcacggaca tgagcccgtc catggcatcc gccacgtcga tgaagcagcg gcgggcggtg
      841 ccgccgtcca ccagctgcag gggctcgccg ttgaagaggt tccagctgaa ctgggtcacc
      901 aggcggctgc tgccctcctt ggcggtgttg aggctgtcga gcttgggtcc catccagttg
      961 aaggggcgga acagggtgaa cttcaggccc tgctggaagc cgtaggccca gatcacgcgg
     1021 tcgagcagct gcttgctggt gctgtagatc cagcggttca tggggatggg gccggtcacc
     1081 agcggggact cgtgctcgtc gaaggcctcg tcggggcaca tgccgtagac ttccgacgtg
     1141 ctggggaaca ccacgcgctt cttgtacttc acgcactggc ggaccacccg gaggttctcc
     1201 tcgaagtcca gctcgaagac gcgcaggggg tcggtgacgt agaccttggg ggtggcgatg
     1261 gccaccaggg gcagcaccac gtcgcacttc ttgatgtggt actcgatcca ctccttggag
     1321 atggtcacgt cgccctccac gaagtggaag cgcgggttgg ccaggtgctc ggagaccttg
     1381 tgggcgccga gatcgaggcc gtagacctcc cagtccgtgt ccgccatgat gcggtccacc
     1441 aggtgcgaac cgatgaatcc attgacaccg aggatgagga ccttcacggg gactccttcg
     1501 taaacggttc agtctagcgg atgacccgcc aggacgcagc agttcgctac ttcagccacc
     1561 ccttccggcg gaaccagacc cagatgccca gggcagtgcc ggccatggcg acccagacca
     1621 gcgggtagcc cagcgggtga tccagttcgg gcatccgctt gaaattcatg ccgtaaaccc
     1681 ccgccagaaa cgtcagcggc aggaagaagg cgctgaagat cgtgagcacg cgcatgacct
     1741 cgttggtgcg ctggctggcc aggttgatct ccaggttcat gaggtgggtg gcactttcca
     1801 gcagctcatc cgcccaggtg tgcagacggt ccgcctcttc caccacgtct gccagcaggc
     1861 cctggtcatc ccgggcctgg tccttcagcg ggctcagggc cgccatggtg cgtcccaggg
     1921 tccgcttgat gaccgcgcag cgacgtttca ggccgtagat ctgcttgatg ctcatgtgcg
     1981 ggatcttccg gctgaacagg gccgactcaa gctgatcgag cttctcctcg ctctccttca
     2041 ggggttcgtc gaaggacttc acggcccccg cgcagagggc cagggccagc tgctcgggcc
     2101 gcagggcgga tccctccgcg gcttggcgcg cggcttccgt gaagaagggc tgctcccgcc
     2161 ggtggaccgt gatgatgg
//
LOCUS       DATGWW010000445         2343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_152426, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000445 DATGWW010000000
VERSION     DATGWW010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152426"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="VK150_06395"
     CDS             complement(<1..245)
                     /locus_tag="VK150_06395"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF013640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HLP30972.1"
                     /translation="MNALPFHVVTLTHPQWEDALSCAKRLPGDAVPELRLDLFPEAEP
                     EALVDALRRRCLVSCRRASEGGRWPDDDEAGRVARLCA"
     gene            441..1775
                     /locus_tag="VK150_06400"
     CDS             441..1775
                     /locus_tag="VK150_06400"
                     /inference="COORDINATES: protein motif:HMM:NF006927.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HLP30973.1"
                     /translation="MSPALMFWFQFVLVLGAILIGIRKGGVALGLIGGLGVAVLVLCF
                     RVAPGTPPIDVMLIILAVVTASATLQVAGGLDYLVQLTERLLRAHPKYVTILAPLSTF
                     FLTVCVGTGHAVYALLPVISDVALKTRIRPERPMAISSVASQMGITASPVAAAVTTFL
                     AMAAKNGQPVGLFDIVRITLPAGIIGVLAAAAWSFNRGKELDQDPEFLERMKDPEFAK
                     ALDANVTTLGMEIPFTAKLSVGLFFAGVLTIILIAMKPGLLPLVNGKVVPMTTVVQII
                     MLAFGSFILFATKVKAPDIARSSVFIAGMIAVVSIFGIAWMSETFIKANESYLVANIK
                     SMVQVAPWTFALAMFAVSAFVKSQAATLTIMLPFGYALGLPTPLLLSLIPASYAYFFF
                     AFYPSDLAAINMDRTGTTRIGKYLLNHSFMIPGLIGVSTSTLVAYGLSKILG"
     gene            complement(1898..>2343)
                     /locus_tag="VK150_06405"
     CDS             complement(1898..>2343)
                     /locus_tag="VK150_06405"
                     /inference="COORDINATES: protein motif:HMM:NF013132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HLP30974.1"
                     /translation="LVWFAALVMMASFLNKLGMVPWFSKTMGGMVAGKGWIAAFLVLA
                     LVYFYSHYFFASNTAHVASMYAAFLGVSIVAGAPPVLAALVLAFFSNLFAGMTHYGTG
                     PAPVLFGTGYVEVGTWWRMGLLISLVNIVIWVGLGGLWWKVLGLW"
BASE COUNT          408 a          859 c          673 g          403 t
ORIGIN      
        1 gcgcagagcc gcgccacgcg cccggcctcg tcgtcatcgg gccagcgccc gccttccgag
       61 gcccgccggc aactcaccag gcagcgccgc ctcagcgcat cgaccagggc ttccggttcc
      121 gcctcaggga acaggtcgag acgaagctcc ggcaccgcgt cgccaggcag ccgcttcgcg
      181 caggacaacg catcctccca ttgcgggtgg gtgagggtga cgacatggaa gggaagggcg
      241 ttcacggcgg gccatcctga agggcccatc ctaacctgcc ccgcggagcc gcggatctcg
      301 agcaccgggg cctggggccc ggcccgggcg gacttattca actaaaaaaa ccgacggctc
      361 caagtattca ttacctactc gtctgctacg cttccagccg tcccaggttc accccgcctg
      421 gctcaaagga gaagacgacc atgtcccccg ccttgatgtt ctggttccaa ttcgtgctcg
      481 tgctgggcgc catcctcatc ggcatccgca agggcggcgt cgccctcggc ctcatcggcg
      541 gcctgggcgt ggcggtcctg gtgctctgct tccgggtggc cccgggcacc ccgcccatcg
      601 acgtcatgct catcatcctc gcggtggtga ccgcctccgc caccctgcaa gtggcaggtg
      661 gcctcgacta cctggtgcag ctcacggaac gcctgctccg ggcgcatccg aaatacgtca
      721 ccatcctggc gcccctgtcg accttcttcc tcacggtctg cgtgggcaca ggccacgcgg
      781 tctacgcatt gctgccggtc atctccgacg tggccctgaa gacccgcatc cggcctgaac
      841 gccccatggc catctcgagc gtggcctccc agatgggcat caccgccagc cccgtggccg
      901 ccgcggtcac caccttcctg gccatggccg ccaagaacgg ccagcccgtg ggtctcttcg
      961 acatcgtccg catcaccctg cccgccggca tcatcggcgt gctggccgcc gcggcctgga
     1021 gcttcaaccg gggcaaggag ctggaccagg accccgaatt cctcgagcgc atgaaggatc
     1081 ctgagttcgc caaggccctg gatgccaacg tcaccaccct cggcatggag atccccttca
     1141 cggccaagct ctccgtgggc ctcttcttcg ccggcgtgct gaccatcatc ctcatcgcca
     1201 tgaagcccgg cctgctgccc ctcgtgaacg gcaaggtcgt gcccatgacc accgtggtgc
     1261 agatcatcat gctggccttc gggtcgttca tcctcttcgc caccaaggtg aaggccccgg
     1321 acatcgcccg ctccagcgtc ttcatcgcgg gcatgatcgc cgtggtgtcg atcttcggca
     1381 tcgcctggat gagcgagacc ttcatcaagg ccaacgaaag ctacctggtg gccaacatca
     1441 agagcatggt gcaggtcgcc ccctggacct tcgccctcgc catgttcgcc gtgtccgcct
     1501 tcgtgaagag ccaggccgcg acgctcacca tcatgctgcc cttcggctac gccctgggcc
     1561 tgcccacgcc gctgctgctg agcctcatcc ccgccagcta cgcctacttc ttcttcgcct
     1621 tctaccccag cgatctcgcc gcgatcaaca tggaccgcac cggcaccacg cggatcggca
     1681 agtacctcct caaccacagc ttcatgatcc ctggcctcat cggcgtgagc acctccaccc
     1741 tggtcgccta cggtctgtcg aagatcctcg gctgaggctg taaaagaatt ttcaccacca
     1801 aggcaccaag acaccaagaa acgcaaaagg catttgtctt ttcagttctt ggtgtcttgg
     1861 ggtcttggtg gtgatcttta tgtcattccg aacagaccta ccagagcccc agcaccttcc
     1921 accagagccc gccgaggccc acccagatga cgatgttcac gaggctgatg agcagcccca
     1981 tgcgccacca ggtgcccacc tccacgtagc cggtgccgaa gagcaccggg gcggggccgg
     2041 ttccgtagtg ggtcatcccg gcgaagaggt tgctgaagaa ggccagcacc agggccgcca
     2101 gcaccggcgg ggcgccggcc acgatggaca cgcccaggaa cgccgcgtac atcgaggcca
     2161 cgtgggccgt gttgctggcg aagaagtagt ggctgtagaa gtagaccagc gccagcacca
     2221 ggaaggccgc gatccagccc ttgccggcca ccatgccgcc catggtcttg ctgaaccagg
     2281 gcaccatgcc cagcttgttg aggaagctgg ccatcatcac cagggccgcg aaccacacca
     2341 ggg
//
LOCUS       DATGWW010000446         1903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_80304, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000446 DATGWW010000000
VERSION     DATGWW010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1903
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80304"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..503)
                     /locus_tag="VK150_06410"
     CDS             complement(3..503)
                     /locus_tag="VK150_06410"
                     /inference="COORDINATES: protein motif:HMM:NF013629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HLP30975.1"
                     /translation="MRKPKIDRPEEQQRFETFLRSRQLKLTGERLDLVEEVFGQPHHF
                     DADQLHMALKQKGKAISRATVYRTLDLLVQCGLVRKSSFGDQHAHYEAVRSDEHHDHL
                     ICLNCDAIIEFYRSDLEALQEEICQGFHFKPMHHSHQIFGLCQDCQRSAMDDSALAHR
                     LSQLNT"
     gene            612..1166
                     /locus_tag="VK150_06415"
     CDS             612..1166
                     /locus_tag="VK150_06415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30976.1"
                     /translation="MAIVVIESPQLTADQKSRIGERVITALQQEGLAPGSVVVQFRPE
                     RGDIYLDGLLVQAQPSVVVPTPVVSAPRPAAPAPAPEPAAAFKTKARRSKPELEDLKG
                     LLMHSLQDRGSLSSFEAQEALDLKDCDWAPATLRRLFTELEDAKLIVKSGQKRGTRYV
                     WKGIVNAPQSTPSVKLVKAETDED"
     gene            1372..>1903
                     /locus_tag="VK150_06420"
     CDS             1372..>1903
                     /locus_tag="VK150_06420"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLP30977.1"
                     /translation="MRRRDLGSRAAHSPCHTRLMDWFIRDFDHPAYFTIYADKAKDAA
                     LEGPSLAALLDLPAGSLVLDLPCGWGRLHPYLCQRGLRVVGGDLSPLNLARHHQHFGA
                     PLARLDFRALPFRADCADGVFCAFTSWGYFATEAENLRQLTEFARVLRPGGTLLLDLA
                     GRASLEAGLAEVEGYWL"
BASE COUNT          298 a          657 c          600 g          348 t
ORIGIN      
        1 catcaggtat tgagctgact cagccggtgg gccagggccg aatcatccat cgcactgcgc
       61 tggcagtcct ggcagagacc gaaaatctgg tggctgtggt gcatgggctt gaaatggaag
      121 ccctggcaga tctcctcctg cagcgcctcc agatccgagc ggtagaactc gatgatggca
      181 tcacagttca ggcagatgag gtggtcgtgg tgctcgtcgc tgcgcaccgc ctcgtagtgc
      241 gcgtgctgat cgccgaagct gctcttccgc accaggccgc actgtaccaa caggtccagc
      301 gtgcggtaca ccgtggcgcg gctgatggcc ttgcccttct gcttgagcgc catgtgcagc
      361 tggtctgcgt cgaagtggtg cggctgaccg aacacctcct ccacgagatc gaggcgctcg
      421 cccgtcagct tcaactgccg ggagcggaga aacgtctcga accgctgctg ttcttccgga
      481 cgatcgatct ttggcttgcg catgggattc ctcgggggga agtctacatg atctgtgtcc
      541 agaatcgaat tttacaaatt cacacaatct tgggattatt atggttctgg catatacata
      601 ctggagtagg catggccata gtcgttatcg aatcccccca gctcacggca gaccagaaat
      661 cccggatcgg cgagcgcgtc atcacggccc ttcagcagga aggcctggcc cccggctctg
      721 tggtcgtgca gttccggcct gagcgcggcg acatctacct ggatggcctg ctggtccagg
      781 cacagccttc cgtcgtggtg cctaccccag tcgtgtccgc gcccaggccg gcggccccgg
      841 cgcccgcgcc cgagccggcc gccgcgttca agaccaaggc ccggcgctcc aagcccgaac
      901 tcgaggactt gaagggcctg ctcatgcaca gcctccagga ccgaggctcc ctgagcagct
      961 tcgaggccca ggaagccctg gacctgaagg actgcgactg ggcccccgcc acactgcgcc
     1021 gcctgttcac cgaactcgag gacgccaagc tcatcgtcaa gagcggccag aagcgcggca
     1081 cccgctatgt ctggaagggc atcgtgaacg ccccccagag caccccctcc gtgaaactgg
     1141 tgaaggctga gactgacgag gattgatgct ctccgggggt ttcgcgcttg cgcgcacacc
     1201 cccgggcccc cgcgctcggc ccggctgagc cgtgcctcgc tggatcctct cccgggggtt
     1261 ccctatgcca cgcatgctgg caaggatcta gggtcgcgct tgcgcgctcg cgctcggccc
     1321 ggctgggccg tgcctcactg gaagctctcc tggggacctc cctagcagcg catgcgtcgc
     1381 cgggatctgg ggtcgcgcgc cgcgcacagc ccctgccaca ctcggctcat ggactggttc
     1441 atccgggatt tcgatcatcc cgcctacttc accatctacg cggacaaggc caaggacgcg
     1501 gccctggagg ggccttccct ggctgccctg ctggatctcc cggcgggaag cctggtgctg
     1561 gacctgccct gcggctgggg gcggctccat ccctacctgt gccagcgggg cctgcgcgtc
     1621 gtgggcggtg acctgagccc cctgaacctc gcgaggcacc accagcactt cggtgccccc
     1681 ctcgcgcgcc tcgatttccg tgccctgccc tttcgagcgg actgcgccga tggtgtcttc
     1741 tgcgccttca cgagctgggg ctacttcgcc accgaggccg agaacctgcg ccagctgacc
     1801 gaattcgcgc gggtgctgcg ccccggtgga accctgctcc tcgacctggc cggccgggcc
     1861 tccctcgagg cggggctggc cgaggtggaa ggctactggc tgg
//
LOCUS       DATGWW010000447         5136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_307442, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000447 DATGWW010000000
VERSION     DATGWW010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5136
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307442"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(47..1486)
                     /gene="sufB"
                     /locus_tag="VK150_06425"
     CDS             complement(47..1486)
                     /gene="sufB"
                     /locus_tag="VK150_06425"
                     /inference="COORDINATES: protein motif:HMM:NF008773.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HLP30978.1"
                     /translation="MSSTLNVVTSQEYKYGFVTDIEADSVAPGLSEDVIRFISAKKGE
                     PDWLLEFRLKAYRHWLTMTEPEWAKVDYPRPDFQKIVYYSAPRAKAPKYASMDEVDPE
                     LKRTFEKLGVPINEQAALAGVAVDVVFDSVSVTTTYKEKLAGVGIIFCSFSEAVREHP
                     ELIKKYLGSVVPAADNFYAALNSAVFTDGSFVFIPKGVACPMDLSTYFRINNKESGQF
                     ERTLIVAEEGASVSYLEGCTAPQFDTNQLHAAVVELVALDHASIKYSTVQNWYAGDKN
                     GVGGIFNFVTKRGLCKGKASHISWTQVETGSAITWKYPSCILLGDDSVGEFYSVALTN
                     HKQQADTGTKMVHIGRNTKSTIISKGISAGDSSNSYRGLVKVQPKAEGARNFSQCDSM
                     LIGQTSSASTFPYIEVQNRSAKVEHEATTSKIGEEQLFYFQQRGIPAEDAISMIINGF
                     CKYVFRELPMEFAVEATKLLSLKLEGSVG"
     gene            complement(1556..3412)
                     /locus_tag="VK150_06430"
     CDS             complement(1556..3412)
                     /locus_tag="VK150_06430"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP30979.1"
                     /translation="MANDLPGSYCQNCLSWNPGDRETCVKCGTRLLILPGDQTWEDEP
                     DETDGGEDLEEHLLERITGLEETLRRVETYLETVSDQLGKLERSEVMLRNGLMALVQE
                     MEQNRQLDAHAFSERWEHLVEENLHLISARELFTRYRARILPIARPKSMSQLKRALLE
                     TTALLESADLPGAAQRLGQALPLDPKNYELIFTAASLHEAAQNFEEAEGLARKAVGLS
                     PRHFEAWMLLAKLLQELPDQADQAIEALHQASDLRPDDPEPRMMLAELLLDQEDHQGA
                     LEAATEAVARRKDGETLLLLGQVHLARGESAQAVPVLKEASAYLPGELHVREALAEAY
                     LLQDERAKSFTILQELLLQNPGDPHLLLMVDAENHPQLREARDGKAGTQLMLDEVEAL
                     LDEHQPEGAEVLLKRVRRKGRSQRSDWLDLRLAFMKDPEKQLKAAYDFACSDRHPRLC
                     FLALRLALEHLMEQKREPEIARALDAFLTRHPKSTGAWEAALMRLAYRLMNGQITDQD
                     LAEVRRLHAHPLPGLEPRARTLLGQYLLALKRHQEVLDLIDPLIEKDPTLINHFQLGA
                     ALAGLGEREQARALLKAGLDADPGDLNDTQAKGVKSQIRGLMKELDEAGQDS"
     gene            3485..4006
                     /locus_tag="VK150_06435"
     CDS             3485..4006
                     /locus_tag="VK150_06435"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP30980.1"
                     /translation="MSEAQDSQDKRQEAMEWVGKAYQLHMKGEVEKAIALYTKSIEIH
                     PTAEAFTFRGWARSFEKDYASAIEDCHRAIDLDPEFGNPYNDIGAYYVEQDEPDEAIP
                     WLRMALKAKRYESYCFPHFNLGRVFEAKGQLDKALDHFRHALEENPRYALAAKAVERV
                     KGKLAARDPEAIR"
     gene            4128..4976
                     /locus_tag="VK150_06440"
     CDS             4128..4976
                     /locus_tag="VK150_06440"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HLP30981.1"
                     /translation="MRGLKMSKAKVWTNLLLGCACAVGWSQGPQAIRINGTGSGITLL
                     KPMAEAYRRAHPDVRIDLGKPLGSSGAIKALLAGAVDIAISSKPLGPEDSAKGARLMA
                     YGKTPLALVAESGVPVADLTTRQLEDVLAGRLTRLPQGTPLRLVLRPEGDADTQILRA
                     FSPAMNQAMSQAQARPGMLLAVTDPEATVLISRTPGACGVSGLASVLGDGFPLKVLTF
                     NGVSPTTGALANGTYPLAKDLHVVITARTSDAALAFVDFLYSPQGRALAQAAGVWVVP
                     RTTSGH"
BASE COUNT          764 a         1685 c         1756 g          931 t
ORIGIN      
        1 cttggttttt cttggcgttt tggcgtcttg gcggtgttca ttttctttag cccacacttc
       61 cttcaagctt caacgaaagc agtttggtgg cctccacggc gaactccatg gggagctccc
      121 ggaagacgta cttgcagaag ccgttgatga tcatggagat cgcatcctct gcggggattc
      181 cccgctgctg gaagtagaag agctgctcct cgccgatctt gctggtggtg gcctcgtgct
      241 ccaccttggc gctgcggttc tgcacctcga tgtaggggaa ggtgctggcg ctgctggtct
      301 gcccgatgag catggagtcg cactggctga agttccgcgc accctcggcc ttcggctgca
      361 ccttcaccag gccgcggtaa ctgttggagc tgtcaccggc gctgatgccc ttgctgatga
      421 tggtgctctt cgtgttgcgc ccgatgtgca ccatcttggt gccggtgtcg gcctgctgct
      481 tgtggttggt gagggccacg ctgtagaact cgcccacgct gtcgtcgccc agcaggatgc
      541 agctggggta cttccaggtg atggcgctgc cggtctccac ctgggtccag ctgatgtgcg
      601 aggccttgcc tttgcacagg ccgcgcttgg tgacgaagtt gaagatgccg cccacgccgt
      661 tcttgtcgcc ggcgtaccag ttctgcacgg tgctgtattt gatggaggcg tggtcgaggg
      721 ccaccagctc caccaccgcc gcgtgcagct ggttggtgtc gaactggggg gcggtgcagc
      781 cctccaggta gctcacactg gcgccttcct cggccacgat gagggtgcgc tcgaactggc
      841 ccgattcctt gttgttgatg cggaagtagg tgctcaggtc catggggcag gcgacgccct
      901 tgggaatgaa cacgaagctg ccgtcggtga acacggcgct gttgagggcc gcgtagaagt
      961 tgtccgcggc gggcaccacg ctgcccaggt acttcttgat cagctcgggg tgttccctca
     1021 ccgcttcgct gaagctgcag aagatgatgc cgacgccggc caacttctcc ttgtaggtgg
     1081 tggtcacgct gacggagtcg aagaccacgt ccacggccac gccggccagg gccgcctgct
     1141 cgttgatggg cacgccgagc ttctcgaagg tgcgcttcag ttcagggtcc acctcatcca
     1201 tggaggcgta cttgggcgcc ttggcccgcg gagcgctgta gtagacgatc ttctggaagt
     1261 cgggccgggg atagtcgacc ttggcccact cgggctcggt catggtgagc cagtgccggt
     1321 aggccttgag acggaactcc agcagccagt cgggttcccc cttcttggcc gagatgaagc
     1381 ggatcacgtc ctcgctcagt ccgggcgcga cgctgtccgc ctcgatgtcc gtcacgaacc
     1441 cgtacttgta ttcctggctg gtgaccacgt tcaaggtgga actcatccac gcctcccgag
     1501 tcttccattc tggaatctcg actaaaattg tcaacttaat aggctgtggc cccggtcacg
     1561 agtcctggcc ggcctcgtcc agctccttca tgaggccccg gatctgggac ttcaccccct
     1621 tggcctgggt gtcgttcagg tcgccgggat cggcgtccag gccggccttg agcagggccc
     1681 gggcctgctc ccgctcgccc aggcccgcca gggcggcgcc cagctggaag tggttgatga
     1741 gggtcgggtc tttctcgatg agggggtcga tcaggtcgag cacctcctgg tggcgcttga
     1801 gggccaggag gtactggccc agcagggtcc gggcgcgggg ttccaggccg gggagggggt
     1861 gggcatggag acgccggacc tccgccaggt cctggtcggt gatctggccg ttcatgagcc
     1921 ggtaggccag gcgcatgagg gccgcctccc aggcgccggt gctcttgggg tggcgggtca
     1981 ggaaggcatc cagggcccgg gcgatctcgg gctcgcgctt ctgctccatg aggtgctcca
     2041 gcgccaggcg cagggccagg aagcagagcc gcgggtggcg gtccgagcag gcgaagtcgt
     2101 aggcggcctt cagctgcttc tcggggtcct tcatgaaggc caggcgcagg tccagccagt
     2161 cggagcgctg gctgcggccc ttccgccgca cccgcttgag cagcacctcg gccccctcgg
     2221 gctggtgctc atcgagcagg gcctccacct cgtcgagcat gagctgggtg ccggccttgc
     2281 cgtcgcgggc ctcccgcagc tggggatggt tctcggcgtc caccatgagc agcaggtggg
     2341 ggtcccccgg gttctgaagc agcagctcct ggaggatggt gaaggacttg gcccgttcgt
     2401 cctgcagcag gtaggcctcg gccagggcct cgcgcacgtg cagttcgccg ggcaggtagg
     2461 cgctggcttc cttgagcacg gggacagcct gggcgctttc gccgcgcgcg aggtgcacct
     2521 ggcccagcag cagcagggtc tcgccgtcct tccggcgggc caccgcctcc gtggcggcct
     2581 ccagggcgcc ctgatggtcc tcctggtcga ggagcagctc ggccagcatc atgcggggct
     2641 caggatcatc gggccgcagg tccgaggcct ggtgcagggc ctcgatggcc tggtcggcct
     2701 gatcgggcag ctcctggagg agcttggcca gcagcatcca ggcctcgaag tgccgggggc
     2761 tcaggcccac cgccttgcgg gcgagcccct cggcctcctc gaagttctgg gcggcctcgt
     2821 ggagggaggc ggcggtgaag atcagctcgt agttcttggg gtccaggggc agggcctggc
     2881 ccaggcgctg ggcggcgccg ggcaggtcgg cggattccag gagggcggtg gtctccagga
     2941 gggcccgttt gagctgggac atggatttgg gccgggcgat gggcaggatg cgggcccggt
     3001 agcgggtgaa aagctcccgg gcgctgatga ggtgcaggtt ctcctccacc aggtgttccc
     3061 agcgctcgga gaaggcatgg gcgtccagct ggcggttctg ctccatctcc tgcaccaggg
     3121 ccatgaggcc gttgcgcagc atcacctcgc tgcgctcaag cttgcccagc tggtcggaga
     3181 cagtctccag gtaggtctcc acccgccgga gggtctcctc caggccggtg atgcgctcca
     3241 ggaggtgctc ctcgaggtcc tcgccgccgt cggtctcgtc gggttcgtct tcccaggtct
     3301 ggtccccggg caggatgagc agccgcgtgc cgcatttcac gcaggtctcc cggtccccgg
     3361 ggttccagga aaggcagttc tggcagtagg aaccgggcag atcgttggcc atggaaccag
     3421 gatagagggt atggtggccc cgggtgcctg aaggttttat cctggggccc tcaaggaacg
     3481 tccgatgagc gaagcgcagg acagccagga caaacgccag gaagccatgg agtgggtggg
     3541 caaggcctac cagctccaca tgaagggcga ggtcgagaag gccatcgccc tctacaccaa
     3601 gtccatcgag atccacccca cggcggaggc cttcaccttc cggggctggg cccggtcctt
     3661 cgagaaggac tacgcctcgg ccatcgagga ctgccaccgc gccatcgacc tcgaccccga
     3721 attcggcaac ccctacaacg acatcggcgc ctactacgtg gagcaggacg agcccgatga
     3781 ggccatcccc tggctccgca tggcgctgaa ggccaagcgg tacgagagct actgcttccc
     3841 ccacttcaac ctgggccggg tgttcgaggc caagggccag ctggacaagg ccctcgacca
     3901 cttccgccac gcgctggagg agaatccccg ctacgccctg gccgccaagg ccgtggagcg
     3961 ggtcaagggc aagctcgcgg cgcgcgatcc agaagccatc cgctgagagg gcctgccagg
     4021 accgcccctc aagggacccc gagggctccg gagggcccgg tcgacattgc ctaagcgccc
     4081 tggcggccgt ggcttgatag gatggactcc ctcaccaggg atagaccatg cggggcttga
     4141 agatgagtaa ggccaaggtc tggaccaacc tcctcctggg gtgcgcctgc gccgtgggat
     4201 ggagccaggg gccccaggcc atccggatca acgggaccgg cagcgggatc accctcctga
     4261 aaccgatggc cgaggcctac cggcgcgccc atccggacgt ccgcatcgac ctgggcaagc
     4321 ccctgggcag ctccggcgcc atcaaggccc tcctggcggg ggccgtggac atcgcgatca
     4381 gcagcaagcc cctcgggccc gaggacagtg ccaagggcgc ccggctcatg gcctacggga
     4441 agacgcccct ggccctcgtc gccgaatcgg gggtccccgt cgccgatctc accacccgcc
     4501 agttggaaga cgtgcttgca ggccggctga cccggttgcc ccaggggacc ccccttcgcc
     4561 tggtgctgcg cccggaaggg gacgccgaca cccagatcct gcgtgccttc tcaccggcca
     4621 tgaaccaggc gatgtcccag gcgcaggcgc ggccggggat gctcctggcc gtcactgacc
     4681 cggaggccac cgtcctgatc tccaggaccc cgggtgcctg cggggtctct ggcctggcca
     4741 gtgttctggg cgatgggttc cccttgaagg tcctcacctt caacggcgtc agcccgacca
     4801 cgggcgccct ggccaacggc acctaccccc tggccaagga cctccacgtg gtcatcacgg
     4861 cgaggacttc tgacgcggcc ctggccttcg tcgacttcct gtattcgccc caggggcgtg
     4921 ccctggccca ggccgcgggc gtctgggtgg tccccagaac cacttcgggc cattgacccc
     4981 atgaatgcct tccaccatgc ctgatccttc cgcccaacgc ctcccgcgcc tgatcgtctg
     5041 gaccatcgcc gggctgatcg ccgtgctggc cccggccatc ttctttttgg ggtcgtacca
     5101 gtacatgcgc ggcgtggtgg aagcccggac cgagtt
//
LOCUS       DATGWW010000448         2113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_33749, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000448 DATGWW010000000
VERSION     DATGWW010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33749"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..351)
                     /locus_tag="VK150_06445"
     CDS             complement(<1..351)
                     /locus_tag="VK150_06445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30982.1"
                     /translation="MSLRTSYLLPVALLVVAAPGRAGEFGTLKDEIAAARQALVTMVL
                     HRDKRGPDQQKLVKDTADLVTSHLGKVKAPAEQAAAFKELKDTWSAFKATREKELVPA
                     ILAGDKAKYERIGAG"
     gene            complement(511..1764)
                     /locus_tag="VK150_06450"
     CDS             complement(511..1764)
                     /locus_tag="VK150_06450"
                     /inference="COORDINATES: protein motif:HMM:NF024810.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HLP30983.1"
                     /translation="MKVDGEVSFTASDEQGRAIDVTYRVLDAAGGTVSSAGRYRAPLQ
                     PGTFRVQAQTADHSRSGEASITVEAFSGRLTRLSNAQVTRASHTATLLGDGSVLLVGG
                     PESSLAERFLPATRTFVDAGDTGAKRWSHTADPLPGGGVLFAGGIGVGGTLGSSSLYA
                     NGVFTPVASTMVQARYAHRAALLPDGRLLLTGGLPFTGSEVTALAACEVFDPAQKTFS
                     PASALSVPRAGHTATALADGRVLVIGGQDSTCLFGCPMQVWQTAELYDPATGTFQPTG
                     AMAQRRFNHTATLLPDGRVLVAGGTTPDLPDTDVSSLVEIYDPATGRFQAVGQLLRPR
                     SQHTATLLGDGTVLLAGGLTFGENTMASATVEAFNPATGLSRLTLSDATTRYRHAAVR
                     LLAGQVLVVGGSEGGGPIPIAELYE"
BASE COUNT          336 a          716 c          740 g          321 t
ORIGIN      
        1 cccggcgccg atccgctcgt atttcgcctt gtcccccgcc aggatggccg gcaccagttc
       61 cttctcgcgg gtggccttga aggcggacca ggtgtccttc agctccttga aggcggccgc
      121 ctgctccgcc ggcgccttga ccttccccag gtgggaggtc accagatcgg cggtgtcctt
      181 caccagtttc tgctggtccg ggccgcgctt gtcgcggtgc agcaccatgg tcaccagagc
      241 ctggcgagcc gcggcgatct cgtctttcag ggttccgaat tcgccggcac ggccgggcgc
      301 ggcgaccacc agcagggcca cagggaggag gtacgaagtg cggagggaca tggaagactc
      361 ctgggtggcg ccgcggtctg acccggacat cctgttccat gatccatgga tcgtgaattt
      421 taatgaccct ctcgtattca attgtctaga ttttggacaa catcctcctg attcggctga
      481 agcctggccc tgggccgctt cgcggccgcc ctactcgtac agctcggcga ttggaatggg
      541 gccgccacct tcgcttcccc ccacgaccag gacctggccg gccaacaggc gcacggcggc
      601 gtggcggtag cgggtggtcg cgtcggaaag ggtcaggcgg ctgagccccg tggccggatt
      661 gaaggcttcc accgtggccg aggccatggt gttctcgcca aaggtgagcc ccccggccag
      721 cagcaccgtt ccatccccca acagggtggc ggtgtgctgg ctccgcggtc gcaggagctg
      781 gcccacggcc tggaaccgcc ccgtggctgg atcgtagatc tcgaccaggg aagacacgtc
      841 cgtatcggga agatctggag tggtgccgcc ggccaccagg acccgcccgt ctggcaagag
      901 ggtggccgtg tggttgaagc ggcgctgcgc catggcaccg gtgggctgga acgtccccgt
      961 ggcggggtcg tacagctcgg ccgtctgcca cacctgcatc ggacagccga agaggcaggt
     1021 gctgtcctgc ccgccgatca ccagcacccg gccgtccgcc agggccgtgg cggtgtggcc
     1081 ggcccggggc acggacaggg cgctcgcggg gctgaatgtt ttctgggcgg ggtcaaacac
     1141 ctcgcaggcg gccaatgcag tcacctcgga tccggtgaag ggcagcccgc ccgtcagcag
     1201 gaggcgccca tcgggcagca gtgccgcgcg gtgggcgtat cgggcctgca ccatcgtcga
     1261 tgcgactggc gtgaaaactc cgttggcgta gaggctggag gaccccaggg tgcctccgac
     1321 accgatgccc ccggcgaaga gcacgccgcc cccaggcagg gggtccgccg tgtgcgacca
     1381 gcgcttggcg cctgtatctc ccgcgtccac gaaggtccgc gtcgccggaa ggaaccgctc
     1441 cgccaggctt gattcggggc ctccgaccag gaggactgag ccatcgccca gcagggtcgc
     1501 ggtgtgcgat gcacgggtga cctgggcgtt ggacagccgg gtaaggcgac cggagaaggc
     1561 ctccaccgtg atggaggcct cgccactccg gctgtgatcc gcagtctgcg cctgcacccg
     1621 gaatgtcccc ggctgcagcg gggcgcggta gcgccccgcg gagctgacgg tgccgcctgc
     1681 ggcgtccagg acccggtagg tgacgtcgat cgcccggccc tgctcatcgc tggcggtgaa
     1741 ggaaacctct ccatcgacct tcaccgcggc ctgccccggc gtcagcctga gggagggtag
     1801 cggggtaccg gcgacggggc ccccaccacc gcacgccgcg aggcccaaac ccagaagggt
     1861 ggcggcgaac gggccgcaca gggagattcg gatccgaagg cccagatctg caccaagcat
     1921 cgggtgactc caaaacaaag gacccatctt aggggcaccc acccgtgccg accagatggg
     1981 atggagcagc tcagcctcgt cccggagttg cccgctggaa tacaccaggc acggaaggct
     2041 tcccggcaga aggcggcgat gggcccggac ggagggccct tcccacggaa gggacgaccc
     2101 ggtgcgccca tgg
//
LOCUS       DATGWW010000449         2039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_33808, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000449 DATGWW010000000
VERSION     DATGWW010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33808"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..243)
                     /locus_tag="VK150_06455"
     CDS             complement(<1..243)
                     /locus_tag="VK150_06455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30984.1"
                     /translation="MAEDFQPPKRRASRGRRLPEIRVRRLLAPGGMVAAALLYLVFIW
                     PTPWEYLGDNQNRRAHRFTGREQVFDRNREEWRDVRG"
     gene            496..891
                     /locus_tag="VK150_06460"
     CDS             496..891
                     /locus_tag="VK150_06460"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP30985.1"
                     /translation="MTDSSKTILVVDDEDSIRNLAALVLESHGFHVLNARHSDEALLL
                     MDSHKDSVSLLLTDVRMDPYMDGCELAKCVRLLRPDILVLYISGYTNNAMVQQEVEDA
                     RASFLPKPFSPRELVDKVHGVLTGTHHHA"
     gene            1193..>2039
                     /locus_tag="VK150_06465"
     CDS             1193..>2039
                     /locus_tag="VK150_06465"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLP30986.1"
                     /translation="MTMGGGEEEGLVPSSSRSLDRQKVVLVLSLLMAAGAFLLGALAY
                     PGEYHEGDALPGSQSWLPVLASGVLAALAFVTAGFILGVLRRASAAVPAPEPKFREIF
                     ASAPDGMVLLDGERIVAANPSLEALSGAQAQSLDGQDVALLFAEPAEGEDTLERLFSR
                     PVAASVPIHEVSLRKRDGASPRVEVSGFPFPWRGRALRVLQIRDITERKSREEARLRA
                     EVALRKSESGLRAVVTHSPVAFFAFDKDGNFTLAEGKALEPMGLRKSDLEGQSAFAKA
                     GRLRPM"
BASE COUNT          325 a          681 c          657 g          376 t
ORIGIN      
        1 cccgcggaca tcccgccact cctcgcggtt cctgtcgaag acctgctccc ggccggtgaa
       61 gcggtgggca cggcggttct ggttgtcgcc caagtactcc cagggcgtgg gccaaatgaa
      121 gacaaggtag aggagggcgg cggcgaccat gcccccggga gcgagcaggc ggcggactcg
      181 gatctccgga agccgcctgc cccgggaggc ccttctcttc gggggctgga agtcttcggc
      241 catgtcggat ccctttcctg tttaaccggg ccggaggctc gcttcagccg ggaacaagtg
      301 ctaatctact cccgcgcgcg cccgggcggg tagcgatccg ggcgggacgg ggcttctacc
      361 tgtcggcggt ggttacggcc ctccagaacc gtgggcagcg gggcttgagg tgttttgccc
      421 tgggtatggc aataatggta gcttactagt tagcgctctc cgggggggat tgtccggtat
      481 gcgccaggtg ccccgatgac cgattccagc aagaccatcc tggtcgttga tgacgaagat
      541 tccatccgga atctcgcggc cctggtcctc gagagccacg gcttccacgt cctcaatgcc
      601 cgtcacagcg acgaggcgct tctcctgatg gactcccata aagactcggt gagcctgctg
      661 ctcaccgacg tgcgcatgga cccctacatg gacggctgcg agctagccaa gtgcgtgcgg
      721 ctgttgcgcc cagacatact ggtgctctac atctccggct ataccaacaa cgccatggtc
      781 caacaggagg tggaagatgc ccgggcatcc ttcctgccca agcccttctc cccgcgcgag
      841 ctggtcgaca aggtccacgg cgtgctgaca ggcacccatc accacgcctg accccatggg
      901 taaccggccg tcttctcgga aaaagtcctg gaacagatcc acaaggtcct tgtcctaccc
      961 cttccgggaa ttttcattag cgtgatggac cggactgggc cactccggtc gcttctctca
     1021 ataggaagtg ggattatgct cacaagggca ggggcgggtg ggattgtttt ggaataccct
     1081 gatggaaaaa cctatatatt ggacccgatc cccgatgggg cttgaaggcg cattgggact
     1141 gctgggcgga gatttcggcc gccgggcggg gatccaggaa ggggtggcgg gaatgactat
     1201 gggcggaggg gaggaggagg gtctggtccc gtcttcctcc cgatccctgg accggcagaa
     1261 ggtcgtcctc gttctctccc tgctcatggc cgcgggagcg ttcctgctgg gggccctcgc
     1321 ctatcccggt gaataccacg agggcgatgc cctccccgga tcccagtcgt ggctcccggt
     1381 cctcgccagc ggggttctcg ccgccttggc cttcgtcacc gccggtttca tcctgggcgt
     1441 cctccgccgc gcttccgccg ccgtccccgc gcccgagccg aagttccgtg aaatcttcgc
     1501 ctccgcgccc gacggcatgg tcctcctcga cggcgaacgc atagtggccg cgaacccctc
     1561 tctcgaggcc ctctccgggg cgcaggccca atccctggac ggccaggacg tcgccctcct
     1621 cttcgccgag cccgccgagg gcgaggatac cctggagcgg ctcttctccc gcccggtcgc
     1681 ggcgtcggta cccatccatg aggtatcttt acggaaacga gacggcgcct ccccgcgggt
     1741 ggaggtgtcc ggcttcccct ttccgtggcg cggccgcgcc ttgagggtcc tgcagattcg
     1801 cgatatcacc gagcgcaagt cccgcgagga ggcgcggctc cgcgcggagg ttgccctgcg
     1861 caagagcgag agtggccttc gtgccgtggt cacgcacagc cccgtggcct tcttcgcctt
     1921 cgacaaggac ggaaacttca ccctggccga gggcaaggca ctcgaaccca tggggctgcg
     1981 gaagtccgac ctggaagggc agagcgcctt cgccaaggcc ggccgcctca ggcccatgc
//
LOCUS       DATGWW010000450         1732 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_307871, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000450 DATGWW010000000
VERSION     DATGWW010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307871"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1479)
                     /locus_tag="VK150_06470"
     CDS             complement(<1..1479)
                     /locus_tag="VK150_06470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30987.1"
                     /translation="MLLPLATLATPAAQVAQAFTPPTMVGDIGARPTVEEALRTAFAA
                     TAGQGPWPPGAWTVLIHPDAVAFERATGAPPGRAAQWTGTTLHLRPWEQLRRRDLGAI
                     LRHELTHRRLAAKGLRRWEEEARCLFAEGHRRPLDPTTGRPAGALQDRLDRALAGGTT
                     REQAWAYRWLRVWLKGGSLPPPPDARSRPSEVWVKEAATGAEGVTVIWPAERLRGPLV
                     VNGLRLPHRAGRSWRFRGHVRFSPGFPVRDLRGAVRVQAAVHGWRVAWTASRKAWIAA
                     ATEGELGGDAPLEARRALAAVLGQWLEGHGHQHPGGTLCPLTHCAVVRGAASEATLAA
                     AASAPALPLDPRWAFFTGSAGGRGLPPQEVWGAGPADAGSPVEVPGDRWSTWERSLDA
                     AKVAALKRDVRPGLKQGQRGLSLGDSGPYAVEALRLASGRRFGWTTWPSNACEGEVGP
                     DGALRLRGRGWGHNAGLCLATARFRATQGATAEQILDEAFPAS"
     gene            complement(1479..>1732)
                     /locus_tag="VK150_06475"
     CDS             complement(1479..>1732)
                     /locus_tag="VK150_06475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30988.1"
                     /translation="DKAEVVTFGKRFLAGTWVEFNALFGKEQWWFKTGTAPVPGDPTA
                     TSAWVAGGKGEAIVVLHLPRGRGKQEGLVRIREILGLKG"
BASE COUNT          225 a          670 c          630 g          207 t
ORIGIN      
        1 ggaggccgga aacgcctcgt cgaggatctg ttccgccgtg gcgccctggg tggcccggaa
       61 ccgggcggtg gcaaggcaga ggcccgcgtt gtggccccac ccgcggcccc ggagccggag
      121 ggcgccgtcc ggtccgacct cgccttcgca ggcgttgctg ggccaagtcg tccacccgaa
      181 gcggcggccc gacgccagcc gcagggcctc caccgcgtag ggccccgagt cccccaggct
      241 gaggccgcgc tggccctgct tcagcccggg ccgcacatcc cgcttcaggg cggccacctt
      301 tgcggcgtcg agggaacgct cccaggtgga ccagcggtct ccgggcacct cgacggggct
      361 gcccgcgtcg gcggggcccg cgccccacac ctcctggggg gggagtcccc ttcccccggc
      421 ggagccggtg aagaaggccc agcgcggatc cagcggcagg gccggcgccg acgccgcggc
      481 ggcgagcgtc gcctccgagg ccgccccgcg caccacggcg cagtgggtca ggggacagag
      541 ggtgccgccg ggatgctggt ggccgtggcc ctccagccac tggccgagca cggcggccag
      601 ggcccgccgg gcctccaggg gcgcgtcgcc tcccagttcc ccctcggtgg ccgcggcgat
      661 ccaggctttc cgggaggcgg tccaggcgac ccgccagccg tggacggcgg cctgcacccg
      721 caccgcgccg cggagatcgc gaacggggaa ccccggtgaa aaccgcacat ggccgcgaaa
      781 ccgccacgac cttccggcgc ggtgaggcag ccgcaggcca ttgacgacca agggcccccg
      841 caggcgttcg gcgggccaga tcaccgtcac cccctccgcc ccggtggcag cctctttcac
      901 ccacacctcg gaaggccggc tccgcgcgtc gggcggcggt ggcaaagacc cacccttgag
      961 ccagacccgg agccaccggt aggcccaggc ctgctcccgg gtggtgccgc ccgccagggc
     1021 ccggtccagg cggtcctgca gggccccggc cgggcggccc gtcgtggggt ccagaggtcg
     1081 ccgatgcccc tccgcaaaga ggcagcgggc ctcctcctcc cagcggcgaa gacctttggc
     1141 ggccagccgg cgatgggtca gctcgtggcg aaggatcgcg cccagatcgc gccgccgcaa
     1201 ttgctcccag ggccgcaggt ggagggtggt tcccgtccat tgcgcggccc ggcccggcgg
     1261 cgcgccggtg gcccgctcga aggcgaccgc gtccgggtgg atcagcaccg tccatgctcc
     1321 cggcggccag ggtccctgcc cggccgtcgc cgcgaaggcg gttcgaagcg cctcctcgac
     1381 cgtgggccga gccccgatgt ccccgaccat cgtcggtggg gtgaaagcct gggcaacctg
     1441 cgctgcgggt gttgcgagcg tggcgagcgg aaggagcatc aacccttcag cccaaggatc
     1501 tcgcggatgc ggacgagtcc ctcctgcttc ccccggcccc tgggcaggtg cagcaccacg
     1561 atggcctcgc ccttgcctcc ggccacccag gcgctggtgg cggtggggtc gccaggaacc
     1621 ggggccgtgc cggtcttgaa ccaccactgc tccttgccga agagggcgtt gaactcgacc
     1681 caggtgcccg ccaggaaccg cttgccgaag gtcaccacct cagccttgtc gg
//
LOCUS       DATGWW010000451         5775 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_113642, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000451 DATGWW010000000
VERSION     DATGWW010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5775
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113642"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1047)
                     /locus_tag="VK150_06480"
     CDS             complement(<1..1047)
                     /locus_tag="VK150_06480"
                     /inference="COORDINATES: protein motif:HMM:NF017726.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HLP30989.1"
                     /translation="MAQRLPWTPDWAPQGSHQPRVRSVNFGDGYQQDQVDGLNADLPT
                     WEVIFSNRTKAEADAIEAFLRARGGADRFLFKIPDSDYSVSGHGFGVGDGSTAVFQLQ
                     RTRVTTVMDALGTYAKPTTPNTNYLRYSQDLNNGAWSLSGASIAAEGAVAPDGNLTAE
                     VLTSTGTDPWIAQSVTLQPGTYCLSMWVRGAGSSVGKTCRIWAWFNGTATGATGGGGQ
                     QGIGSGWTRVSETFTVTSGGTLALRLDIPDTGAAASDAVHIWGAQANPGSTASPYIYT
                     TTAAVTVNPSYYPSTTDGFEAVMDAPVDLVIYVAGVAKARGADYSVSATGAITLTVAP
                     AAGAALTWSGSGADW"
     gene            complement(1051..3921)
                     /locus_tag="VK150_06485"
     CDS             complement(1051..3921)
                     /locus_tag="VK150_06485"
                     /inference="COORDINATES: protein motif:HMM:NF040129.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HLP30990.1"
                     /translation="MTDLAKLTIAVDTRQVVSGGKDLDNLASKTERAEAAASRMGKVF
                     AGLSLAAGVGIAGRQIWDTNKEFERLNTSLITVTKSQERANQVQADLMDFAAKTPFQL
                     REVTEAYIMMRARGLDPTRATMTSLGNLASGMGRSFQDTIQAVGSLAAGEIEPMKQLG
                     FSVMTIGDKVRISSEGVSRTVSRNAYDISKAVAQISDQKFGGGMERQINTLGGAWSNL
                     MDQIDATIYKMGQAGFNTEARGAIQGLTEQINQATPAMARFAAEAVSGSVSAVHWLGE
                     HQKAILGLGAAYATIKAGMAYGGVVNEFANPKTGSDAGLGSKIRGVTDYVQAMQLARA
                     EQLAYAENEVRGAAVTLAQTRANYDAIQVQGAKSAMWIHQRAQEKLLATAQVEVTAAT
                     TAHTLATERQIAVQRANGAAATASAMASKGFGMVVNALGGPVGAVTTALVLGGTAAYL
                     WGDKLKSSATVATENAEKLLVKLREEVQLLERRRSLATSNAPGAKQAASILDDDELKK
                     TDDAIKAAGDFQRAIAFAQEDRKKYSEDSEDYIAAVQRESKAQAGLNKVMGKYSEIIS
                     KAQRRANVKSADAADAKAASDAEAAKLAEKAKREMKEQRDALEAQRLVEERKTLVRSL
                     AKDNAEGLALIQSGMTGANVSKTEQDIIKLQADAKRLKLTASEMAVVNERIRQLRQEA
                     DAEKQRQHQDDMAQWNAEQDRKKRETGYEVDKAREAFMFSELDAATRLRDEDTKLAAQ
                     VKMLNQIYADGNVTEREYRDRMIELGKQAHIMTDTFGDLRDTINDWSRQGTDAMVDFF
                     FTGKNGFSDMISSWLRDLARLTVQRNVMDPLTKGLTGFDWGSLFGGSSAALSTVNLPQ
                     GIFDLPAASGGYRSGNLPYLVGENGPEIFSPGRPGTITPNGAIGGQTINVSMSVNVDA
                     NGNAQVQTQAGSADFAKGLKGVVVGYIQDEMRPGGLLMAVGR"
     gene            complement(3887..4246)
                     /locus_tag="VK150_06490"
     CDS             complement(3887..4246)
                     /locus_tag="VK150_06490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30991.1"
                     /translation="MHAFRLAKRDAEGVTLADKGEHLERTTGRRPAFMDGPEMPPGAL
                     HVWEWFQDLQRGRTSNGFGLSTFSWSDLQAFFSLTGIDPRPWEVRLIRTFDHAYLAAN
                     ATEENTNDGPRKADDRG"
     gene            complement(4269..4637)
                     /locus_tag="VK150_06495"
     CDS             complement(4269..4637)
                     /locus_tag="VK150_06495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30992.1"
                     /translation="MDLSKIKAVPTILVTFSQSYLDGVEMELSGPSHTATKAAERKRD
                     DAMAQAGRKGLQADVRRKILDEYLAARILSWKGIEWDGEEMACNVENALKILGAPDLS
                     SIREELLAALGDDERNYKSA"
     gene            complement(4646..5557)
                     /locus_tag="VK150_06500"
     CDS             complement(4646..5557)
                     /locus_tag="VK150_06500"
                     /inference="COORDINATES: protein motif:HMM:NF039819.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tube protein"
                     /protein_id="HLP30993.1"
                     /translation="MPGETGNQTRLSYIKEVTFGTTPATPTGTILRWTNLDLGPDRDY
                     LENPEMRTDRQYVPGRGGVILGKGSFGGPLSYGTYDDFLASALGTDWATNVSKVGTTR
                     LSFTMEKGHLVNGIYFPYTGVVVNGFELSGKANQNVEAKFDLISKAAGNEAAATIWSG
                     TTAANTNPLITSWDGTVKKGGSTMGTVVGWSLKGDNSYEDAYVCGQSSLYDLQPGRLK
                     LTGSLELYFDSSALYTDFRAENEFALQLNLGPGGTKSYTIDLGRCRITKWVSNPNDEN
                     LMTQTVEIECYAPTAGTDTAMKLTRLP"
     gene            complement(5566..>5775)
                     /locus_tag="VK150_06505"
     CDS             complement(5566..>5775)
                     /locus_tag="VK150_06505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP30994.1"
                     /translation="LQVSVFAPSTDARGIQPALEIVAKIADHFDGARLSGAGVVLQCG
                     VPTPGPMVQEPGYNQFPVSIPFQVL"
BASE COUNT          851 a         1861 c         1912 g         1151 t
ORIGIN      
        1 ccagtcagcc ccggatccgc tccaggtgag cgcggcgcca gccgcggggg ccacggtgag
       61 ggtgatcgcc ccggtggcgc tgaccgagta atcggccccc ctcgccttgg ccacgccagc
      121 aacgtagatc accagatcca ccggggcgtc catgactgcc tcaaatccat ccgtggtcga
      181 tggatagtag gacgggttga cggtgacagc ggcggtcgtg gtgtatatgt aggggctggc
      241 ggtgctcccg gggttggcct gggcgcccca gatgtgtacc gcgtccgagg cggcggctcc
      301 ggtatcaggg atgtcaaggc ggagggccag cgtacctcca gaggtgaccg tgaatgtctc
      361 gctgacccgc gtccatccgg atccgatccc ctgctgccct ccgccgcctg tggccccggt
      421 cgccgtcccg ttgaaccatg cccagatccg gcaggtcttg ccgacgctcg aaccagcccc
      481 ccgaacccac atgctgaggc agtaggttcc cggctggagc gtgacggact gggcaatcca
      541 cgggtctgtc cccgtggagg tgagaacctc cgccgtcaag ttgccgtctg gggccacggc
      601 gccctctgct gcgatggagg ctcccgacag gctccatgcc ccgttgttaa ggtcctgtga
      661 gtagcgcaaa tagttggtgt ttggggtggt tggcttggca taggtcccca gggcgtccat
      721 gaccgtggtc acgcgcgtcc gctggagctg gaacacggcg gtgcttccgt cccccacccc
      781 gaagccgtgg ccgctcacgc tgtagtccga atccgggatc ttgaacagga accgatcagc
      841 cccgccccgg gcccggagga acgcctcgat ggcatccgcc tcggccttcg tgcggttgct
      901 gaagatgacc tcccaggtgg gcaggtccgc gttgagcccg tccacctgat cctgctggta
      961 gccgtcgccg aagttgacgg acctcacccg gggctggtgg gagccctggg gggcccagtc
     1021 gggggtccac ggaagtcgct gggccatggt ctacctcccc accgccatga gcagcccgcc
     1081 gggccgcatc tcgtcctgga tgtagcccac caccacgccc ttgaggccct tggcgaagtc
     1141 ggctgatcca gcctgggtct gcacctgggc gttcccattc gcgtccacgt tgaccgacat
     1201 gctgacgttg atggtctggc cgccgatggc accgttgggc gtgatggtgc ccgggcgccc
     1261 ggggctgaag atctccggac cgttctcgcc caccagatag ggcagattcc cgctacggta
     1321 gcctccagag gccgccggca gatcgaagat gccctggggg aggttcacgg tagagagggc
     1381 cgcgcttgaa ccaccgaaga ggctgcccca gtcgaagccg gtgagcccct tggtcagcgg
     1441 gtccatgacg ttgcgctgga ccgtcagcct cgccagatcc cggagccagg aggagatcat
     1501 gtcggagaat ccgttcttcc ccgtgaagaa gaaatccacc atggcgtccg tgccctgcct
     1561 ggaccagtcg ttgatggtgt cccgcaggtc gccgaaggtg tccgtcatga tgtgggcctg
     1621 cttcccgagt tcgatcatcc ggtcccggta ttcgcgctcg gtcacgttcc catcggcgta
     1681 gatctggttg agcatcttga cctgggccgc cagcttcgtg tcctcgtccc gcagcctcgt
     1741 ggcggcgtcg agttcggaga acatgaacgc ctcgcgggcc ttgtccacct cgtagcccgt
     1801 ctcccgcttc ttgcggtcct gctcggcatt ccactgagcc atgtcgtcct ggtgctggcg
     1861 ctgcttctct gcgtccgctt cctggcgcaa ctggcggatg cgctcattga caacggccat
     1921 ttctgaggcc gtcagcttga gccgcttggc gtcggcctgg agcttgatga tgtcctgctc
     1981 ggtcttggag acgttggctc cagtcatccc agactggatc agggccaggc cctctgcatt
     2041 gtccttggcg agagagcgaa ccagggtctt acgctcctcc acgaggcgtt gtgcttccaa
     2101 ggcatcacgc tgttccttca tctcgcgctt ggccttctcg gcaagcttgg ccgcctcggc
     2161 atcgcttgcc gccttggcat cggcagcatc cgcgctcttg acgttggccc tacgctgggc
     2221 cttactgatg atctcggaat acttgcccat gaccttattg aggcccgcct gagctttgga
     2281 ttcgcgctgg acagctgcga tgtaatcctc ggagtcctca ctgtactttt ttcgatcctc
     2341 ttgcgcgaag gcgattgccc tttgaaagtc cccggcagcc ttgattgcat cgtccgtctt
     2401 ctttagttcg tcgtcatcga ggatcgaggc agcttgcttt gctccaggag cgttgctcgt
     2461 ggctagggag cgccgacgct caagaagctg gacctcctcg cggagcttca cgagaagctt
     2521 ctccgcgttc tcggtcgcca cggtggcgct gctcttgagc ttgtcccccc agaggtaggc
     2581 ggcggtcccg cccagcacga gcgcggtggt tacggcgccc acggggcccc cgagggcgtt
     2641 cacgaccatt ccgaatccct tggacgccat ggcagaagcg gtcgcggcgg ctccattggc
     2701 acgctgcact gcaatctgcc gctccgtagc caaggtgtgg gcggtcgtgg ccgcagtgac
     2761 ctccacctgc gcagttgcca ggagcttctc ctgggcacgc tgatggatcc acatggcaga
     2821 ctttgcaccc tggacctgga tggcatcata gttggccctc gtttgggcca gggttacggc
     2881 agccccgcga acctcatttt cggcataggc aagctgctcg gcacgagcca gttgcatcgc
     2941 ctggacgtag tcggtgacgc ccctgatctt cgatcccagg ccggcgtccg aacctgtctt
     3001 ggggttggcg aattcgttga ccacccctcc gtaggccatg cccgccttga tggttgcgta
     3061 ggccgctcca agtcccaaga tggccttctg gtgctcaccg agccagtgga ccgccgaaac
     3121 ggacccgctg accgcctcgg cggcgaaccg cgccatggcc ggggtcgcct ggttgatctg
     3181 ctcggtgagg ccctggatcg cgccccgggc ctcggtgttg aacccggcct ggcccatctt
     3241 gtagatcgtg gcgtcgatct ggtccatgag gttggaccag gccccgccca gggtgttgat
     3301 ctgccgctcc atgccgccgc cgaacttctg gtccgagatc tgggccacgg ccttggagat
     3361 gtcgtaggcg ttccggctca cggtgcggct cacgccctcg ctggaaatgc gcaccttgtc
     3421 gccgatggtc atgaccgaga agcccaactg cttcataggc tcgatctcgc cggccgccag
     3481 ggagcccacg gcctggatcg tgtcctggaa cgagcgcccc atgcccgagg ccaggttgcc
     3541 caggctcgtc atggtggccc gcgtagggtc caggccccgg gcccgcatca tgatgtacgc
     3601 ttccgtgacc tcccgaagct ggaagggcgt cttggcggcg aagtccatca ggtccgcctg
     3661 gacctgattg gcccgctcct gactctttgt gacggtgatc agcgaggtat tcagccgctc
     3721 gaattccttg ttggtgtccc agatctgccg gcccgcgatg cccaccccgg cggcgaggct
     3781 gagccctgcg aagacctttc ccatcctcga cgccgcggcc tcggcacgct ccgtcttcga
     3841 ggccaagttg tcgaggtcct tgccaccgga aacgacctgc cgggtgtcaa ccgcgatcgt
     3901 cagctttgcg aggtccgtca ttggtgttct cctcagtggc gttggcggca agataggcgt
     3961 ggtcgaaggt gcggatcagc cggacttccc aggggcgagg atctatgccg gtcagggaga
     4021 agaaggcctg gaggtcggac caggagaagg tgctgaggcc aaatccgttg ctggtccgcc
     4081 ccctctggag gtcttggaac cattcccaga cgtggagggc accaggtggc atctccgggc
     4141 cgtccatgaa ggcgggacgc ctcccggtcg tgcgctccag gtgctccccc ttgtcggcca
     4201 gggtgacgcc ttccgcatcg cgtttagcaa ggcggaaggc atgcaccgcg gctgcacggg
     4261 cctcatcctc aagcgctttt gtagttgcgc tcgtcgtccc ccagggcggc cagcagctcc
     4321 tcacggatcg aggagaggtc gggagctccc aggatcttca gggcgttctc gacgttgcag
     4381 gccatctcct cgccgtccca ctcgatgccc ttccaggaca ggatgcgggc ggccagatac
     4441 tcgtccagga tcttccggcg cacatcggcc tgaagcccct tgcggccggc ctgggccatg
     4501 gcatcgtcgc gcttgcgctc ggcggccttg gtggcggtgt gggagggacc ggagagttcc
     4561 atctccacgc cgtccaggta ggactgggag aaggtgacga ggatggtggg gacggccttg
     4621 atcttgctga ggtccacggt tgctcctagg gcaggcgggt tagcttcatg gcggtgtcgg
     4681 tgccggccgt gggggcgtag cactcgattt ccaccgtctg ggtcatgagg ttttcgtcgt
     4741 tggggttgct gacccacttg gtgatgcggc agcggcccag gtcgatcgtg tagctcttgg
     4801 tcccgccggg gcccaggttg agctggagcg cgaactcgtt ctccgcccgg aaatccgtgt
     4861 agagcgccga gctgtcgaaa tacagctcca ggctcccggt gagcttgagc cggcccggct
     4921 ggaggtcgta gaggctggac tggccgcaga cgtaggcatc ctcataggag ttgtcgccct
     4981 tgaggctcca gcccaccacg gtgcccatgg tggagccgcc cttcttcacg gtgccgtccc
     5041 aactggtgat cagggggttg gtgttcgcgg cggtggtgcc gctccagatc gtcgcggcgg
     5101 cctcgttccc tgcggccttc gagatgaggt cgaacttggc ctccacgttc tggttggcct
     5161 tccccgacag ctcgaagccg ttgaccacta cacccgtgta ggggaagtag atcccgttga
     5221 ccaggtgacc cttttccatc gtgaagctga ggcgggtcgt gccgaccttg ctcacgttcg
     5281 tcgcccagtc cgtgcccagg gcggaggcca ggaaatcgtc gtaggtgccg taggagaggg
     5341 gcccgccgaa gctccccttg cccaggatga cgcccccgcg cccggggaca tactgccggt
     5401 ccgtgcgcat ctcggggttt tcgaggtagt cccggtcggg gccgaggtcc aggttggtcc
     5461 agcgaaggat ggtgccggtg ggggtggcgg gggtggtccc gaaggtcacc tccttgatgt
     5521 agctcaggcg cgtctgattt ccggtttcac cgggcatggg tcacctcaca gaacttggaa
     5581 ggggatggag acggggaact ggttgtagcc gggctcctgg accatgggcc caggggtggg
     5641 gacgccgcac tgaagaacga cgccggctcc cgaaagacgg gccccgtcga agtggtccgc
     5701 gatcttggcg actatctcca gggcgggctg gatgcctcgg gcatccgtgg acggggcgaa
     5761 gacggagacc tggag
//
LOCUS       DATGWW010000452         3999 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_152665, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000452 DATGWW010000000
VERSION     DATGWW010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3999
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152665"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..841
                     /locus_tag="VK150_06510"
     CDS             <1..841
                     /locus_tag="VK150_06510"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HLP30995.1"
                     /translation="QREPLWVAATRSGVRTAVFQWVGATGPWEGVSPWRLEVFRLGRP
                     DTEALAFSEAALKDGAQLVMAYLSGTDEEGHLQGPHSEAAHRKLKAMDDQLAPWLQRL
                     QAAYPGLRVIITADHGMAPMRRRIHLPSLLDGIGCELITHGGSAYVYLQNPKDAPRAL
                     ARLRRAGLKAWSRERIPAAYHLAGSPRVGDLVVLAKPGQWLSKARSSREEQDERHGRC
                     GAHAYTSDTPAMRTWLVVLGAGRGPLGPVPLWDLAPTVASWLDIRWNQAPDGRPVPRL
                     TGR"
     gene            complement(845..2530)
                     /locus_tag="VK150_06515"
     CDS             complement(845..2530)
                     /locus_tag="VK150_06515"
                     /inference="COORDINATES: protein motif:HMM:NF018530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate:alanine exchanger family transporter"
                     /protein_id="HLP30996.1"
                     /translation="MIEQVLFFFAHNPLLMLFAVVALGYPISKIRIAGASFGIASILF
                     AGIALGALVMAPGLDPGLKKGISKEMKLVYELGLAVFVYAMGLSISHSFWAAFSREGM
                     KKNAVVFLVMLASTAFVVVLAKAMGFNARYAAGLLTGSFTNMPALAGVIERVKTMAGV
                     GPVELAQPTVASAIAYPIGVLVPMLIILLSSKVFRVNLKEEADGLKDYQTGHQKLEVW
                     TVRVTKPEAEAMSKRDLCAAGQLHVVFGRVLRKAELLLPTPDLRLKLDDLVTVVGSPD
                     DLAQVEALIGQRSHVELDRDQSALDATRVFVSRWDVVGVPLGRLDLVNKHQAIITRVR
                     RGDLWFVPDGDTVLELGDRVRVTTRRDNIEAIEDFFGDSYRALSEVSFLTFAMGLAAG
                     LALGQLPIPLGHGIIFKLGFAGGPLAVALILGRFHRIGPLVWNFPYSANHTIRQFGLV
                     LFAAGIGVISGEGFRAIVSKDASVLPIFLGAAFLVCFVADSLTMVLGHKLFGIPLNIM
                     FGILAGTHTQPVVLGYASHQTGNDLPNVGFATVYPLATILKIVLAQVLLALIR"
     gene            complement(2565..3599)
                     /locus_tag="VK150_06520"
     CDS             complement(2565..3599)
                     /locus_tag="VK150_06520"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HLP30997.1"
                     /translation="MPRFYFDANATTPPHPEVVEVVRQAMAEDWANPTSTHREGQRAR
                     FRLEEARREIAASLAVAPGELVFCASATEALHLLIRGLALALGDRPAAVFPGEHSACL
                     NPLRDWSRIAWLPELPRDCATVVQMAASNETGILYDMPPVVDAVRVRDCCQAWGKVPV
                     DLSTCDAAVFSGHKMGGPRGAALLWMRPGLPWDAIMEGPQERRRRGGTEDLPAILGLA
                     AAVRHLTERQAKHAALADLRAAFETEITSWNRDIEVIGQDAPRLPNTSCVLFRGRNGE
                     ALHASLDLAGFAVSTGSACHSGSVKPSHAITTLGYSLEDARSVLRFSMLPDAQPDEVE
                     ALAAAIKRLT"
     gene            3663..>3999
                     /locus_tag="VK150_06525"
     CDS             3663..>3999
                     /locus_tag="VK150_06525"
                     /inference="COORDINATES: protein motif:HMM:NF017953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase"
                     /protein_id="HLP30998.1"
                     /translation="MPQSLEGKLVVAISSRALFDFEEENRVFEEADDRAYMALQLARL
                     DVPAKPGVAFPLVKKLLAFNTEGENRVAVVILSRNDPVSGLRVFRSAQESNLQLERGV
                     FTRGRNPYPY"
BASE COUNT          650 a         1404 c         1367 g          578 t
ORIGIN      
        1 gcagcgcgag ccgctctggg tggctgccac ccgcagcggg gtgcgcaccg cggtcttcca
       61 gtgggtcggc gccacggggc cctgggaggg cgtgtcgccc tggcgcctcg aggtcttccg
      121 cctgggccgc cccgacacgg aggccctggc cttcagcgaa gccgcgctca aggatggcgc
      181 gcagctcgtc atggcctacc tctcgggcac cgacgaggag gggcacctgc aggggcccca
      241 cagcgaggcc gcccatcgga agctcaaggc catggacgat cagctcgccc cctggctcca
      301 gcgcctgcag gccgcgtacc cagggctccg cgtcatcatc accgcggacc acggcatggc
      361 gcccatgcgc cgccggatcc acctgccatc gctgctggac ggcatcggct gcgagctcat
      421 cacgcacggc ggcagcgcct acgtctacct ccagaacccg aaggatgccc cgcgggccct
      481 ggcgcgcctg cgccgggcgg gcctgaaggc ctggtcgcgg gagcggattc ccgccgccta
      541 ccacctcgcg gggagccccc gggtcggcga cctcgtggtg ctggccaagc ccggccagtg
      601 gctctcgaag gcccgctcca gccgcgagga gcaggacgag cgccacggac gctgcggcgc
      661 ccacgcctat acctcggata ccccggcgat gcgcacctgg ctcgtcgtgc tcggcgccgg
      721 gcggggcccc ctcggacccg tgcccctctg ggatctggcc cccaccgtgg cctcctggct
      781 ggacatccgc tggaaccagg cgccggacgg acggcccgtg cctaggctga ccgggcggta
      841 gacgtcaccg gatcagcgcc agcagcacct gggccagcac gatcttgagg atggtggcca
      901 acgggtagac cgtggcgaag cccacgttgg gcaggtcgtt gcccgtctgg tggctggcgt
      961 agcccaggac caccggttgc gtgtgggtgc ccgccaggat gccgaacatg atgttcaggg
     1021 ggatgccgaa cagcttgtgg cccagcacca tggtcagtga atccgccacg aagcagacga
     1081 ggaaggcggc acccaggaag atgggcagca ccgaggcgtc cttcgagacg atggcccgga
     1141 agccctctcc cgaaatcacc ccgatgcctg ccgcgaagag cacgaggccg aattgccgga
     1201 tcgtgtggtt ggcgctgtag gggaagttcc agaccagcgg cccgatgcga tggaaccggc
     1261 ccaggatcag cgccacggcc aggggaccac ccgcgaagcc cagcttgaag atgatgccgt
     1321 ggcccagagg gatgggcagc tggcccaggg cgaggccggc ggcgagcccc atggcgaagg
     1381 tgaggaagct cacttcgctg agggcgcggt agctgtcgcc gaagaaatcc tcgatggcct
     1441 cgatgttgtc gcggcgggtc gtcacgcgca cccggtcgcc cagctccagc accgtgtcgc
     1501 catcgggcac gaaccagagg tcgccccggc gcacgcgggt gatgatggcc tggtgcttgt
     1561 tcaccaggtc gagccggcct aagggcacgc ccaccacgtc ccagcgcgac acgaagaccc
     1621 gcgtggcgtc cagggcgctc tgatcgcggt ccagctccac atggctgcgc tggccgatga
     1681 gcgcctccac ctgcgccagg tcatccgggg agcccaccac ggtcaccagg tcgtccagct
     1741 tcagccggag gtccggggtc ggcagcagca gctccgcctt gcgcagcaca cgaccgaaga
     1801 cgacgtgcag ctgcccggcg gcgcagaggt cgcgcttgct catggcttcg gcctcgggct
     1861 tggtcacccg caccgtccag acctccagct tctggtggcc ggtctggtag tccttgaggc
     1921 cgtccgcctc ctccttgagg ttcacgcgga acaccttgga gctgaggaga atgatgagca
     1981 tgggcaccag cacgccgatg ggataggcaa tggccgacgc gacggtgggc tgggccagct
     2041 ccaccgggcc cacgcccgcc atggtcttca cccgctcgat gacgcccgcc agggcgggca
     2101 tgttcgtgaa gctgccggtg agcaggcccg cggcgtagcg ggcgttgaag cccatggcct
     2161 tggccagcac caccacgaag gctgtggagg ccagcatgac gaggaagacc acggcgttct
     2221 tcttcatgcc ctccctgctg aaagcggccc agaagctgtg cgagatggag aggcccatgg
     2281 catagacgaa caccgccagg cccagttcat agacaagctt catctccttg gagatgccct
     2341 tcttcaaacc tggatccagg ccgggggcca tgaccagcgc gccgagggcg atgccggcga
     2401 agaggatgct ggcgatgccg aaggaggcgc cggcgatgcg gatcttgctg atggggtagc
     2461 ccagggccac caccgcaaac agcatgagga gcgggttgtg agcgaagaag aagagaacct
     2521 gttcgatcat gttcactccg cgtccggacc gggtctcccc ggattcatgt caaccgcttg
     2581 atggccgccg ccagggcctc cacctcgtcg ggctgcgcgt ccggaagcat cgagaaacga
     2641 agcaccgagc gcgcgtcctc caaactatac cccaaggtcg tgattgcatg actgggcttc
     2701 acggacccgc tatggcaggc gctgccggtg ctcacggcga atccggccag gtcgagcgac
     2761 gcgtgcagag cctcgccatt cctgcctctg aacagcacgc agctggtgtt gggaaggcgc
     2821 ggcgcatcct ggccgatgac ctcgatgtcg cggttccagg atgtgatttc cgtctcgaat
     2881 gccgcccgga gatccgccag agccgcgtgc ttcgcttgac gctccgtcaa atgccggacc
     2941 gcggcggcca ggccgaggat ggcgggcagg tcctcggtgc cgccgcgccg gcgccgctcc
     3001 tgggggcctt ccatgatcgc gtcccagggc aggcccggcc gcatccagag cagggccgcg
     3061 ccccgggggc cgcccatctt gtggccgctg aacaccgcgg cgtcgcaggt gctcagatcc
     3121 acgggcacct tgccccaggc ctggcagcag tcccggacgc ggacggcgtc caccaccggc
     3181 ggcatgtcat agaggatgcc cgtctcgttg ctcgcggcca tctgcaccac cgtcgcgcag
     3241 tcccggggaa gctcgggcag ccaggctatt cgcgaccagt cccgcaaggg gttcaggcag
     3301 gcgctgtgct cgcccggaaa cacggccgcg gggcgatccc ccagggccag cgccaggccc
     3361 cggatcagca gatgcagcgc ctcggtggcg ctggcgcaga acaccagctc gcccggcgcc
     3421 accgccaggg acgcggcgat ctcgcgccgg gcctcctcga gcctgaaccg cgcccgctgg
     3481 ccctcccgat gggtgctggt gggattggcc cagtcctcgg ccatggcctg ccgcaccacc
     3541 tccaccacct cgggatgggg cggcgtggtg gcgttggcgt cgaagtagaa gcgcggcatg
     3601 aaaccagtct acagagcgga gtctggagcc tggagtctgg gttcatcagc taccctaaga
     3661 ccatgcccca gtccctcgaa ggcaagctcg tcgtcgccat ctcctcgcgc gccctcttcg
     3721 acttcgagga ggagaaccgg gtcttcgagg aggccgacga ccgggcctac atggcgttgc
     3781 agctcgcgcg cctggacgtg cccgccaagc ccggcgtggc cttccccctg gtgaagaagt
     3841 tgctggcctt caacacggag ggcgagaacc gcgtggcggt ggtgatcctc tcccgcaacg
     3901 atcccgtgag cggcctgcgg gtgttccgca gcgcccagga atccaatctc cagctcgagc
     3961 ggggcgtctt cacccggggc cgcaacccct atccctacc
//
LOCUS       DATGWW010000453         4224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_347763, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000453 DATGWW010000000
VERSION     DATGWW010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4224
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347763"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1298)
                     /locus_tag="VK150_06530"
     CDS             complement(<1..1298)
                     /locus_tag="VK150_06530"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLP30999.1"
                     /translation="MSLLPFTQKANDALVTARQRALQDHHPELVPQHLLLALLAPGAG
                     LHPLLERAGLTPQAIQGLADGAEDLVAKLPRAVGGSEPQVGPAFRHFLEVASDTGRGL
                     GDRFLATDALLLALTNAHTDAKKLLERFGLDRPKLEAAIREVRKGSRVDDEKAEEAFA
                     SLEKYAKDYTALAAAGKLDPVIGRDEEVRRVMQVLSRRTKNNPVLIGEPGVGKTAIVE
                     GLAQRIHKRDVPESLKGLRVMGLDMGALVAGTQYRGQFEERLKGIIQEVEKAEGQVVL
                     FIDELHLLVGAGAVGGSMDAANLLKPALARGELRCIGATTLDEYRKHVEKDPALERRF
                     QPVFVEEPGVEDAISILRGLKERYELHHGVRIQDAALVAAAQLSHRYIADRFLPDKAV
                     DLMDEAASAVRMQLDSRPTEIDVRERREMQLQLERHSLTK"
     gene            1476..2147
                     /locus_tag="VK150_06535"
     CDS             1476..2147
                     /locus_tag="VK150_06535"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin-like family protein"
                     /protein_id="HLP31000.1"
                     /translation="MRSHPAILLLTILLGGMPLPAQAPAASDPKAIMAKAQDDLIKSG
                     QAERAIRQGQKAPDFVLPDAQGRPRRLSDLLKKGPVILTFYRGGWCPFCNLQLKSYQA
                     HLAEFRARGAELVAVSPQTPDATVSTADKAALTFPVLSDVGNQVARRYGLVFKVSDEV
                     VPIYKQFGIDLEKTNGDASHELPMPGTYLIGRDGTVLLSQVEADYTKRMPAETLLAAL
                     KQGQP"
     gene            complement(2144..3382)
                     /locus_tag="VK150_06540"
     CDS             complement(2144..3382)
                     /locus_tag="VK150_06540"
                     /inference="COORDINATES: protein motif:HMM:NF018448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HLP31001.1"
                     /translation="MATLSAPTSTPPGPPAEVELCLELGRAYQAFGIPAHRFEDALTH
                     ISARLGLEGQFFALPTAFFASLGLGGQHWTFIQRSPAGDVNLAKLSDLQETTDAIIAG
                     RLSAPEARERVRGIIAAPDRWGALLTVACFGLGSAPAAAFFGGGWREMALTAVIGALV
                     GLTAVLLGRKAGSSRLVHPVAGTLVGFLSLAAAYRFPHVSPQVLTLAGLIVLLPGLRL
                     VVSMNELATGNLVAGTARLVDTGMTFLSLGFGVALGQRLAAPLLDQALLGTPLPLPAW
                     TLLPTLVLAAAAFVVIFKARVSDLPWIFAACALAFYGTRQGAALLGPQFGVGLGAFAL
                     GLGSNLYTRLQHRPSVVTLLPGLMVLVPGGLGFRGLEFIIQKQVVMGLDTAFQALFVA
                     IALLTGLLLAHAAVQPRTAL"
     gene            complement(3482..>4224)
                     /locus_tag="VK150_06545"
     CDS             complement(3482..>4224)
                     /locus_tag="VK150_06545"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLP31002.1"
                     /translation="LSAAEARGLEPRLRCTAALLSPSTGIVDSHGLMRALRLDAEAAG
                     ATVVLKSPVLAGRRTPEGLAFDVGGDEPMTFLAERATTCAGLGAIAVARAFEGARPES
                     LPPAPRRFAKGNYYSLGGPAPFSRLVYPVPSQGGLGVHLTLDLAGQARFGPDMEWVDR
                     EEYDVDPRRADSFYAEVRQYWPELPDGALQPAYAGIRPKLHAQGEPAPDFLIQREEQH
                     GVPGLVHLLGIESPGLTASLALADEAAR"
BASE COUNT          645 a         1480 c         1526 g          573 t
ORIGIN      
        1 tccttggtga gggagtgccg ttccagctgc agctgcatct cccgccgctc gcggacatcg
       61 atctccgtgg gccggctgtc cagctgcatc cgcacggcgc tggccgcctc gtccatgagg
      121 tccacggcct tgtccggcag gaagcgatcc gcgatgtagc ggtggctcaa ctgggccgcg
      181 gccaccaggg ccgcgtcctg gatgcgcacg ccgtggtgca gctcgtagcg ctccttgagg
      241 ccgcgcagga tggagatggc gtcctccaca ccgggttctt ccacgaagac gggctggaag
      301 cggcgctcaa gggccgggtc cttctcgacg tgcttgcggt attcgtccag ggtggtggca
      361 ccaatgcagc gcagctcgcc ccgggccagg gccggcttga gcaggttcgc cgcgtccatg
      421 ctgccgccca cggccccggc gcccacgagg aggtgcagct cgtcgatgaa gagcaccacc
      481 tggccttcgg ccttctccac ctcctggatg atgcccttga ggcgttcctc gaattggccg
      541 cggtactggg tccccgccac gagggccccc atgtccaggc ccatgacccg caggcccttc
      601 aggctctcgg gcacgtcccg cttgtggatg cgctgggcca ggccctccac gatggcggtc
      661 ttgcccacgc ccggttcgcc gatcagcacc gggttgttct tggtgcgccg ggagagcacc
      721 tgcatcaccc ggcgcacctc ctcgtcgcgg ccgatgaccg gatccagctt cccggcggca
      781 gccagcgcgg tgtagtcctt ggcgtacttc tccaggctcg cgaaggcctc ttcggccttt
      841 tcgtcgtcca cccgggagcc cttgcgcacc tcgcgaatgg cggcctccag cttcgggcga
      901 tccaggccga agcgctcaag cagcttcttg gcgtccgtgt gggcgttggt cagcgcgagc
      961 agcagggcgt ccgtggcgag gaagcgatcg ccgaggcctc ggccagtgtc gctggctact
     1021 tccaggaaat gccggaaggc gggtccgacc tggggctccg atccgccgac cgcgcggggc
     1081 agcttggcga ccaggtcctc ggcgccgtcg gccagcccct ggatggcctg gggggtgagg
     1141 cccgcccgct ccagcagggg atgcaggccg gcccccggag ctaggagggc caagaggagg
     1201 tgctggggca ccagctccgg gtggtggtcc tggagggccc gctgccgcgc ggtcacgagg
     1261 gcgtcgttgg ctttctgggt gaagggaagg agggacatgg tccacctcga cagcaccatg
     1321 atggatcaaa tatgatgctt tagcactaaa attttcttca taatttgaat acaagacctg
     1381 cgagtgcctt caccccggcg tcatgtcaca ccggcgccgc ccggcccacc ctatcccgga
     1441 accgatcccc gatccccgac cttcaggagc cgcctgtgcg atcccatccc gccatcctcc
     1501 ttctgaccat ccttctgggc gggatgccgc tcccagccca ggccccggcc gcctccgacc
     1561 cgaaggccat catggccaag gcccaggacg acctcatcaa gtcggggcag gcggagcggg
     1621 ccatccgcca gggccagaag gcgccggatt tcgtgctgcc ggacgcccag ggccggccca
     1681 ggcggctgtc cgacctgctc aagaaagggc ccgtcatcct caccttctac cgcggcggct
     1741 ggtgcccctt ctgcaacctc cagctgaaga gctaccaggc ccacctcgcc gaattcaggg
     1801 cccggggcgc cgagctcgtg gcggtctctc cgcagacccc ggacgccacc gtgtccacgg
     1861 cggacaaggc ggcgctcacc tttccggtgc tcagcgatgt gggcaaccag gtggcccggc
     1921 ggtacgggct ggtcttcaag gtgtccgacg aggtggtgcc catctacaag cagttcggca
     1981 tcgacctgga aaagaccaac ggggatgcca gccacgagct gccgatgccc ggcacctacc
     2041 tcatcgggcg cgacggcacg gtgctgctct cccaggtgga ggcggactac acgaagcgca
     2101 tgccggcgga gaccctgctt gccgcgctga agcagggcca gccttagagc gccgttctcg
     2161 gctgcacggc ggcgtgggcc agcagcaggc ccgtcaacag ggcgatggcc acgaagaggg
     2221 cctggaaagc cgtgtccagg cccatcacca cctgcttctg aatgatgaat tcgaggcctc
     2281 ggaaccccag gccccccggc accagcacca tgaggcccgg cagcagcgtg accaccgagg
     2341 gccggtgctg gagccgcgtg tagaggttgc tgcccaggcc cagggcgaag gcgccgaggc
     2401 ccacgccgaa ctgggggccc agcagggcgg cgccctggcg ggtgccgtag aaggccaggg
     2461 cgcaggcggc aaagatccag ggcaggtccg agacccgcgc cttgaagatc accacgaagg
     2521 ccgccgccgc caggaccagc gtgggcagga gggtccaggc gggcaggggg aggggcgtgc
     2581 ccagcagggc ctggtccagc aggggcgccg cgagccgctg gcccagggcc acgccgaagc
     2641 cgagcgacag gaaggtcatg cccgtgtcca cgagtcgggc cgtgcccgcc accaggttgc
     2701 ccgtggccag ctcgttcatg gacaccacca gccgtagccc tggcagcagc acgatgaggc
     2761 ccgccagggt gagcacctgg ggcgagacgt ggggaaaccg gtaggccgcc gccagggaga
     2821 ggaagcccac cagggtgccc gccacgggat gcaccagccg ggaggagccg gccttccggc
     2881 ccagcagcac ggcggtgagg cccaccaggg cgccgatcac cgccgtgagg gccatttccc
     2941 gccaaccgcc gccgaagaag gccgccgccg gggccgagcc caggccgaag caggccacgg
     3001 tcagcagcgc gccccagcgg tccggcgcgg cgatgatccc ccgcacccgc tcccgggcct
     3061 ccggcgcgct gagccggccg gcgatgatcg cgtcggtcgt ctcctgcagg tccgagagct
     3121 tggccaggtt cacgtcgccg gcggggctgc gctggatgaa ggtccagtgc tggccgccga
     3181 ggcccaggga cgcgaaaaag gccgtgggca gcgcgaagaa ctgcccctcc aggcccaggc
     3241 gcgccgagat gtgcgtcagg gcgtcctcga agcgatgcgc ggggatgccg aaggcctggt
     3301 aggcccgacc cagctccagg cagagctcga cctcggccgg cggccccggg ggcgtggagg
     3361 ttggggcgga aagggtggcc atgccccagg gtagccgcgc ccaaatgcca acgtgggcgc
     3421 caacgttggc gcaagggtgg gcgccaacat gggcgccagg gtggacgcca aggtgggcgt
     3481 cctagcgggc ggcctcgtcc gccagggcga ggctggcggt gagccccggc gactcgatgc
     3541 ccaggaggtg taccagaccc ggcacgccat gctgttcctc gcgctggatg aggaaatccg
     3601 gcgcgggctc gccctgggca tgcagcttgg ggcggatgcc ggcgtaggcg ggctgcaggg
     3661 cgccgtccgg cagctccggc cagtactggc ggacttccgc gtagaagctg tcggcgcggc
     3721 ggggatccac gtcgtactcc tcccggtcca cccactccat gtccgggccg aagcgggcct
     3781 ggcctgccag atccagcgtg agatggacgc cgagcccgcc ctgggagggc accgggtaca
     3841 cgaggcggct gaagggcgcc gggccgccca ggctgtagta gttgcccttg gcgaagcgcc
     3901 ggggggcggg cggcagggac tcaggccgag ccccttcgaa ggcgcgcgcc acggcgatgg
     3961 ccccgaggcc cgcgcaggtg gtggcgcgct ccgccaggaa ggtcatgggc tcgtcgccgc
     4021 ccacgtcgaa ggcgaggccc tccggcgtgc gccggccggc gaggaccggg ctcttcaaca
     4081 ccaccgtggc gccggcggcc tcggcgtcca gccggagcgc gcgcatgagg ccgtggctgt
     4141 ccacgatgcc cgtgctggga gagagcaggg cggcggtgca gcggaggcgg ggctccaggc
     4201 cgcgggcttc cgcggccgac agcc
//
LOCUS       DATGWW010000454         4037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_347783, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000454 DATGWW010000000
VERSION     DATGWW010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4037
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347783"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1549)
                     /locus_tag="VK150_06550"
     CDS             complement(<1..1549)
                     /locus_tag="VK150_06550"
                     /EC_number="1.5.1.20"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF006396.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional homocysteine
                     S-methyltransferase/methylenetetrahydrofolate reductase"
                     /protein_id="HLP31003.1"
                     /translation="MAQPPFRQALDEGECFLFDGSTATALHDRGITLQRSFEECNLKA
                     PDLVLAIHGEFLAAGAQVLTSNTWGANRLKLVARGLEGQLRDINQEGVALARRAIQQQ
                     GSRAWVAGCVGPLGVRIEPWGPTSFDEARALFREQAEPLLEAGADLIVLEGFEDLNEI
                     HQALLAVQELGGVPIAALMTTNEDGQALFGAEPDWFIKQLDTWGADLVGLIGGNGPAP
                     HLRLLERLKAVTSKPIVLQPNPGLPNLVDGRLIYGASPEYLGEFAGRALAAGARGVGG
                     CSGTTAAHIRAMRGAFRQERAFIQGGGGFELKPHEQPQPEVPFAYRSRFSLKLAQNEF
                     VHTVELVPPKGMEYDKLVAKTRQCRALGVDAINVPDGPRAMARMSALATALIIEQQVG
                     LETILHYACRDRNLLGMQSDLLGAAGLGLRNILAVTGDPPKLGPYPQATAVFDVDAIG
                     LVNMLKRLNTGLDLGGAGIGKPTSFSVGVGANPVAADLEREKARFRYKVEAGAQWAIT
                     QPVFDADS"
     regulatory      complement(1616..1719)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            complement(1790..3214)
                     /locus_tag="VK150_06555"
     CDS             complement(1790..3214)
                     /locus_tag="VK150_06555"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLP31004.1"
                     /translation="MSFRVLITGFIEWGILAYFLALHLTHLGLILRAFFSIRGYLDEV
                     ETDRLDTAFETTHYKPMTLICPAYNEEAGVVASVNSLISLRYPEFQVVVVNDGSGDAT
                     LERLIAAFKLRPSHRVLRQLLPTAEVKGIYESAYVPNLVVVDKANGGKADALNCGMNL
                     ARYPLVCCMDGDSLLENDSLLRIARPFMDRPDLVASGGVIRPLNGCKVTAMGIRGIHL
                     PESWLARFQIVEYLRAFLFGRVGLASLDTMFIVSGAFGVFRKDLVVQAGGFETATIGE
                     DFELIVRLHRHLREAHRPYHITLVPDPVCWTEVPEDFKMLGRQRNRWQRGMLETLWRH
                     RRMWFNPKYGRVGLFSMPYFLFFEALAPVIEVTGYLAFGWSLWTHSINSAFAILFVYV
                     ALLLGVLNSVISVVLQEISGHRYQGFKAWSLLLFSAVAENFGYRQLTVWWRLKGTFDW
                     VRGKEGWGQMKRKGIGPAPPAPMA"
     gene            complement(3211..>4037)
                     /locus_tag="VK150_06560"
     CDS             complement(3211..>4037)
                     /locus_tag="VK150_06560"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HLP31005.1"
                     /translation="RYHATLAGREAEALKTLYLRLGVLDSLPRRLQHRLATVRAQAAQ
                     EVAAFHLEDHLSLVVPLLDDPVPYVAHLAAQALARSGDLRFARPVMDWVLREERYQRE
                     RLLRVLEGFGPSLLPWLEAHLDSPEADPESWVLFALLAASLRHRESAPRLLQLIHSPS
                     VDIQASALKALAALADPLTYPQIEPLARHGAWPVRAQAAKALGLIGGPDAIPALLALT
                     SDPVYEVRRNAAQGMADLGHAGAEALTWLAEDPAADRFARDIARERLEWADERGHL"
BASE COUNT          627 a         1298 c         1500 g          612 t
ORIGIN      
        1 ggctgtcggc atcaaacacg ggctgggtga tggcccactg ggcgccggcc tccaccttgt
       61 agcggaagcg ggccttctcg cgctccaggt ccgccgccac ggggttggcg cccacgccca
      121 cgctgaacga ggtgggtttg ccgatgccgg caccgcccag gtcgaggccc gtgttcaggc
      181 gcttgagcat gttcacgagg ccgatggcgt ccacgtcgaa gacggcggtg gcctgggggt
      241 agggccccag cttcggggga tcgccggtca cggccaggat gttgcgcagg cccaggcccg
      301 ccgcgcccag gaggtcgctc tgcatgccga ggaggttccg gtcgcggcag gcgtagtgga
      361 ggatggtctc gagtcccacc tgctgctcga tgatgagggc cgtggccagg gccgacatgc
      421 gcgccatggc gcgggggccg tcggggacgt tgatggcgtc cacgccgagg gcgcggcact
      481 ggcgggtctt cgccacgagc ttgtcgtatt ccatgccctt ggggggcacc agctccacgg
      541 tgtggacgaa ctcgttctgg gcgagcttga ggctgaagcg gctgcggtag gcgaagggca
      601 cttcgggctg gggctgctca tggggcttca gctcgaagcc gccgcctccc tggatgaagg
      661 cccgctcctg ccggaaggcg ccccgcatgg cccggatgtg cgctgcggtc gtgccgctgc
      721 agccgcccac gccgcgggcg cctgccgcca gggcccgccc ggcgaactcg cccaggtact
      781 cgggactggc gccgtagatg aggcgcccgt cgacgaggtt gggcaggccg gggttgggct
      841 ggaggacgat gggcttggag gtgacggcct tcagccgctc cagcagccgc aggtgcgggg
      901 cgggtccgtt cccaccgatg aggcccacca gatcggcgcc ccaggtatcc agctgcttga
      961 tgaaccagtc gggctcggcg ccgaagaggg cctggccgtc ctcgttggtg gtcatcaagg
     1021 ccgcgatggg cacgccgccc agctcctgca cggccaggag cgcctggtgg atctcgttga
     1081 gatcctcgaa gccctccagc acgatgaggt cggccccggc ttcgagcagc ggttccgcct
     1141 gctcgcggaa gagcgcgcgg gcctcgtcga aggaggtggg cccccacggc tcgatgcgca
     1201 ccccgagagg ccccacgcag cccgccaccc aggcgcggct gccctgctgt tggatggccc
     1261 gccgggcgag ggcgacgcct tcctggttga tgtctctcaa ctgaccttcg aggccccggg
     1321 ccacgagctt gaggcggttg gcgccccagg tgttggaggt gagtacttga gccccggcgg
     1381 cgaggaactc gccgtggatg gccagcacca ggtccggcgc cttgaggttg cactcctcga
     1441 agctgcgctg gagggtgatc ccgcgatcat gcagggccgt ggccgtgctt ccatcgaaga
     1501 ggaaacattc gccttcgtcg agggcctgcc tgaatggggg ttgagccatg ggatcgcctg
     1561 gaaggggcag tccgttgatc ggcatccagg tcggctcggg tcagtcttga gactttcggt
     1621 atctttcccc cgggcacgcc gggggcagga gttggcacct tgcgttcgca ggttgccaag
     1681 gtttcacagg gccattccct ccacctttct ggataacgct cttggactgc caaagatcga
     1741 gaatccagca tgaatggggc ggaggtctcc gtcaagccgc aggcgcccgt caagccatgg
     1801 gcgctggcgg cgcgggtccg atgcccttgc gcttcatctg gccccaaccc tccttgccgc
     1861 gcacccagtc gaaggtgccc ttcaagcgcc accacaccgt gagctggcgg tagccgaagt
     1921 tctcggccac ggcggagaag agcaggagcg accaggcctt gaacccctgg tagcggtggc
     1981 cgctgatctc ctgcagcacc acggagatca cggaattcag cacgcccagc agcagcgcca
     2041 cgtagacaaa caggatggcg aaggcgctgt tgatggaatg ggtccaaagg gaccagccga
     2101 aggcgaggta gcccgtcact tcgatgaccg gcgccagggc ctcgaagaag aggaagtaag
     2161 gcatggagaa gaggcccacg cgcccgtact tcgggttgaa ccacatccgg cggtgccgcc
     2221 agagcgtttc gagcatgccg cgctgccagc ggttccgctg ccggccgagc atcttgaagt
     2281 cctccggcac ctcggtccag cacacgggat cgggcacgag ggtaatgtgg taggggcgat
     2341 gggcttcgcg caggtggcgg tggagccgca cgatgagctc gaaatcctcg ccgatggtgg
     2401 cggtctcgaa tcctcccgcc tggaccacca ggtccttgcg gaacaccccg aaggccccgc
     2461 tcacgatgaa catggtgtcc agggaggcga ggcccacgcg gccgaagagg aaggcgcgca
     2521 ggtactcgac gatctggaag cgggcgagcc acgattccgg caggtggatg ccccggatgc
     2581 ccatggccgt gaccttgcag ccgttgaggg gacggatcac gccgcccgag gccaccaggt
     2641 cggggcggtc catgaaggga cgggcgatgc gcagcagcga gtcgttctcc agcaggctgt
     2701 cgccgtccat gcagcagacc agcgggtagc gggccaggtt catgccgcag ttcagggcgt
     2761 cggccttgcc gccgttggcc ttgtccacca ccaccaggtt ggggacgtag gcgctttcgt
     2821 agatgccctt cacctccgcc gtgggcaaca gctggcgcag cacgcggtgg ctgggccgca
     2881 gcttgaaggc cgcgatgagc ctctcgagcg tggcatctcc gctgccatcg ttcaccacca
     2941 ccacctggaa ctccgggtag cgcaggctga tgaggctgtt gacgctggcc accacgcccg
     3001 cctcttcgtt gtaggcgggg cagatgagcg tcatgggctt gtagtgggtg gtctcgaagg
     3061 cggtgtccag gcggtcggtc tccacctcgt ccaggtaccc gcggatggag aagaaggcgc
     3121 ggaggatgag gcccaggtgg gtgaggtgga gggccaggaa gtaggccagg atcccccact
     3181 cgatgaagcc cgtgatgagg acgcggaagc tcacaggtgc ccccgctcgt cggcccattc
     3241 caggcgttcc cgggcgatgt cccgggcgaa gcggtcggcg gcgggatcct cggcgagcca
     3301 ggtcagggcc tcggcccccg cgtgtcccag gtcggccatg ccctgggccg cgttgcggcg
     3361 gacctcgtag accgggtcgc tggtcagcgc gaggagggcg gggatggcgt cggggccacc
     3421 gatgagcccc agggccttcg cggcctgggc gcgcacaggc caggcgccgt ggcgggccag
     3481 gggctcgatc tgcgggtagg tgagcgggtc ggcgagggcg gcgagggcct tgagggccga
     3541 ggcctggatg tccaccgaag gcgagtggat gagctgcagc agccggggcg cgctctcgcg
     3601 gtgacggagc gaggccgcca gcagcgcgaa gaggacccag gattcaggat cggcctccgg
     3661 ggaatccagg tgcgcctcca gccagggcag caggctcggg ccgaatcctt ccagcacgcg
     3721 gagcagccgc tcccgctggt accgctcttc ccggagcacc cagtccatca cgggccgggc
     3781 gaaccgcagg tcgccggagc gggccagggc ctgggcggcc aggtgcgcca catagggcac
     3841 gggatcatca aggaggggca ccaccaggct gaggtggtcc tccaggtgga aggcggcgac
     3901 ttcctgggcc gcctgggccc gcaccgtggc caggcggtgc tggaggcggc gcggaaggct
     3961 gtccagcacg ccgagccgga ggtagagcgt cttcaacgcc tccgcctccc ggccggccag
     4021 ggtggcgtgg tagcggg
//
LOCUS       DATGWW010000455         1524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_34265, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000455 DATGWW010000000
VERSION     DATGWW010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34265"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..601
                     /locus_tag="VK150_06565"
     CDS             <1..601
                     /locus_tag="VK150_06565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31006.1"
                     /translation="AAVSHAMLHQMNVASAEWPDGVDEFPKCGLSPVPALHVEPALVG
                     ESPFQMECRLQQVVELGSGPGSGLMLIGEVLAFHVREDCYIDGVLHPNRLDLVGRNGG
                     AYYTRASGTAVFQVPKPAGKPLGYDALPEALKQSRVLTGNNLGQLANSAELPDLAAMA
                     RQPGDPLGAAGLDHAIRRALAAGDLAEAWRLVGLRVTGR"
     gene            complement(611..>1524)
                     /locus_tag="VK150_06570"
     CDS             complement(611..>1524)
                     /locus_tag="VK150_06570"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HLP31007.1"
                     /translation="ERFATVMLFIQTPEGAKPLHGWLGGAGWSRLTHLLLVAAACLAI
                     LGAVNLVSRAVRRAVDDGNEEVTSDAERRAETLGSVLNNAARVVVVAFFLLMTLQEFG
                     VNIGPLVAGAGVAGVALGFGAQSLVKDVISGFFLLMENQFGVGDIVNVDDKHTGTVER
                     MTLRITQLRDSEGRAHFIPNGSIVRVVVLSKDFARALVDVEVSYDADPDRVFQVLLEA
                     GRKLHEDRPEQAVEPLEVKGVESLGASGFVIRTLTKTAPGAQWEVARELRRRILLAFR
                     EAGIEIPYPQRVVHHRGIVGGLPEAGD"
BASE COUNT          228 a          576 c          511 g          209 t
ORIGIN      
        1 cgccgccgtg agccacgcca tgctgcacca gatgaacgtg gccagcgccg agtggcccga
       61 tggggtggac gagttcccca agtgcggcct gtcgccggtg cccgcgctgc acgtggagcc
      121 cgccctggtg ggcgagagcc ccttccagat ggaatgccgc ctccagcagg tggtggaact
      181 gggctccggc cctggctcgg gcctcatgct catcggcgag gtgctggcct tccacgtgcg
      241 ggaggactgc tacatcgacg gcgtcttgca ccccaaccgc ctcgacctcg tgggccggaa
      301 cgggggcgcc tactacaccc gcgccagcgg cacggccgtc ttccaggttc ccaagcccgc
      361 gggcaagccc ctgggctacg acgcccttcc cgaggccctg aagcagagcc gcgtcctcac
      421 cggcaacaac ctgggccagc tggccaacag cgccgagctg cccgacctcg cggccatggc
      481 ccggcagcct ggcgatcccc tcggggccgc gggcctcgat cacgccatcc gccgggccct
      541 ggcggcgggc gatctggccg aggcctggcg gctggtcggc ctgcgcgtca cggggcgctg
      601 agccgccgcg tcagtcccca gcttcgggaa gtccgcccac gataccccgg tgatgcacca
      661 cccgctgcgg gtaggggatc tcgatgccgg cctcgcggaa ggcgaggagg atgcgccgcc
      721 gcagttcccg ggccacttcc cactgggcgc cgggcgcggt cttcgtaagg gtccggatga
      781 cgaagccgct ggcgcccagg gattcgacgc ccttcacctc caggggctcg acggcctgct
      841 cgggccggtc ctcgtgcagc ttccggcccg cctccagcag cacctggaac acccggtcgg
      901 ggtcggcgtc gtagctcacc tccacatcca ccagggcccg ggcgaaatcc ttggagagca
      961 ccaccacccg cacgatggag ccgttcggga tgaagtgggc gcggccctcc gaatcccgca
     1021 gctgggtgat gcgcagggtc atgcgctcca cggtgccggt gtgcttgtcg tccacgttca
     1081 cgatgtcgcc cacgccgaac tggttctcca tgagcaggaa gaagccgctg atgacatcct
     1141 tcaccaggct ctgcgcgccg aagcccaggg ccacgcccgc cacgcccgcg ccggcgacga
     1201 ggggcccgat gttcacgccg aactcctgca gcgtcatcag caggaagaag gccaccacca
     1261 ccacccgggc ggcgttgttg agcacagagc ccagggtctc cgcccggcgc tcggcgtcgg
     1321 aggtcacctc ctcgttgccg tcgtccaccg cccggcgcac ggcgcgggac acgaggttca
     1381 ccgccccgag aatggccagg caggccgcgg ccaccagcag gaggtgggtc aggcgcgacc
     1441 agcccgcccc gcccagccag ccatgcaggg gctttgcccc ctcgggggtc tgaatgaaca
     1501 acatcaccgt tgcgaaccgt tcca
//
LOCUS       DATGWW010000456         1962 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_81292, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000456 DATGWW010000000
VERSION     DATGWW010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81292"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1962
                     /locus_tag="VK150_06575"
     CDS             <1..>1962
                     /locus_tag="VK150_06575"
                     /inference="COORDINATES: protein motif:HMM:NF016844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HLP31008.1"
                     /translation="NRNNRLKKLLELKAPDVIVRNEKRMLQEAVDALFENGKRGRLLR
                     GVSNRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKLHQCGLPKKMALE
                     LFKPFIFNRLEHKGHAATIRQAKEMVEQGVPEVWDVLDEVIQNHPVLLNRAPTLHRLG
                     IQAFQPVLVEGKAIRLHPLVCTAFNADFEGDQMAVHVPLSPMAQIEAKVLMMSTQNIL
                     NPANGRPNVVPSQDIVLGGYYLTKKRFGRKGEGMTFANVNDVVSAHEAGVVDTHTIIQ
                     LRYTGEWVDTEAWHAKDPKKNSEQEVFEAPAETVVNQIKTTTVGRVLFNRALPAELPF
                     INGLLKKEGLLSLVNRAYKLNGPEVTIRMLDAMKDTGFQWAMRAGVSVGIDDLVVPDS
                     KGKLLKGASDEVRAIEKESYEGRLDASTRYNRILEVWGKTSDQVAADMMKELEKRNET
                     GTFLNSIYILADSGARGSKTQIRQVAGMRGLMARPSGDIIETPITANFKEGLSVLDYF
                     ISTHGARKGLADTALKTADSGYLTRKLVDVAQDVIVNEDDCETINGIEVEAIVNSDGT
                     IRARLRDRIMGRVCLDDIVDPYDASKTIAPSGTLISEELAFKIETSGIPKVKIRSTLT
                     CEARRGICAKCYGLNLSTGRLVDLGEAVGV"
BASE COUNT          396 a          697 c          579 g          290 t
ORIGIN      
        1 caaccggaac aaccgcctca agaagctcct ggagctgaag gcccccgatg tcattgtgcg
       61 caacgaaaag cgcatgctgc aggaggcggt ggacgccctg ttcgagaacg gcaagcgcgg
      121 ccgcctcctg cgcggcgtct ccaaccgccc cctgaagtcc ctcagcgacg ccctcaaggg
      181 caagcagggc cggttccgcc agaacctgct cggcaagcgt gtggactact cgggccgttc
      241 cgtcatcgtg gtgggtcccg acctcaagct gcaccagtgc ggcctgccca agaagatggc
      301 gctcgagctc ttcaagccct tcatcttcaa ccggctcgag cacaagggcc acgccgccac
      361 catccgccag gccaaggaga tggtcgagca gggcgtgccc gaggtgtggg acgtgctgga
      421 cgaggtgatc cagaaccacc cggtgctgct gaaccgcgcc ccgaccctgc accgcctggg
      481 catccaggcc ttccagccgg tgctggtgga aggcaaggcc atccgcctgc accccctggt
      541 ctgcaccgcc ttcaacgctg acttcgaagg cgaccagatg gctgtgcacg tgcccctcag
      601 ccccatggcc cagatcgagg ccaaagtgct gatgatgtcc acccagaaca ttctcaaccc
      661 cgccaatggc cgccccaacg tggtgcccag ccaggacatc gtgctcggcg gctactacct
      721 gaccaagaaa cgcttcggtc gcaagggcga gggcatgacc ttcgccaatg tgaacgatgt
      781 ggtctcggcc cacgaggcgg gcgtcgtgga cacccacacc atcatccagc tgcgctacac
      841 cggcgagtgg gtggacacgg aagcctggca cgccaaggac cccaagaaga actccgagca
      901 ggaagtcttc gaggcccccg ccgagacggt cgtcaaccag atcaagacca ccaccgtggg
      961 ccgcgtgctc ttcaatcgcg ccctgcccgc cgagctgccc ttcatcaacg gcctgctcaa
     1021 gaaggagggt ctgctctccc tcgtgaaccg cgcctacaag ctgaacggcc ccgaagtgac
     1081 gatccgcatg ctggacgcca tgaaggacac gggcttccag tgggccatgc gcgccggcgt
     1141 gtccgtgggc atcgacgacc tcgtcgttcc cgactccaag ggcaagctcc tcaagggtgc
     1201 ctcggatgaa gtccgcgcca ttgagaagga gtcctacgag ggccgactcg acgcgtccac
     1261 gcgctacaac cgcatcctcg aagtgtgggg caagaccagc gaccaggtcg ccgcggacat
     1321 gatgaaggaa ctggaaaagc gcaacgaaac cggcaccttc ctcaattcca tctacatcct
     1381 cgcagattcc ggcgcccgtg gttccaagac ccagatccgc caggttgccg gcatgcgcgg
     1441 cctcatggcc cgccccagcg gcgacatcat cgagaccccg atcacggcca acttcaagga
     1501 aggcctcagc gtcctcgact acttcatctc gacccacggc gctcgcaagg gcctcgcgga
     1561 caccgcgctg aagacggccg actccggcta cctcacccgc aagctggtgg acgtggccca
     1621 ggacgtcatc gtcaacgagg acgactgcga gaccatcaac ggcatcgagg tggaagccat
     1681 cgtcaacagc gacggcacca tccgggcccg gctgcgcgac cgcatcatgg gccgcgtctg
     1741 ccttgatgac atcgtggatc cctacgacgc gagcaagacc atcgcgcctt cgggcaccct
     1801 gatttccgaa gagctggcgt tcaagatcga gaccagcggc atccccaagg tcaagatccg
     1861 ctccaccctc acctgcgaag cccgccgcgg catctgcgcc aagtgctacg gtctgaacct
     1921 cagcaccggc cgcctggtgg atctcggcga ggcggtcggc gt
//
LOCUS       DATGWW010000457         1614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_348259, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000457 DATGWW010000000
VERSION     DATGWW010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348259"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            353..>1614
                     /locus_tag="VK150_06580"
     CDS             353..>1614
                     /locus_tag="VK150_06580"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31009.1"
                     /translation="MVQNTLALGAEAVGCAAFDAGIKGAFGYPGTPSTEGFEFVEAMI
                     QADPARVARWAANEKVAYDLALGMSYAGFRTLVTMKHVGLNVAMDAYANSALTGVRGG
                     LVLLVADDPGMHSSQNEQDSRRLAKFAWLPVLEPSTVQECYDFTCRAFELSERLQLPV
                     MVRLVTRLAHCRAALVRREVLAPTGLGVAPKETIQDWVLIPSNARRRYVDLLAKQAGM
                     VEDLAPMNRLVAGTSRRGVALAGMGRAYFDQLALEHPELRAMPRLEVAAYPMDPALEP
                     AFLAQVDEVFVFEEDYPVLEERLTFQRAGKIHGRLDGSLPRTGELTPRLLKKALGLAS
                     ADGKAASTLELPIRAPRFCDGCGHVDAYEAMQEALRNLGVPDARVFGDIGCYTLAAQE
                     PMAAIHAVVEMGASISMAVGAALSGQTPA"
BASE COUNT          274 a          568 c          508 g          264 t
ORIGIN      
        1 agtgcaaatg cttcttttat ccatgcctgc atggttattc ggcatcaatc taggaccaat
       61 ccgtgacatt tcagattatt tttcaatctt cctattatta acaacttggt acagagaaaa
      121 tcaggaaaat acagtgataa atttcaactg tccgtaaacg caacccgcac aaagtggaca
      181 aagttgtgac cttgggcact ggaaaggttc ccggaattct cggccctgtc aaaacgcccc
      241 caggaggtcc cctgtgacag ggcgcacagc gaccccgggc atcgcccccg tgtgaccccc
      301 gacacgcggc ctgatccaca tactcatctc ttgtaaaagg ctggaggttc tcatggttca
      361 aaacaccctc gcgctcgggg cggaggcggt cggatgcgcc gccttcgatg ccggcatcaa
      421 aggcgcgttc gggtatccgg gcaccccgtc cacggaaggc ttcgaatttg tcgaggccat
      481 gatccaggcg gacccggcgc gcgtggcccg ctgggccgcc aatgagaagg tggcctacga
      541 cctggccctg ggcatgagct acgcgggttt ccgcaccctc gtgaccatga agcacgtggg
      601 gctgaacgtc gccatggacg cctacgccaa ctccgcgctg accggcgtcc ggggcgggct
      661 ggtgctcctg gtggccgacg accccggcat gcacagcagc cagaacgagc aggacagccg
      721 ccgcctggcc aagttcgcct ggctgcccgt ccttgagccg agcaccgtcc aggaatgcta
      781 cgacttcacc tgccgcgcct tcgagctgtc cgagcggctc cagctgcccg tgatggtgcg
      841 gctggtcacc cggctggccc actgccgggc cgccctggtc cggcgcgagg tgctcgcccc
      901 cacggggctg ggcgtggcgc cgaaggagac catccaggac tgggtgctca tcccctccaa
      961 tgcccgccgc cgctacgtgg acctgctggc caagcaggcc gggatggtcg aggacctggc
     1021 ccccatgaac cgcctcgtgg ccggcaccag ccgccgcggg gtcgccctgg ccggaatggg
     1081 gcgcgcctac ttcgaccagc tggccctgga acatcccgag ctgcgggcga tgccccggct
     1141 ggaggtggcc gcctacccca tggacccggc gctcgagccg gccttcctcg cccaggtgga
     1201 cgaggtgttc gtctttgaag aggactaccc ggtgctggag gagcgcctga ccttccagcg
     1261 ggctgggaag atccacggac gcctggacgg ctccctcccg cgcaccggcg agctgacccc
     1321 gcggctgctc aagaaggccc tgggcctggc ctccgccgac ggcaaggccg ccagcaccct
     1381 cgagctcccc atccgggcgc cccgcttctg cgacggctgc ggccacgtgg acgcctacga
     1441 agccatgcag gaggccctcc ggaacctcgg cgtccccgat gcccgcgtgt tcggcgacat
     1501 cggctgctac accctggcag cccaggagcc catggccgcc atccacgcgg tggtggagat
     1561 gggcgccagc atcagcatgg ccgtgggcgc cgccctgtcg ggccagactc ccgc
//
LOCUS       DATGWW010000458         3772 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_259451, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000458 DATGWW010000000
VERSION     DATGWW010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3772
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259451"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1164)
                     /locus_tag="VK150_06585"
     CDS             complement(<1..1164)
                     /locus_tag="VK150_06585"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HLP31010.1"
                     /translation="MASKLPSPSSPTRRWLRRVFWAMTALVTVGAVTLAVSWSVLSRD
                     ADSFLTLFALRVPKTITKVLDQSGNVIGIFAEEHRVVIPYGDIPKAFVNALVATEDTD
                     FWNHSGISPRGLMRAGVNFVTSFGRRREGASTLTMQLIRTVTSKRQIRLDRKLKEMIL
                     ARKLEKAYSKKQIMEMYANEVYFGGGRYGIEAAAEFYFGKSAPQLAPEECAMLAGLVQ
                     SPNWYNPYNPDPKSRVAAKARRNHVLVRMAKEGYLKPQEASQLIEKPIRLARENAQEE
                     AVAPYVVEEVRKYLYEKYGRDQVLNGGLEVTTTVDSFWQQAANDAVRTGLKAVDRRRG
                     FRKESVQFVSDPETTQLNGWKRYFEPGDSVRGVILGWKAGKAQVRIGKVMLDVP"
     gene            1193..2071
                     /locus_tag="VK150_06590"
     CDS             1193..2071
                     /locus_tag="VK150_06590"
                     /inference="COORDINATES: protein motif:HMM:NF039482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HLP31011.1"
                     /translation="MPQRLILVAKVKSPHLGSTLREALPVFLDRGWNITGEPGLEEAW
                     IQAGLDPARLTVDLNLGTDEAPADLCLVLGGDGTLLYAARRVGQRGTPILGINLGSLG
                     FLTAHPVSGAKNAVETFFAGGLVPDVRPMLEVELWRQGSLLARQTVLNDAVVAKGALA
                     RIMDLRLQIGEQDAGPMKADGLIVATPTGSTAYALSAGGPIMHPSLEAFVIAPICPHT
                     LTLRPLVVPAARQIAITLMDAEEAHLTLDGQIGHRVLPGDEVRLRLAGTRITLLQQPG
                     LDFFALLQQKLHWGDR"
     gene            2260..3660
                     /gene="vorB"
                     /locus_tag="VK150_06595"
     CDS             2260..3660
                     /gene="vorB"
                     /locus_tag="VK150_06595"
                     /inference="COORDINATES: protein motif:HMM:NF005507.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate dehydrogenase subunit
                     VorB"
                     /protein_id="HLP31012.1"
                     /translation="MALKERPKPFLLPEYCKGCGRCLDACAKDCITLSDQINPLTGLI
                     PVELDLSNCNACGLCMDACPEPYGLRPAHEGEIQEFELEDPAKLFGVKPSEAPEPVDI
                     PSEVLPLPRTEPLVIKGTYASALGALLAGCRHVYGYPITPSTEGAELMAKFLPKLDGT
                     FIQAVSEVAAVNMMYGTAGAGLPTMTFTSSPGFSLMLEGVSYMIGAELPGVFVDVMRG
                     GPGLGNIAPEQSDIKLACHGLGHGNTHAITLAPSTPQEMLDLTMLAFELSFKYRNPVV
                     LLCDGYLGQMTGKVQLPESMIKPGIPKWAVYGDLMHRKNVITSIFLTESDLEAHNHHL
                     NAKYDAMKAEARAESFLCDDAEVVLIACNTPARTAKGAVQDLRNMGIKAGLFRPITLW
                     PFPVEDLKKAIHGAQRIVVVEASAGQLEDEVRLALSRAGVRQFPEIESVRRMGGVLPQ
                     QNEIMTRVLGPKEVLA"
BASE COUNT          591 a         1366 c         1201 g          614 t
ORIGIN      
        1 cggcacgtcc agcattacct tgccgatgcg tacctgggcc ttgccggcct tccagccgag
       61 gatcaccccc cgcacgctgt cgccgggttc aaagtagcgc ttccagccgt tcagctgggt
      121 ggtctcggga tcgctcacga actgcacgga ttcctttcgg aaaccccggc ggcggtccac
      181 cgccttcagc cccgtgcgca cggcgtcgtt cgccgcctgc tgccagaagc tgtccacggt
      241 ggtggtgact tccaggccgc cgttgagcac ctggtcgcgg ccgtacttct catagagata
      301 cttccgcacc tcctccacca cgtagggcgc cactgcttct tcctgggcgt tctcgcgagc
      361 caggcggatg ggcttctcga tgagctgact ggcctcctgg ggcttgaggt agccctcctt
      421 ggccatgcgc acgagcacgt ggttccgccg ggccttggcc gccacgcggg acttgggatc
      481 ggggttgtag gggttgtacc agttcgggct ctgcaccagg cccgccagca tggcgcactc
      541 ctccggcgcc aactgggggg cgctcttgcc gaagtagaac tccgccgccg cctcgatgcc
      601 gtagcgcccg ccgccgaagt acacctcgtt ggcgtacatc tccatgatct gcttcttgga
      661 gtaggccttc tccagcttgc gggcgaggat catctccttc agcttgcggt ccagccggat
      721 ctgccgcttg gacgtcaccg tgcggatgag ctgcatggtg agggtggagg ccccctcccg
      781 gcgccttccg aagctggtca cgaagttcac ccccgcccgc atgagccccc tgggggagat
      841 gccgctgtgg ttccagaaat ccgtatcctc ggtggccacg agggcattca cgaaggcctt
      901 ggggatgtcg ccgtagggga tcaccacccg gtgttcttcg gcgaagatgc cgatgacgtt
      961 gccgctctgg tcgagcactt tcgtgatggt cttcggcacg cggagggcga acagcgtgag
     1021 gaagctgtcg gcgtcgcggg acagcaccga ccaggacacg gccagggtga cggccccgac
     1081 ggtcaccagg gccgtcatgg cccagaagac gcgccggagc caccgtcggg ttggcgagga
     1141 gggggagggc agcttggagg ccatggcccc aggatagcgt tagagtggtg ccatgcccca
     1201 gcgactcatc ctcgtggcca aggtcaagtc cccgcacctg ggttccaccc tgcgcgaagc
     1261 gctgccggtt ttcctggatc gcggttggaa catcacgggc gaaccgggcc tcgaggaagc
     1321 ttggatccag gccggcctgg accccgcccg gctgacggtg gatctgaacc tgggtaccga
     1381 tgaggcgccg gcggacctgt gcctggtgct gggcggcgac ggcaccctgc tctacgccgc
     1441 gcggcgcgtg ggccagcggg gcacgcccat cctcggcatc aacctgggct ccctcgggtt
     1501 cctcacggcc cacccggtct ccggcgcgaa gaatgccgtg gagaccttct tcgcgggcgg
     1561 cctggtgccg gacgtgcggc ccatgctcga ggtcgagctc tggcgccagg gctccctcct
     1621 ggcccgccag accgtgctga acgacgccgt cgtcgccaag ggcgcgctgg cccgcatcat
     1681 ggacctgcgg ctgcagatcg gcgaacagga cgcggggccc atgaaggccg acggcctcat
     1741 cgtggccacg cccacgggct ccacggccta cgcgctctcc gcgggcggcc ccatcatgca
     1801 ccccagcctc gaggccttcg tcatcgcccc catctgcccc cacacgctga cgctgcggcc
     1861 cctggtggtg ccggccgccc gccagatcgc catcacgctg atggacgccg aggaggccca
     1921 cctcacgctc gacgggcaga tcgggcaccg ggtgctgccc ggcgacgagg tgcggctccg
     1981 gttggccgga acccggatca ccctgctgca gcagcccggg ctggacttct tcgccctgct
     2041 ccagcagaag ctgcactggg gcgaccggta gggtctccag attccagcct ccgcccccgc
     2101 gacccccggt ctgtcccccg cagaccgccg acccgaacct ccattcccga cccaatggtc
     2161 ggtggtggtc tgcgccgttc catgcttgtg accacaggca cacggggcga gggggacact
     2221 tcaccccagg taggacctgc gtccctgcat ggaggcccca tggccctcaa agaacgaccg
     2281 aaacccttcc ttctgccgga gtattgcaaa ggctgcggcc gatgccttga tgcctgcgcc
     2341 aaggattgca tcacgctcag cgaccagatc aacccgctca cgggcctgat cccggtggag
     2401 ttggacctgt ccaactgcaa tgcctgcggc ctgtgcatgg acgcctgccc cgagccttac
     2461 ggcctgcggc ccgcccacga gggcgagatc caggaattcg agctggagga ccccgcgaag
     2521 ctcttcggcg tgaagcccag cgaggctccc gagcccgtgg acatcccctc tgaagtgctg
     2581 cccctgcccc gcacggagcc cctggtcatc aagggcacgt acgcctcggc cctgggcgcg
     2641 ctcctcgcgg gctgccgcca cgtctacggc taccccatca ccccctccac cgaaggcgct
     2701 gagctgatgg cgaagttcct gcccaagctc gacggcacct tcatccaggc tgtctctgaa
     2761 gtggccgcgg tgaacatgat gtacggcacc gccggcgccg gcctgcccac catgaccttc
     2821 acctcctcgc cgggcttcag cctgatgctg gaaggcgtgt cctacatgat cggcgcggag
     2881 ctcccgggcg tcttcgtgga cgtcatgcgc ggcggcccgg gcctgggcaa catcgccccc
     2941 gagcagtccg acatcaagct ggcctgtcac ggcctcggcc acggcaacac gcacgccatc
     3001 accctggcgc cctccacgcc ccaggagatg ttggacctca ccatgctggc cttcgagctc
     3061 agcttcaagt accgcaaccc ggtggtgctg ctgtgcgacg gctacctggg ccagatgacc
     3121 ggcaaggtgc agctgcccga aagcatgatc aagcccggca tcccgaagtg ggcggtctac
     3181 ggcgacctca tgcaccggaa gaacgtcatc acgtcgatct tcctcaccga gagcgacctc
     3241 gaggcccaca accaccacct caacgccaag tacgacgcga tgaaggctga agcccgcgcc
     3301 gagtccttcc tctgcgacga cgccgaggtg gtgctcatcg cctgcaacac cccggcccgc
     3361 acggccaagg gcgcggtgca ggacctgcgc aacatgggca tcaaggccgg cctcttccgg
     3421 cccatcaccc tctggccctt ccccgtggag gacctgaaga aggccatcca cggcgctcag
     3481 cgcatcgtcg tggtcgaggc cagcgccggg cagctggagg atgaggtccg cctcgccctc
     3541 agcagggccg gcgtccgcca gttccccgag atcgagtcgg tccgccgcat gggcggcgtg
     3601 ctgccccagc agaacgagat catgacccgg gtcctgggtc cgaaggaggt gctcgcatga
     3661 gcaaggccag cgtcttctac gacaagttcg agcgccactc ccacggcgag ggcctcaagg
     3721 gccacgccac ccactactgc cccggctgcg gccacgggct ggtgcacaag tt
//
LOCUS       DATGWW010000459         2883 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_81596, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000459 DATGWW010000000
VERSION     DATGWW010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81596"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VK150_06600"
     CDS             <1..272
                     /locus_tag="VK150_06600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31013.1"
                     /translation="DLEAALKVMDALLRAQPGDADLRARAARLHLALCAAHAGQAKWD
                     EAREDLLRGRALFPSDKTWQARLKLLDRVKTLPKPQQAAWIPLLG"
     gene            complement(269..1423)
                     /locus_tag="VK150_06605"
     CDS             complement(269..1423)
                     /locus_tag="VK150_06605"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HLP31014.1"
                     /translation="MNPLFAFDDAQCRSLAEAHGTPCFAYSGAVAEAQFRALREVLPS
                     RVRLAYAVKANPHPKLLARFASLGASFDCASIGELERVETLGLPPGRTFFAGPGKREA
                     ELRKALALGVRVQAEGFEDLARLDALATGELAVNLRVHPAFDIDEGNRIIGGSGPSAF
                     GVDEEDVPGLLRRAASLRHVRIRGLHVFAASNQRDASKLIAIHGAVLDLAKRLHEAHG
                     LVFEQIDLGGGLGVPYAPEESPLDLAALGRGLSGLLARHAWFTGEVILEPGRFLAGPC
                     GVYLARVMRIKESRGTRFAILEGGINHLIRPLLTGEPFPVKAVGRGEGTIPYTLAGPL
                     CTSLDRLGEVALPDLRAGDLLAFGTTGAYGLNEGMTHFLSHPVPPEAWVD"
     gene            complement(1491..2540)
                     /locus_tag="VK150_06610"
     CDS             complement(1491..2540)
                     /locus_tag="VK150_06610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31015.1"
                     /translation="MSASPNYFRTLKPISVQRLLLALAQRSLGLQEVKGFLAEQPNAL
                     QDLLALKVIREDGERFHLNFALYTKDDQIRIRKVVGPYADSLAKALLARKENFHAALG
                     SYDVPGVDPRELSFLLLGCISLDWDGLDLTAEQGYRAATGQHPDGAYVPHAEEVGSLP
                     LKGIYWGSRTSEEEGCWFTSFGDDETRRLTPSNDHAGSMFRMMLALRESPRSMDELGR
                     LPGFDRAEVEALMPILKAYGWVETRGTVIRVRIPVLVRKDEPMVNRVRALGRETISAW
                     LRQHYPALKAELGELSYMRSGVPFPEGFTMIWHYLFGETNRRLVAAGMFADPYEASRP
                     FKGSLPMIAAWQINH"
     gene            complement(2684..>2883)
                     /locus_tag="VK150_06615"
     CDS             complement(2684..>2883)
                     /locus_tag="VK150_06615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31016.1"
                     /translation="FMPLPESAKADPLAFCLTLRDEAKVVLIPGLAFGEGGRGHARLS
                     FAATPEQLQEGVRRLAPYWKV"
BASE COUNT          525 a          981 c          924 g          453 t
ORIGIN      
        1 gtgacctgga ggcggccctg aaggtcatgg acgcgctgct gcgcgctcag cccggcgatg
       61 cggacctgcg ggcccgcgcg gcgcgcctgc acctcgccct ctgtgccgcc cacgcgggcc
      121 aggccaagtg ggatgaggcc cgggaagacc tgctccgcgg ccgcgccctc ttcccgtccg
      181 acaagacctg gcaggcccga ctcaagctgc tggaccgcgt gaagaccctg cccaaacccc
      241 agcaggccgc ctggatcccc ctgctcggct aatccaccca cgcttccggc ggcaccgggt
      301 ggctcaggaa atgggtcatg ccctcgttca ggccgtaggc ccccgtggtg ccgaaagcca
      361 gcaggtcgcc ggcgcgcagg tccggcagcg ccacctcacc gaggcggtcc aggctggtgc
      421 agagcggccc ggccagcgtg tagggaatgg tgccctcgcc ccgacccacg gccttcaccg
      481 ggaagggctc accggtgagc aggggtcgga tcaggtggtt gataccgccc tccaggatgg
      541 cgaacctcgt gccgcggctt tccttgatcc gcatcacccg cgccaggtag acgccgcagg
      601 gacccgccag gaagcgcccg ggttccagga tcacttcccc ggtgaaccag gcatgccgcg
      661 ccagcaggcc ggacaaaccc cggcccagcg cggccaggtc cagcggggat tcttccggcg
      721 cgtagggcac gcccaggcca ccgcccaggt cgatctgctc gaaaaccagc ccgtgggctt
      781 catgcaatcg cttcgccagg tccagcaccg caccgtggat ggcgatcagc ttggaggcgt
      841 cgcgctggtt gctggcggcg aagacatgca ggccccggat gcgcacatgc cgcaggctcg
      901 cggccctccg caggagcccc ggcacatcct cttcgtccac cccgaaagcc gacggaccgc
      961 tgccgccgat gatgcggttg ccctcgtcga tgtcgaaagc ggggtgcacc cgcaggttca
     1021 cggccagctc ccccgtcgcc agggcatcca gccgcgccag gtcctcgaag ccctccgcct
     1081 gcacccggac gcccagggcc agggccttcc ggagctccgc ctcgcgcttg cccggccccg
     1141 cgaagaaggt gcgccccggc ggcagcccca gagtctccac ccgctccagc tcgccgatgg
     1201 aggcgcagtc gaagctggcg cccagggacg cgaagcgcgc cagcagcttc ggatggggat
     1261 tggccttcac cgcgtaggcg aggcgcaccc gggacggcag cacctcgcgc agggcgcgga
     1321 actgggcctc ggccacggcg cccgaatagg cgaagcaggg cgtgccatgg gcctccgcga
     1381 gggagcggca ctgggcatcg tcaaaggcga acaggggatt catttgggac tcatccaatc
     1441 gctgtgtggc aacctaaccg aggtcacccc gggggggcga ggattttcat ttagtggttg
     1501 atctgccatg ccgcaatcat gggcagagag cccttgaagg gcctggatgc ctcgtaggga
     1561 tccgcgaaca tcccggcagc gactaggcgc cgattggttt ctccgaaaag gtagtgccaa
     1621 atcatggtga atccttccgg aaaaggaacc cccgagcgca tataactcag ctcgcccagt
     1681 tctgccttca gcgccggata gtgctgccga agccaggcag agatggtttc tcggcccaac
     1741 gcgcggactc ggttcaccat gggttcgtcc ttcctcacca ggactggtat ccggacccga
     1801 atcacggtcc cccgggtctc cacccaccca tacgccttca aaatcggcat aagggcctcc
     1861 acttcggccc ggtcgaatcc cgggagccga cccaactcgt ccatcgaacg aggagattcg
     1921 cggagcgcga gcatcatcct gaacatcgat ccggcatggt cattcgatgg ggtcaagcgc
     1981 cgggtctcgt cgtcgccaaa ggaggtgaac cagcagcctt cctcctcgct cgtgcggctg
     2041 ccccagtaga ttcccttcag gggcaaggag ccgacttcct cagcgtgggg tacataggct
     2101 ccgtcggggt gttgaccggt agcggcccgg tagccctgtt cggccgtgag gtcgagacca
     2161 tcccaatcga ggctaatgca gccgagaaga aggaaggaca attctctggg gtccaccccc
     2221 ggaacatcgt aggagcccag cgccgcgtgg aaattctcct ttcgcgccag caatgccttg
     2281 gcgagtgaat cggcgtaagg ccccacgacc ttgcggattc tgatctggtc atccttggtg
     2341 tagagcgcaa agttgagatg gaatcgctca ccatcctctc ggatcacctt caaggccagc
     2401 aagtcctgca gcgcattcgg ctgttccgcc agaaagcctt taacctcctg caagccaagc
     2461 gaacgctgag ccagcgccaa caggagcctc tgcacggata tgggcttaag cgtccggaaa
     2521 taattgggtg aggccgacat cgatatggat ccgacaatgg agaccctcaa cggtggcgtt
     2581 gattgggccg agagacaaat cgccaggcca caggcgaacc cgtacctgaa tagcaatcga
     2641 accatgttgt ctcctccatg tgtgccggtg gtggaagtcg ggttcagacc ttccagtacg
     2701 gcgccagccg ccgcacgcct tcctgcagct gctccggggt ggcggcgaag ctgaggcggg
     2761 cgtggccgcg gccgccttcg ccgaaggcca ggcctgggat caacacgacc ttggcctcat
     2821 cacgcaatgt gaggcagaag gccaggggat cggccttcgc ggattcgggc aggggcatga
     2881 agt
//
LOCUS       DATGWW010000460         1698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_259536, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000460 DATGWW010000000
VERSION     DATGWW010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259536"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..902)
                     /gene="recA"
                     /locus_tag="VK150_06620"
     CDS             complement(<1..902)
                     /gene="recA"
                     /locus_tag="VK150_06620"
                     /inference="COORDINATES: protein motif:HMM:TIGR02012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HLP31017.1"
                     /translation="MDDNKRKALSAALSQIEKQFGKGSVMRMGDNTAERDIQVVSTGS
                     LGLDIALGVGGLPRGRIVEIYGPESSGKTTMTLQVIAEAQKLGGTCAFVDAEHALDPQ
                     YAKKLGVNIDDLLVSQPDTGEQALEIADMLVRSSAVDVVIIDSVAALTPKAEIEGEMG
                     DSHMGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGNPETTTGGNALKFY
                     ASVRLDIRRIGAIKKGDEVIGNETRVKVVKNKVAPPFKEAEFEILYGEGVSRQGEVID
                     LGVNANIVEKSGAWYSYKGNRIGQG"
     gene            complement(993..1571)
                     /gene="thpR"
                     /locus_tag="VK150_06625"
     CDS             complement(993..1571)
                     /gene="thpR"
                     /locus_tag="VK150_06625"
                     /inference="COORDINATES: protein motif:HMM:TIGR02258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HLP31018.1"
                     /translation="MLKLRLFFALWPDDPVRIAVAKAARTALTPCGGRPMAVPNYHIT
                     LAFLGDVPVDRIDCLYRLAEGLPGEPFELRLDTFGFFERARVVWLGPSEEPPALADFQ
                     ARLNQALPRCDLVPEGRPYHPHLTLLRNARRGPDVTTTAPIPWSVKDFALVRSVPAEE
                     GSGYQVLRRWPLTSNEGRGSRSEEEKTLPPRT"
BASE COUNT          265 a          532 c          607 g          294 t
ORIGIN      
        1 ccctggccga tgcgattgcc cttgtagctg taccaggcgc cggacttctc gacgatgttg
       61 gcgttgacgc cgagatcgat gacctcgccc tggcgggaga cgccttcgcc ataaaggatc
      121 tcgaactccg cttccttgaa cggcggggcc accttgttct tcaccacctt gacgcgggtc
      181 tcgttgccga tgacctcgtc gcccttcttg atggcgccga tgcggcggat gtcgaggcgc
      241 accgaggcgt agaacttgag cgcgttacca ccggtggtgg tctcggggtt gccgaacatg
      301 acgccgatct tcatgcggat ctggttgatg aagatgacca gcgtgttgga acgcttgatg
      361 ttggcggtga gcttgcgcag ggcctgggac atgaggcgcg cctggagacc catgtgggag
      421 tcgcccatct cgccttcgat ttcggccttg ggggtgagcg cggccacgga gtcgatgatc
      481 acgacgtcca cggcgctgga gcgcaccagc atgtcggcga tctcgagggc ctgttcgccg
      541 gtgtcgggct gcgacaccag caggtcgtcg atgttgacgc ccagcttctt ggcgtactgg
      601 gggtcgaggg cgtgttccgc gtccacgaag gcgcaggtgc cgcccagctt ctgggcctcg
      661 gcgatgacct gcagggtcat ggtggtcttg ccggaggatt ccggaccgta gatctccacg
      721 atgcgcccgc gcggcaggcc gcccacgccc agggcgatgt cgaggcccag agagccggtg
      781 gagacaacct ggatgtcgcg ctcggcggtg ttatcgccca tgcgcatgac ggagcccttg
      841 ccgaactgct tctcgatctg gctgagggcc gcggaaaggg ccttacgctt gttgtcgtcc
      901 attgattcct cccggaaatt tcgtatcgcc gacgtccgtg ccggcgaatg gaagcgggca
      961 ttattccaga tcgagggccg gggagcgagg gtctaggttc gagggggaag cgtcttctct
     1021 tcctcgctcc tcgaccctcg cccctcgtta ctcgtcaggg gccagcggcg aagcacctga
     1081 taaccggagc cctcctccgc cggtaccgac cggaccaggg cgaaatcttt cacggaccag
     1141 gggatcgggg cggtcgtcgt gacgtcgggg cccctccggg cgttgcgcag gagggtgagg
     1201 tgcgggtgat agggacggcc ttccggaacg agatcgcagc ggggcagcgc ctggttgaga
     1261 cgcgcctgga aatcggccag ggcggggggc tcctcggagg ggccgagcca gaccacgcgg
     1321 gcccgttcga agaagccgaa ggtgtcgagc cggagctcga agggctcccc cgggagcccc
     1381 tcggccaacc ggtaaaggca atcgatccgg tcgaccggca catcgcccag gaaggccagg
     1441 gtgatgtggt agttgggcac cgccatgggc ctcccgccac agggggtgag ggcggttcgc
     1501 gccgccttcg ccaccgcgat ccgcaccggg tcgtcgggcc agagggcgaa gaagaggcgc
     1561 agcttcagca tcaggccagg aggctcagga gcccttccca ggcggtggcc accgcctgtc
     1621 ggcggacggc gtcccggtcg ccgtcgaaac ggtggctgcg caccacgggc ggctccccgc
     1681 gccgggccca ggcaaacc
//
LOCUS       DATGWW010000461         2110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_444045, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000461 DATGWW010000000
VERSION     DATGWW010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444045"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..810)
                     /locus_tag="VK150_06630"
     CDS             complement(<1..810)
                     /locus_tag="VK150_06630"
                     /inference="COORDINATES: protein motif:HMM:NF023299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3391 domain-containing protein"
                     /protein_id="HLP31019.1"
                     /translation="MAIKRVKVNELRAGMYVHDLNCGWLDHGFLRPQFLLRGEGQIQK
                     MKDQGLSEIYIDTGRGDDVADAPVLADIERDLARQLRASAEPGAALPPAKVSQREESA
                     AARRILGDAAGVVDGLLQDVRLGRQLDPAKARPLVRAMRDSVLRNPGALISLGRIKAA
                     DTYTFQHSVSICALLVSFCHALGMDAATVEEAGLGGLLHDVGKMKIPNEVLNKPGRLT
                     EEEFGIMKSHAALSRELLLEVPGISGMVIQIAGEHHEKVGGGGYPLGIAAPE"
     gene            986..>2110
                     /locus_tag="VK150_06635"
     CDS             986..>2110
                     /locus_tag="VK150_06635"
                     /inference="COORDINATES: protein motif:HMM:NF018173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31020.1"
                     /translation="MLKAYLQHVAERAAMGIPPLPLTEAQTSELTTLLAQPPAGEEKA
                     LVDLLTHRVPAGVDDAARVKAAFLASVAKGQEKVALVSREKATELLGTMLGGFNVKPL
                     IDLLDDAQVGPIAAEGLKKTLLVFDAFAEVKAKADAGNAQAKAVLKSWAEAEWFTSRP
                     EVPQSLTLTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNARPGIEPDEPGKVG
                     PLKQLEALRAKGHLIAYVGDVVGTGSSRKSATNSVLWFTGEDIPFVPNKRFGGVCLGA
                     KIAPIFYNTMEDAGALPIELDVNGMDMGDVIELRPYEGKALKNGQVIAEFKVKSDVIF
                     DEVRAGGRIPLIIGRGLTTKARAALGLPPSTVFRLPAVPKD"
BASE COUNT          343 a          780 c          669 g          318 t
ORIGIN      
        1 ctccggcgcg gcgatgccca gcgggtagcc accgccgccc accttctcgt gatgctcccc
       61 cgcgatctgg atgaccatcc cggagatgcc cggaacctcc aggagcagct cccggctcag
      121 ggccgcgtgg gacttcatga tgccgaactc ctcctccgtg aggcggcccg gcttgttgag
      181 cacctcgttg gggatcttca tcttccccac gtcgtggagc aggccgccca ggcccgcttc
      241 ctccacggtg gcggcatcca tgcccagcgc gtggcagaac gacaccagca gcgcgcagat
      301 gctcaccgag tgctggaagg tgtaggtgtc ggcggccttg atgcggccga ggctgatgag
      361 ggcgcccggg ttcctcagca ccgaatcgcg catggcccga accaggggcc tggccttggc
      421 cggatccagc tgccgaccga gccgcacatc ctggaggagc ccatccacca cgccggcggc
      481 atctccgagg atgcggcggg cggcggcgga ttcctccctc tgcgagactt tggcgggcgg
      541 cagcgcggcg ccgggctccg ccgaggccct cagttgccgc gccaagtccc gttcgatgtc
      601 ggccaacacc ggggcgtcgg ccacatcgtc gccgcggccg gtgtcgatgt agatttcgct
      661 caggccctgg tccttcatct tctggatctg cccttcgccg cgcaggagga actgcgggcg
      721 gaggaacccg tggtcgagcc aaccgcagtt gagatcgtgg acatacatcc ccgcccggag
      781 ctcattgacc ttcacccgct tgattgccat cgccccaacg cccccatgtc catgggatcg
      841 gcccggggac ccggaacatt gaggactgcc gatccctgtc caggttcagg tcgccccagg
      901 ggaatccgtc cccccgcgcc ctgcggaccc ggatgtagaa tggacgtccg gaccgcgccc
      961 agcggcgctc tcaagggggt tgaccgtgct gaaagcctat ctccaacatg tcgccgaacg
     1021 cgccgccatg gggatccccc cccttcccct caccgaagcg cagacgtctg agctcacgac
     1081 cctgctcgcc cagccccctg caggcgaaga gaaagcgctg gtggacctgc tcacccatcg
     1141 cgtgccggct ggcgtggacg acgccgcccg ggtgaaggcc gccttcctgg ccagcgtggc
     1201 caagggccag gagaaggtcg ccctggtctc gcgcgagaag gccaccgagc tgctgggcac
     1261 catgctcggc ggcttcaacg tcaagccgct catcgacctg ctcgacgacg cccaggtggg
     1321 gcccatcgcc gccgaggggc tgaagaagac cctgctggtc ttcgacgcct tcgccgaggt
     1381 gaaggccaag gccgatgcgg gcaacgccca ggccaaggcg gtgctgaagt cctgggccga
     1441 ggccgagtgg ttcaccagcc gccccgaagt gccccagagc ctcaccctga ccgtcttcaa
     1501 ggtcacgggc gagaccaaca ccgacgacct ctctccggcc cccgacgcct ggagccgccc
     1561 tgacatcccg ctccatgcgc tggccatgtt gaagaacgcc cggcccggca tcgagcccga
     1621 cgaacccggc aaggtgggcc ccctcaagca gctggaggcg ctcagggcca agggccacct
     1681 catcgcctac gtgggcgacg tggtgggcac cggctcctcc agaaagtccg ccaccaactc
     1741 ggtgttgtgg ttcacgggcg aggacatccc cttcgtgccc aacaagcgct tcggcggtgt
     1801 ctgcctgggc gccaagatcg cccccatctt ctacaacacc atggaagacg cgggcgccct
     1861 gcccatcgag ctggacgtca acggcatgga catgggcgac gtcatcgagc tgcgccccta
     1921 cgagggcaag gccctgaaga acggccaggt catcgccgag ttcaaggtga agtccgacgt
     1981 gatcttcgac gaggtccgcg ccggcggccg catccccctc atcatcggcc gcggccttac
     2041 caccaaggcc cgcgcagccc tgggcctgcc gccttccacg gtgttccgcc tcccggccgt
     2101 gcccaaggac
//
LOCUS       DATGWW010000462         1812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_34756, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000462 DATGWW010000000
VERSION     DATGWW010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34756"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..997
                     /locus_tag="VK150_06640"
     CDS             <1..997
                     /locus_tag="VK150_06640"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP31021.1"
                     /translation="FGQAFVTPRDTEAKGHRYGTRFQRVLPYLPAAASLVLVWVLLFV
                     EPRRLDWQVVLLLTPVIVLLLWRQGLVMAETRATAESLEVLVEQRTRSLAEAQSLLLQ
                     TERMNTMASIGAGMAHDLNNLIGASLLCAEKMELELAEGGAPRAKDLDRLKESTRRAG
                     ELTAQLMAFGKPQSMPVQAFDLGGHLRDRQKLFKAVVPPHLPFFVETGPEPIPVLLDP
                     SQIDQILVNLISNAVDASRAGGRIWVRTRKEGDQALLEVQDEGEGIPEPVLDRIFQPF
                     FTTKAPGRGTGLGLASVKALVDQFAGAMDVVSAVGRGTTFRIQLPLERGDAGEVA"
     gene            complement(1016..>1812)
                     /gene="mtnA"
                     /locus_tag="VK150_06645"
     CDS             complement(1016..>1812)
                     /gene="mtnA"
                     /locus_tag="VK150_06645"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF004326.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HLP31022.1"
                     /translation="ASAGEYAAACAALRAARPTAVNLMWAMDRMKDASDPVAEAQAIF
                     EEDVRLCEGMAQHGAALIQDGEGLLTHCNTGGLATAGIGTALGVIRRAFEQGKRIHVY
                     ADETRPLLQGGRLTAWELRKLGIPATLVTDSMAALLMRDGRVQRVLVGSDRVAANGDF
                     ANKVGTYGVAVQAHHHGVPFHPVAPFSTVDLTCPNGAAIPIEERDPAEVRGFGPLRWA
                     PEGMPAWNPSFDVTPVDLVTSLVLDRGVLSREQLQAGALGPLCRPS"
BASE COUNT          271 a          608 c          660 g          273 t
ORIGIN      
        1 cttcggccag gccttcgtca cgcccaggga cacagaggcc aaaggccatc gctacgggac
       61 tcgcttccag cgtgtactgc cctaccttcc cgcggcggcg tcgctggtgc tcgtttgggt
      121 cctcctgttc gtggagccac gtcggctcga ctggcaggtg gtgctcctgc tcacgcccgt
      181 gatcgtcctg cttctctggc gccagggcct ggtgatggcg gaaacccggg ccaccgccga
      241 gtcgctggag gtcctggtgg agcagcggac gaggtccctc gccgaggcgc agtccctcct
      301 cctgcagacg gagcgcatga acaccatggc cagcatcggc gccggcatgg cccacgacct
      361 caacaacctg atcggggcat cactgctctg cgcggaaaaa atggaactcg aactcgccga
      421 gggaggcgcg ccgagggcga aggatcttga ccgcctgaag gaaagcacac gccgcgccgg
      481 cgagctgacg gcgcagctga tggccttcgg taagccacag tccatgccag tccaggcctt
      541 cgacctgggc ggccatctgc gcgaccggca gaagctgttc aaggccgtgg tgccgcccca
      601 tctcccgttc ttcgtcgaga ccggcccgga gcccatcccc gtcctgctgg atccgtccca
      661 gatcgaccag atcctggtga acctgatctc caatgccgtg gatgccagcc gggccggggg
      721 gcggatctgg gtgagaaccc ggaaggaggg agatcaggct ctgctcgagg tccaggacga
      781 gggcgagggg atcccagagc cggtgctgga ccgtatcttc cagcccttct tcaccaccaa
      841 ggctccgggg cggggaacag ggctgggcct ggcctctgtc aaggcgctgg tggatcagtt
      901 cgcgggggcc atggacgtgg tgagcgccgt gggccgcggc accaccttcc ggatccagtt
      961 acccctggag cggggggacg ccggggaagt ggcgtaagca gggtcccgcg aacgatcagc
     1021 tggggcggca gaggggcccc agggccccgg cctggagctg ctcgcggctg agcaccccgc
     1081 ggtccagcac caggctggtg acgaggtcca cgggggtcac gtcgaagctg gggttccagg
     1141 cgggcatgcc ttccggggcc caccgcagcg gcccgaagcc gcgcacctcg gcggggtcgc
     1201 gctcctcgat ggggatggcg gcgccgttcg ggcaggtgag gtccacggtg gagaacgggg
     1261 ccaccggatg gaaggggacg ccgtggtggt gggcctgcac ggccacgccg taggtgccca
     1321 ccttgttggc gaaatcgccg ttggcggcca cgcggtccga acccacgagc acgcgctgga
     1381 cccggccgtc ccgcatcagg agggccgcca tgctgtcggt gaccagggtg gcgggaatgc
     1441 cgagcttcct cagttcccag gccgtgaggc ggccgccctg gagcaggggc cgggtctcgt
     1501 cggcgtagac gtggatgcgc ttgccctgct caaaggcgcg gcggatcacg cccagggccg
     1561 tgccgatgcc cgcggtggcg aggccgccgg tgttgcagtg ggtgagcagg ccctcgccat
     1621 cctggatgag tgccgcgcca tgctgggcca ttccctcgca gagccgcaca tcctcctcga
     1681 agatggcctg ggcttccgcc acgggatcgg aggcgtcttt catgcgatcc atggcccaca
     1741 tgaggttcac ggccgtgggt cgcgccgccc gcagcgccgc gcaggcggcg gcgtactcgc
     1801 ccgcggaggc gc
//
LOCUS       DATGWW010000463         1810 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_259658, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000463 DATGWW010000000
VERSION     DATGWW010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259658"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..650
                     /locus_tag="VK150_06650"
     CDS             <1..650
                     /locus_tag="VK150_06650"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HLP31023.1"
                     /translation="EQIILDGRVQVNGKTVSELGACANPRRDLITVDLIEIQREDPVY
                     ILMNKPKGYVTTVKDDQGRPTVMALLRGVPGRLYPVGRLDFNSEGLLLMTNDGALAQV
                     LMGPEHEIPKVYLVKVHRNPSPELLKEFQEGFLLSGRRLKPCHIEVAEKGDNPWLKVT
                     LTEGKNQQIRRMFAAVGHPVSKLRRVQFGPLADPLLKPGTWRYLSPQEIAAIKSL"
     gene            complement(723..1169)
                     /locus_tag="VK150_06655"
     CDS             complement(723..1169)
                     /locus_tag="VK150_06655"
                     /inference="COORDINATES: protein motif:HMM:NF022479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2721 domain-containing protein"
                     /protein_id="HLP31024.1"
                     /translation="MPAPVSDQTIYDISHVIQLSVAPVFLLTSIGTILGVLSTRLARI
                     VDRARALNERLDSDPPGDRVAAIHAEMRTLASRRRLVNLAITFGTTSALLVCVSIATV
                     FLGAVMKASVAGAVASLFILAMAAFVAALVFFLREVLLAVRSLHLA"
     gene            complement(1231..>1810)
                     /gene="ribA"
                     /locus_tag="VK150_06660"
     CDS             complement(1231..>1810)
                     /gene="ribA"
                     /locus_tag="VK150_06660"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: protein motif:HMM:NF001591.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HLP31025.1"
                     /translation="EAPLPTERGTFRAVVFRDEATGAEHVAMVMGDVAGEAVPTRIHS
                     ECLTSEVLGSLKCDCRAQLDRALDLIAERGRGVLLYLRQEGRGIGLLNKLKAYALQEQ
                     GLDTVEANHSLGFPDDLRTYDCAVEMLKFFGITQVKLLTNNPRKIGALESAGIEVERE
                     RHQLASNPHNLRYLKTKARKSGHMLDFEEEAL"
BASE COUNT          311 a          619 c          615 g          265 t
ORIGIN      
        1 gcgagcagat catcctcgat ggccgtgtgc aggtgaacgg caagaccgtc tcggagctgg
       61 gcgcctgcgc caacccgcgc cgggatctga tcaccgtgga cctcatcgag atccagcggg
      121 aggatcccgt ctacatcctc atgaacaagc ccaagggcta cgtcaccacc gtgaaggatg
      181 accagggccg cccgacggtg atggccctgc tacggggcgt cccaggccgc ctctaccccg
      241 tgggccggct cgacttcaac tccgagggct tgctgctcat gaccaacgac ggcgccctcg
      301 cccaggtgct catggggccc gagcatgaga tccccaaggt ctacctcgtg aaggtgcacc
      361 ggaatcccag ccctgaactg ctcaaggaat tccaggaagg ctttctcctc agcgggcggc
      421 gcctcaagcc ctgccacatc gaggtcgccg agaagggcga caacccctgg ctgaaggtga
      481 ccctcaccga gggcaagaac cagcagatcc gccgcatgtt cgccgccgtg ggccatcccg
      541 tgagcaagct gcgccgggtg cagttcgggc cgctggccga ccccctgctg aagcccggca
      601 cctggcgcta cctcagcccc caggagatcg cggcgatcaa gagcctctaa cgccgccagc
      661 cggcgggccc gaccccgccc cggtcgcggg ggcggtaccc aggcggtcgc cgcgaaaggc
      721 cgtcaggcca gatggaggct ccggaccgcc agcaggactt cgcgaaggaa gaacaccagc
      781 gcggccacga aggcggccat ggccaggatg aacagcgagg ccaccgcacc ggccacgctg
      841 gctttcatga cggcgccgag gaacacggtg gcgatgctca cgcacaccag cagcgcggaa
      901 gtggtgccga aggtgatggc caggttcacc aggcgccgcc ggctggccag ggtgcgcatc
      961 tctgcgtgga tggccgccac gcggtcgccc ggcggatcgg aatcgagccg ctcgttcagc
     1021 gcccgggccc ggtccacgat gcgcgccagc cgcgtggaga gcacacccag gatggtaccg
     1081 atggacgtga gcaggaagac cggcgccacg gagagctgga tgacgtggga gatgtcgtag
     1141 atggtctggt cggagacggg cgcgggcatg cctatagcta tcgggcatcc gcgatcagct
     1201 gtcaccaaaa aaagcggggc cggccttgca ctacagcgct tcttcctcga aatccagcat
     1261 gtggccgctc ttgcgggcct tggtcttcag gtagcgcagg ttgtgggggt tcgaggccag
     1321 ctggtggcgc tcccgctcga cttcgatgcc ggcggattcc agcgcgccga tcttgcgcgg
     1381 gttgttggtg agcagcttca cctgggtgat gccgaagaac ttcagcatct ccacggcgca
     1441 gtcgtaggtg cgcaggtcgt cggggaagcc cagggaatga ttggcttcca ccgtgtcgag
     1501 cccctgctcc tgcagcgcgt atgccttgag cttgttcagc aggccgatgc cgcggccctc
     1561 ctggcggagg tagagcagca cgccgcggcc acgctccgcg atgaggtcga gcgcccggtc
     1621 gagctgcgcg cggcagtcgc acttcagcga cccgagcacc tcgctcgtca ggcactcgga
     1681 gtggatgcgc gtcggcaccg cctcgccggc gacgtcgccc atcaccatcg cgacgtgctc
     1741 cgcgcccgtc gcctcgtcgc ggaagaccac cgcgcggaag gtgccgcgct ccgtcggcag
     1801 cggggcctcg
//
LOCUS       DATGWW010000464         1733 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_153109, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000464 DATGWW010000000
VERSION     DATGWW010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153109"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VK150_06665"
     CDS             <1..193
                     /locus_tag="VK150_06665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31026.1"
                     /translation="QRLGYRWDVALPAPDPSTYAAQAAALEAAHPAVLFPAEMPATAL
                     GRPVVPDDSLVFGKHWDRP"
     gene            190..1317
                     /gene="lpxB"
                     /locus_tag="VK150_06670"
     CDS             190..1317
                     /gene="lpxB"
                     /locus_tag="VK150_06670"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: protein motif:HMM:TIGR00215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HLP31027.1"
                     /translation="MTKTLLVVAGEDSGDLHGAELLRELKARQPGLRVMGVGGPRMTP
                     LLDRKLADVKDLAVVGFFEVIKHLPRLNRLFKQILGAAREERISGALLIDYPGFNLRL
                     AKALRAQLPAVTLHQYVCPQVWAWKKGRIPDLGRTLDTLYCLFDFEPELFRGYPVDAR
                     FVGHPLVEVVKAECDRAAFFRETGLDASRPLVALLPGSRKGEIQRLLPPMAELAMRWR
                     RERPEVQWVLPVAPTLEPAFVRAHLGDAPVTLVQDRAYAARAHADAALVASGTATLET
                     ALLGTPFAIVYKLNALTYQVARRIVKVPYFGLANVVARREVAPELLQDEVNPERLGRE
                     LTRLLDPAAAARVRAELGAVRGHLGEPGAAGRVAEDLLGKL"
     gene            1496..>1733
                     /locus_tag="VK150_06675"
     CDS             1496..>1733
                     /locus_tag="VK150_06675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31028.1"
                     /translation="MTIRRQIPTLALAALCMLLPSRAQAPAVVPQPATIDGASAHVYK
                     TIRGTELRLHVFSAEPAAPAARRPAIVFFFGGGWS"
BASE COUNT          214 a          647 c          609 g          263 t
ORIGIN      
        1 ccagcgcctc ggctaccgct gggatgtggc cctgcccgcg ccggatccgt ccacctacgc
       61 cgcgcaggcc gcggccctgg aggcggcgca tccagcggtg ctgttccccg ccgagatgcc
      121 cgccacggcc ctggggcggc ccgtggtgcc ggatgacagc ctggtgttcg gcaagcactg
      181 ggatcgccca tgacgaagac cctgcttgtc gtcgccgggg aggattccgg cgacctccat
      241 ggcgcggagc tgttgcggga gctgaaggcc cggcagcccg gcctgcgcgt gatgggtgtg
      301 ggcggacccc gcatgacgcc cctcctcgac cgcaagctgg cggacgtgaa ggatctcgcc
      361 gtggtgggct tcttcgaggt gatcaagcac ctgccccggc tgaaccgcct cttcaagcag
      421 atcctcggcg ccgcccggga ggagcggatc tccggcgcgc tgctcatcga ctatcccggc
      481 ttcaacctgc gcctggccaa ggccctgcgc gcccagcttc ccgccgtgac gctgcaccag
      541 tacgtctgcc cccaggtctg ggcctggaag aagggccgca ttcccgacct gggccggacg
      601 ctggacaccc tctactgcct gttcgacttc gaacccgagt tgttccgcgg ctacccggtg
      661 gacgcccgct tcgtgggcca ccccctggtg gaggtggtga aggcggagtg cgaccgcgcc
      721 gcgttcttcc gcgagacggg cctggatgcc tcccggccgc tggtggcgct cctgccgggc
      781 agccggaaag gcgaaatcca gcggctgctg ccgcccatgg cggagctggc catgcgctgg
      841 cgacgcgagc ggcccgaggt gcagtgggtg ctgcccgtgg cccccacgct ggagccggcc
      901 ttcgtgcggg cccacctcgg ggacgccccc gtgaccctgg tgcaggatcg cgcgtacgcc
      961 gcccgggccc acgcggacgc tgcgctcgtg gcctccggca cggccacgct ggaaaccgcc
     1021 ctgctcggca cgcccttcgc catcgtctac aagctcaatg ccctcaccta ccaggtggcg
     1081 cgccgcatcg tgaaggtgcc ctattttggc ttggccaacg tggtggcccg gcgcgaggtc
     1141 gcgcccgaac tcctgcagga cgaggtcaac cccgagcgcc tgggccgaga gctgacgcgg
     1201 ctgctggatc ccgcggccgc cgcccgcgtc cgcgcggagc tgggggcggt gcgtggccac
     1261 ctgggcgaac cgggcgcggc gggccgggtg gcggaggatc tgctgggcaa gctctgaagc
     1321 ttccttcggg cggcggggcg ccgttccatc ggctggcgtc gccatgcctc gactcacccc
     1381 atgcaaggcg gggatccggc cccggatgca ggcgggccat cgctcgccgg ggggatccta
     1441 catgcctgtc catcccgatc cgaaacgact ccgccgctcg cccgaggagg ctcccgtgac
     1501 catccgccgc caaatcccga cgctcgcgct ggccgcgctc tgcatgctgc tgccgtcccg
     1561 ggcgcaggcg cccgccgtcg tgccccagcc tgcgacgatc gatggcgcct cggcgcacgt
     1621 ttacaaaacc atccggggca cggagctgcg tctccatgtc ttcagcgcgg agccggccgc
     1681 gccggccgcc cgcaggccgg ccatcgtgtt cttcttcggt gggggctggt cgg
//
LOCUS       DATGWW010000465         4665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_444297, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000465 DATGWW010000000
VERSION     DATGWW010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4665
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444297"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..214
                     /locus_tag="VK150_06680"
     CDS             <1..214
                     /locus_tag="VK150_06680"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HLP31029.1"
                     /translation="PLLIHTTTNDRDVNVVEVEMLINALKAAGKTFEHKIYQDAPGGH
                     SFNRIDTTLAHESRNEIYQFLEKHLK"
     gene            complement(487..3336)
                     /gene="secD"
                     /locus_tag="VK150_06685"
     CDS             complement(487..3336)
                     /gene="secD"
                     /locus_tag="VK150_06685"
                     /inference="COORDINATES: protein motif:HMM:TIGR01129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HLP31030.1"
                     /translation="MTKRSLWRLVIVLAVLFGCGYFFTPLSKVKLGLDLRGGVHFELE
                     VQGQEALAADLRDSKDRMAARLKEKGLPGATVRVEGDALRVDGVGADQKATVEKVAKD
                     FFSGYALSAEGDVFLLRHKAEYQKQLKDDANKRALEVIEKRIRDIDPANVLEPEITAS
                     GAEGNRIVVEIPGIEEGDRERIKKLLATPGRLEQRLLAKAPQIYFSSKEEALAFYKGQ
                     IPPEFELLPEIESERQARRAGQPALKAKPGEEKISRWVLLESRVAVDGADIIDSHRAS
                     NSQTEANEVNFTLNKKGDDDFARLTGTASEENRLIAIVLDHKIVTELSAKEKIIGGAV
                     RISGSFSAQEADDLASQLRSGALRAPMKFLEEGVVGPGLGRDSIHAGVRAAVLGFAVI
                     IGFMVIFYHWSGANAIIALTVNVIVMMGLLGSFRATLTLPGIAGFVLTLGMAVDANIL
                     IFERIKEELALGKSVPGAIDAGFDRVFWTIVDSHVTQLFAALLLFIFGTGPVKGFAVT
                     LTVGVVASLFTSIYISRYIYDWVLEHHPGTKTLSVGTHTFFKGSSYDFMKYKGTALAI
                     TWGLIALCLLYVRPWNLTHNNRIQLGMQFVGGNDMTVRFRGAMEPETIRAALARNGYT
                     EATVVPFENADKSVRDFSVKVKAKKDGDQKDATIQANALRGIFKQLDPEAASGSPLPA
                     LNLEGSKTLADSLVKINPLQVANDEVVLNATYLPLAEKVISARDRLPSGLFQAFGELP
                     KDLPQAVTETIQKNYRLGAVGIRKNESFSPSISGEWTSKTLTAVGLAMLAILIYVIFR
                     FTASFAVGGIVALVHDMLMALGLFAAFGYEFNVPVVASFLTLMGYSMADTIVVFDRIR
                     ENSHRPEYRRATVTKLVNDSINQTLGRTILTSLSVLFVSVCLWLFGGPALKDLAFPLV
                     IGVITGTYSSIYIASPVVVYWDQWFGGKDKLKQHA"
     gene            complement(3407..3721)
                     /gene="yajC"
                     /locus_tag="VK150_06690"
     CDS             complement(3407..3721)
                     /gene="yajC"
                     /locus_tag="VK150_06690"
                     /inference="COORDINATES: protein motif:HMM:TIGR00739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HLP31031.1"
                     /translation="MTFALFQQTPAAGPPGWTQFVFIGGMALMFYFLLIRPQSKARKE
                     TEARLAKLKAGDEVVLTSGLYATIDRVEDQHIWVKLGGSVVKARRAAVAALASEPETK
                     QN"
     gene            complement(3722..>4665)
                     /gene="tgt"
                     /locus_tag="VK150_06695"
     CDS             complement(3722..>4665)
                     /gene="tgt"
                     /locus_tag="VK150_06695"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: protein motif:HMM:NF013835.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HLP31032.1"
                     /translation="HLGLRPGDALVARLGGLHRFMGWEGPILTDSGGFQVFSLASLRK
                     MTEEGVTFQSHLDGSPQFLSPERSMEIQRNLGSDICMALDECPPGRLERGKLEVSMAR
                     TTRWLARSRAVPLQPHQGLFAINQGGTHLDLRRRHLAEAMDLDAKTPFQGFAVGGLSV
                     GEPKEDMNAVLAEFVRELPADRPRYLMGVGTPEDLIFGIEHGVDLFDCVLPSREARHG
                     RILTSRGKLNLKNARHREVDLPLDPACGCYTCRTFSRAYLHHLFRCGELLGFTLNTIH
                     NLSYTVGLTRAARQALLENRFPAFAQSTRAGWQTEEP"
BASE COUNT          779 a         1470 c         1641 g          775 t
ORIGIN      
        1 ccccctgctc atccacacca ccaccaacga ccgcgacgtg aacgtcgtcg aggtcgagat
       61 gctcatcaac gccctgaaag ccgccggaaa aaccttcgag cacaagatct accaagacgc
      121 ccccggcggc cacagcttca accgcatcga caccacgctg gcccacgaat cccgcaacga
      181 gatctaccag ttcctggaga agcacctgaa gtagcgagcc ccatcaaagg cggaccagaa
      241 ccagcccggc tctgccgggc tgattcgcgg gggcccgggg gtgttcgcgc agcgaagcgg
      301 agcgtggaac ccccggacaa cctacgaacc ggcccggctc tgccgggctg attcgcgggg
      361 gcccgggggt gttcgcggag cgaagcggag cgtggaaccc ccggacagta caagcagaag
      421 cccggctcag ccgggcttct gcgcgggggc ttgggggtgc gcgcagcgcg gaacccccaa
      481 acaacatcaa gcatgctgct tgagcttgtc cttgccgccg aaccactggt cccagtacac
      541 caccacgggg ctcgcgatgt agatggacga gtaggtgccg gtgatcacgc cgatgaccag
      601 cgggaaggcc aggtccttga gggccgggcc gccgaatagc cagaggcaga cgctgacgaa
      661 gagcaccgaa agcgaggtga ggatggtgcg gcctagcgtc tggttgatgg aatcattcac
      721 cagcttggtc accgtggcgc ggcggtactc cgggcggtgg ctgttctcgc ggatgcggtc
      781 gaagaccacg atggtgtcgg ccatggagta gcccatgagc gtcaggaagc tcgccaccac
      841 cggcacgttg aactcatagc cgaaggccgc gaagagcccc agggccatga gcatgtcgtg
      901 gaccagcgcc acgatgccgc ccacggcgaa gctcgccgtg aaccggaaga tcacgtagat
      961 caggatggcc agcatggcga gcccgacggc ggtgagggtc ttgctcgtcc attcgccgga
     1021 gatgcttggc gagaagctct cgttcttccg gatgccgacg gcgcccaggc ggtagttctt
     1081 ctggatcgtc tcggtcacgg cctggggaag gtccttgggc agctccccga aggcctggaa
     1141 gaggcccgaa ggaaggcggt cgcgggcgga aatgaccttc tccgcgaggg gcaggtaggt
     1201 cgcgttgagg acaacttcgt cgttggcaac ctggagcggg ttgatcttca ccaggctgtc
     1261 ggccagcgtc ttcgaccctt cgaggttgag ggcgggcagc ggactgcccg aggccgcctc
     1321 aggatcaagc tgcttgaaga tgccgcggag ggcgttggct tggatggtgg cgtccttctg
     1381 gtcgccgtcc ttcttggcct tcactttcac ggagaagtca cggacggact tgtcggcgtt
     1441 ctcgaagggc accacggtgg cctcggtgta gccattcctg gccagggccg cccggatggt
     1501 ctcgggttcc atggcaccgc ggaagcggac ggtcatgtcg ttgccaccca cgaactgcat
     1561 gccgagctgg atgcggttgt tgtgggtcag gttccagggg cggacataga ggaggcagag
     1621 cgcgatcagg ccccaggtga tggccagggc ggtgcccttg tacttcatga aatcgtagga
     1681 cgaccccttg aagaaggtgt gggtgcccac ggagagggtc ttggttccgg ggtgatgctc
     1741 cagcacccag tcgtagatgt agcggctgat gtagatgctg gtgaacagcg aggccacgac
     1801 gccgacggtg agggtcacgg cgaagccctt caccgggccc gtgccgaaaa tgaacagaag
     1861 cagcgctgcg aagagctggg tcacgtggct gtccacgatg gtccagaaca cccggtcgaa
     1921 gccggcatcg atggcgcctg gcacgctctt gccgagcgcc agttcctctt tgatgcgctc
     1981 gaagatgagg atgttggcgt ccaccgccat gcccagggtg agcacgaagc cggcgatgcc
     2041 gggaagggtc aacgtggctc ggaaggagcc cagcaggccc atcatcacga tgacgttcac
     2101 cgtgagggcg atgatcgcgt tggcgccgga ccagtgatag aagatcacca tgaagccgat
     2161 gatgacggcg aatcccagca cggcggcgcg gacgccggcg tggatggagt cgcgtccgag
     2221 gccgggcccc acgaccccct cttcaaggaa cttcatgggc gcgcgcaggg cgccgctgcg
     2281 gagctggctg gccagatcgt cggcttcctg ggcggagaag cttccggaga tccgcacggc
     2341 gccgccgatg atcttctcct tcgcgctcag ctcggtgacg atcttgtggt ccagcacgat
     2401 ggcgatgagc cggttctcct cggaggccgt cccggtcagg cgggcgaagt cgtcatcacc
     2461 cttcttgttc agggtgaaat tgacctcgtt ggcctcggtc tgcgaattgg acgcgcggtg
     2521 cgaatcgatg atgtcggcgc cgtccaccgc cacgcggctc tcaagcagga cccaccggct
     2581 gatcttctcc tcgccgggct tggccttcag cgcgggctgg ccggcccggc gcgcctggcg
     2641 ctcgctctcg atttcgggaa gcagctcgaa ttccggggga atctggccct tgtagaaggc
     2701 caaggcctct tccttcgagc tgaagtagat ctgcggcgcc ttggccagca accgctgctc
     2761 caggcggccc ggggtggcca gcagcttctt gatgcgctct cggtcgccct cctcgatgcc
     2821 ggggatctcc accacgatgc ggttgccttc ggcgccgctg gcggtgatct cgggctcaag
     2881 cacgttggcg ggatcgatgt cgcggatgcg cttctcgatg acttccaggg cgcgcttgtt
     2941 cgcatcgtcc ttgagctgct tctggtactc ggccttgtgc ctgagcagga agacgtcgcc
     3001 ctcggcgctc agcgcgtagc cggagaagaa atccttggcg accttctcga ccgtggcctt
     3061 ctggtcggct ccgacgccat ccacccggag ggcgtcgccc tccacgcgca cagtggcgcc
     3121 gggcaggccc ttctccttga ggcgggcggc catgcggtcc ttgctgtcgc gcaggtcggc
     3181 agccagggct tcctggccct ggacctccag ctcgaagtgg acgccgcccc ggagatcgag
     3241 gccgagcttc accttggaga ggggcgtgaa gaagtatccg cagccgaaca gcacggccag
     3301 gacgatgacg aggcgccaga ggctccgttt ggtcacgggg cgctccttac aggaagcggg
     3361 tcggtccagg ttcggaggcc cggaccggcc cgggaggtcg aggagatcag ttctgcttgg
     3421 tttcgggctc ggaggccagg gcggccacgg ccgcgcgccg ggccttgacc acggatccgc
     3481 cgagcttcac ccagatgtgc tggtcctcga cgcggtcgat ggtggcgtat aggccggagg
     3541 tgagcacgac ctcgtcgccg gccttcagct tcgcgaggcg ggcttcggtt tccttgcggg
     3601 ccttgctctg ggggcggatg agcaggaagt agaacatcag ggccatgccg ccgatgaaca
     3661 cgaactgcgt ccagccggga gggccggccg cgggggtctg ctggaacagg gcgaaggtca
     3721 ttcagggctc ctcggtctgc catccggcgc gcgtggactg ggcgaaggcc ggaaaccggt
     3781 tctccagcag agcctgccgc gcggcgcggg tgagtcccac agtgtagctc aggttgtgga
     3841 tcgtgttcag cgtgaagccc agcagctccc cgcagcggaa caggtggtgc aggtacgccc
     3901 gggagaaggt ccgacaggtg tagcagccgc aggcgggatc gagggggagg tccacctccc
     3961 ggtgccgggc gttcttcagg ttgagcttcc cccggctggt gaggatgcgg ccgtggcggg
     4021 cctcccggct gggcagcacg cagtcgaaga gatcgacccc gtgctcgatg ccgaagatca
     4081 ggtcttccgg cgtgcccacg cccatgaggt agcggggacg gtccgccggc agctcccgca
     4141 cgaactcggc cagcacggcg ttcatgtcct ccttcggctc ccccacgctg agcccgccca
     4201 ccgcgaagcc ctggaagggc gtcttcgcat cgaggtccat ggcctccgcc aggtggcggc
     4261 gccgcagatc caggtgggtg ccgccctggt tgatggcgaa gagcccctgg tggggctgga
     4321 ggggcacggc gcggctgcgg gccagccagc gggtggtgcg ggccatgctc acctcgagct
     4381 tgccgcgctc caggcgcccg ggcgggcact cgtcgagggc catgcagatg tccgagccca
     4441 ggttccgctg gatctccatg ctgcgttcgg gtgacaggaa ctgcgggctg ccgtccaggt
     4501 ggctctggaa ggtgaccccc tcctcggtca tcttccgcag ggaggccagg gagaacacct
     4561 ggaaaccccc tgaatccgtg aggatggggc cttcccagcc catgaaccgg tgcaggccgc
     4621 ccagccgcgc caccagggcg tcgccggggc gcaggcccag gtggt
//
LOCUS       DATGWW010000466         3488 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_380307, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000466 DATGWW010000000
VERSION     DATGWW010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3488
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380307"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1219
                     /locus_tag="VK150_06700"
     CDS             <1..1219
                     /locus_tag="VK150_06700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31033.1"
                     /translation="EWPRDIVLRPEPAFRREAVFIVRLDFTDEPSRLPDGALRELLFS
                     RRPGVASAANYLYEVSKGALSLVEGRFLKLRSAEHPAPRHDDHKEAMARWVLERLQGE
                     TWRDCDRVDNRTGAARPDGKPDHLWIITPGAPQSLTADESHLKAVSLLMPLPWRKAQR
                     WPLLFMTEEVPLGNIVHEAFHAMGEHRVDDLYLGCDDPLTAGIWDLMDAGQYRGWDRS
                     HPEEGPWVEDTGYSPSHPTAWVRSELWYRGYFRGGVPRLAVKGRTWEGWIAPASRAPG
                     TDPQWVTLLDPRKKGRFFSLEVRQPWGFERGRVGGRFGPGHAGLVVARVDPSLLSYGE
                     PRGPVRVVDAHPGSPEPPKPRFPCGRWELDDAAFNLGPGENPKGRSGPLSWEVLETDA
                     SGRMRVRVALARR"
     gene            complement(1266..1970)
                     /locus_tag="VK150_06705"
     CDS             complement(1266..1970)
                     /locus_tag="VK150_06705"
                     /inference="COORDINATES: protein motif:HMM:NF015216.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylmercury lyase family protein"
                     /protein_id="HLP31034.1"
                     /translation="MTSQLPPRPLNLSTLHQAIMEHLVERGAAPTLATLAGRFGTGEE
                     AVGRKLLDLQAEHGVVLHPGTTDIWVAHPFSTAPTLFSIESERGHRWSNCAWCSMGAA
                     ALLGGEVRITTTLGGESRQVTVEISGGELQRDDLFVHFPVPMRKVWDNVIYTCSVMLV
                     FDSVPAIDAWCERHGIPRGDVQPLRNVWEFAKVWYGNHLKADWTKWTAEEAGALFRQF
                     GLEGETWELPGGNTRF"
     gene            2248..2715
                     /locus_tag="VK150_06710"
     CDS             2248..2715
                     /locus_tag="VK150_06710"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HLP31035.1"
                     /translation="MRPTLLLCAALTLSAQAPATTPPAAVLDDWHLAAAQADEGRYFS
                     HLAEDAVFLGTDATERWVKPAFQTWAHPIFQRGKAWNFRATRRALTLSRDGRTAWFDE
                     DLDTPNLGPARGSGVLTLEKDRWLIRQYNLSLPIPNALVKGVKAQIAALANKS"
     gene            2747..>3488
                     /locus_tag="VK150_06715"
     CDS             2747..>3488
                     /locus_tag="VK150_06715"
                     /inference="COORDINATES: protein motif:HMM:NF014301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PA domain-containing protein"
                     /protein_id="HLP31036.1"
                     /translation="MNPRHLLACLAACLVPCLATANLAAQTSLPPASAAERLQKEAFR
                     THGAYDDLAWLCDRIGPRLSGSPQLDQAIAWAQARLKAAGLENVHAEPVMVPHWVRGR
                     EAAELLLPTPHRLNILGLGGSVGTPEGGLTADVVVVGSFDELDRLGAAAKGKIVVYDV
                     PFKGYGHTVVYRHDGAARAAKAGAVAALVRSVGPVSLDTPHTGLMDYDPAAPKIPTAA
                     ITIEAATQMRRMQDRGERIRMRLEMGAKT"
BASE COUNT          533 a         1320 c         1152 g          483 t
ORIGIN      
        1 ggaatggccc cgggacatcg tcctgcggcc tgagcccgcc ttccgccggg aggcggtctt
       61 catcgtccgc ctcgatttca ccgacgagcc ctccaggctg cccgacggcg ccctccgcga
      121 gttgctcttc tcccgccggc ccggggtggc cagcgccgcc aactacctct acgaagtgag
      181 caagggcgcc ctctccctgg tggagggccg gttcctgaag ctgcgcagcg ccgagcatcc
      241 cgcgccgcgc cacgacgacc acaaggaggc catggcccgc tgggtgctgg agcgcctgca
      301 gggcgaaacc tggcgcgact gcgaccgcgt ggacaaccgc accggcgccg ccagacccga
      361 tggcaagccc gaccacctgt ggatcatcac cccgggcgcg ccccagtcgc tcaccgccga
      421 cgaatcgcac ctcaaggccg tgagcctgct catgcccctg ccctggcgca aggcccagcg
      481 ctggcccctg ctcttcatga ccgaggaagt gcccctgggc aacatcgtgc acgaggcctt
      541 ccacgccatg ggcgagcatc gggtcgacga cctctacctc ggctgcgacg accccctcac
      601 cgcaggcatc tgggatctca tggacgcggg ccagtaccgc ggctgggacc gctcccaccc
      661 cgaggagggc ccctgggtgg aggacacggg ctacagcccc tcgcacccca ccgcctgggt
      721 gcgttccgag ctctggtacc gcgggtattt ccgtggcggc gtgccccgcc tggccgtgaa
      781 gggccgcacc tgggaaggct ggatcgcgcc cgcgtccagg gcccctggca ccgatcccca
      841 gtgggtcacc ctgctcgatc cgagaaagaa gggtcgcttc ttcagcctgg aagtgcgcca
      901 gccctggggc ttcgagcggg gccgcgtggg cgggcgcttc gggcccgggc atgcgggcct
      961 ggtggtcgcg cgcgtggatc ccagtctgct cagctacggc gagccgaggg gccccgtgcg
     1021 ggtggtggac gcccatcccg gcagcccgga gccgccgaag ccgcgcttcc cctgcggccg
     1081 ctgggagctg gacgacgccg ccttcaacct gggtcccggc gaaaacccca agggccgcag
     1141 cggccccctg tcctgggaag tgctcgagac cgacgccagc ggccggatgc gggtgcgggt
     1201 ggccctggct cgccggtgac ccgtcgcccc gtcgggcggc gaaggcggga ttgcgccacg
     1261 cgcccctaga accgggtgtt gccgccgggc agctcccagg tctcaccttc caggccgaat
     1321 tgccggaaca gggcccccgc ctcttcggca gtccacttgg tccaatccgc cttcaggtgg
     1381 ttcccgtacc agaccttggc gaattcccag acgttgcgaa gcggctggac gtcgcccctg
     1441 gggatgccgt ggcgctcgca ccaggcgtcg atcgccggca ccgagtcgaa caccagcatc
     1501 acgctgcagg tgtagatcac gttgtcccac accttccgca tgggaactgg gaagtggacg
     1561 aacaggtcgt cccgttgcag ttcacccccg gagatctcca ccgtcacctg ccgggattca
     1621 cccccgaggg tggtggtgat gcggacctcg ccacccagaa gggccgccgc gcccatggaa
     1681 caccacgcgc agttcgacca ccggtggccg cgctcactct cgatcgagaa cagggtcggg
     1741 gcggtggaga acgggtgcgc cacccagatg tccgtggtgc cggggtgcag caccacccca
     1801 tgctcggcct ggaggtcgag cagcttccgc cccaccgcct cctcgccggt gccaaaccgc
     1861 ccggccaggg tggcgagggt gggggcggcc ccccgctcca caagatgttc catgatcgcc
     1921 tgatgcaggg tcgaaaggtt cagtgggcga ggcggaagct ggctggtcat gggcgggtcc
     1981 tccaggcgtg gttccgggat cgcagagcac ccagaccctg cgattcgagc agccttggat
     2041 gggcaaggga accctcctgg gtcaaagggt ccattcctgg tgcgaacacc agcgaactga
     2101 accttagacg ctcggcaccc accgcgcggc ggggcgccgg ccgtcgaagg tggacctcca
     2161 gtcctcgccc cgcacccaga gcctccagac ccggagcgcc gccagggggt cctccggcgc
     2221 taggattcag gacatcccgg agcccgcatg cgccccaccc tcctcctttg cgccgccctc
     2281 accctctccg cccaggctcc ggcgacgacg ccccccgccg cggtcctgga cgactggcac
     2341 ctggccgcgg cccaggccga cgaaggccgc tacttctcgc acctggcgga agacgccgtg
     2401 ttcctgggaa ccgatgccac cgaacgctgg gtcaagcccg ccttccagac ttgggcccac
     2461 cccatcttcc agcgcgggaa ggcctggaac ttccgcgcca cccggcgggc actgaccctg
     2521 tcccgggatg gccggaccgc ctggttcgac gaggatctcg acaccccgaa cctgggtccg
     2581 gccaggggca gcggcgtgct caccctggag aaggaccgct ggctcatccg ccagtacaac
     2641 ctcagcctgc cgatccccaa tgcgctagtg aagggtgtga aggcccagat cgcggccctg
     2701 gccaacaaat cctgacgcag ggaatcgaca cccagtaaga tgaggtatga atccccgaca
     2761 cctcctcgcc tgcctcgccg cctgtctcgt gccctgcctc gccaccgcga atctcgcggc
     2821 ccagacatcc ctcccgccgg ccagcgccgc cgaacgcctg cagaaggaag ccttccgcac
     2881 acacggcgcc tatgacgacc tggcctggct ctgcgaccgc atcggacccc gcctttccgg
     2941 gtcgccccag ctcgaccagg ccatcgcctg ggcccaggcg cgcctgaagg ccgcgggcct
     3001 cgagaacgtc cacgccgagc ccgtgatggt gccccactgg gtgcggggcc gcgaggcggc
     3061 ggagctgctg ctgcccacgc cccaccggct gaacatcctg ggcctcggcg gcagcgtggg
     3121 cacgcccgag ggcgggctca ccgccgacgt ggtggtggtg ggctccttcg acgagctcga
     3181 ccgcctgggc gcggcagcga agggcaagat cgtggtctac gacgtgccct tcaagggcta
     3241 cggccacacg gtggtctacc gccatgacgg cgccgcgcgg gccgcgaagg ccggcgccgt
     3301 ggccgccctg gtgcgctccg tgggccccgt gagcctcgac acgccgcaca ccgggctcat
     3361 ggactacgac cctgccgcgc cgaagatccc cacggcggcc atcaccatcg aagccgccac
     3421 gcagatgcgt cgcatgcagg accgcggcga acgcatccgc atgcgcttgg agatgggcgc
     3481 gaagaccc
//
LOCUS       DATGWW010000467         5863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_82056, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000467 DATGWW010000000
VERSION     DATGWW010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5863
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82056"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1812)
                     /gene="ligA"
                     /locus_tag="VK150_06720"
     CDS             complement(<1..1812)
                     /gene="ligA"
                     /locus_tag="VK150_06720"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HLP31037.1"
                     /translation="MTDLRQRMKDLADQVRSHRHRYYVLDQPVVSDAEYDALERELRD
                     LEVAHPDLADPNSPTLRVGAPPVDAFEKRRHAVPMLSLDNAYSESELLEWEARWRKLA
                     PEAEARYAAELKVDGLSLSLRYENGLLVEALTRGDGETGELVTENARTISDIPKVLRG
                     NAIPTHLTVRGEVFLSRKRWEELNLQRDARGEPRFANPRNAASGTMKLLDSKEVQNRV
                     LSFLPWQAIWEDVWPAPPQSDQAAAMAQIEEWGFSRMPAREFGTMKEMLRFIEIQAEA
                     RLKLPFDTDGVVLKVLDFEVQKRLGATDRIPRWAIAFKYPATQVTTTVLGITWQVGRS
                     GKLTPVAELEAVEVAGSTVRRATLHNVDELARLGLRIGHRVFIEKGGEVIPKVVALVP
                     GEETRDLPAPVVPETCPVCAGEVGKADDAEVAIRCLNPECPAKLVARLLHFGGRSALD
                     IEGMGEALVEQLVASGRFEQPWEVFTLLADPRPGLAYLSGLDRMAEKSAQNLLDAMEA
                     ARVKPLSRWIHALGIPMVGARTAELLAEAYPSLESLWAADEQRLQVVEEVGPKVAAAL
                     RAFAALHPDLPARLSALEVRPAAPAPRDLSGLPLSGEV"
     gene            complement(1809..2894)
                     /gene="rodA"
                     /locus_tag="VK150_06725"
     CDS             complement(1809..2894)
                     /gene="rodA"
                     /locus_tag="VK150_06725"
                     /inference="COORDINATES: protein motif:HMM:TIGR02210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HLP31038.1"
                     /translation="MRERIRALDPRLLWVIVALIALGTLTLYSAGRNTPQAGIWLKQS
                     VWNLLGMALMLILATMDPRRVFRYSFPAYLLGLVALAAVLVVGKKIGGSTRWFVVAGQ
                     TFQPSELMKWITLLYVSHRLGSRPADAVGRLELFGALGLVVFPMLLIQRQPDLGMALS
                     FLPILLIIPLMKGLRARWVVALLLLVVVGGVGAWKVALKPYQKQRVMIFLDPSSDLQG
                     KGYQVNQSRIAIGSGGLIGKGFTSGSQTQLNFLPVKTTDFAFSVWAEERGFLGVLLAL
                     GLFGLLLSRILDAARAAHTNAEAYFCAGAAGIFALHLLVNVGMVAGALPNKGMVLPFF
                     SAGGSSTLSFFLALGLIMGILHRSRVK"
     gene            complement(2891..4783)
                     /gene="mrdA"
                     /locus_tag="VK150_06730"
     CDS             complement(2891..4783)
                     /gene="mrdA"
                     /locus_tag="VK150_06730"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR03423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HLP31039.1"
                     /translation="MDPRQRPILHRRLGVFKVLAWSLVALLVLVYAWLQLVRQGEFKQ
                     LAMQQAVKIRPLPAPRGLVLDRNGHRLVDNRRALHLVVQREDLPAKAEVVASLAEALN
                     LDPAALARKVQIYRLAGKGRPLVLKENLDEAGIALAERVRARFPFLSVEVAPRRVYLG
                     DELAGHLLGYVGEVDEELMKAKPGIFRLGETIGKEGFEASGNDKLKGVDGQKRILVDQ
                     LGTEVANFGQVDAVAGRSLYLTLDAGLQKVAQDAFGEEAGAAVVLDLRDGGVLAMYSS
                     PSYDPNLFLNRLSQDMVDRYLANNVTKPMVNRAIQGIYAPGSTFKLLVALAALEKGII
                     SPNTPIYCAGKKNYYGRDFRCDKPTGHGSLSMVQAIAQSCDVYFYELASRMDVDDIYA
                     TAEKYGLTERTGIDLPQEKRTRIPSRAWKRKASPRDPKWYAGETISVGIGQGAVGVTP
                     IGLARFYAMLATRGKVLTPHLFYGFRSDQSNELDPAAAPAAQDTPLDARHWAILDEGL
                     AEVVQSGTAGANPFIREIAKVIPFSGKTGTAQVATFVDKAHYARQAKKLKDHALFAGY
                     APREHPQIAFAVVVENAGFGSTAAAPIAAKLVKYWFVDRLSNPLPAPRGKMVDPFAPE
                     KTEAPE"
     gene            complement(4787..5275)
                     /locus_tag="VK150_06735"
     CDS             complement(4787..5275)
                     /locus_tag="VK150_06735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31040.1"
                     /translation="MRLPPPTATRQNLLCAAALGLVFLSAPFPRFQPIVHAVLVLALA
                     PRAGEPLAPALWALAAGWTLEGSLRLYPHLGGTAWADLTLTLLAGWMAGRWPLESLKG
                     WITRLSALAILHALLVHGAVRLAVGPHPWGRGWLWVLVTVPLWGWASWRLLHAGPASG
                     RR"
     gene            complement(5272..>5863)
                     /gene="mreC"
                     /locus_tag="VK150_06740"
     CDS             complement(5272..>5863)
                     /gene="mreC"
                     /locus_tag="VK150_06740"
                     /inference="COORDINATES: protein motif:HMM:NF016011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005618 - cell wall [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HLP31041.1"
                     /translation="RMAEADAAVRLLGLKQQIPLELKAARVMFSTRPATFGGLILDRG
                     HDLGLVPDQGVLVPEGIVGRLWSVSATQSKVLPADAPNASVAVMLIRSRATGVLQGLG
                     SGRAVIRYVSNQEVVQVGEAVMTSGLDRVFPRGLLVGYVAEVAQGDLELRVVVNLSAP
                     LDRITTVLLLPPQPPLEVQPPFFAPEQKPQRKRGTP"
BASE COUNT          962 a         2009 c         2013 g          879 t
ORIGIN      
        1 cacctcgccg gacaggggca ggccagaaag atcccggggc gccggcgccg cgggccgcac
       61 ctccagcgcc gacaaccgcg ccggcaggtc cggatgcagc gcggcgaagg cccgcagcgc
      121 ggcggccacc ttcggcccca cctcctccac aacctgcagg cgctgctcgt cggcggccca
      181 caggctttcc agcgaagggt aggcctcggc gagaagttct gccgtgcggg cccccaccat
      241 cggaatgcca agggcgtgaa tccagcggga gagcggcttg acgcgggcgg cctccatcgc
      301 gtcgagcagg ttctgcgcgg acttctccgc catgcggtcg aggcccgaga ggtacgccag
      361 gcccgggcgg ggatccgcca gaagcgtgaa cacctcccag ggctgttcga agcggccaga
      421 ggccaccagc tgctccacca gcgcctcgcc catgccctcg atgtccaggg ccgagcggcc
      481 gccgaagtgc agcaggcgag ccacgagctt ggcggggcac tccgggttga ggcagcggat
      541 cgccacctcg gcgtcgtcgg ccttgcccac ctcgccagcg cacaccgggc aggtttccgg
      601 aacgacgggc gccggcaagt cccgggtttc ttcccccggc acgagggcca ccaccttcgg
      661 aatcacctcg ccgcccttct cgatgaacac gcggtggccg atcctcagcc cgagccgcgc
      721 cagctcgtcg acgttgtgga gcgtggcgcg gcgcaccgtg gaccccgcca cctccaccgc
      781 ctccagctcc gccactggcg tgagcttgcc cgaacggccc acctgccagg tgatgcccag
      841 aaccgtggtg gtcacctggg tggcgggata cttgaaggcg atggcccagc ggggaatccg
      901 gtcggtggcg ccgaggcgct tctggacctc aaaatccagc accttcagta cgacaccgtc
      961 agtatcgaag ggaagtttca aacgtgcttc agcttggatt tcaataaaac ggagcatctc
     1021 cttcatcgtc ccgaactccc gggcgggcat tcgggaaaaa ccccactcct caatctgtgc
     1081 catggccgcg gcctgatcac tctgtggagg cgcaggccag acatcttccc aaatcgcctg
     1141 ccagggaagg aatgaaagaa ctcggttctg gacctccttg gagtcgagca gcttcatcgt
     1201 tccgctggca gcgttgcgtg gattggcgaa ccggggttca ccgcgcgcat ctcgttggag
     1261 attcaattcc tcccaacgct tgcgcgagag aaacacttct cctcgaacgg taaggtgagt
     1321 cgggatggca ttcccgcgaa gcaccttcgg aatgtcggaa attgtccgtg cgttctccgt
     1381 taccagttca ccagtttctc cgtcaccccg agtgagcgcc tccaccagta gaccattttc
     1441 gtatcggagc gacagggaca gcccatcgac cttgagctcc gccgcgtacc tcgcctctgc
     1501 ttccggcgcg agtttccgcc agcgggcctc ccactcgagg agttccgatt cggagtaggc
     1561 gttgtccagg ctgagcatcg gcaccgcgtg gcgccgcttc tcgaaggcgt ccaccggcgg
     1621 agcgcccacc cgcagggtcg ggctgttggg atcggccagg tcggggtgcg ccacctccag
     1681 gtcgcgcagc tcgcgctcca gggcgtcgta ctcggcgtcc gagaccacgg gctggtccag
     1741 cacgtagtac cggtggcggt gcgagcgcac ctgatcggcc aggtccttca tccgctgccg
     1801 caggtcggtc atttcaccct cgaacgatgc aggatgccca tgatgaggcc cagggccagg
     1861 aagaagctca gggtgctgct gcccccggcg ctgaagaagg gcagcaccat gcccttgttg
     1921 ggcagggcgc ccgccaccat gcccacgttc accagcaggt gcagggcgaa gatgccggcg
     1981 gccccggcgc agaagtaagc ttcggcgttg gtgtgggcgg cccgggccgc gtccaggatg
     2041 cggctcagca gaaggccgaa gagcccgagc gccagcagca cgcccaggaa accgcgctct
     2101 tccgcccaca cgctgaaggc gaaatccgtg gtctttacgg gcaggaagtt cagctgggtc
     2161 tgggagccgc tggtgaagcc tttgccgatg agcccgccgg agccgatggc gatgcggctc
     2221 tggttcacct ggtagccctt gccctgaagg tcggaggatg ggtcgaggaa gatcatcacc
     2281 cgctgcttct ggtagggctt cagggcgacc ttccaggcgc cgacgccccc cacgaccacc
     2341 aggaggagga gggctaccac ccaccgggcc cggagccctt tcatcagcgg gatgatgagg
     2401 aggatcggca gaaagctgag ggccatgccc agatccggct ggcgctggat gagcagcatg
     2461 ggaaagacca ccaggcccag ggcgccgaag agttccaggc ggcccaccgc gtccgccggc
     2521 cgcgagccca gccggtggga cacgtagagc agggtgatcc acttcatcag ctcagagggc
     2581 tggaaggtct gccccgccac cacgaaccag cgggtggaac cgccgatctt cttgcccacc
     2641 accagcaccg cggccagggc caccaggccg aggaggtagg ccgggaagct gtagcggaag
     2701 acgcggcggg gatccatggt ggcaaggatc agcatcaagg ccatgcccag caggttccag
     2761 acgctctgct tgagccagat ccccgcctgg ggggtgttgc ggcccgccga gtagagggtc
     2821 agggtcccca gggcgatgag ggccacgatc acccagagaa ggcgcgggtc cagggcccgg
     2881 atgcgctccc tcattcgggg gcctccgtct tctcgggggc gaagggatcg accatcttgc
     2941 cgcgcggagc cggcagtgga ttggacaggc gatccacgaa ccagtacttc accagcttgg
     3001 cggcgatggg cgccgcggcg gtggagccga agcccgcgtt ctccaccacc acggcgaagg
     3061 cgatctgggg gtgttcccgg ggcgcgtatc ctgcgaagag ggcgtgatcc ttcagcttct
     3121 tcgcctggcg ggcgtagtgg gccttgtcca cgaaggtggc cacctgggcc gtgccggtct
     3181 tgcctgagaa ggggatgact ttcgcgatct cgcggatgaa ggggttggcg cccgcggtgc
     3241 cgctctgcac cacttcggca aggccctcgt ccaggatcgc ccagtgcctg gcgtccaggg
     3301 gcgtgtcctg cgcggcgggc gccgcggccg gatccagctc attgctctgg tccgaacgga
     3361 atccgtagaa caggtgtggc gtgagcacct ttccccgggt cgccagcatg gcgtagaacc
     3421 gcgcgaggcc aatgggcgtg acgccgacgg cgccctggcc gatgcccacg ctgatggtct
     3481 caccggcata ccacttggga tcccggggcg aggccttgcg cttccaggcc cggctcggaa
     3541 tccgggtgcg cttctcctgg ggcaggtcga tgcccgtgcg ctccgtgagg ccgtacttct
     3601 ccgcggtggc gtagatgtcg tccacgtcca tgcgggaggc cagctcgtag aagtagacgt
     3661 cgcagctctg cgcgatggcc tggaccatgg acaggctccc gtgcccggtg ggcttgtcgc
     3721 accgaaagtc gcggccgtag taattcttct tgccggcgca gtagatgggg gtattcggag
     3781 agatgatgcc cttctccagg gcggcgagcg ccaccagcaa cttgaaggtc gaacccggcg
     3841 cgtagatgcc ctggatggcc cggttcacca tgggcttggt gacgttgttg gccaggtacc
     3901 ggtccaccat gtcctggctc aggcggttga ggaacaggtt gggatcgtac gaggggctcg
     3961 agtacatcgc cagcacgccg ccgtcgcgga gatcgagcac gaccgcggcg ccggcctcct
     4021 cgccgaaggc atcctgcgcg accttctgga gccccgcgtc gagggtgagg tagaggctcc
     4081 gcccggccac ggcgtccacc tgtccgaagt tcgcgacctc ggtgccgagc tggtccacca
     4141 ggatgcgttt ctggccatcc acgcccttga gcttgtcatt gccgctggcc tcgaagcctt
     4201 ccttgccgat ggtctcgccc agccggaata tcccaggctt cgccttcatc agctcttcgt
     4261 ccacttcgcc cacgtacccc agcaggtggc ccgcgagctc atcgccaaga tagacccgcc
     4321 ggggcgccac ctccacgctg aggaagggga atcgggcgcg gacccgctcg gcgagggcga
     4381 tgccggcttc gtcgaggttc tccttcagca ccaggggacg gcccttcccg gccaggcggt
     4441 agatctgcac cttcctggcc agcgcggcgg gatccaggtt cagcgcctcg gcgagggagg
     4501 ccaccacctc ggccttcgcg ggcaggtcct cccgctggac cacgaggtgc agcgcccgcc
     4561 ggttgtccac cagccgatgc ccgttgcggt ccagcaccag ccctcggggc gcgggcaggg
     4621 gccggatctt caccgcctgc tgcatggcga gctgcttgaa ctcaccctgg cgcaccagct
     4681 gcagccaggc gtagaccagc accagcaggg ccaccaggct ccaggccagc accttgaaga
     4741 ccccgagcct gcggtggagg atggggcgtt gccgaggatc catggttcag cgccgtccgg
     4801 aagccgggcc ggcatgcagg agccgccagg acgcccagcc ccacaggggg accgtgacca
     4861 gcacccagag ccagccgcgg ccccagggat gggggcccac cgccagccgc acggccccat
     4921 gcaccagcag ggcatggagg atcgccaggg cggacaggcg ggtgatccag cccttcaggc
     4981 tttccagggg ccagcgccca gccatccagc ccgccagcag cgtgagggtg aggtccgccc
     5041 aggccgtgcc ccccaggtgg gggtagaggc gcagggaacc ctccagggtc cagccggccg
     5101 ccagcgccca caaggcgggc gcgagcggtt cgccggcccg gggcgccagc gccagcacca
     5161 ggaccgcatg gacaatgggc tggaagcggg ggaacggcgc gctcaggaag accaggccca
     5221 gcgcggcggc gcagaggagg ttctggcgcg tggccgtggg cggcggaagc ctcatggcgt
     5281 cccccgtttc cgttgtggct tctgctccgg ggcgaagaac ggcggctgca cttccagcgg
     5341 aggctgcggc ggcagcagca ggacggtggt gatccggtcg aggggcgcgg agaggttgac
     5401 caccacgcgc agttccagat cgccctgggc cacctcggcg acgtacccca ccaggagccc
     5461 ccgggggaag acccggtcca ggccgctggt catcacggct tcgcccacct gcaccacctc
     5521 ctggttgctg acgtagcgga tgacggcccg gcccgagccc aggccctgca gaacgcccgt
     5581 ggcccggctg cggatgagca tcaccgccac cgaggcattg ggcgcgtcgg cgggcagcac
     5641 cttggactgg gtggcgctca cggaccagag acggcccacg atgccctcgg gcaccagcac
     5701 accctggtcg ggcaccaggc ccaggtcgtg gccccggtcg aggatcaggc cgccgaacgt
     5761 cgcgggccgg gtactgaaca tgacgcgggc ggccttgagc tccaggggga tctgctgctt
     5821 gagccccagc aggcgcacgg ctgcgtccgc ctcagccatc cgg
//
LOCUS       DATGWW010000468         1941 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_444398, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000468 DATGWW010000000
VERSION     DATGWW010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444398"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..703
                     /locus_tag="VK150_06745"
     CDS             56..703
                     /locus_tag="VK150_06745"
                     /inference="COORDINATES: protein motif:HMM:NF013982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HLP31042.1"
                     /translation="MSLNALMRWLKPREMVFFDLLESAAGNAYQASQLFDLEIRTGDP
                     VRFAELRRQMKDLEHTGDDITREIMDRLNHTFVTPIEREDIMELAHALDDVVDKIHAV
                     CERLILYRISHVMPAVTEMSSIIVEGSGELLHLIRSLRNMSNQKEIRDRIQRVHTLEN
                     KADSIYHAGLAQIFENPKDPIELIKWKELLEQIEDATDKIELVAKVVGSTVMRNA"
     gene            712..1707
                     /locus_tag="VK150_06750"
     CDS             712..1707
                     /locus_tag="VK150_06750"
                     /inference="COORDINATES: protein motif:HMM:NF013543.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HLP31043.1"
                     /translation="MVLALVLIVLLALLFDYINGFHDTANAIATVVSTGVLSARKAIL
                     MAGVLNFGGALMGTQVATTIAKGIADSQFVVPAVIVAALMAAIVWNLITWWLGIPSSS
                     SHALVGGLAGAVVAQAGLGALHTTKLKEVATFLVVSPVVGFFIAMVIIIFLLWICRRL
                     AGHRVNIAFRKLQLVSAGAMAFTHGTNDAQKAMGIIALALITYGKLEAHGAKVDVPIW
                     VKLACATAMGLGTMSGGWKIIKTMGSKIVKLRPIHGFAAETSAAIVLFTTAHLGIPVS
                     TTHVISGAIMGVGASMNVSAVRWGVAGNIVVAWVLTIPISALLAAGFLKLVTPLF"
BASE COUNT          346 a          694 c          561 g          340 t
ORIGIN      
        1 ctcctgtaac cccgccggac ccggtacagt tgaaggttga tcgcgggagt ccccaatgtc
       61 cttgaatgcc ctgatgcgct ggctgaaacc ccgggagatg gtcttcttcg acctgctcga
      121 gtccgccgcc ggcaacgcct accaggcctc ccagctcttc gacctggaga tccgcaccgg
      181 tgaccccgtc cgcttcgccg agttgcgccg gcagatgaag gacctcgagc acaccggcga
      241 tgacatcacc cgcgagatca tggatcggct gaatcacacc ttcgtgaccc ccatcgagcg
      301 cgaagacatc atggagctgg cccatgccct cgacgacgtg gtcgacaaga tccacgcagt
      361 ctgcgagcgg ctcatcctct accggatcag ccacgtcatg ccggccgtca ccgagatgag
      421 ctcgatcatc gtcgagggtt ccggtgagct cctgcatctc atccgctccc tgcgcaacat
      481 gtccaatcag aaggaaattc gggaccgcat ccagcgggtg cacactctgg aaaacaaggc
      541 cgactccatc tatcacgccg gcctggccca gatcttcgag aatccgaagg atcccatcga
      601 actcatcaag tggaaggaac tgcttgagca gatcgaggac gcgaccgaca agatcgagct
      661 cgtggcgaag gtcgtcggct ccactgtcat gcgcaacgcc tgaggacatc catggtcctc
      721 gcccttgtcc tgatcgtcct gctggccctg ctgttcgact acatcaacgg cttccacgac
      781 acggccaacg ccatcgccac cgtggtatcc accggggtgc tctccgcacg caaggccatc
      841 ctgatggccg gcgtcctgaa cttcggcggc gccctcatgg gcacccaggt ggccaccacc
      901 atcgccaagg gcatcgccga cagccagttc gtggtacccg cggtgatcgt ggcagccctg
      961 atggcggcca tcgtgtggaa cctcatcacc tggtggctcg gcatcccctc cagctccagc
     1021 cacgccttgg tggggggcct cgccggcgcg gtcgtggccc aggcaggcct cggagccctg
     1081 cacaccacca agctgaaaga ggtggccacc ttcctcgtgg tgtcgccggt ggtgggcttc
     1141 ttcatcgcca tggtcatcat catcttcctg ctctggatct gccggcgcct ggccggccac
     1201 cgcgtgaaca tcgccttccg caagctccag ctggtctcgg ccggagccat ggccttcacc
     1261 catggcacca atgacgcgca gaaggccatg ggcatcatcg ccctggcgct catcacctac
     1321 ggcaagctcg aggcccacgg cgcgaaagtg gacgtgccca tctgggtgaa gctggcctgc
     1381 gccacagcca tgggcctcgg caccatgtcc ggcgggtgga agatcatcaa gaccatgggc
     1441 tccaagatcg tgaagctgag gcccatccat ggcttcgccg ccgagacctc ggctgccatc
     1501 gtgctcttca ccaccgccca cctcggcatc cccgtgagta ccacccacgt gatctccgga
     1561 gccatcatgg gcgtgggcgc cagcatgaac gtctctgccg tccgttgggg cgtcgccggg
     1621 aacattgtcg tggcctgggt tctcaccatc cccatcagcg ccctgctggc cgcagggttc
     1681 ctgaagctgg tgacgccgct cttctaggcc gtcgcaggca tttcccgcag agttcgcgcc
     1741 gcggacgcac agccgtcatg tccggatccg accctggtcg cagaaccagg gaggcacggc
     1801 atgacgatcg aaaccctcgc accccatcca gaaggcgccc gctacaccgt ccggccgctg
     1861 accagctccg atttcgccca cctgcgccga ctggagggcg agatctggtc cggcgatggc
     1921 accggggagc tctgccccca c
//
LOCUS       DATGWW010000469         2140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_82126, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000469 DATGWW010000000
VERSION     DATGWW010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82126"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1053)
                     /gene="nth"
                     /locus_tag="VK150_06755"
     CDS             complement(<1..1053)
                     /gene="nth"
                     /locus_tag="VK150_06755"
                     /inference="COORDINATES: protein motif:HMM:TIGR01083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HLP31044.1"
                     /translation="MRTPKPDPGELQRRLRAAYPDAQCALDHQDPFQLVVATILSAQC
                     TDARVNLTTPALFARFADAAALAGARQEAVEALVKSTGFFRNKARNLIGLGQALVARH
                     GGQVPSDPAALAALPGVGQKTANVVLANAFGVPALAVDTHIFRVARRLGLSKAPTPEK
                     VEADLCRRFPRENWIELHHQLIFHGRRTCDARRPDCAACPLLDLCPTGLGKLKDPHLG
                     IRFEAPSQDLPASALVPRLASARGPQRIVSLVPSVTELLVQWGLAARLVGRTRYCIEP
                     RWIRNTVPTVGGTKDPDLARIRDLAPDLVILEQDENPKAVAEALTALGIPWLALEIRT
                     VRDCVRGLRLLGDRLGA"
     gene            1125..1985
                     /locus_tag="VK150_06760"
     CDS             1125..1985
                     /locus_tag="VK150_06760"
                     /inference="COORDINATES: protein motif:HMM:NF014881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 5,10-methylenetetrahydrofolate
                     dehydrogenase/5,10-methenyltetrahydrofolate
                     cyclohydrolase"
                     /protein_id="HLP31045.1"
                     /translation="MPTTLTGKLDCQETARHYLELVRSNVKKLGFSPGLGVILGSSDP
                     GSVTYQHWLMKDCEDLGINAADLRVENGMQMVKLIARLNQDEKTQGVFIFYPLRYPEI
                     KDDEVMDLVDPSKDIEGLHAINIGFLTKYRKRMDDGTQHRCMTPCTARAIVKTLKRGF
                     GEGWLAGKTVLVINDSLRIGRPLTAMVANLKATPILCHANTNKEHLEGFIRVADVIVS
                     AVPAAGYRINTEWIKDGALCFDLSGEGNFDYEALERRGIPFTDTTKNSVGKVTRAMAL
                     LNLTYACGVE"
BASE COUNT          363 a          714 c          771 g          292 t
ORIGIN      
        1 ggcgcccagc cggtcgccga gcagccgcag gccccggacg cagtctcgga cggtgcggat
       61 ctccagggcg agccagggaa tgcccagggc cgtgagggcc tcggccacag ctttcgggtt
      121 ctcgtcctgt tccaggatca ccaagtccgg cgccaggtcg cggatgcgcg ccaggtcggg
      181 atccttggtg ccgcccacgg tgggtaccgt gttgcggatc cagcgcggct cgatgcagta
      241 gcgcgtgcgg cccaccaggc gcgccgcgag cccccactgc accaggagtt ccgtcaccga
      301 gggcaccagg ctcacgatgc gctgtgggcc acgcgccgag gccagtcggg ggaccagggc
      361 ggaggccggg agatcctggc tgggcgcttc gaaccggatc ccgaggtgcg gatccttcag
      421 cttccccagg cccgtggggc agaggtccag cagggggcag gcggcgcaat cggggcggcg
      481 ggcgtcgcag gtgcgccggc cgtggaagat gagctggtgg tgcagctcga tccagttctc
      541 ccggggaaaa cggcggcaga ggtcggcctc caccttctcg ggcgtggggg ccttcgagag
      601 ccccaggcgt cgcgccactc ggaagatgtg ggtgtccacc gccagcgcgg gcacgccgaa
      661 ggcattggca aggaccacgt tggcggtctt ctgccccacg ccgggcaggg ccgccagggc
      721 cgcggggtcg gagggcacct gcccgccgtg ccgcgccacc agcgcctgtc cgaggccgat
      781 gaggttccgg gccttgttgc ggaagaagcc ggtggacttc accagggcct ccaccgcctc
      841 ctgccgggcg ccggccaggg ccgcggcatc ggcgaaccgg gcgaagaggg cgggcgtggt
      901 gaggttcacc cgggcatcgg tgcactgggc gctgaggatc gtggccacca cgagctggaa
      961 gggatcctga tggtccaggg cgcactgggc gtcggggtag gcggcgcgaa ggcgccgctg
     1021 gagctcgccg ggatcgggtt tcggggtgcg catggctcca ggataaagcg ggcgcctccg
     1081 ccggaggtgg cgggtttcga tagactggag ggctgaggtg ccgcatgccc accacgctca
     1141 cgggaaagct cgactgccag gaaaccgccc gtcactacct ggagctggtc cgatcgaacg
     1201 tgaagaagct gggcttctca ccggggctgg gcgtcatcct cgggtccagc gaccccggca
     1261 gcgtcaccta ccagcactgg ctcatgaagg actgcgagga cctgggcatc aacgcggcgg
     1321 atctgcgcgt cgagaacggc atgcagatgg tcaagctcat cgcccgcctg aaccaggacg
     1381 agaagaccca gggcgtgttc atcttctatc ccctgcgcta ccccgagatc aaggatgacg
     1441 aggtgatgga cctggtggac cccagcaagg acatcgaggg cctgcacgcc atcaacatcg
     1501 gatttctcac caagtaccgg aagcgcatgg atgacggcac ccagcaccgc tgcatgacgc
     1561 cgtgcacggc ccgggccatc gtgaagaccc tcaagcgcgg cttcggcgag ggatggctgg
     1621 cgggcaagac cgtgctggtg atcaacgaca gcctgcgcat cgggcggccc ctcaccgcca
     1681 tggtggccaa cctcaaggcc acgcccattc tctgccacgc gaacaccaac aaggagcacc
     1741 tggagggctt catccgcgtg gccgacgtca tcgtcagtgc cgtgcccgcc gccgggtacc
     1801 gcatcaacac cgagtggatc aaggacggcg ccctgtgctt cgacctcagc ggcgaaggca
     1861 acttcgacta cgaggccctc gagcgccgcg gcatcccctt cacggacacc acgaaaaaca
     1921 gcgtggggaa ggtcacccgg gccatggcgc tgctcaacct cacctacgcc tgcggagtcg
     1981 agtaggcctc agaaccggaa ggtcagggcc aggccgaggt tgctccgccg gcggaccttc
     2041 aggccgtcgg tgaagggccg ctccaggtgc tcgccctcga ggctcacggc ccaggacggg
     2101 tggaaggccc agcccacccg caggcggggg ccgatgaagc
//
LOCUS       DATGWW010000470         1847 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_308800, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000470 DATGWW010000000
VERSION     DATGWW010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308800"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            197..>1847
                     /gene="glmS"
                     /locus_tag="VK150_06765"
     CDS             197..>1847
                     /gene="glmS"
                     /locus_tag="VK150_06765"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: protein motif:HMM:NF001484.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HLP31046.1"
                     /translation="MGYIGQQGAAGVLVNGLRSLEYRGYDSAGVALASGSGTFNIVRA
                     SGKLANLAGKVDLSDPTPLGIGHTRWATHGRPTEENAHPHRSADGQVVAVHNGIFENF
                     LELRQELKAAGETFQSETDTECFPVMVSHLMKQGRPFAEAFREAVGRMRGIYALACLH
                     ATDPNRILAARSGPPMVLGLGEGETFLASDVVPLLPHTRRVIFLEDGDLVELTREGAR
                     ITRLDGAEVQRQVHTIPYDPVAAEKGGHKHFMQKEIFEQPQALSNTLLNRLPLDGEEI
                     PLSLPFTAQELAALTRIHIVACGTSWHAGLVGKFLIEQLSRVAVEVDYASEYRYREPV
                     IQPGTLIIGITQSGETADTLAAMKEAAARGARTLAICNVMGSTATRQCEATILTHAGP
                     EIGVASTKAFTTQLAVLTLLALKLGEAKGTVEPVLKQELLQGLRELPAHLERLNSLEP
                     KIMQWASRWKEATDFLYLGRGPCYPIALEGALKLKEISYIHAEGYPAGEMKHGPIALI
                     DQSLPVVALMPRDAHRDKTLSNLQEAAARGARTLAICNVMGS"
BASE COUNT          308 a          705 c          587 g          247 t
ORIGIN      
        1 cccgccggag ttcccgccgc gccccccgtc ccgcctggga ttcatgccct gcgggccttt
       61 ccgctgaagt gaggccgatc cgccacaggg cgtgtgcgcg cctccacctc aggcggggtt
      121 caaggcacca cattggatcc ccggcgccat cccgctaagt tggagccagt gatcgggggc
      181 ggccatgtgc ggaatcgtgg gatacatcgg acagcagggc gccgcgggcg tgctggtgaa
      241 cggccttcgc agcctggaat accgcggtta tgacagcgcc ggcgtggcgc tggcctcggg
      301 gagcgggacg ttcaatatcg tccgcgcctc gggcaagctg gccaacctcg cgggcaaggt
      361 ggacctttcc gaccccacgc cgctgggcat cggccacacc cgatgggcca cccacggccg
      421 gcccaccgag gagaacgccc acccgcaccg cagcgccgac ggccaggtgg tggccgtcca
      481 caacggcatc ttcgagaact tcctcgagct gcgccaggag ctgaaggccg ccggcgagac
      541 cttccagtcc gagacggaca cggagtgctt ccccgtgatg gtgtcccacc tcatgaagca
      601 gggacggccc ttcgccgagg ccttccgcga ggccgtgggc cgcatgcggg gcatctacgc
      661 cctggcctgc ctccacgcca ccgatccgaa ccgcatcctg gccgcccgga gcgggccacc
      721 catggtgctg ggcctgggcg agggcgagac cttcctcgcc tccgacgtgg tgcccctgct
      781 gccccacacc cgccgcgtga tcttcctcga ggatggcgac ctggtggagc tcacccgcga
      841 gggcgcccgc atcacgcggc tggacggcgc cgaggtgcag cgccaggtcc acaccattcc
      901 ctacgacccc gtggcggccg agaagggcgg ccacaaacac ttcatgcaga aggagatctt
      961 cgagcaaccg caggccctct ccaacacact gctcaaccga ctgccgctgg acggcgagga
     1021 gatccccctg agcctgccct tcacggcgca ggagctcgcg gccctgaccc gcatccacat
     1081 cgtggcctgc ggcaccagct ggcacgccgg cctggtgggc aagttcctca tcgagcagct
     1141 cagccgcgtg gccgtggaag tggactacgc cagcgagtac cgctaccgcg agccggtgat
     1201 ccagcccggc accctcatca tcggcatcac ccagagcggc gagaccgccg acacgctggc
     1261 ggccatgaag gaggccgccg cccgcggcgc acgcaccctg gccatctgca acgtcatggg
     1321 gtccaccgcc acgcggcagt gcgaggccac gatcctcacc cacgcgggcc cggaaatcgg
     1381 ggtggcctcc accaaggcct tcaccaccca gctggccgtg ctcacgctcc tcgccctcaa
     1441 gctgggcgag gccaagggca ccgtcgagcc cgtgctgaag caggaactgc tgcagggcct
     1501 gcgcgagctc cccgcccacc tggagcggct caacagcctg gagccgaaga tcatgcagtg
     1561 ggcctcccgc tggaaggaag ccaccgattt cctctacctc ggccgcggcc cctgctaccc
     1621 catcgccctg gaaggcgcgc tgaagctgaa ggaaatctcc tacatccacg ccgagggcta
     1681 cccggcgggc gagatgaagc acggtcccat cgccctcatc gaccagtcgc tgcccgtggt
     1741 ggcgctcatg ccccgggatg cccaccgcga caagaccctc agcaacctcc aggaggccgc
     1801 cgcccgcggc gcacgcaccc tggccatctg caacgtcatg gggtcca
//
LOCUS       DATGWW010000471         2643 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_444616, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000471 DATGWW010000000
VERSION     DATGWW010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2643
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444616"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1016
                     /gene="thiC"
                     /locus_tag="VK150_06770"
     CDS             <1..1016
                     /gene="thiC"
                     /locus_tag="VK150_06770"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: protein motif:HMM:NF009895.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HLP31047.1"
                     /translation="QALEKVDGKAEELTWEMFRDTLIEQAEQGVDYFTIHAGVLLRYV
                     PLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEDICDIMKAYDVAFSLGDGLRPG
                     STADANDEAQFGELETLGELTKIAWKHDVQVMIEGPGHVPMHLIQENMTKQLAVCDEA
                     PFYTLGPLTTDIAPGYDHITSAIGAAMIGWWGCAMLCYVTPKEHLGLPNRKDVKDGVI
                     AYKIAAHAADLAKGHPGARIWDDAMSKARFEFRWEDQFNLALDPDTAREFHDETLPAE
                     GAKSAHFCSMCGPHFCSMKITEDVRQYAESHGYSEKEALEKGMEEMAETFVTKGAEVY
                     QKA"
     gene            1073..1492
                     /locus_tag="VK150_06775"
     CDS             1073..1492
                     /locus_tag="VK150_06775"
                     /inference="COORDINATES: protein motif:HMM:NF023540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative metalloprotease CJM1_0395 family
                     protein"
                     /protein_id="HLP31048.1"
                     /translation="MAISAVSGASTPSLTGVTDPAQARILADLRARDRQVRAHEAAHL
                     AAAGGLARGGASFTYTRGPDGRNYATGGEVSIDATAADTPSATLAKAQQIQAAALAPA
                     DPSPQDRSVAAAAATMAARARRDLQTSGPGQLLDTTA"
     gene            1581..2162
                     /locus_tag="VK150_06780"
     CDS             1581..2162
                     /locus_tag="VK150_06780"
                     /inference="COORDINATES: protein motif:HMM:TIGR01382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HLP31049.1"
                     /translation="MAGKRILMLVGDFGEDYEIMVPFQALLAVGHTVHAVCPDKKAGE
                     SVATAIHDFEGHQTYSEKPGHRFTLNATFAEVKGDQYDALVIPGGRAPEYLRLNPKVL
                     DLVRHFFTAKKPVAAICHGAQLLAAAGVLEGRTCSAYPACRAEVEVARGTYAEIAIDG
                     AVTDGNLVTAPAWPAHPAWLAQFLQVLGTRITL"
     gene            2254..>2643
                     /locus_tag="VK150_06785"
     CDS             2254..>2643
                     /locus_tag="VK150_06785"
                     /inference="COORDINATES: protein motif:HMM:NF013813.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31050.1"
                     /translation="MPPTLAFSKYHALGNDYVVLDPTRSAFEPTTLLVQALCNRHRGI
                     GADGILFGPLPVSGEAGAFGLRVFNPDGSESEKSGNGLRIFARYLLEAGHTQGPDCRI
                     HVSGGLAEVHYLEGDGSLVQVDMGLPSF"
BASE COUNT          451 a          994 c          817 g          381 t
ORIGIN      
        1 atcaggcgct cgagaaggtc gacggcaagg ccgaggaact gacctgggaa atgttccgcg
       61 acacgctgat cgagcaggcc gaacagggcg tggactattt caccatccat gccggcgtgc
      121 tcctacgcta cgtgccgctg accgccaagc gcgtgaccgg tatcgtcagt cgcggtggct
      181 ccatcatggc caagtggtgc ctggcgcacc acaaggagaa cttcctctac acgcacttcg
      241 aagacatctg cgacatcatg aaggcctacg acgtggcgtt ctcgctcggc gacggcctgc
      301 gccccggcag cacagcggac gccaacgacg aggcccagtt cggcgagctg gagaccctcg
      361 gcgagctgac caagatcgcc tggaagcacg acgtgcaggt gatgatcgag ggccccggcc
      421 acgtgcccat gcacctcatc caggagaaca tgactaagca gctggccgtg tgcgacgagg
      481 cccccttcta caccctgggc cccctcacca ccgacatcgc cccgggctac gaccacatca
      541 cctcggccat tggcgccgcc atgatcggct ggtggggctg cgccatgctc tgctacgtga
      601 cacccaaaga gcatctggga cttcccaacc gcaaggacgt caaggacggc gtcatcgcct
      661 acaagatcgc cgcccacgcc gcggacctgg ccaagggcca tcccggcgcc cgcatctggg
      721 acgacgccat gagcaaggcg cgcttcgaat tccgctggga ggaccagttc aacctggccc
      781 tcgatcccga caccgcccgc gaattccacg acgaaaccct gcctgccgag ggcgccaagt
      841 ccgcccactt ctgctccatg tgcggcccgc acttctgctc catgaagatc accgaggacg
      901 tgcggcagta cgcggagagc cacggatact ccgagaagga agcccttgag aagggcatgg
      961 aggagatggc cgagaccttc gtgaccaagg gcgccgaggt ctaccagaag gcctgatcca
     1021 tccccggggc cgagaccttg cctcccggtc ccggagggcg atcctgggat ggatggccat
     1081 ctccgcggtc tccggggcct cgaccccatc cctgacaggc gtcacggatc cggcgcaggc
     1141 ccggatcctg gccgacctga gggcccggga tcggcaggtg cgggcccacg aggccgccca
     1201 cctggccgcg gccgggggat tggcccgcgg cggcgccagc ttcacctaca cccggggccc
     1261 cgatggccgg aactacgcca cgggaggcga ggtttccatc gatgccaccg ccgccgacac
     1321 cccctcggcc accctggcca aggcccagca aatccaggcg gcggccctgg cccccgccga
     1381 cccctcgccc caggatcgca gcgtggcggc cgccgccgcg accatggccg cccgggcccg
     1441 ccgggacctc cagaccagcg gtccgggcca gctcctggac accaccgcct gatctgcagg
     1501 cgcctggaga ttccccggag gactagcatg gtggggtccg ggcctggccc gtcggccagc
     1561 cctctaccag gaggagtgac atggcaggca agcgcatcct catgctcgtg ggcgatttcg
     1621 gcgaggacta cgaaatcatg gtgcccttcc aggccctcct ggccgtgggt cacacggtcc
     1681 acgcggtctg ccccgacaag aaggccggtg aatccgtcgc cacggccatc cacgacttcg
     1741 aggggcacca gacctattcc gagaagccgg gccaccgctt cacgctcaac gccaccttcg
     1801 ccgaggtgaa aggcgaccag tacgacgccc tggtgatccc cggcggccgc gccccggaat
     1861 acctccgcct caacccgaag gtgctcgacc tcgtccgcca cttcttcacc gcgaaaaagc
     1921 ccgtggccgc catctgccac ggcgcgcagc tgctcgccgc cgccggcgtg ctggaggggc
     1981 gcacctgctc ggcctacccc gcctgccgcg ccgaggtgga agtggcccgc gggacctatg
     2041 ccgagatcgc catcgacggc gccgtcaccg acggcaacct cgtcacggcg cccgcctggc
     2101 cggcccatcc agcctggctc gcccagttcc tgcaggtgct cgggacccgc atcacccttt
     2161 gatccggact ggtgcgccgg gcgcgttgtc gcggatgctg ttggggggcc tttcgccctc
     2221 ggaaagccag ccttcagccc agaggacccg tccatgccgc ccacccttgc cttctccaaa
     2281 taccacgcgc tgggaaacga ctacgtcgtg ctggatccca cccggtccgc cttcgagccg
     2341 accaccctcc tggtccaggc cctttgcaac cgccaccgcg gcatcggcgc tgacggcatc
     2401 ctcttcggcc ccctcccggt ctccggcgag gcgggggcct tcggtctgcg tgtcttcaat
     2461 cccgacggca gcgaatcgga gaagagcggc aacggcctgc gcattttcgc ccgctacctc
     2521 ctcgaagccg gccacaccca gggaccagac tgccgcatcc acgtctccgg tggcttggcc
     2581 gaggtccact acctggaagg tgacggcagc ctcgtgcagg tggacatggg cctgcccagc
     2641 ttc
//
LOCUS       DATGWW010000472         2409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_82339, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000472 DATGWW010000000
VERSION     DATGWW010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82339"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..482
                     /locus_tag="VK150_06790"
     CDS             <1..482
                     /locus_tag="VK150_06790"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HLP31051.1"
                     /translation="SGNLYVNVHTAAFPGGEIRGQLNLSVPVIQTTTLNGSKEVPANA
                     STATGTASVGLQPFTLEVTGGVTTTGLTGTASHIHEAAAGVSGPVAFGLTDGGTGTWL
                     VPAGTRLTPSQFDAWRNGNLYVNVHTVAFPAGEIRGQLAPGGGTGGGGGGTGGGGGY"
     gene            complement(1019..1095)
                     /locus_tag="VK150_06795"
     tRNA            complement(1019..1095)
                     /locus_tag="VK150_06795"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1059..1061),aa:His,seq:gtg)
     gene            1205..>2409
                     /locus_tag="VK150_06800"
     CDS             1205..>2409
                     /locus_tag="VK150_06800"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HLP31052.1"
                     /translation="MKRQVKQVLGLSAFAAGCMALGMGLSHGWVAAAQEEKPVVVDAK
                     GMDRLPPIAEVAEKLNPTVVAITNTSFVKNRRGGFEHPQIGGQDFFDFFFGPGGPQQR
                     RLPRGGEDEQRAVSGGSGVIVSPQGEILTNYHVIASMGGADNALEVKTNDGKSYKATV
                     LGKDKELDIALIKIDAAHLPFAKLGDSDSLRIGEWVVAIGNPFGLEHTVTQGIISAKG
                     RKLDTGVSSFLQTDAAINRGNSGGPLLNLKGEVVGINTAINPAGQNIGFAVPISQVNR
                     ILKDLRSGKPVSRGYLGVGPAPELDQAYQDALGIKEGVVVSTVEKGQAADKAGVQRLD
                     VITAVDGQPVRSPDELVTAVSSRRAGETLKLTIWRDGKTLTLTATLGDRKALEDQRRR
                     EAGEEPEDEG"
BASE COUNT          402 a          822 c          837 g          348 t
ORIGIN      
        1 tgagcggcaa cctctacgtg aacgtccaca ccgcggcctt ccctggcggg gagatccggg
       61 gccagctgaa cctgagcgtc ccggtcatcc agaccaccac gctgaacggc agcaaggagg
      121 tcccagccaa tgcctccacc gccacgggca cagcgagcgt cggcctccag cccttcactc
      181 tggaggtgac cggcggcgtg acgaccacgg gcctcaccgg caccgcctcc cacatccatg
      241 aagccgccgc gggcgtctcg gggcccgtcg ccttcgggct cacggacggt ggcacgggca
      301 cctggctggt gccggccggc acccggctga cccccagcca gttcgacgcc tggcggaacg
      361 gcaacctcta cgtgaacgtc cacactgtgg ccttccctgc cggcgagatc cggggccagc
      421 tggcccccgg gggcggcacg ggtggcggtg gtggtggcac gggcggtggc ggtgggtact
      481 gaaccaggtc cgcctcctcc agggcgggca gggtaggtgg gcaggcccag gaacccgtga
      541 gggggacctg ggcctgtgtt tacgccggaa ataggcgccg ggggtggttc cgatcccggg
      601 accggccgca gcccgctgcg cggtctgccg atcccattcc ggccctcccc cggagggcct
      661 ccacgggctc actgtcgccg gttcgagtcc gggcgttcca gattgaaaag gcccccgtgt
      721 gggggtggtt ccgatcctgg gaccggccgc agcccgctgc gcggtctgcc gatcttgctc
      781 cgacagcgcc ccgcgctgtc tccgcaagct cactgtcgcc ggttcgagtc cgggcgttcc
      841 agattgaaaa ggcccccgtg cgggggtggc tccgatcccg ggaccggccg cagcccgctg
      901 tgcggtctgc cgatcccatt ccggccctcc cccggagggc ctccacgggc tcactgtcgc
      961 cggttcgagt ccaggcgttc cagattgaaa aggcccccgt gcgggggcct tttcaatctg
     1021 gggcggctga ccggactcga accggcgaca cctggaatca caatccagta ctctaaccaa
     1081 ctgagctaca gccgccgttg gaccatccag actatcctgg tcggctcggg atggccagtg
     1141 ggaaccttag gggcactgcg gccaccgaaa ggcatgccgg ggatccggtg aagcgaggag
     1201 atccatgaag cgtcaggtga aacaggttct ggggttgtcg gcctttgcgg ccgggtgcat
     1261 ggcccttggg atggggctca gccatggatg ggtggcggcg gcccaggagg agaagcccgt
     1321 ggtggtggac gccaagggca tggaccggct tccgcccatc gcggaggtgg ccgagaagct
     1381 caatccgacg gtggtggcca tcacgaacac cagtttcgtg aagaaccgcc ggggcggctt
     1441 cgagcatccc cagatcggcg gccaggattt ctttgatttc ttcttcggcc ccggcgggcc
     1501 ccagcagcgg cgcctgcccc ggggcgggga ggacgagcag cgggccgtct cgggcggctc
     1561 gggtgtgatc gtcagccccc agggcgagat cctcacgaac taccacgtga tcgccagcat
     1621 gggcggcgcc gacaacgctc ttgaggtgaa gaccaacgat ggcaagagtt acaaagccac
     1681 cgtgctaggt aaggacaagg agctcgacat cgccctcatc aagatcgacg cggcccacct
     1741 gcccttcgcc aagctgggag acagcgattc cctgcgcatc ggcgagtggg tggtggccat
     1801 cggcaacccc ttcggcctgg agcacacggt cacccagggc atcatcagcg ccaagggccg
     1861 caagctcgat acgggcgtca gctccttcct gcagaccgac gccgccatca accgcggcaa
     1921 ctccggcggt cccctgctga acctgaaggg cgaggtggtg ggcatcaaca ccgccatcaa
     1981 cccggcgggc cagaacatcg gcttcgcggt gcccatcagc caggtgaacc gcatcctcaa
     2041 ggatctgcgc agcggcaagc ccgtgagccg gggctacctg ggcgtgggcc ccgcccctga
     2101 gctggatcag gcctaccagg acgcccttgg catcaaggaa ggcgtggtgg tgagcaccgt
     2161 ggagaagggc caggccgccg acaaggccgg cgtgcagcgc ctggatgtca tcaccgccgt
     2221 ggacggccag ccggtgcgca gccccgacga gctggtaacc gcggtctcaa gccgccgtgc
     2281 gggggagacc ctgaagctca cgatctggcg ggatggcaag accctcaccc tcacggccac
     2341 cctgggcgac cgcaaggccc tggaggacca gcgccgccgc gaggcgggcg aggagcccga
     2401 ggatgaagg
//
LOCUS       DATGWW010000473         3246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_82407, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000473 DATGWW010000000
VERSION     DATGWW010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3246
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82407"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..1135
                     /locus_tag="VK150_06805"
     CDS             239..1135
                     /locus_tag="VK150_06805"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HLP31053.1"
                     /translation="MPAATAVLARRRLVARVELAGSALCFGLMAILARKLTLPGMGFS
                     AGHLAVLRFVVGALLSLVAFGLIPGLYRPSHYRLLVTRGLSGGAVVVLYFYALAHIPA
                     GEAGLLYNVFPVIATAMSLVIFKERPTIHLWLAILAASLGVGLVLGQGRLDFGFGRGQ
                     LAALAAAVFAATSANAIRAVRHTDNAATIFFFFCVAGLPVVLPFALTPWPGGLVPWLL
                     AGLMSLLAYGGQILMSEAYGTLSVSEAAVWLQLLPIVQYLLALPLLGERVTLPGLAGV
                     VITVAGVAYGTILGHRRREART"
     gene            complement(1178..1672)
                     /locus_tag="VK150_06810"
     CDS             complement(1178..1672)
                     /locus_tag="VK150_06810"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HLP31054.1"
                     /translation="MDAGGPKGKQKSDINVTPLIDIVLVLLIVFIVMVPGLSKAMKVV
                     VPQVVQTPTPPKPDPNNILIQVEQDGSMTLQQDKIDAEGIKAKLPDAVMLQPLNYRKV
                     FLKVDEDVKFQAMVDVLDAIRVASEEAKKKSLEQLDKFQGQDGGDVKVAVSLKKRVVA
                     APVS"
     gene            complement(1672..2175)
                     /locus_tag="VK150_06815"
     CDS             complement(1672..2175)
                     /locus_tag="VK150_06815"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HLP31055.1"
                     /translation="MDAGGGKAGGVKSDINVTPLVDIVLVLLIIFIVITPAVNNAVKI
                     PLAKHAPKVEQQQDAGQKYLTLMLTSKRNDKYEVTGPGAVLIDDKDAKDMRFFINEES
                     QRQQLEDFINRNVSQLNDKRVFVKADADLPFKYINELFQVCRKGGADEASIVTSEDKS
                     EKKEGGN"
     gene            complement(2235..2963)
                     /locus_tag="VK150_06820"
     CDS             complement(2235..2963)
                     /locus_tag="VK150_06820"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HLP31056.1"
                     /translation="MNLLSSPLMLALAEGGHDSFSPAELFRAASPANKGIIIILFILL
                     AYQIYVTVERFVTYAQSKQASDKFLKLFMDTLRRGDFEAAKRAATTHNKSHIALVLKH
                     GLDIFQYEKQLKTMNPNHDAIQPVERAIQRGTAEVIELLKKGMSGLATIGALAPFIGL
                     LGTVIGIIKVFSDLKTKGAGDINALAGSIGEALATTALGLVVAIPAVWMYNLLTNKQD
                     VVVTNINNAASQMIDEFIRRESQG"
     gene            complement(3018..>3246)
                     /locus_tag="VK150_06825"
     CDS             complement(3018..>3246)
                     /locus_tag="VK150_06825"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HLP31057.1"
                     /translation="PYPPLAKIAKIQGTVVVEIVVGPDGVPTSAVAKEGPPQLRPTAE
                     AYAMQWKFEPAMLNGAPQYARFKLTMPFRLR"
BASE COUNT          485 a         1002 c         1097 g          662 t
ORIGIN      
        1 cggggcatct gcaacctctg aagctgctgg aatcctggag ggaatgaggg aaagcagtta
       61 accgcagatg acgcagatgg cgcagatggg tgggaccatt ccgggcattc agcccgctcc
      121 aggcgccggg gattggatac ccgcctgacc cagccatctg tggaatctgt ggacctcatc
      181 ttttccatct gcgacatctg cggtttcaat ttcaggtcct ccgtccgatg atgcgggcat
      241 gcccgctgcc accgccgtcc ttgcccgccg ccgcctggtg gctcgggtgg aactggcggg
      301 ttcggcgctc tgcttcgggc tcatggccat cctggcgcgg aagctcacgc tgccgggcat
      361 gggcttcagc gcggggcacc tagccgtgct gcgcttcgtg gtgggggcgc tcctgagcct
      421 ggtcgccttc ggcctcatcc caggcctcta ccggcccagc cactaccgcc tgctggtgac
      481 ccgcgggctg tcgggcggcg cggtggtggt gctctatttc tacgccctgg cccacatccc
      541 ggcgggcgag gcgggcctgc tctacaacgt ctttccggtg atcgccacgg ccatgtcgct
      601 ggtgatcttc aaggagcgcc ccaccatcca cctctggctg gccatcctgg ctgcctctct
      661 cggggtgggg ctggtgctcg gacaggggcg gctggatttc ggcttcgggc gcggccagct
      721 cgcggcgctc gccgcggcgg tgttcgcggc caccagcgcc aacgccatcc gggccgtccg
      781 ccatacggac aacgccgcca cgatcttctt ctttttctgc gtggccggac tgcccgtggt
      841 gctgcccttc gccctcaccc cctggcccgg gggcctcgtg ccctggctgc tggcaggcct
      901 catgagcctg ctggcctacg ggggccagat cctcatgtcg gaggcctacg gaaccctgtc
      961 ggtctccgag gcggcggtct ggctccagct gctgcccatc gtccagtacc tcctggccct
     1021 ccccctgctg ggcgagcggg tgaccctgcc cgggctggca ggggtggtca tcaccgtggc
     1081 gggcgtggcc tacggaacca tcctgggcca tcgcaggcgg gaggcccgga catgaaaagg
     1141 gccccggatg gggccctttt catggatcga acggcgccta gctgacggga gccgcgacca
     1201 cccgcttctt cagggagacg gccactttca catcgccgcc atcctggccc tggaacttgt
     1261 cgagctgttc gagggacttc ttcttggctt cttccgaggc cacgcggatc gcgtcgagca
     1321 cgtccaccat ggcctggaac ttcacgtcct cgtcgacctt caggaagacc ttccggtagt
     1381 tgaggggctg cagcatcacg gcatcaggca gcttggcctt gatgccctcg gcatcgatct
     1441 tgtcctgctg cagggtcatg gatccgtcct gctccacctg gatcaggatg ttgttcggat
     1501 cgggcttggg cggggtgggg gtctggacga cctggggcac caccaccttc atggccttgc
     1561 tcaggccggg caccatcacg atgaagacga tgaggagcac cagcacgatg tcgatcaggg
     1621 gggtgacgtt gatatcagat ttctgtttgc ccttgggccc accggcatcc atcagttacc
     1681 cccttccttc ttttccgact tgtcctcgct ggtcacgatg gacgcctcgt cggcgccacc
     1741 cttccggcac acctggaaca gctcgttgat gtacttgaag ggcaggtccg catcggcctt
     1801 cacgaacacc cgcttgtcgt tcagctggga gacgttccgg ttgatgaagt cctccagctg
     1861 ctggcgctgg ctttcctcat tgataaagaa acgcatgtcc ttcgcgtcct tgtcatcgat
     1921 gagcacggcg ccggggccgg tcacttcgta cttgtcgttg cgcttggacg tcagcatgag
     1981 ggtcaggtac ttctgacccg cgtcctgctg ctgctccacc ttcggggcgt gcttggccag
     2041 cgggatcttc acggcgttgt tcacggcggg cgtgatcacg atgaagatga tcagcagcac
     2101 cagcacgatg tccacgagcg gcgtgacgtt gatatccgac ttgacgccac ccgccttacc
     2161 accacctgca tccatggtgt gtcctcctca tgaaagcgcc cgggggcctt cacccccggg
     2221 ctgggtggaa agtcttagcc ctggctctcg cggcggatga actcgtcgat catctgggaa
     2281 gccgcgttgt tgatgttggt gaccaccacg tcctgcttgt tggtcaggag gttgtacatc
     2341 cacaccgcgg ggatggcgac gacgaggccg agcgcggtgg tggcgagcgc ctcaccgatg
     2401 gagccggcca gcgcgttgat gtcgccagcg cccttggtct tcaggtcgga gaagaccttg
     2461 atgatgccga tcacggtgcc gagcaggccg atgaaggggg ccagggcgcc gatggtggcc
     2521 aggccgctca tgcccttctt gaggagctcg atgacctcgg cggtgccgcg ctggatggcg
     2581 cgctcgacgg gctggatggc gtcatggttg gggttcatgg tcttgagctg cttctcgtac
     2641 tggaagatgt ccaggccgtg cttcagcacg agggcgatgt ggctcttgtt gtgggtggtg
     2701 gcggcgcgct tggcggcctc gaagtcgccg cggcgcagcg tgtccatgaa gagcttgagg
     2761 aacttgtcgg aagcctgctt gctctgggcg taggtgacga agcgctccac ggtcacgtag
     2821 atctgatagg ccaggaggat gaacaggatg atgatgatgc ccttgttcgc cggagaggcc
     2881 gcccggaaga gctcggcggg ggagaagctg tcgtggccgc cctcggccag agcgagcatc
     2941 aggggggagg aaagcaggtt catgagtttt ccttgtggag gatggaagaa ggttgatgac
     3001 aggggaagtg gtgaggacta ccggaggcgg aagggcatgg tcagcttgaa acgggcgtac
     3061 tgcggagcgc cgttcaacat ggcaggctcg aacttccact gcatggcgta ggcttcggcc
     3121 gtgggccgga gctggggcgg accttccttg gccactgccg aggtgggaac gccatcgggg
     3181 ccgacgacga tctcgacgac cacggtgccc tggatctttg cgatcttggc gaggggcggg
     3241 tagggg
//
LOCUS       DATGWW010000474         2606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_82452, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000474 DATGWW010000000
VERSION     DATGWW010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82452"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1236
                     /locus_tag="VK150_06830"
     CDS             <1..1236
                     /locus_tag="VK150_06830"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP31058.1"
                     /translation="QPARLIGTHSDLTDRRTAEAALRDAHKAESLGLMAAGIAHDFNN
                     LFQSLLGNLELAHLRADLPGRQVIDRARNALDKASGLSRRLLDFSGGSFTRLETLSVN
                     ALIRGALEASSPRETALIHLELDAGIPEVVADSQQMRQVVEILLENALEALAASGAPE
                     GTVTLATAWLPELPDSERALGRWMGETAPGPMVRISVADTGGGAGPGVMERLFDPFFS
                     TKGLGRGLGLPSALGLIRGNRAALQVVDQPGAGMSFRVYLPADRRVSRRTHSDPEIQA
                     DRQAVLVVDDELELRLVLTEALRECHGCEVFEAADGIEAIEVFQAHLEEIGLVLMDSV
                     MPRMKGPEAFDEIRRIRPGVPGILISGFSEGKGQDLAQKHGFSAFLKKPFPLKHLIEV
                     MTEVKALGRTDDEPGGTYA"
     gene            complement(1344..>2606)
                     /locus_tag="VK150_06835"
     CDS             complement(1344..>2606)
                     /locus_tag="VK150_06835"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLP31059.1"
                     /translation="RGIGTENVRFAMRAMVAQKLRSFLTLLGIVAGVATVIAMVSFVS
                     GFNAAVTDSFSAFGTTLVQFQKYEQRFGGGGPLPEDQKRRRNLTIEDAEALKRSSPLA
                     AAVSQERYLFGPAGAALIIKTPEGTEANGPTFVGTNPDYAPANNSFVEDGRFMVEADI
                     AHASRTCVLGPETAKALFGGKDPIGRTVLVNGNAFGVVGLLEKKGSFLGGDADNIMLI
                     PISTFDEMFPQIKNGTGDTIHIATVPKDPKQMYEMMDQEVAILRARRGLRANQPNDFA
                     IFTSEAQLKTFQQITGGIAGAMILIAAIALLVGGVGVMNIMLVSVTERTREIGVRKAL
                     GATRRDIAMQFLVEAISLTGVGGAVGIATGLGIAMLVRLVFEFPAAAPLWSIVLGFGV
                     STAVGLIFGLWPALKAAKQDPIEALRYE"
BASE COUNT          395 a          848 c          946 g          417 t
ORIGIN      
        1 caacccgccc gcctcatcgg cacccattcc gacctcacgg accgccggac cgccgaagcg
       61 gctctgcggg acgcgcacaa ggctgagagc ctcggcctga tggccgcggg catcgctcac
      121 gacttcaaca atctgttcca atccctctta gggaacctgg agctggcgca cctccgggcg
      181 gacctccccg gtcggcaggt catcgaccgg gcgcggaacg cgctggacaa ggcctcgggg
      241 ctgtcgcggc ggctgctgga cttttccggg ggcagtttca cccgcctgga gaccctgtcc
      301 gtcaatgccc tgatccgggg ggcgctggag gccagctcgc cgagggagac cgccctcatc
      361 cacctggagc tggatgccgg gattccggag gtggtggcgg attcccagca gatgcgacag
      421 gtcgtggaga tcctcctcga gaatgccctg gaggcgctgg cagcgtcggg ggcgccggag
      481 ggcacggtga cgctggccac cgcgtggctg ccggagttgc cggattccga gcgggcgctg
      541 ggccggtgga tgggtgaaac cgcgcccggc cccatggtgc ggatctccgt cgccgacacg
      601 ggcgggggcg ccgggcccgg ggtgatggag cgcctgttcg atccgttctt cagcaccaaa
      661 gggcttggcc ggggcctggg cctcccttcg gctctgggcc tcatccgcgg caaccgggcg
      721 gcgctgcagg tggtggacca gcccggggcg gggatgagct tccgggtcta cctcccggct
      781 gaccgccggg tgtcgcggcg gacccattcc gacccggaaa tccaggcgga ccggcaggct
      841 gtcctggtgg tggacgacga gctggagctg cgcctggtgt tgaccgaggc gctccgcgaa
      901 tgccacggct gcgaggtgtt cgaagccgcc gacggcatcg aggccatcga ggtgttccag
      961 gcccatctgg aggagatcgg cctcgtgctg atggacagcg tcatgccgag gatgaagggt
     1021 cccgaggcct tcgacgagat ccgccgcatc cggccagggg tgcccggcat cctcatcagc
     1081 ggcttcagcg aggggaaggg gcaggacctc gcgcagaagc acggtttctc ggcctttctg
     1141 aaaaagccct tccccctcaa gcacctgatc gaggtcatga cggaagtgaa agccctcggt
     1201 cggaccgacg atgagcccgg cggaacctac gcctgaaggc cggtttcagt cgaggcctgc
     1261 tcagatcccg gcgccacgaa gccgggccga cccgcgtccg ctcgaagggg aacctgcgcc
     1321 gcgcctgggg cgaaggcgag cgtctattcg tagcggaggg cctcgatggg gtcctgcttg
     1381 gcggccttca gggcgggcca caatccgaag atgagtccca ccgccgtgct gacgccgaag
     1441 cccaggacga tgctccacag cggggccgcg gcggggaact cgaagaccag ccgcaccagc
     1501 atggcgatgc cgaggcccgt ggcgatgccc accgcgccgc ccacgcccgt gaggctgatg
     1561 gcctccacca ggaactgcat ggcgatgtcg cgacgggtgg cgcccagggc cttgcgcacg
     1621 ccgatctccc gggtgcgctc ggtgacgctc accagcatga tgttcatgac gcccacgccg
     1681 cccaccagca gcgcgatggc ggcgatgagg atcatggcgc ccgcgatgcc gccggtgatc
     1741 tgctggaagg tcttgagctg ggcctcgctg gtgaagattg cgaagtcgtt cggctggttg
     1801 gcccgcaggc cgcgccgggc gcggaggatg gccacttcct ggtccatcat ctcgtacatc
     1861 tgcttcgggt ccttgggcac ggtggcgatg tggatggtgt ccccggtgcc gttcttgatc
     1921 tgggggaaca tctcgtcgaa ggtgctgatg gggatgagca tgatgttgtc ggcatccccg
     1981 ccgaggaagc tgcccttctt ctccagcagc cccaccacgc cgaaggcgtt gccgttcacc
     2041 agcaccgtgc ggccgatggg gtccttcccg ccgaagaggg ccttggcggt ctcggggccg
     2101 agcacacagg tgcgggaagc gtgggcgatg tcggcttcca ccatgaagcg cccgtcctcg
     2161 acgaagctgt tgttggcggg ggcgtagtcg ggattggtgc ccacgaaggt cgggccgttg
     2221 gcctcggtgc cctcgggggt cttgatgatg agggcggcgc ccgcgggccc gaagaggtag
     2281 cgctcctgag agacggcggc cgccaggggc gagctgcgct tcagggcttc ggcatcctcg
     2341 atggtgaggt tgcgccggcg cttctggtcc tcgggcaggg ggccgccccc gccgaagcgt
     2401 tgctcgtatt tctggaactg gaccagcgtg gtgccgaagg cgctgaagct gtcggtgacg
     2461 gcggcattga aacccgagac gaagctcacc atggcgatga ccgtggccac accggccacg
     2521 atgcccagca gggtgaggaa gctgcgcagc ttctgggcca ccatggcccg catggcgaac
     2581 cggacattct cggtgccgat gcccct
//
LOCUS       DATGWW010000475         2352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_444994, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000475 DATGWW010000000
VERSION     DATGWW010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444994"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VK150_06840"
     CDS             <1..651
                     /locus_tag="VK150_06840"
                     /inference="COORDINATES: protein motif:HMM:NF015436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HLP31060.1"
                     /translation="VVCFDLHNSAEANLALARSTPHTRIPLVEGDLDRVVGVIHLKEL
                     LWALQDRPGDLDLRALARPAFFVPEMKPIQGLLLEFQQRKQHLALVVNEHGGVDGLVT
                     LEDVLEELVGEIQDEFDREAIQLRRTRGGGWLAQGDVMLEQLVDHLKLDLQAEAGSVS
                     LGGFFQEQLGRVLRPGDELRLQGWRIRVLSMRGLAPGQFLLKPLPPEAPDGTTAHA"
     gene            644..1477
                     /locus_tag="VK150_06845"
     CDS             644..1477
                     /locus_tag="VK150_06845"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HLP31061.1"
                     /translation="MPEPLDGFLLAAGLGTRMGALSRCLPKPAWTLRGRPLLQWGAEA
                     LRRGGATRLGCNAHFQVEALRAVAQDIDVCEEPMLLGSAGGLRHALGRVASELLTWNA
                     DVWADAVPFDRLRDGHRQGRATLTWLLVPHPGGPWNPVWMDDDDRVLPKGVTGPKGPY
                     HFTGAAAWSPEALALLPEGPSEVNDLRPRVPFHRGLVVAPFPWREVGTPDALIQAAAE
                     LAPDQEGRLPGCYLHSGAHLPGSRFTRCVFGPGAAPPVAVADADALWFEAGGNQVRLG
                     I"
     gene            complement(1486..>2352)
                     /locus_tag="VK150_06850"
     CDS             complement(1486..>2352)
                     /locus_tag="VK150_06850"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HLP31062.1"
                     /translation="ILEKAGGRPFSELLRERIWKPLGMTRTGFEDVTLAGNVRTAEVM
                     PGRASVYQWRGDRQRLHWYAYPPHTYAAGGAFTSLRDEAAFLLALDQGRLLSARGREA
                     LWTPFRLNDGRLAGFGVAWSVGTLAGRPCAGHSGGPALSDVLYFPKERLGVIVFTNQQ
                     RLIPSLARALAAQLLALGADPAKDAAVDSNPALTQRHRALIEALGRGQADPSAFSGEA
                     AATLPEGAPWLELQLRPYGPLSRLTFLAERAEKGGRVRTYRAIHASGVVVAWTFSLDA
                     EGRVVDFDPKEE"
BASE COUNT          297 a          871 c          867 g          317 t
ORIGIN      
        1 gtggtctgct tcgacctgca caactccgcg gaggccaacc tcgccctggc ccgctccacg
       61 ccccacaccc gcattccgct ggtggagggc gacctggacc gcgtggtggg cgtcatccac
      121 ctgaaggagc tgctctgggc cctgcaggac cggcctggcg acctcgacct gcgtgccctg
      181 gcccggcccg ccttcttcgt cccggagatg aagcccatcc agggcctgct gctggaattc
      241 cagcagcgca agcagcacct cgccctggtg gtgaacgagc acggcggcgt ggacggcctg
      301 gtcaccctgg aagacgtgct ggaagagctg gtgggcgaga tccaggacga gttcgaccgc
      361 gaggccatcc agctgcggcg cacccgcggc ggcggctggc tggcccaggg cgacgtgatg
      421 ctcgaacagc tggtggatca cctgaagctg gacctgcagg ccgaagccgg ctccgtgagc
      481 ctgggcggct tcttccagga acagctgggc cgcgttctgc gccccggcga cgagctgcgg
      541 ctgcagggct ggcgcatccg cgtgctgtcc atgcgcggcc tggcgccggg ccagttcctg
      601 ctgaagcccc tgccgccgga ggcgcccgac ggaaccacgg cccatgcctg aacccctcga
      661 cggcttcctg ctcgccgcgg gcctgggcac gcgcatgggc gccctgagcc ggtgcctgcc
      721 caagcccgca tggaccctgc ggggccggcc gctgctccag tggggtgccg aagccctgcg
      781 ccgcggcggc gccacgcgcc tgggttgcaa cgcccatttc caggtcgagg cgctgcgcgc
      841 cgtggcccag gacatcgacg tctgcgagga gccgatgctc ctgggcagcg ccgggggcct
      901 gcgtcacgcc ctgggccgcg tggcctcgga gctgctcacc tggaacgccg atgtctgggc
      961 cgacgcggtg cccttcgatc ggctgcgcga cgggcaccgg cagggccggg ccaccctcac
     1021 ctggctgctg gttccgcacc ccggcggtcc ctggaacccg gtgtggatgg acgacgacga
     1081 ccgcgtgctg cccaagggcg tgacggggcc gaaggggccc taccacttca ccggcgccgc
     1141 cgcctggtcg ccggaggccc tggcgctgct gcccgagggc cccagcgagg tgaacgacct
     1201 gcggccccgg gtgcccttcc accggggcct cgtggtggcg cccttcccct ggcgcgaggt
     1261 gggcacgccc gacgccctca tccaggccgc cgccgagctg gcgccggacc aggagggccg
     1321 cctgccgggc tgctacctcc actccggcgc gcaccttccg ggcagccgct tcacccgctg
     1381 cgtgttcggg cccggcgccg cgccgcccgt cgccgtggct gacgccgacg ccctgtggtt
     1441 cgaggccggg ggcaaccagg tgcgcctcgg gatctgaggc ggcgcctact cctccttcgg
     1501 gtcgaagtcg acgacgcggc cctcggcatc caggctgaac gtccaggcca ccacgacccc
     1561 ggatgcatgg atggcccggt aggtgcgcac gcggcctccc ttctctgcgc gttcggccag
     1621 gaaggtcagg cggctgaggg ggccgtacgg ccgcagctgc agctccagcc agggcgcccc
     1681 ctccggcagg gtcgcggccg cctcgccgct gaaggcggac gggtcggcct gaccccggcc
     1741 cagggcctcg atgagagccc ggtggcgctg ggtcagcgca gggttggaat ccacggcggc
     1801 atccttggcg ggatccgctc ccagggccag caactgcgcg gccagggccc gggccaggct
     1861 ggggatgagg cgctgctggt tggtgaagac gatgaccccc aggcgctcct tcgggaagta
     1921 cagcacatcg gagagcgccg ggccgccgct gtgacccgcg caggggcggc ccgccagggt
     1981 gcccacgctc caggcgacgc cgaagccggc gagtcgcccg tcgttgaggc ggaagggcgt
     2041 ccagagcgcc tcgcggcccc tggcgctgag caggcgcccc tggtccagcg ccagcaggaa
     2101 ggcggcctcg tcccgcaggc tcgtgaaggc tccgcccgcg gcgtaggtgt ggggcgggta
     2161 ggcgtaccag tgcaggcgct ggcgatcgcc gcgccactgg tagacgctgg cccggccggg
     2221 catcacctcg gcggtgcgga cgttgcccgc cagggtcaca tcctcgaagc ccgtgcgggt
     2281 catgcccagg ggcttccaga tgcgctcgcg cagcagctcg gagaaggggc gtccaccggc
     2341 cttctcgagg at
//
LOCUS       DATGWW010000476         3585 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_260362, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000476 DATGWW010000000
VERSION     DATGWW010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3585
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260362"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(118..1650)
                     /locus_tag="VK150_06855"
     CDS             complement(118..1650)
                     /locus_tag="VK150_06855"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: protein motif:HMM:NF002956.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HLP31063.1"
                     /translation="MSEPIEQAQPTLKAPLLFISVLLIASCGLIYELVAGTLSSYLLG
                     DSVTQFSTVIGVYLSAMGLGSWLSKFLQRGLARRFVDLELAVALVGGFSAPILFQAFA
                     HTHAFRVVLYGTVVAVGTLVGLEIPILMRILKDQVRFKDLVASVLTLDYIGALFASLL
                     FPLLLMPKLGLVRTSLLFGLLNAAVGLWSTYLLQSQLGPTRMIRLRCAVVMALLAVGL
                     AFAGKFTLAMEEEIFADEIVYAKDSAYQRIVLTRGRGSFQLFLNGNLQFSSADEYRYH
                     EALVHPAFGVRPDAQRVLICGGGDGLAVREVLKHPSVREVVLVDLDPGMTDMARNQPM
                     VRQLNGGALDDPRVKVVNADAMVWLQETPGAPFDLAIVDFPDPNTYALGKLYTSRFYR
                     LLQRRLAEDAIIAVQSTSPLMARQSFWCIAATMEASGLKVRPYHLAVPSFGVWGFVLA
                     SKRDFAVPIQVLPGLRHLSDEATAAMFAFPKDMDRVPVEVNRLDNQVLVHLYTREWRR
                     WS"
     gene            complement(1810..2028)
                     /locus_tag="VK150_06860"
     CDS             complement(1810..2028)
                     /locus_tag="VK150_06860"
                     /inference="COORDINATES: protein motif:HMM:NF015927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HLP31064.1"
                     /translation="MFTNQLLHQLLVAAVFSVLGLVILGVVWLVLVKVLPFSLRKEME
                     DDQNVALGIVLGCLILGISLIIAASIHG"
     gene            complement(2028..2207)
                     /locus_tag="VK150_06865"
     CDS             complement(2028..2207)
                     /locus_tag="VK150_06865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31065.1"
                     /translation="MRILYMLFLGGGFSLMVANGFFGREFFGQRRRADLPPSVRQTPG
                     AYRTFLHNNGFHGGK"
     gene            complement(2207..>3585)
                     /locus_tag="VK150_06870"
     CDS             complement(2207..>3585)
                     /locus_tag="VK150_06870"
                     /inference="COORDINATES: protein motif:HMM:NF025158.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4178 domain-containing protein"
                     /protein_id="HLP31066.1"
                     /translation="KCGGPLALRAPDETLRVGCPSCGSLLSAEGGKLAFLKSLKQPRQ
                     DVVIPLGAEGSLEGVPVTCIGQLRRSCTVDGTVYPWNEYLLLDGQHGFRWLVQSEGHW
                     SVAVAVAPGDVPQARDGQRSLFALGATWRRFQDVAATVEGVWGEFYWQVEQGEQVQVT
                     EFVAPPRSLTRERQAHKGGGGEVNWSLSTYLRPEQVQAAFKLQPLPEPTGVASFQPNP
                     HKATLASAWLWLVGALGLLLILVMAESVTHRNVELFHRKLDLYELAPNLRQVEAEAIR
                     RGIPVRRPSPTPGPAPAAEAQEPVFFSDPIEIREGRQNLAVTLSAPVNNSWVGVEGAL
                     VSETTGVAELFLLESSFYHGVDGGESWSEGDHTQTVFLSAVPAGTYVLRLAPQWDGPL
                     PPVRVIDVQLRQGVMRWLYPGLALLAILVVPLILVFRLAAFESRRWQESMYGPSAGTG
                     GRDSGGDD"
BASE COUNT          645 a         1157 c         1264 g          519 t
ORIGIN      
        1 gcggcggttc tgctgcggac gggagatcat ccgcagatgt cgcagatggc cgcagataaa
       61 gaagaagcct ttgtcgtttc gtctgcacca tctgcgtcat ctgcgacttc ccggtttcta
      121 cgaccaccgc cgccactcgc gggtgtagag gtggacgagc acctggttgt ccaggcggtt
      181 cacctccacg ggcacccggt ccatgtcctt ggggaaggcg aacatggccg cggtggcttc
      241 gtcggacagg tggcgcaggc ccggcagcac ctggatgggc acggcgaagt cgcgcttcga
      301 ggccagcacg aagccccaca cgccgaagga gggcacggcc aggtggtagg ggcgcacctt
      361 caagcccgag gcctccatgg tggcggcgat gcaccagaag gactgccgtg ccatgagcgg
      421 cgaggtgctc tgcacggcga tgatcgcgtc ctccgcgagc cggcgctgga gcagccggta
      481 gaagcgcgac gtgtagagct tgccgagggc ataggtgttg gggtcgggaa aatccacgat
      541 ggccaggtcg aagggcgcgc cgggtgtctc ctgcagccag accatggcgt cggcgttcac
      601 caccttcacc cgcggatcat ccagggcgcc accgttgagc tggcgcacca tgggctggtt
      661 ccgcgccatg tcggtcatgc cggggtcgag gtccacaagc accacttcac gcaccgaggg
      721 atgcttgagc acctcccgca cggccaggcc atcgccgccg ccgcagatga gtacgcgctg
      781 cgcgtccggc cggacgccga aggccggatg cacgagcgcc tcgtggtagc ggtactcgtc
      841 ggcgctggag aactgcaggt tgccgttcag gaagagctgg aagctgcccc gcccccgggt
      901 gagcacgatg cgctggtagg cgctgtcctt ggcgtagaca atctcgtcgg caaatatctc
      961 ctcttccatg gcgagggtga acttcccggc gaaggccagg cccacggcca gcagggccat
     1021 caccacggcg cagcgcagcc ggatcatccg cgtgggaccc aactgggact gcagcaggta
     1081 agtggaccag agacccacgg cggcgttcag gaggccgaac agcaggctgg tgcgcaccag
     1141 gcccagcttc ggcatgagca gcagggggaa gagcagcgag gcgaagaggg cgccgatgta
     1201 gtcgagggtg aggacgctgg ccaccaggtc cttgaagcgc acctggtcct tgaggatccg
     1261 catgaggatg gggatctcca ggcccaccag cgtgcccacg gccaccacgg ttccgtagag
     1321 caccacgcgg aaggcgtggg tgtgggcgaa ggcctggaag aggatgggcg ccgagaagcc
     1381 gcccaccagg gccacggcca gctccagatc cacaaagcgc cgggccaggc cccgctggag
     1441 gaacttcgac agccaggaac ccaggcccat ggcgctcaag tacacgccga tcaccgtgga
     1501 gaactgcgtg acggaatccc ccagcaggta gctcgagagc gtccccgcca ccagctcgta
     1561 gatcagcccg cagctggcga tgagcagcac gctgatgaac aggagcggcg ctttgagtgt
     1621 gggctgggct tgttcgatgg gctcagacat gttgaggtgc aaggatcaaa ggattcaccg
     1681 ccaagacagt aaagaccgga agaaaaaact caccgccaag acaccaagac gccaagaaaa
     1741 gctgaaacga ggtcgtttcg gtctttcctt ggcgccttgg catcttggcg gtaatccatt
     1801 ccttcttcat cacccatgga tcgaggcggc gatgatgagg ctgatgccga ggatgaggca
     1861 gcccagaaca atgccgaggg ccacgttctg gtcgtcctcc atctccttgc gcagcgagaa
     1921 gggcagcacc ttcacgagca cgagccacac cacgccgagg atgacgaggc ccaggaccga
     1981 gaagacggca gcgacgagga gctggtggag cagctggttc gtgaacatca cttacctccg
     2041 tggaagccgt tgttgtgaag gaaggtccgg taggcgcccg gagtctggcg gacgctgggg
     2101 ggcaggtcgg cccggcggcg ctggccgaag aactcccggc cgaagaagcc gttggccacc
     2161 atgaggctga agccgccgcc gaggaagagc atgtagagga ttcgcatcag tcgtcacctc
     2221 cgctgtcccg gccaccggtg cccgcgctgg ggccgtacat gctctcctgc caccggcggc
     2281 tctcgaaggc cgccaggcgg aagacgagga tcaggggcac cacgaggatg gccagcagcg
     2341 cgaggccggg gtacagccac cgcatcaccc cctggcgcaa ctgcacgtcg atgacccgca
     2401 ccggcggcag gggaccgtcc cactggggcg ccaggcgcaa cacataggtg ccggcgggga
     2461 cggcgctgag gaacacggtc tgggtgtggt cgccctccga ccaggactcg ccgccatcca
     2521 cgccgtggta gaagctgctc tccagcagga agagctcggc cacgccggtg gtttcgctca
     2581 ccagggcccc ttccacgccg acccagctgt tgttgaccgg ggcgctgagg gtgacggcca
     2641 ggttctgtcg gccttcccgg atctcgatgg ggtctgagaa gaagacaggt tcctgcgcct
     2701 cggccgccgg cgccggtccg ggggtcggcg agggccggcg cacggggatg ccgcgccgga
     2761 tcgcctcggc ttccacctgg cggaggttcg gcgccagctc gtagaggtcc agcttccggt
     2821 ggaacagctc cacgttccgg tgcgtcacgg attcggccat gacgaggatc agcagcaggc
     2881 ccagcgcgcc cacgagccag agccaggcgg aagccaacgt agccttgtgg ggattgggct
     2941 ggaaggaggc gacgcccgtc ggctcgggaa gcggctggag cttgaaggcg gcctgcacct
     3001 gctcgggccg gaggtaggtg gacaggctcc agtttacttc gccgccgccg cccttgtggg
     3061 cctggcgctc gcgggtgagg ctgcggggcg gggcgacgaa ctcggtgacc tgcacctgtt
     3121 cgccctgttc gacctgccag tagaattcgc cccacacgcc ttccacggtg gcggccacgt
     3181 cctggaagcg ccgccaggtg gcgcccaggg cgaagaggct gcgctgcccg tcgcgggcct
     3241 ggggaacgtc tccgggcgcc acggccaccg cgacgctcca gtggccttcg ctctgcacga
     3301 gccagcggaa gccgtgctgg ccgtccagca gcaggtactc gttccagggg tacaccgtgc
     3361 cgtccaccgt gcaggaccgc cgcagctggc cgatgcacgt gacgggaacg ccctccaggc
     3421 tgccctccgc gcccagcggg atcaccacgt cctggcgggg ctgcttcagg ctcttgagga
     3481 aggccagctt tccgccctcg gccgagagga ggctgccgca gctggggcag cccacgcgga
     3541 gggtctcgtc gggcgcccgc agggcgagcg gaccgccgca cttgg
//
LOCUS       DATGWW010000477         6023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_445038, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000477 DATGWW010000000
VERSION     DATGWW010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6023
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_445038"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1355
                     /locus_tag="VK150_06875"
     CDS             <1..1355
                     /locus_tag="VK150_06875"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="histidine kinase dimerization/phosphoacceptor
                     domain -containing protein"
                     /protein_id="HLP31067.1"
                     /translation="PLRRGWPGFRPAEFLLQGLGVALAMLVVARFSEPGTLHLKYLLF
                     VPIFWMVVRGGTRVASLGFLVLNLAMALAVLQRQVTADAVLGAQAFLLVLFSVSLYLA
                     AAVDAHAAILAGHERSSRRLNQLLEGTGAIPWEMDLVSGRCGYLGPGAVSLLGLAPDA
                     WHKQPYWGEVLHPDDQLSFLKFLKDVGRPDQDHQLEFRLRAPEGREHWVRAVGGVEPG
                     TPDRAMGFLFDIHAHKRAEENALRASLKEKDLLLREIHHRVKNNLQVVSSLLRLQAAG
                     QVDPALQRALHEAQERIQAIALIHQKLKHAPDYSQLDLPGYVRTLAERLVRSYASVPA
                     LIDLQVRVAEVDIGPDAPVPLGLILNELVANALQHAFPPGTGGSLDIEIAPDGDGWIL
                     VRVADSGVGLPESVELAHGGLGFQLVQALTDQLGGALELERRRGASFLLRFPPSRRQP
                     "
     gene            1352..3274
                     /locus_tag="VK150_06880"
     CDS             1352..3274
                     /locus_tag="VK150_06880"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP31068.1"
                     /translation="MSQPQILIVEDEAIVAMDLKLHLQELGYGVAGLAASGSEAIGLA
                     LRLRPDLVLMDISLGAGMDGIEAARQVQAAGMPVVFLTAFADEATLARAKESGPYGYL
                     LKPFDERSLHSTVEMALYRHRMERELKASESRMRAIFEHALDLVVILDQSGRMSYTSP
                     SVTRLLGYGAEDYLGTPAIELVHPQDRARYAEVLEQLQNVPDASCTMELRILHKDGTP
                     RLMEAISHNAVGVPGVHGIVINARDITERKQAELDRQSMEAKVQQAQKLESLGVLAGG
                     IAHDFNNLLMGIMGHAGLALMELGLEPPLRRRLQQIEMAATRAADLTNQLLAYSGRGK
                     FHVEPLSLSRLVDEMESLLETVISKKAQLEHHYAPDLPPIEADATQIRQVVMNLITNA
                     SDALGDRAGRISVSTGTMESGPLTPCLAGTPPEGRAVFLEVADTGSGMDESTLERIFD
                     PFFSTKFTGRGLGLAAVLGIMRGHHGAVQVDTQPGHGTTFRLLFPPSDKAASTGDWQS
                     PPALAYQSQGTILVVDDEESVRSVAIATLERCGFTVQTATNGRDGLRAYRENAAAIRA
                     IVLDLTMPIMGGDEVLAALRSGADGASQVPVLLSSGYSSAEVAGNLQRHGPLHFLQKP
                     YSPGDLIQRIRACLGE"
     gene            complement(3275..4291)
                     /gene="lpxD"
                     /locus_tag="VK150_06885"
     CDS             complement(3275..4291)
                     /gene="lpxD"
                     /locus_tag="VK150_06885"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: protein motif:HMM:NF002060.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HLP31069.1"
                     /translation="MSRTVTTLSAQDLAERLGGTLEHCPPDRPISEVKPLEEARSGSV
                     SFLANPKYAAKARESAAGLIFADAAVDLGDRPVLRVKHPYWAFAQAIGWLHPEPTPEW
                     GAAPVHPTAVIGEGCRVAPGVTVGARTVLGQDCVLHPGVHVGDDCVLGDGCELFPGAV
                     LYRRTKLGDRVTIHANSVVGSDGYGYVLVEGRHAKIPQVGWVELGDDVEIGACVCIDR
                     GVLGPTRIGTGTKIDNQVQVGHNVQVGSHCLLVSQTGISGSTKLGDYVTLAGKVGVVG
                     HIEIGSRTVVGGNSVVAKSLPEGSFVAGFPARPYKEWAEAQAALNRLPRFMRQARQAG
                     ARQG"
     gene            4366..5160
                     /locus_tag="VK150_06890"
     CDS             4366..5160
                     /locus_tag="VK150_06890"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HLP31070.1"
                     /translation="MHPVLLEIGSFPLGTYGLLLAIAFFAGTGLARRQAKLDGLAPAA
                     ITDLAIAMLISAILGSKLLMVVVDLINGAPLREVFSLGTLRAGGAIHGGIIAATAVFF
                     WKLRKGQGLPLRITGDALVPGVALGQAIGRLGCFSAGCCYGTESHAAWATTFTNPIAH
                     AFSGTPLGVPLHPVQLYNTLANLGVMAVLLLARPKRTFQGQIFALYFLVEGLGRIITE
                     TWRGDVDRGTGWLNWAWLSTGRLTGLAFMLLGLGLWMFWQRRKETR"
     gene            5157..>6023
                     /locus_tag="VK150_06895"
     CDS             5157..>6023
                     /locus_tag="VK150_06895"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HLP31071.1"
                     /translation="MISLCAEEGAPRLDRFLADRFPEIPRAKWDVHVRTGDVKVNGQA
                     VTKGGVKLRPGDLIETELPALAPPAAHLEAEDLPLPSLFEDAHLWIVDKPSGMVVHPG
                     PGHAGGTVVNALLHRLKTPVVVEADGEDLEDAEELATGWPGLVHRLDRYTTGCLCLAK
                     TAEAQRAIQAQFKARTVEKRYLALVRHSPRLPQLGSLLVDEPIARHKQDRLRMVVAAG
                     GRPAQTRIRVLARTTSIALVECELLTGRTHQIRVHLAHLRAPLMGDPLYGGPGRWKDV
                     DGGALLLPHPLLH"
BASE COUNT          873 a         2287 c         1961 g          902 t
ORIGIN      
        1 cccccctccg ccgaggctgg ccggggttcc ggcccgcgga gttcctgctc cagggcctgg
       61 gcgtggccct ggccatgctg gtcgtggctc ggttcagcga gcccggcacg ctgcacctga
      121 agtacctgct cttcgtgccc attttctgga tggtggtgcg gggcggcacc cgggtggcca
      181 gcctgggctt cctggtgctg aacctggcca tggccctggc cgtgctgcag cggcaggtca
      241 ccgccgacgc cgtgctcggc gcccaggcct tcctcctcgt gctgttcagc gtctccctct
      301 acctcgccgc cgcggtggac gcccacgcgg ccatcctggc gggccatgag cggagttccc
      361 gccgcctgaa ccagctgctg gagggcaccg gcgccatccc ctgggaaatg gacctggtct
      421 ccgggcgttg cggctacctg ggcccgggcg ccgtgtccct gctgggattg gcccctgatg
      481 cctggcacaa gcagccctat tggggcgagg tcctccaccc ggacgatcag ctttccttcc
      541 tgaaattcct gaaggatgtg ggccggccgg accaggacca ccagctggag ttccgcctcc
      601 gggccccgga aggccgggag cactgggtcc gggcggtggg gggggtcgaa ccgggcacgc
      661 cggaccgggc catgggcttc ctcttcgaca tccacgccca caagcgggcc gaggagaacg
      721 ccctccgggc ctcgctgaag gagaaggacc tgctcctgcg ggaaatccac caccgcgtga
      781 agaacaacct gcaggtggtc tccagcctgc tgcgcctcca ggccgctggg caggtggacc
      841 cggcgctcca gcgggccctg cacgaggccc aggagcggat ccaggccatc gccctcatcc
      901 accagaagct caagcacgcc cccgactact cgcagctgga cctgcctggc tacgtgcgga
      961 ccctggccga acgcctggtc cgcagctacg ccagcgtgcc cgccctcatc gacctgcagg
     1021 tgcgcgtggc tgaggtggac atcgggccgg acgctcccgt gcccctcggc ctcatcctca
     1081 acgagctggt ggccaatgcc ctccagcacg ccttcccccc gggcacgggc ggcagcctcg
     1141 acatcgagat cgcgccggat ggcgatggct ggatcctcgt ccgggtggcg gattcggggg
     1201 tcggcctgcc cgagtctgtg gaactggccc atggcggcct gggattccag ttggtacagg
     1261 cattgaccga tcagctgggg ggcgccctgg aactggaacg gcgacggggc gcctccttcc
     1321 tcctccgctt cccaccctcc cgccggcagc catgagccaa ccgcagatcc tgatcgtcga
     1381 ggacgaggcc atcgtggcca tggatctcaa gctgcacctc caggaactgg ggtacggcgt
     1441 ggccggtctc gccgccagcg gttccgaggc catcgggctc gccctgcgcc tgcggcccga
     1501 cctcgtgctc atggacattt cgctcggcgc gggcatggat ggcatcgagg ccgcacgcca
     1561 ggtccaggcg gccggcatgc cggtggtctt cctcacggcc ttcgccgacg aggccaccct
     1621 cgcccgggcc aaggagagcg gcccctacgg ctacctcctg aagcccttcg acgagcggtc
     1681 gctgcactcc acggtggaga tggccctcta ccggcaccgc atggagcggg agctcaaggc
     1741 cagcgaatcc cggatgcgcg ccatcttcga acacgcgctg gacctggtcg tgatcctcga
     1801 ccagtccggc cggatgtcct acaccagccc ctcggtcacg cggctcctcg gctacggcgc
     1861 cgaggactac ctcggcaccc cggccatcga gctggtgcat ccccaggacc gcgcgcgcta
     1921 cgccgaggtg ctggaacagc tccagaacgt gccggacgcc tcctgcacca tggagcttcg
     1981 gatcctgcac aaggacggca cgccccgact catggaggcc atctcccaca acgccgtggg
     2041 cgtgcctggg gtgcacggga tcgtgatcaa cgcgcgggac atcaccgagc gcaagcaggc
     2101 cgaactcgat cgccagagca tggaagccaa ggtgcagcag gcccagaagc tggagagcct
     2161 cggcgtgctg gccgggggca tcgcccacga cttcaacaac ttgctcatgg gcatcatggg
     2221 ccatgcgggc ctggccctca tggagctcgg gctggagccc ccgctgcgcc gccgcctcca
     2281 gcagatcgag atggccgcca cccgcgcggc ggatctcacc aaccagctgc tggcctactc
     2341 cggccggggc aagttccatg tggagcccct ctccctctcc cgcctggtgg acgagatgga
     2401 gagcctcctg gagaccgtca tctccaagaa ggcccagctc gagcatcact acgcgccgga
     2461 cctgcctccc atcgaggcgg acgccaccca gatccgccag gtggtcatga acctgatcac
     2521 caacgcgtca gacgccctgg gcgaccgcgc ggggaggatc tcagtctcga ccgggaccat
     2581 ggagagcggc cccctcaccc cctgcctcgc cggcacgccg cccgaaggaa gggccgtctt
     2641 cctggaagtg gcagacaccg gctccggcat ggacgagagc accctcgagc gcatcttcga
     2701 tcccttcttc tccaccaagt tcaccggccg ggggctgggc ctggcggcgg tgctcggcat
     2761 catgcgcggc catcacgggg ccgtccaggt ggacacccag cccggccacg gcacgacctt
     2821 ccgcctgctc ttcccgcctt cagacaaggc cgccagcacc ggagactggc agagcccgcc
     2881 cgccctggcc tatcagagcc agggcacgat cctggtcgtg gacgacgagg aatccgtgcg
     2941 cagcgtcgcc atcgccaccc tggagcgctg cggcttcacg gtgcagactg ccaccaatgg
     3001 ccgcgatggc ctgcgggcct accgggagaa cgccgcggcc atccgggcca ttgtgctcga
     3061 cctcaccatg ccgatcatgg gcggcgacga ggtgctcgcg gcgctgcgca gcggcgccga
     3121 cggcgcgtcc caggtgcccg tgctcctctc cagcggctac agcagcgccg aggtggccgg
     3181 caacctccag cgccacgggc ccctgcactt cctgcagaag ccgtacagtc ccggcgacct
     3241 catccagcgc atccgggcct gcctgggcga atgatcaacc ctgccgcgca ccagcctgcc
     3301 gggcctggcg catgaagcgc ggcaggcggt tgagcgcggc ctgggcctcg gcccactcct
     3361 tgtagggccg ggcggggaag cccgcgacga agctgccctc gggcaggctc ttggccacca
     3421 cgctgttgcc gcccacgacg gtgcggctgc cgatctcgat gtggcccacc acgcccacct
     3481 tgcccgccag ggtcacgtag tcgccgagct tggtggagcc gctgatgccc gtctgactca
     3541 ccaacaggca gtggctcccc acctgcacgt tgtggcccac ctgcacctgg ttgtcgatct
     3601 tggtgccggt gccgatgcgg gtgggtccca gcacgccgcg gtcgatgcag acgcaggcgc
     3661 cgatctccac gtcgtcaccc agctccaccc agcccacctg ggggatcttc gcgtggcggc
     3721 cctccaccag cacatagccg tagccgtcgc tgcccaccac ggagttggcg tggatggtca
     3781 cccggtcgcc gagcttcgta cgccggtaga gcaccgcgcc gggaaagagc tcgcagccat
     3841 cacccagcac gcaatcgtca cccacgtgca cgccggggtg gaggacgcag tcctgtccca
     3901 gcaccgtccg ggcccccacc gtgacgccgg gcgccacgcg gcagccttcg ccgatcacgg
     3961 ccgtgggatg caccggcgcg gcgccccact ccggcgtggg ttcgggatgc agccacccga
     4021 tggcctgggc gaaggcccag tagggatgct tcacccgcag cacgggccgg tcgcccaggt
     4081 ccaccgcggc atccgcgaag atcaggcccg cggcgctctc cctggccttg gcggcgtact
     4141 tggggttggc caggaaggac acggagccgc tcctcgcctc ctccagcggc ttcacttcgg
     4201 aaatggggcg atccggggga caatgctcca gggtgccgcc cagacgttcg gccagatcct
     4261 gcgcgctcag ggtcgtcacg gtccgggaca tgggaatctc ctcttctccc tcccagtctt
     4321 cagccaaccg cctcctcttt ccagtcatcc gttcggaatc ccgccatgca cccagtcctg
     4381 ctcgagatcg gctccttccc cctgggcacc tacgggctgc tcctggccat cgccttcttc
     4441 gccggcacgg gcctcgcccg gcgccaggcg aagctggacg gcctggcccc cgcggccatc
     4501 accgacctgg ccatcgccat gctcatctcg gccatcctcg ggtcgaagct cctgatggtc
     4561 gtggtggacc tgatcaacgg cgcccccctc cgcgaggtgt tctccctcgg taccctccgg
     4621 gccggcggcg ccatccacgg cggcatcatc gccgccacgg ctgtcttctt ctggaagctc
     4681 cgcaagggcc agggtctgcc cctgcggatc accggcgacg ccctggtgcc cggcgtggcc
     4741 ctgggccagg ccatcggccg cctgggctgc ttttccgccg gctgctgcta cggcaccgag
     4801 agccacgcgg cctgggccac caccttcacc aaccccatcg cccacgcctt cagcggcacg
     4861 cccctcggcg tccccctcca ccccgtgcag ctctacaaca ccctcgccaa cctcggcgtc
     4921 atggccgtcc tgctgctggc ccgtcccaag cggaccttcc agggtcagat cttcgccctg
     4981 tacttcctgg tggaaggcct tggccggatc atcacagaga cttggcgtgg cgatgtggac
     5041 cggggcacag gctggctcaa ctgggcctgg ctcagcaccg gccggctcac gggcctcgcc
     5101 ttcatgttgc tgggcctggg cctctggatg ttctggcaac gccggaagga gacgcgatga
     5161 tcagtctgtg cgccgaagaa ggcgccccgc gcctggaccg cttcctggcg gaccgctttc
     5221 ccgagatccc ccgcgcgaag tgggatgtgc acgtccgcac cggtgacgtg aaggtgaacg
     5281 gccaggccgt gaccaagggc ggcgtgaagc tgcgcccggg cgacctgatc gagaccgagc
     5341 tgccggcgct cgcgcccccg gccgcccacc tggaggccga ggacctgccc ctgccctcgc
     5401 tcttcgagga cgcccacctg tggatcgtgg acaagcccag cggcatggtg gtgcaccccg
     5461 ggcccggcca cgcggggggg accgtggtga acgccctcct gcaccgcctc aagacccccg
     5521 tggtggtgga agccgacggc gaggatctgg aggacgcgga ggagctggcc acgggctggc
     5581 cgggcctcgt gcaccggctg gaccgctaca ccaccggctg cctctgcctc gccaagaccg
     5641 cggaggccca gcgggccatc caggcccagt tcaaggcccg caccgtggaa aagcgctacc
     5701 tggccctggt gcgccactcg ccccggctgc cgcagctggg cagcctgctg gtggacgagc
     5761 ccatcgcgcg ccacaagcag gaccgcctgc gcatggtggt ggccgccggc gggcgccccg
     5821 cgcagacccg catccgcgtg ctggcccgca ccacgagcat cgccctggtg gagtgcgagc
     5881 tgctgacggg ccgcacccac cagatccgcg tgcacctggc ccacctccgg gccccgctca
     5941 tgggtgatcc cctctacggc ggccccggcc gctggaagga tgtggacggc ggcgccctgc
     6001 tgctgcccca ccccctcctc cac
//
LOCUS       DATGWW010000478         1823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_380676, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000478 DATGWW010000000
VERSION     DATGWW010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380676"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            221..907
                     /locus_tag="VK150_06900"
     CDS             221..907
                     /locus_tag="VK150_06900"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HLP31072.1"
                     /translation="MLHTLAFDADDTLWHNETHYAETQEAFRALLRPFHDDAWIDARL
                     HDTEMRNLGRYGYGIKGFTLSMIETALQLTEHRLDGAGVQQVLDLGKAMLDKPVEPLP
                     GVADVLQALAGEYRLMLITKGDLFDQETKLARSGLGVHFAAVEIVSEKDEATYAAILQ
                     RHGIPAAAFAMVGNSVKSDILPVLALGARAVHIPYHLTWAHEVVEAPADSPFPVLGSI
                     RDLPALLASW"
     gene            957..1814
                     /locus_tag="VK150_06905"
     CDS             957..1814
                     /locus_tag="VK150_06905"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: protein motif:HMM:NF005715.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HLP31073.1"
                     /translation="MSIQTIGVIGAGQMGNGIAHVFAQAGFDVRMQDISEAFAAKGVA
                     TIDKNLQRGVDKGKMSAEEKAATLARIRTTTKLEDLAACDIVIEAATEKWEVKKQIFE
                     TLDAVCKPGAILASNTSSISITKLAAVTKRPEAFIGMHFMNPVPVMQLIEVIRGLATG
                     DATFDAVMELSKKLGKTPIACNDFPGFVSNRVLLPMINEAIYALYEGVATVESIDGIM
                     KLGMNHPMGPLTLADFIGLDTCLFILNVLHEGLGDPKYRPCPLLIKYVDAGWLGKKSG
                     RGFYDYAKA"
BASE COUNT          337 a          645 c          545 g          296 t
ORIGIN      
        1 tgcgggtctt ggaagcggcc atgggatcct cgggaatcgt ccattgtagt ggtgcccgct
       61 cgaaatggct ggtgcattca gaacctttga gggcaccacg tggcgggggt ctgggggcac
      121 ggcagtgtcc caagggaagt gtgcctcgcc agccacattg aatgacccgt gtatttcagg
      181 cgaggcacag taggctgggt gttttcctcc cgggatcccc atgctccata ccctcgcctt
      241 cgacgccgac gacaccctct ggcacaacga gacccactac gccgagaccc aggaggcctt
      301 ccgggccctg ctgcgcccct tccacgacga tgcctggatc gacgcccgcc tccatgacac
      361 cgagatgcgc aacctgggcc gctacggcta cggcatcaag ggcttcaccc tctccatgat
      421 cgagaccgcc ctgcagctca cggaacatcg cctcgacggc gcgggcgtgc agcaagtgct
      481 cgacctgggc aaggccatgc tggacaagcc cgtggagccc ctgcccggcg tggccgacgt
      541 gctgcaggcc ctggccgggg agtaccgcct catgctcatc accaaaggcg acctcttcga
      601 ccaggagacc aagctggcga gatccgggct gggcgtccat ttcgcggcgg tggagatcgt
      661 ctccgagaag gacgaggcca cctacgccgc gatcctccag cgccatggaa tcccggccgc
      721 cgccttcgcc atggtgggca attccgtgaa gtcggacatt ctgcccgtgc tggccctggg
      781 cgcccgggca gtccacattc cctaccacct gacctgggcc catgaggtgg tggaggcccc
      841 ggcagactcc cccttcccgg tgctcggctc catccgggac ctgccggccc tcctcgccag
      901 ctggtgacgc ccttctctgg attccgaggg taagcttgag ggttggagga ccccccatga
      961 gcatccagac catcggtgtc atcggcgccg gccagatggg caacggcatc gcccacgtct
     1021 tcgcccaggc aggcttcgac gtgcggatgc aggacatcag cgaggccttc gccgccaagg
     1081 gcgtggccac catcgacaag aacctgcagc ggggcgtgga caaggggaag atgagcgccg
     1141 aggagaaggc cgccaccctc gcccgcattc gcaccaccac caagctcgag gatctggccg
     1201 cctgcgacat cgtcatcgag gccgccaccg agaagtggga ggtcaagaag cagatcttcg
     1261 aaacgctgga cgccgtgtgc aagccgggcg ccatcctggc ctccaacacc agcagcatct
     1321 ccatcaccaa gctggcggcg gtcaccaagc gccccgaagc cttcatcggc atgcacttca
     1381 tgaaccccgt accggtcatg cagctcatcg aggtcatccg cggcctggcc acaggcgacg
     1441 ccaccttcga cgccgtcatg gaactctcca agaagctcgg caagacaccc atcgcctgca
     1501 acgacttccc gggcttcgtg agcaaccgcg tactgctccc catgatcaac gaggccatct
     1561 acgcgctgta cgagggcgtg gccacagtcg agagcatcga cgggatcatg aagctgggca
     1621 tgaaccatcc catgggcccg ctcaccctcg ccgacttcat cggcctggac acctgcctct
     1681 tcatcctcaa cgtgctgcac gagggcctgg gcgatcccaa gtaccgcccc tgccccctgc
     1741 tcatcaaata cgtggatgcc ggctggctcg gcaagaagag cggccgcggc ttctacgact
     1801 atgccaaggc ctgatcccgt ctc
//
LOCUS       DATGWW010000479         2909 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_153559, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000479 DATGWW010000000
VERSION     DATGWW010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153559"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VK150_06910"
     CDS             complement(<1..376)
                     /locus_tag="VK150_06910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31074.1"
                     /translation="MDLHPRHRLPFQLPGPWPACGQALLAQGAPWLQGGDTGEGLLCM
                     PGPGLNSRWDGSAWVTEWQGAPLAGSPWEALAGTLPRHPGPWIGAATYELACDEAGLP
                     RKPLAAGTLGQHWTPVVEALHVQ"
     gene            535..2007
                     /locus_tag="VK150_06915"
     CDS             535..2007
                     /locus_tag="VK150_06915"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF002073.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HLP31075.1"
                     /translation="MPSVDISSQPGKDFAGDALIVPVFSGRERHRLPLAISKVARQVM
                     DEEDFKADYLEVVPLHHPNGVKESRWMVLVGLGDEEKVSLNKIRKAVGTAARFCLKKK
                     WKKIGVLSPSTSTLDHDAVQVAVTEGALLANYDFVHFKGGKPEAKQFASIEIFTNGDD
                     TRKARRKLPMIEAGVAACHRVRDMANTPAGDLYPEVFAETAVKLAKQHKLHCDVLDVP
                     ALEKGGFRSVLAVGQGSVRPPRVVKLEYKPKEKPKKHVVLVGKGVCFDSGGLSLKDAS
                     GMETMKDDMTGAAIVLATLVACAQLEVPVQVTGLMGLVENMPSGSSYKPGDVLRSRSG
                     KTVEVLNTDAEGRLVLADLLHHAGELGADHIVDLATLTGAALIAMGDGVSAVMGTDQK
                     LVDHLMDAGGSVGEYLWQLPLVEEYTDLLKSPLADLKNITGIRWGGTITAGLFLREFV
                     GEASWAHVDLSGSWSGKERDYRTHGGSGEGPRFLLEWLMD"
     gene            2159..2455
                     /locus_tag="VK150_06920"
     CDS             2159..2455
                     /locus_tag="VK150_06920"
                     /inference="COORDINATES: protein motif:HMM:NF012442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HLP31076.1"
                     /translation="MESMETLTKADLSRHLMERLELGKKDADMLVNTFLESIIESLRT
                     GEGVELRGFGSFRLRDRRARQGRNPRSGESIQVPPKRVVYFKLGKELRSKLIDE"
     gene            2478..>2909
                     /locus_tag="VK150_06925"
     CDS             2478..>2909
                     /locus_tag="VK150_06925"
                     /inference="COORDINATES: protein motif:HMM:NF015724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HLP31077.1"
                     /translation="MRLRKLILALLAVAAVATPAFAQKKLSKEDKAKLPRIAILDFKT
                     APDCWHGWRHGGWGNQMGTISNQLRDLFTTEIIEKGKNKIRVIERERLSEIREELNFQ
                     QSGEVDTATVQKIGKLLGVKYVMTGKITRFAYKEGGFSSGWG"
BASE COUNT          543 a          921 c          970 g          475 t
ORIGIN      
        1 cctggacatg gagggcctcg acgaccggcg tccaatgctg gccgagggtg cccgcggcga
       61 ggggtttgcg gggcaggccc gcctcgtcgc aggcgagttc gtaggtggcg gcaccgatcc
      121 atggacccgg gtgccggggg agggtcccgg cgagggcctc ccaggggctt cctgccaggg
      181 gcgcaccctg ccactcggtg acccaggccg acccgtccca ccgggagttc aggccggggc
      241 ccggcataca gagcagcccc tcgccggtgt ccccgccttg caaccagggg gcgccctggg
      301 ccagcagggc ctgtccgcag gcgggccagg gcccgggaag ctggaagggc aggcggtgcc
      361 tggggtggag atccatgggg gacatcatcc cattggaatt cggaactggc tccattgact
      421 agtgttgaaa aagtggatgc taacaaattg tatttccgtg acaaataatg aacggaaaat
      481 gctcttttct tttttcgggg ttggccctag gctctttggc caggaggaac ttccatgcct
      541 tcagtggata tcagttctca gcccggtaaa gactttgcgg gagatgccct catcgttccg
      601 gtcttttcgg gtcgcgaacg ccatcgtctg cccctcgcca tcagcaaggt cgctcggcag
      661 gtgatggatg aagaagattt caaggcggac tatcttgaag ttgtgccgct ccaccacccc
      721 aatggcgtga aggagagccg ctggatggtg ctcgtgggcc tcggcgacga ggagaaggtg
      781 tcgctcaaca agatccgcaa ggccgtgggc accgccgccc gcttctgcct gaagaagaag
      841 tggaagaaga tcggcgtgct ctcgccctcc acctccaccc tcgaccacga cgccgtgcag
      901 gtggcggtga ccgagggcgc cctgctggcc aactacgatt tcgtgcactt caagggcggc
      961 aagcccgagg ccaagcagtt cgcctccatc gagatcttca ccaacggcga cgacacccgc
     1021 aaggcgcggc gcaagctgcc gatgatcgaa gccggcgtgg ccgcctgcca ccgtgtgcga
     1081 gacatggcca acacccccgc cggggatctc tatccggagg ttttcgccga aaccgccgtg
     1141 aaactcgcga aacagcacaa gctgcactgt gatgtgctcg acgtgccggc gctcgagaag
     1201 ggcggtttcc gttccgtgct ggccgtgggc cagggcagcg tccggccgcc gcgggtggtg
     1261 aagctggaat acaagcccaa ggagaagccc aagaagcacg tggtgctggt gggcaagggc
     1321 gtctgcttcg attccggcgg cctctcgttg aaggacgcct ccggcatgga gaccatgaag
     1381 gacgacatga ccggcgcggc catcgtgctg gccaccctgg tggcctgcgc ccagctggag
     1441 gtgccggtcc aggtgacggg gctcatgggc ctggtggaga acatgccctc ggggtcgagc
     1501 tacaagcccg gggacgtgct ccgcagccgc agtgggaaga ccgtggaggt cctgaacacc
     1561 gacgccgagg gccgcctggt cctggcggac ctgctgcatc acgccggcga gctgggggcc
     1621 gaccacatcg tggacctggc caccctgacc ggcgccgccc tcatcgccat gggcgacggc
     1681 gtctcggcgg tcatgggcac ggaccagaag ctggtggacc atctcatgga cgccggcggc
     1741 tccgtgggcg agtacctctg gcagctgccc ctcgtcgagg agtacaccga tctgctcaag
     1801 agccccctgg ctgatttgaa aaacatcacg ggcatccggt gggggggcac catcacggcc
     1861 ggcctcttcc tgcgcgagtt cgtgggcgag gcctcctggg cccatgtgga cctctccggc
     1921 agctggtccg ggaaggaacg cgactaccgc acccatgggg gcagcgggga gggcccccgg
     1981 ttcctcctcg aatggctcat ggactgaggc ggccgccgcg atcctggaaa aaggggggca
     2041 tttgccccct ttttttcaaa tgggtggaga tgtccccctt gaccgcgggg catggatggg
     2101 gatttattga ggactgccct caagccacct gagccccccc acccccctcg gagttcccat
     2161 ggaatcgatg gagaccctca ccaaggccga cctgtcccga cacctgatgg aacggctgga
     2221 actgggaaag aaggacgcgg acatgctggt gaacaccttc ctcgagagca tcatcgaatc
     2281 cctgcgaacg ggcgagggcg ttgaactccg gggattcggc agcttccggc tgagggaccg
     2341 ccgggcccgc cagggccgca atccccgcag cggggaaagc atccaggtgc cgcccaagcg
     2401 ggtggtctat ttcaagctcg gcaaggaact tcgcagcaag ctcattgacg agtgaaccca
     2461 cttccaacgg agtcaccatg cgccttcgca agctgatcct ggccctcctg gccgtggccg
     2521 cggtcgcaac accggccttt gcccagaaga aactctccaa ggaggacaag gcgaagctcc
     2581 cccggatcgc catccttgat ttcaagacgg cccccgactg ctggcacggc tggcgccacg
     2641 gcggctgggg caaccagatg ggcaccatct ccaaccagct ccgtgacctt ttcaccaccg
     2701 agatcatcga gaagggaaag aacaagatcc gcgtcatcga gcgcgagcgc ctgtcggaga
     2761 tccgcgagga actgaacttc cagcagagtg gcgaggtcga tacggccacc gtgcagaaga
     2821 tcggcaagct gctgggcgtg aagtacgtga tgaccgggaa gatcacccgc ttcgcctaca
     2881 aggagggcgg cttcagctcc ggctggggc
//
LOCUS       DATGWW010000480         4417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_114451, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000480 DATGWW010000000
VERSION     DATGWW010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4417
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114451"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..791)
                     /locus_tag="VK150_06930"
     CDS             complement(<1..791)
                     /locus_tag="VK150_06930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31078.1"
                     /translation="MRWFRSFVTLLLPALLLLPTQGTAQKRGAEAPWREGGWTGAFAT
                     LRPTLPGKAGQLEAAGPIPAEARIRLYRVEDPDTFLKKVILDRGNTVAEGARGAQDPL
                     DVLREAVLWGGRRAFVTVHRTASQVLRDAAKQTDRLTSARTSPGRVREGSALPLEGQP
                     GITFVTEIVPRIKEDITGKRGHEDDESGDDGFLSRVELPAQAAGLYLVEVLRGSDAAY
                     VPWLVTDLALLSEQDGGRLRLQAVDARDGSPRAGVAGQLLEGAKA"
     gene            complement(793..1746)
                     /locus_tag="VK150_06935"
     CDS             complement(793..1746)
                     /locus_tag="VK150_06935"
                     /inference="COORDINATES: protein motif:HMM:NF018387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1175 family protein"
                     /protein_id="HLP31079.1"
                     /translation="MTPWRAMAAAGALAAAAFATLAPVRHRVSLTSDPANPVQVVRVD
                     SRSLAGWKRPGWGVALSGPPAWGGAAEGFFLTVDRSTEAVVTAWPHFRQSLSIQPTVA
                     ARPSALAEEGDREAFRAWFVAILEQQAEALSPAWEPEQRDCAGLLRFAFREALAPHTE
                     AWRARVAFTTGPAGQDPSPSFAAAWRRGFPTPDGPQAFAKGAFLRRLSCVPLGRDLQL
                     ARPGDLIFFARGGARLQPDHAMAFVRPDVDSAPMLLYHTGPEGAGATRQPGEVRRARL
                     DDLLHHPDPDFRPVPENPAFLGLYRWRLLAGDSFEPSTPRS"
     gene            complement(1743..3923)
                     /locus_tag="VK150_06940"
     CDS             complement(1743..3923)
                     /locus_tag="VK150_06940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31080.1"
                     /translation="MRNIAWSRCVPAVAGLALALPAHAQVPAWAQEQVRAWSVYHYDA
                     RGNQSWTGKKWEQSSPDDQRAEALSRLRNPGDRRTALWALSAWPVGTWADTALERGGA
                     EAAHFLCQRGYRQGGVDPLAYLGSPDRVDRPWTHGLGLHLDKGGWRFQWIPSPALFTQ
                     TGQAALPKGLDLAAQPGALIHLRQLRPGLERLVALAGGRGGQDTGGQDAGVVTALAQS
                     SRAGFMVRHLEPWLKQASPALEPLAQREAWVLHYGGGADRDGARGLQGTLVFIPGDLP
                     ARTQLMMALLKLNPMSSGARSRVVTWKGAGGSTDVQQLRGAGGVFHLIQKAEGTWISD
                     REAPLRALLFPGAAPMLGERQEWARVALSAMAPDTELSFWIAPRIGADAAFENQALRR
                     RLAGTQQGTWPNPFVAKAAPRTGALTLSLGAGPTEKLVDALLRVDDDTAFTVPQMPEF
                     ANGGQALTPTQMKAYQEAVGRAQDRQRQRTALRQDAAALQACLDLRGAALLWNGWVGA
                     PALSPVEQASLAELARLRREDPWRAMQAQRDGKIVAFGGFGEPGMAPSLALALPIQGA
                     KRLQVENLLKKLLPRLFKGQNQKQAFGASEIHRVMTAQAFRPAWTLVADTLVLGTDEA
                     AVKAVSAGLQGQAPTLADSESRAWGRMELDGARASKELENLLLAFLRSRTGSGWWIGE
                     TTSADEAAGELAFSLGPFLGAVKALGPVRIEWSWTAGGLEGRPR"
     gene            4043..>4417
                     /locus_tag="VK150_06945"
     CDS             4043..>4417
                     /locus_tag="VK150_06945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31081.1"
                     /translation="MSEAQPNRRVLHNLRGVLTPDPKGTWAVDRIPDAALAVENGRVA
                     WLGPAADLPAAWSEAPRIDGGGAWATPGFVDPHTHLLFGGNRSGEFNRRLHGASYQQV
                     AAEGGGIRETVRATRLAPVAELV"
BASE COUNT          590 a         1599 c         1653 g          575 t
ORIGIN      
        1 tgggccttgg ccccttccag cagctggccg gcgacacccg cccggggcga gccgtcgcgg
       61 gcatccaccg cctgcaggcg aaggcgcccg ccatcctgtt cggagagcag ggcgaggtcc
      121 gtcacgagcc aaggcacgta ggccgcgtcg ctgccgcgca gcacttccac caggtagagg
      181 cccgcggcct gggccggcag ttccacgcgg ctgaggaacc cgtcgtcgcc ggattcgtcg
      241 tcttcatggc cccgcttgcc ggtgatgtcc tccttgatcc tgggcacgat ctccgtgacg
      301 aaggtgatgc ccggctgacc ttccaacggc agcgcggaac cctcccggac cctgccgggg
      361 ctggtgcggg cggaggtgag ccggtcggtc tgcttggccg cgtcgcgcag cacctggctg
      421 gcggtgcggt ggaccgtcac gaaggcccgc cggccgcccc agagcaccgc ctcccgcagc
      481 acgtcgaggg gatcctgggc gccccgggcg ccttcggcca cggtgttgcc gcggtccagg
      541 atgactttct tcaggaaggt atcgggatcc tccacccggt agaggcggat gcgggcctcg
      601 gcggggatgg gccccgccgc ctccagctgc cccgccttgc cgggcagggt gggacggagc
      661 gtggcgaagg cgccggtcca gccgccttcg cgccagggcg cctcggcgcc ccgcttctgg
      721 gccgtgccct gggtgggcag caggaggagc gcgggcagga ggagggtgac gaaggaacgg
      781 aaccagcgca tgtcaggacc tgggagtgga aggttcgaag gaatcgcccg ccagcaggcg
      841 ccagcggtag aggccgagga aggcggggtt ctcgggcacg gggcgaaaat cggggtcggg
      901 atggtggagc aggtcgtcca gacgggcccg gcgcacctcg ccgggctggc gggtcgcgcc
      961 ggcgccttcg gggccggtgt ggtagagcag catgggcgcg ctgtccacgt cgggacgcac
     1021 gaaggccatg gcgtggtccg gctgaagccg ggccccgcct cgggcgaaga agatcaggtc
     1081 gccgggacgg gcgagctgga ggtcgcgccc cagcggcacg caggacagcc gccggaggaa
     1141 ggcccccttg gcgaaggcct ggggtccgtc gggcgtcggg aagccccgcc gccacgcggc
     1201 tgcgaaggag ggagacgggt cctgtcccgc gggcccggtg gtgaaggcca cgcgcgcgcg
     1261 ccaggcttcg gtgtggggcg cgagggcctc acggaaggcg aagcggagca gccccgcgca
     1321 gtcccgctgt tccggttccc aggcggggct cagggcttcc gcctgctgct cgaggatggc
     1381 cacgaaccac gcccggaacg cctcgcggtc gccctcttcg gccaaggccg agggcctggc
     1441 ggccaccgtg ggttgaatgg acagtgactg tctgaaatgg ggccaggcgg tgaccacggc
     1501 ctcggtggac cggtccaccg tcaggaagaa accctccgcc gcgccacccc aggccggcgg
     1561 tcctgacaac gccacgcccc agccaggccg cttccagccc gcgaggctgc ggctgtccac
     1621 gcgaaccacc tgcaccgggt tcgcgggatc cgacgtcagg ctgacccggt gccggaccgg
     1681 cgccagggtc gcgaaggcgg cggcggccag ggccccggcc gcagccatgg cgcgccaggg
     1741 ggtcatcgcg gacgtccctc caggccgccc gccgtccagc tccactcgat ccgcacaggc
     1801 cccagggcct tcacggcgcc caggaagggc cccaggctga acgccagctc tccggcggcc
     1861 tcgtcggcgc tggtggtctc gccgatccac cagccgctgc cggtgcggct gcggaggaag
     1921 gccaggagga ggttctccag ttccttggag gctcgggcgc catccagttc catgcggccc
     1981 caggcccggg actcgctgtc cgcgagggtg ggcgcctggc cctgcagccc cgcggagacg
     2041 gccttcacgg ccgcctcgtc ggtgcccagc accagggtgt cggccaccaa ggtccaggcg
     2101 ggccggaagg cctgggcggt catgacccgg tggatttccg aagccccgaa ggcctgcttc
     2161 tggttctgcc ccttgaacag gcgcggcagc agcttcttga ggaggttctc cacctgcagg
     2221 cgcttggcgc cctggatggg cagcgccaaa gccaggctgg gggccatgcc cggctccccg
     2281 aacccgccga acgcgacgat cttgccgtcg cgctgggcct gcatggcgcg ccagggatcc
     2341 tcgcgccgca ggcgggccag ttcggcgagg gaggcctgct ccacggggga gagggccgga
     2401 gcgcccaccc agccgttcca cagcagggcc gcgccccgga ggtccaggca ggcctgcagg
     2461 gccgcggcgt cctgccgcag cgcggtccgc tggcgctggc gatcctgggc gcgtcccacc
     2521 gcctcctggt acgccttcat ctgcgtgggc gtgagggcct ggccgccatt ggcgaactcg
     2581 ggcatctggg gcaccgtgaa ggcggtgtcg tcgtccaccc ggaggagggc gtccaccagc
     2641 ttctccgtgg ggcccgcgcc cagggacagg gtcaacgcgc cggtccgggg cgcggccttg
     2701 gccacgaagg ggttgggcca ggtgccctgc tgggttccgg ccagacggcg gcggagcgcc
     2761 tggttctcaa aggcggcgtc agcgccgatg cggggcgcga tccagaacga aagctccgtg
     2821 tcgggggcca tggcggagag ggccacccgc gcccactcct ggcgttcgcc cagcatgggc
     2881 gcggcccccg gaaacagcag ggcgcgcagc ggagcttcgc ggtcgctgat ccaggtgccc
     2941 tcggccttct gaatgaggtg gaagacgccg cccgcgccgc gcagctgctg cacgtcggtg
     3001 ctgccgccgg cccccttcca ggtcaccacc cgggaccggg cgccggagct catgggattg
     3061 agcttgagca gggccatcat cagctgcgtg cgggccggga ggtccccggg aatgaagacg
     3121 agggtgccct gcaggccgcg ggcgccgtcc cggtccgcgc cgccgccgta gtgcagcacc
     3181 caggcctcgc gctgggcgag gggttccagg gccggggagg cctgcttcag ccacggttcc
     3241 aggtgccgca ccatgaagcc cgcgcggctg ctctgggcca gggccgtgac cacgccggca
     3301 tcctgtccgc cggtgtcctg gccgccccgg ccgcccgcga gggcgacgag ccgttcgagg
     3361 ccgggccgca gctgcctcag gtggatgagc gccccgggct gagccgccag gtccaggccc
     3421 ttgggcagcg ctgcctggcc ggtctgggtg aagagggccg ggctggggat ccactggaag
     3481 cgccagccgc ccttgtccag gtgcaggccc agtccgtggg tccagggtcg gtccacccgg
     3541 tcgggagaac ccaggtaggc gaggggatcc acgccaccct gccgataccc acgctggcag
     3601 aggaagtgcg ccgcctcggc gccgccccgc tccagggcgg tgtcggccca ggttcccacg
     3661 ggccacgcgc tcagggccca caaagcagtc cggcggtccc cggggttgcg caggcgcgac
     3721 agggcctcgg cccgctgatc atcagggctg gactgctccc acttcttccc cgtccagctc
     3781 tggttcccgc gggcatcgta gtggtagacc gaccaggcgc ggacctgctc ctgggcccag
     3841 gccggcacct gggcatgggc cggaagcgcc agggccagcc ccgccacggc cggcacacac
     3901 cggctccagg cgatgtttcg catccaaatc cccctgcccc gcactggacc ctccgatgtg
     3961 gagcgatcct atcaagccgg cccccctgcg caaggcatcc agctgtgatt ttttctgcct
     4021 tcgtccctgg cagactggtt ccatgtccga agcccagcca aaccgccgcg tgctccacaa
     4081 cctccggggc gtcctgacgc ccgaccccaa ggggacctgg gccgtggacc gcatcccgga
     4141 cgcggccctg gccgtggaga acggccgcgt ggcctggctg ggccccgcgg cggacctgcc
     4201 cgccgcctgg tcggaggcgc ccaggatcga cggcggcggc gcctgggcga cgccgggctt
     4261 cgtggatccg cacacccacc tgctcttcgg cggcaaccgc tcgggcgagt tcaaccggcg
     4321 cctgcacggc gccagctatc agcaggtggc cgccgagggc ggcggcatcc gcgagaccgt
     4381 ccgggccacc cgtctcgcgc cagtggcgga gctggtc
//
LOCUS       DATGWW010000481         2802 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_380845, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000481 DATGWW010000000
VERSION     DATGWW010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2802
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380845"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1018)
                     /locus_tag="VK150_06950"
     CDS             complement(<1..1018)
                     /locus_tag="VK150_06950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31082.1"
                     /translation="MDALTRTFRIDPEFRDRIPAPNAEAFAGLEADILADGAILDPLK
                     IWQEEGILLDGHHRYTLAQKHGIPFQVHMVSLPDRDAALDWIDRHAIHQRNLPPKAES
                     MIRGRIYNRAKKAHGGQIPGSSGQSDHSLKTAQDLAPELGVSEKTLRRDGEFAEAVDK
                     LHLGPEVTQGKVQAPRAKVIKVAKDLPENPTPKQVEKAKKVLEAPESPKPAPKKPDDK
                     DARIVQLERLLAERDGELSTLKAKVSDLQAKLAEAGCQVEELHEENESMRRILEGDDR
                     LKSMLEEVGMLREKARVAESQRNGYMDEAHDLAKRLKSANRKIQKQGGKPVDEPKKPA
                     ASEED"
     gene            complement(1022..1288)
                     /locus_tag="VK150_06955"
     CDS             complement(1022..1288)
                     /locus_tag="VK150_06955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31083.1"
                     /translation="MSNHKRKPLSTVALEAACTAMDVATRGAMSSRDMELLEAKTLLR
                     DANASVPLVNGVLDALDAYLLDFSDESLSLLRHQRDLARIYWPE"
     gene            complement(1285..1431)
                     /locus_tag="VK150_06960"
     CDS             complement(1285..1431)
                     /locus_tag="VK150_06960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31084.1"
                     /translation="MNLIPAWLRNLITPRTKPKPKPWEDPNRSPQDREAWRRAEPKSL
                     RRSA"
     gene            complement(1428..1613)
                     /locus_tag="VK150_06965"
     CDS             complement(1428..1613)
                     /locus_tag="VK150_06965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31085.1"
                     /translation="MTLRHDAKQCRQRLTSDQIRISQGIYTPQERQAMEDAERKRQLA
                     QAKEAAKGAPLLMEGLE"
     gene            complement(1610..1996)
                     /locus_tag="VK150_06970"
     CDS             complement(1610..1996)
                     /locus_tag="VK150_06970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31086.1"
                     /translation="MTVLPPYMHEYSGWKIHGKWDDRKKGWDCLAIKGDLEMASEDMN
                     WHQFISALDRVDGKSKLQDYLESTDPARIWAWMPPPGQGIPRRRSDGLPVVKQRPNTV
                     VPEIHMPPPPRVLATTASPLFDLEGL"
     gene            complement(1993..2292)
                     /locus_tag="VK150_06975"
     CDS             complement(1993..2292)
                     /locus_tag="VK150_06975"
                     /inference="COORDINATES: protein motif:HMM:NF024784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HLP31087.1"
                     /translation="MSADLVTRLEAQTAFEPNTGCWIFHGCWDKDGYGKVSVKNKIVR
                     VHQAAYAALVGKLRRGQEIDHKCTNRACWNPAHLEAVSRACNCRRIFSRRREVAA"
     gene            complement(2289..2444)
                     /locus_tag="VK150_06980"
     CDS             complement(2289..2444)
                     /locus_tag="VK150_06980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31088.1"
                     /translation="MKTPLITVSFWIPLALLIQINRDARARGMSRDAWIRAAVEAQFP
                     EEAQVAS"
     gene            complement(2441..2614)
                     /locus_tag="VK150_06985"
     CDS             complement(2441..2614)
                     /locus_tag="VK150_06985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31089.1"
                     /translation="MTAILDALMRFGEAILAVALLVASVGLVYPYWSRDDAPERPNRR
                     QRRSWRLAKRVLR"
     gene            complement(2611..>2802)
                     /locus_tag="VK150_06990"
     CDS             complement(2611..>2802)
                     /locus_tag="VK150_06990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31090.1"
                     /translation="SLALKEEGAFNSRLVDAISDDVVDAAEADDLDRGISKIQQFLSA
                     MRERLAEAKETEKAHGRPA"
BASE COUNT          417 a          880 c          936 g          569 t
ORIGIN      
        1 cgtcctcttc ggaggcggcg ggcttcttcg gctcatccac gggcttcccg ccctgcttct
       61 ggatcttccg attggcgctc ttcaggcgct tggcgagatc gtgggcctcg tccatgtagc
      121 cattgcgctg gctctcagcc acccgggcct tctcccggag catgccgact tcctccagca
      181 tggacttgag gcggtcatcc ccttccagga tgcggcgcat gctctcgttc tcctcgtgca
      241 gctcctctac ctgacacccg gcctcggcaa gcttcgcctg gagatcggaa accttggcct
      301 tgagcgtgga cagctcccca tccctctcgg ccaggaggcg ctccagctgc acgatccggg
      361 cgtccttgtc gtcgggcttc ttcggggccg gcttgggcga ctccggggcc tccaggacct
      421 tcttggcctt ctcgacctgc ttcggggtcg gattctcggg cagatccttg gccaccttga
      481 tgaccttcgc ccggggggcc tggaccttcc cctgggtcac ttcgggaccg aggtggagct
      541 tgtccacggc ctcagcaaac tccccatccc ggcggagcgt tttttcggag acgcccagct
      601 cgggagccaa gtcctgcgcg gttttgaggg agtggtcact ttgaccactc gatcccggga
      661 tctgaccccc atgggccttc tttgcccggt tgtagatccg tccccggatc atggattcgg
      721 ccttcggggg gaggttccgc tggtggatgg cgtggcggtc gatccaatcc agggcggcat
      781 cccggtcagg gagggagacc atgtggacct ggaagggaat cccgtgcttc tgggccaggg
      841 tgtagcggtg gtgcccgtcc aggaggatgc cctcttcctg ccagatcttg aggggatcca
      901 gaatcgcccc gtcggccagg atgtcggcct ccagaccggc gaaggcctcg gcattcggcg
      961 cggggatgcg gtcccgaaac tcggggtcga ttctaaaggt gcgggtcagg gcgtccatgg
     1021 gctactccgg ccagtagatc cgggccaagt cgcgctggtg ccggaggagg gaaaggcttt
     1081 cgtcgctgaa gtccaagagg taggcgtcca gggcatccaa taccccattg accaggggga
     1141 cggaggcgtt ggcgtccctg aggagggtct tggcctccag cagttccata tcccggctgc
     1201 tcatggcacc ccgggttgcc acatccatgg cagtacaggc agcttccagg gccaccgtcg
     1261 aaaggggctt gcgcttgtgg ttgctcatgc cgacctcctg aggctcttgg gctcggccct
     1321 gcgccaggct tcacggtcct ggggggagcg gttggggtcc tcccagggct tgggcttggg
     1381 cttggtcctg ggggtgatga ggttgcgtag ccatgcgggg atgaggttca ttcgagacct
     1441 tccatgagta ggggcgcccc cttcgcagcc tctttggcct gggcaagctg ccgcttgcgc
     1501 tcggcatctt ccatggcctg gcgctcctgg ggcgtgtaga tgccctggct gattcggatc
     1561 tgatcggagg taaggcgctg gcggcactgt ttcgcgtcgt ggcgaagggt cataggccct
     1621 ccagatcaaa gagaggtgat gcggtggtcg cgaggacccg gggcggagga ggcatgtgga
     1681 tttcagggac cacggtattg ggcctctgct tcaccactgg gagcccatcc gaacgcctcc
     1741 gggggatgcc ttggccaggg ggcggcatcc atgcccatat ccgggcgggg tccgtcgatt
     1801 cgaggtaatc ctggagtttg gacttgccgt caacgcgatc aagagcgctg atgaactggt
     1861 gccagttcat gtcctcgctg gccatctcca ggtcgccctt gatggccaga cagtcccatc
     1921 ccttcttccg gtcatcccac ttcccgtgga tcttccaccc ggaatattca tgcatatatg
     1981 ggggtaggac ggtcatgcgg ccacctcacg ccgtcgagag aagatccgcc ggcaattgca
     2041 cgcgcggctt acggcctcaa ggtgggcggg gttccagcaa gcccggttgg tgcacttgtg
     2101 gtcgatctcc tggccccttc ggagcttccc gaccagggct gcataggcgg cctggtggac
     2161 ccggacaatc ttgttcttca ccgacacctt gccgtagccg tccttgtccc agcagccatg
     2221 gaatatccag catccggtgt tcggctcgaa ggcggtctgg gcctcaagac gggtcacgag
     2281 gtcggcgctc atgacgccac ctgcgcttcc tcggggaact gggcctcgac agcggcccgg
     2341 atccaggcgt cccggctcat cccccgggcc cgagcgtccc ggttgatctg gatgagcagg
     2401 gctaagggaa tccagaagga gacggtgatc agcggggtct tcaccggagc acccgctttg
     2461 cgaggcgcca ggagcggcgc tggcgacggt tggggcgctc gggggcgtca tcacgggacc
     2521 agtacggata cacgaggccc acgctcgcga ccagaagggc gacggccaag atggcttcac
     2581 cgaacctcat cagggcgtca aggatggcgg tcatgctggc ctcccgtggg ccttctcggt
     2641 ttccttggcc tcggccagcc gctcccgcat ggcgctcagg aactgctgga tcttggaaat
     2701 gccacggtcc aggtcatcgg cctcggcggc gtccaccacg tcatccgaaa tggcgtccac
     2761 caagcgggag ttgaaggcgc cctcttcctt gagggcgagg ga
//
LOCUS       DATGWW010000482         1818 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_114508, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000482 DATGWW010000000
VERSION     DATGWW010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114508"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..475)
                     /locus_tag="VK150_06995"
     CDS             complement(<1..475)
                     /locus_tag="VK150_06995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31091.1"
                     /translation="MIAPQAPPPTAAPAPAVVAPAPVSPTIRAQYGWGYAGPEGEGVG
                     TLSLLMNGATGRLVVELHGPGERLLLLEGDHASGYRLQVPRQKLDQRAPYLAQLPLPF
                     LPQMPSVEALLRLLRTGEGAGVSVLKKDAQGPLKLHWRGKDARGKDEQVWLDRKRW"
     gene            complement(472..>1818)
                     /locus_tag="VK150_07000"
     CDS             complement(472..>1818)
                     /locus_tag="VK150_07000"
                     /inference="COORDINATES: protein motif:HMM:NF024821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP31092.1"
                     /translation="RALIHARATQDYEGKREALLALNARNPEDRHLRFLEELAREQIK
                     SGYLAHAEESFLLLARQLPQEAGLWENVSLIRLQTSRFAEALETLAKAEALKPSPTLT
                     FHTARALMNLGRFEEAERRLQPLAHREVEPEWVADGVPMLYAESLLLQGKGKTLLAFL
                     KDRRSRPRTDGEAQVFKTQALISLNDWKSALEALKEGIARHPKIPLFREAAKLPSRDL
                     EYRFFSRKETRAALEQLHLEGMAALWQEFQRWDKCLEALERAHSLSSTRSVDMLILQS
                     QAYDQVGRHAESLKMLRQAQALEPDNPLVQNNLGYLLLEQDLDLEEAAALIEASAKAT
                     PDNGNVVDSLGWAQFKLGRIAEAEATLRRAAELSPFSPEVRKHLGEVLVKQGKLAEAA
                     EQWDRALAFVFPERAALEKRLGDLRVRIAKEQAAKLDAPAQPATPAAVPDDDEEDQ"
BASE COUNT          225 a          628 c          666 g          299 t
ORIGIN      
        1 cccagcgctt gcggtcgagc cagacctgct cgtccttgcc ccgggcatcc ttgccgcgcc
       61 agtggagctt cagggggccc tgggcgtcct tcttcagcac ggagaccccg gcgccctcgc
      121 cggtgcgcag gaggcgcagg agggcctcca cgctgggcat ctggggcagg aagggcagcg
      181 gcagctgggc gaggtacggg gcgcgctggt cgagcttctg cctcggcacc tgcaggcggt
      241 agccggaggc atggtcgccc tccagcagca gcaggcgctc tccgggcccg tgcagctcca
      301 ccaccaggcg gccagtggcc ccgttcatca gcaggctgag ggtgccgacg ccttcgcctt
      361 cgggccctgc gtagccccag ccgtactggg cgcggattgt gggcgagacc ggcgcggggg
      421 ccaccaccgc cggggcgggg gcggccgttg gcggcggcgc ctggggcgcg atcactggtc
      481 ctcctcgtcg tcatccggaa ccgccgccgg ggtcgcgggc tgcgccggcg cgtcgagctt
      541 ggccgcctgt tccttggcga tgcgcacccg caggtcgccc aggcgctttt ccagggcggc
      601 gcgttcgggg aagacgaagg ccagggcccg gtcccactgc tccgcggcct cggcgagctt
      661 gccctgcttc accagcacct cgccgaggtg cttgcgcact tcggggctga aggggctcag
      721 ctccgcggcc cggcgcaggg tggcctcagc ctcggcgatg cggcccagct tgaactgggc
      781 ccagcccagg ctgtccacca cgttgccgtt gtccggcgtg gccttggcgc tggcctcgat
      841 gagcgccgcg gcctcctcga ggtcgaggtc ctgctccagc agcaggtagc cgaggttgtt
      901 ctgcaccagc ggattgtcgg gctccagggc ctgcgcctgg cggagcatct tcagcgattc
      961 ggcgtggcgg cccacctggt cgtaggcctg gctctgcagg atgagcatgt ccacgctgcg
     1021 ggtggaagac aggctgtggg cgcgctccag ggcctcaagg cacttgtccc agcgctggaa
     1081 ttcctgccag agtgccgcca tcccctccag gtgcagctgc tccagcgccg cacgggtctc
     1141 cttccgggag aagaagcggt actcgagatc ccgcgaaggc agcttcgccg cctcccggaa
     1201 gaggggaatc ttcgggtggc gggcgatgcc ctccttcagg gcctccaatg cgctcttcca
     1261 gtcgttcagg ctgatgaggg cctgggtctt gaacacctgg gcctcgccgt ccgtgcgggg
     1321 cctcgagcgg cggtccttca ggaaggcgag cagggtcttg cccttgccct gcagcagcag
     1381 ggattcggcg tagagcatgg gcacgccgtc ggcgacccat tctggttcca cctcgcggtg
     1441 cgccaggggt tgcagccgcc gttccgcctc ctcgaagcgg ccgaggttca tgagggcccg
     1501 ggcggtgtgg aaggtgagcg tggggctggg cttcagcgcc tccgccttgg ccagggtctc
     1561 cagcgcctcg gcgaagcggg acgtctgcaa gcggatcagg gagacgttct cccagagacc
     1621 cgcctcctgg ggcagctgcc gcgccagcag gaggaagctc tcctcggcat gggccaggta
     1681 gcccgacttg atctgctccc gggccagctc ctccaggaag cggaggtggc ggtcttcggg
     1741 attccgggcg ttcagcgcca gcagcgcctc gcgcttgccc tcgtagtcct gggtggcccg
     1801 ggcgtggatc aaggccct
//
LOCUS       DATGWW010000483         5099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_445861, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000483 DATGWW010000000
VERSION     DATGWW010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5099
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_445861"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..231
                     /locus_tag="VK150_07005"
     CDS             <1..231
                     /locus_tag="VK150_07005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31093.1"
                     /translation="LEPDDPAGQEALLRLQSRWFTAAEVARMEEILAARRTELSRGYD
                     PYAITGIVEQLSDLCRERSVPLPLRSAMGRCL"
     gene            1511..2161
                     /locus_tag="VK150_07010"
     CDS             1511..2161
                     /locus_tag="VK150_07010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31094.1"
                     /translation="MGLQNAPAHFQWVMETIVHDPQKRPLPAIILLDDTTTYHDDLDA
                     CLEDGVEAILRLTGAGAMVGPAKCVLGADEAEHMGEQWYSGGLFRPPKGRLEALLELG
                     AQQLADWPRAKLFGLLNYWRGYVPDFAARTTRLRALLSADAAPWRQEHQEELESLVRA
                     MLAEVPTINLLPGDPVILETHVGPKGLAGVYLQRDPKGGRWLPVATYSRELAPAEL"
     gene            3422..4048
                     /locus_tag="VK150_07015"
     CDS             3422..4048
                     /locus_tag="VK150_07015"
                     /inference="COORDINATES: protein motif:HMM:NF012870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HLP31095.1"
                     /translation="MRRLAGSYRARGQELETLSNPYGVEPLQHWVSVPPIAMRADIIR
                     DTHEATGHVGRTKLAEALLAAYWWPDLRAQVALEVARCPACQPEHVGGERSTELPPAP
                     ADRPSAPFQGWSVDLAGPFPPDADGNRYLAVAVDVFTKWVEADAIPNKRAFTTASWFY
                     DAVVCRWGRPLFVRLDHGTEWEAEFRAQLRRLHIAVRQGTVGNSRANG"
     gene            4304..4525
                     /locus_tag="VK150_07020"
     CDS             4304..4525
                     /locus_tag="VK150_07020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31096.1"
                     /translation="MVQRVETIRTHTAAQLTRQDKRLQAAHRRRDASAIAPATMFLFK
                     PGDLVLQRTKAWARGSRLVAKGQGPYRVL"
BASE COUNT          837 a         1601 c         1797 g          864 t
ORIGIN      
        1 ctggagccgg acgatcccgc cggccaggag gccctcctgc gcctgcagtc ccgctggttc
       61 acggcagcgg aggtcgccag gatggaggag atcctagctg ctcgccgcac cgagctctct
      121 cgcggctatg acccctacgc cattacgggg attgtggagc agctgtcgga cctctgccga
      181 gagaggtcag tacccttgcc ccttcgctcc gcgatggggc ggtgccttta acgacgctgg
      241 cctggcacca agggtacccc caccgtccga gctatgttgg cggacatcat ccagaccttc
      301 gagtctggtg gccaggaggc cctcaccacc ctcctccggc gacatgactt ccgtggatgg
      361 gtgcccacgc agtggccaca gcggaccggc ggcgcccgcc aggggcccag ccgtcaggca
      421 ggggggggcc agcagcagca gtagggggcc agccgtcagg cagggggggg ccagtagcag
      481 cagcagggtt ccagccgtcc atggcggccc acctccacca gttggcgtcg gtccagctga
      541 gtggccccag gctgtctagg ccttagagac ggtgagggga gagctgcggg cctggcagtc
      601 ctctatgggg ggtgccctct gggccaggct aggcctggag gggctttgtt agcgctgtga
      661 gcgggtggtt ggcccctgtc tcgattagcg agacggccag tggtagtccc ctgctgaggg
      721 ggggatgcca cacctgtacc atgtcactgt gctggcaggg taaggggggc caggggacag
      781 gggccagggg ctacatggcc agggatctat ggttgggggg ccattagtag cagtagcgcg
      841 tgagggggag aagcccttgg aaccagagcc taccgaggca gaggttcagg ggtggataga
      901 ggattgggag ctgacagcag ctataccata gcaccactgg gacagggcat acaaggcgct
      961 tcgcaagttg aagtttgggg ccagggtgac gcgggattag cgggttaggg tgtttcagat
     1021 gctggcccct gccataccgc gcatggcagt gggctagtat gagctggggg agttcaggga
     1081 cccccagttc gatttcaggc tggagctggg ggacgtgacc cctatccagc aggcccccat
     1141 caggttggca cccgacgcag aggcgtgggt gggggagtgg ttggttgagc agtagaggaa
     1201 gggactggta cgcagggctg ggcgttatga ggacctacca gtagtcacct ccctcctgct
     1261 ggttcctggg tagcagcatg ggtagcggta ccgggtagtc cagaacctgg tgccgctgaa
     1321 caagaggacc aaaaccctgc gctacccctc cacagatgtt aggcggacga agttggcact
     1381 aggcaggagc aagttcatat cccaggtgga cttgaaggca ggattctaca actgccgcct
     1441 ccagccagat tcctagccct tcaccgcctt cagcacgtag caggggacgt ttgtctggac
     1501 gaggatgacc atgggtctcc agaacgcccc tgcccacttc cagtgggtca tggagaccat
     1561 cgtccatgac ccccagaagc gtccactccc agccatcatt ctgttggacg acaccaccac
     1621 ataccacgac gatttggatg cctgtttgga ggatggggtg gaggcaatcc tgcgtttgac
     1681 tggggctggg gccatggtag gcccagccaa gtgtgtgctg ggggctgatg aggcggagca
     1741 catgggggag cagtggtata gtggtgggtt gttcaggccc cctaaggggc ggctggaggc
     1801 gcttttggag ttgggagccc aacagctggc ggattggcct agggcgaagc tgtttgggct
     1861 cctcaactac tggagggggt acgtgccgga ttttgctgcc cgcaccactc gcctccgcgc
     1921 cctgctgtca gcggatgcag caccgtggcg gcaggagcac caggaggagc tggagtccct
     1981 agtcagggcc atgctggcgg aggtccctac catcaacctc ctgccagggg atccagtcat
     2041 cctggagacg catgttgggc ccaaggggct cgcgggggtc tacctgcagc gagaccccaa
     2101 gggggggaga tggctcccgg tcgccaccta ttcccgggag ctcgccccag ccgagttgta
     2161 gcgccctgcc gttgtcctgg aggcggctgc tgcccaggag accgccctga agctccccta
     2221 cgtcagcctg agtgggggtt agctcaggtg gatggtctcc ccatcactcc atgccttgct
     2281 gaaggcaagg aaccaccttg gtccagagct gacctggcgt gtggcggacg ccctcagctg
     2341 gggcctacag ccggagctcc agctagctgg caccacccac ttacctcctg gctgggcatg
     2401 ggaccctgag aacacgtggg agttggacga ggatgacgcc ccactagacc cagagttcct
     2461 tagggaggtc tcagccccag ctagggttcc taggcgaggg gtctttgccc gaggcccata
     2521 tgtccacatc cagtttgatg ggggggcagc ccgcgagggc atagccacag ctgggttcct
     2581 catcgtggac accaggggcc aggaggtggt gcggcgtggg gtcccccttg gtaggggcct
     2641 caccaacaac gatgccgagt ccacagcagt tcgcctggcg ctggaggacc tcgcagccag
     2701 atagctggcg ggggagccat acctggacgc ccccatccgc gtgctgggcg attcacagat
     2761 gatagtgcgg ctcctgcttg gcatctaccg gaaggcgcgc aaaccctcac tctacctctg
     2821 tgtagagggg gtcaagacct tagcgcggcg gatgaagtgg aggatcgcct tccggtacat
     2881 cccccgccag ctcaactccg tccctgatga catgtgtcgc cgtgccaagg cagcaggcgt
     2941 cctggtggag tatgttggcg gcgaggttcc ctctgacgcc cctgaggtgg atttggcggc
     3001 cctgtaccga gtggtggacg ggttggcggc tggggctcgg cacatcagtt acgttggccc
     3061 gcctggggcc cccgctgggg accctatagg tggtgctgac gtggaggacg atgacggggg
     3121 ccctgcccca gacgatgctg ccgtcatcct ggcggcctgg gacgaccgcc ttaggggcgt
     3181 cccgtgcggc gtgtgcgctg gggtggaccg ggaggaggcc atgctggtct gtgatcgctg
     3241 cggggaccca ttccatgccg agtgccagcc cttcagccct gctggcgacg gcccatggta
     3301 ctgttcctag tgccgaggcc gcatccggat ccatggttcg tccgacccca tagaggacct
     3361 ggagctgctg gattacctct tccggggggt cctaccggat gacgttgacc tcgccgaccg
     3421 cgtgcgccgc cttgctgggt cctatcgggc caggggccag gagttggaga ccctctccaa
     3481 tccctatggc gtggaacccc tccagcactg ggtgtccgtc ccccccatcg ccatgcgggc
     3541 tgacatcatc cgggacaccc atgaggcgac gggccatgtt ggccgcacca agctggcgga
     3601 ggccttgctg gccgcctatt ggtggccgga cctacgggcc caggtagcgc tggaggtggc
     3661 taggtgccct gcctgccaac cagagcacgt cggcggcgag aggtccacgg agctgccccc
     3721 agctccagca gatcgcccga gtgccccctt ccagggatgg tcggtagacc tggcggggcc
     3781 cttccccccc gacgccgacg gcaaccgcta ccttgcggtg gccgtcgacg tcttcacgaa
     3841 gtgggtagag gctgacgcca tacccaacaa gcgggctttc accacggcat catggttcta
     3901 cgatgccgtg gtgtgccgct gggggcggcc cctgttcgtc cggctcgacc acgggactga
     3961 gtgggaggcc gagttccggg cccagctccg ccggctgcac attgcagtcc ggcaggggac
     4021 cgtgggcaac agtcgggcga atgggtaagt ggagcggacg attcggacta tcaagtccgt
     4081 catccgccgc tacctggggc ggcagccagc gctccactgg agcgacatag tcccatacgc
     4141 gcttgtggcg ctgcggatga cccccgcggc gtcgcatggc ctccccccat tcaccatcat
     4201 cacgggggga gtgcccatcc tcccatctca gctcccggag ggtgctgagg acgtcccagc
     4261 cgcggacgcc accccccagc aggaagctgc gtacctggag agcatggtcc agcgggtgga
     4321 gaccatccgc acccacaccg cggctcagct tacccgccag gacaagcggc tgcaggccgc
     4381 ccaccgccgg cgagatgcca gcgcgatcgc cccggctacc atgttcctct tcaagccggg
     4441 ggatctggtc ctgcagcgga ccaaggcttg ggcgcgcggc agccggctag tcgcgaaggg
     4501 gcaggggccc taccgcgtcc tgtaggtccg cggcctctgc gggcagcggg ttctgttgga
     4561 gcccgcgagt ggccccgcct ccaggcgccg tgccgcccag cctcggtggg tacatgcggc
     4621 cctgctagtc ccctacaccg aggggtggac cccggcggag ctggtctggg acgatgagga
     4681 caacaccccg ggggggggac catctgccga ccctcctcgc gaggtggagg agcgaccgcg
     4741 gcggcgtcag gcccgccgcg gaggagctgc acgctgagcg gcgctgccgc gctacccccg
     4801 ggattcagtg gtacgttggg ggggtacccc gatgcctggc gactgccccc gcggcacgtc
     4861 cccaggagta ggggttaccc gcgggggaca ggtcaccagg gagcccggcg ggcgctatga
     4921 gcgccatcat cggcgccaag gatgacgccg cgagggggcc gcgtgaccct ggtgcgcgat
     4981 ctgcgcgacc attgccggag gctacggggg ggctgtctag gcccccgcga cacgtggcgg
     5041 acaaggtgcg gcatgtgccg cttgcaggag ggccgcgcga ctctgccgcg gacccacac
//
LOCUS       DATGWW010000484         3550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_35887, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000484 DATGWW010000000
VERSION     DATGWW010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3550
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35887"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..634
                     /locus_tag="VK150_07025"
     CDS             <1..634
                     /locus_tag="VK150_07025"
                     /inference="COORDINATES: protein motif:HMM:NF019268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HLP31097.1"
                     /translation="PTGSLNVISNNYVLGADTLGNQKRTRRHTDNSIQWKYYDQPESF
                     LGKMAATFTFDLGDEQGGGVSRSGTAAEPKQYFAGWMLYNRFWFASDRHAITIGGGAI
                     TNPGRYLVLMPPINGATAASGTPYFTANPGDPFHAWDCSVTYDYMPSQYITFRGEFNR
                     RGASVPYFAGENGITPPGGNQGPLGSAVAGWAPDLRKTESRLNLALLVKL"
     gene            843..935
                     /locus_tag="VK150_07030"
     CDS             843..935
                     /locus_tag="VK150_07030"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0043462 - regulation of ATP-dependent
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit F"
                     /protein_id="HLP31098.1"
                     /translation="MTPALFIAALLALGLLAYLAFALLSPESFQ"
     gene            932..2629
                     /gene="kdpA"
                     /locus_tag="VK150_07035"
     CDS             932..2629
                     /gene="kdpA"
                     /locus_tag="VK150_07035"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HLP31099.1"
                     /translation="MSHAWIQNLAFLAVLLALAFPLGAYMAKVLEGEWTFLHPVLGPV
                     ERGLYRLMGVRSQEDMGWKAYAWSITLIKLVGLGAVFLLMKTQAALPLNPEGMGNVAT
                     DLSINTAVSFITNTNWQAYSGESTLSYLTQMLGLAVQNFLSAATGIAVLTAFVRGLTR
                     RSTAGLGNAWVDLIRSTLYILLPLSFVFALFLVSQGVIQNFSAYVRTSGGQVLAMGPA
                     ASQIAIKMLGTNGGGFFGVNGAHPFENSTPLSNFAQALSLLLIPAGLCASFGRMVKDR
                     RQGWALLAAMGAIFVLALTVCTQAELRGNPRLSNAAATQAATLSQAAGNMEGKEVRFG
                     AGGSALWATATTAASNGSVNAMLDSFTPLGGLVPMLLMQLGEVVFGGVGSGLYGMLMF
                     VLVGVFISGLMVGRTPEYLGKKVEAFDMKMASLAILLPCAAVLIGSAVTVLTPAATAS
                     VSNPGPHGFSQILYAWSSAANNNGSSFGGLAANTPFYNYGLATAMLLGRFGVIWPVMA
                     MAGSLVQKKHTPEGLGTLPTHTPLFVGVLIGVVLLVGALTFIPALALGPIAEHLSMH"
     gene            2798..>3550
                     /locus_tag="VK150_07040"
     CDS             2798..>3550
                     /locus_tag="VK150_07040"
                     /inference="COORDINATES: protein motif:HMM:NF012350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31100.1"
                     /translation="MVVSHTRQAIQARPLFESRIVRRAAVDALRKLNPLHQLRNPVMF
                     TVWVCSAFTTGLWIQALGGHGEGRPTFILAISLWLWFTLLFANFAEAMAEGRGKAQAD
                     ALRNSKKDVKARRLLGRERTGPSETVGATVLRIDDLVLVEAGDTIPGDGEVVEGVATV
                     NESAITGESAPVIRESGGDRSAVTGGTLVLSDWLLIRISSNPGESFLDRMIAMVEGAK
                     RQKTPNEIALDILLAGLTIIFLLATATLLPYSI"
BASE COUNT          549 a         1238 c         1089 g          674 t
ORIGIN      
        1 ccccacgggc agtctgaatg tcatctcgaa caactatgtt ctgggcgcag acacgctggg
       61 caaccagaag cgcacccgcc gccacacaga caacagcatc cagtggaagt actacgacca
      121 gcccgagtcc ttccttggca agatggccgc aaccttcacg ttcgatctgg gcgacgagca
      181 gggcggcggg gtgagccggt cggggaccgc cgccgagccc aagcagtact tcgccggttg
      241 gatgctctac aaccggttct ggttcgccag cgaccggcac gccatcacca tcggcggcgg
      301 cgccatcacg aaccccggcc ggtaccttgt cctgatgcct ccgatcaatg gggccaccgc
      361 ggcctcagga accccctact tcacggccaa cccgggcgac cccttccacg cgtgggactg
      421 ctcggtgacc tatgactaca tgcccagcca atacatcacc tttcgcggtg agttcaaccg
      481 gcggggcgcc agcgtgccct atttcgccgg cgaaaacggc atcacgcctc cgggcggtaa
      541 ccagggccct ctgggctccg cggtggccgg ctgggcccct gatctccgca agaccgaaag
      601 ccgcctcaac ctggccctcc ttgtgaagct ctgaccttgg gtccttccca tgcgcctgct
      661 catgccgtgg ttccttcctc tcgctgcctt catggggtgg ttggggaccc ggatggcgcg
      721 ggaggtcggc cgccacgact cgaagcggac aggagaggcc gccttggcct tggcggtcat
      781 gtggttcccc ctgatggcct ggatccttgc gcaattcttc ggcgactagc cctggagcaa
      841 ccatgacacc tgccctgttc atcgccgccc tgctggcgct cggcctgctg gcttacctcg
      901 ccttcgccct cctcagcccg gagtccttcc aatgagccat gcctggatcc agaaccttgc
      961 cttcctggcc gtccttctcg ctttggcttt cccgctgggt gcctacatgg cgaaagtcct
     1021 ggagggggag tggactttcc tgcatcccgt actgggccca gtggaacggg gcctgtatcg
     1081 cctcatgggc gtccgatccc aggaggacat ggggtggaag gcctacgcct ggtccatcac
     1141 gctcatcaag ctggttggac tgggcgccgt gttcctgctg atgaaaaccc aggccgccct
     1201 gcccttgaac cctgaaggga tgggcaacgt ggccaccgac ctgtccatca acacggcggt
     1261 gagcttcatc accaacacca attggcaggc ctattccggc gagagcaccc tcagctacct
     1321 cacccagatg ctgggtctcg cggtccagaa cttcctttcc gccgccacgg gcatcgccgt
     1381 gctgacggcg ttcgtccggg ggctcacgcg gcggagcacc gcgggactgg gcaacgcctg
     1441 ggtggatctg atccgaagca ccctctacat cctgttgcct ctttcgttcg tgtttgccct
     1501 gttcctggtg tcccaaggcg tcatccagaa tttcagcgcc tacgtccgca ccagcggcgg
     1561 gcaggtgttg gccatgggcc ccgccgcgtc gcagatcgcc atcaagatgc tgggaaccaa
     1621 cggcggcggt ttcttcggcg tgaacggcgc gcaccccttc gagaacagca cgcccttgtc
     1681 gaatttcgcc caggccttga gtctcctgct gattcccgcc ggactgtgcg cctccttcgg
     1741 acgcatggtc aaggaccgcc gccagggctg ggccctcctc gccgccatgg gcgccatctt
     1801 cgttctggcc ctgactgtgt gcacccaggc agagctgcgg ggcaatccgc gcctgtcgaa
     1861 tgcggccgcc actcaggcag ccaccctgtc ccaggccgcc ggcaatatgg aggggaagga
     1921 ggtccgcttc ggcgcgggcg gttccgccct gtgggccacc gccaccaccg ccgcgtcgaa
     1981 cgggtccgtg aacgccatgc tcgattcctt cacgcccctg ggaggcctcg tgcccatgct
     2041 gctcatgcag ctcggcgagg tggtgttcgg aggcgtcggt tcgggcctgt acggcatgtt
     2101 gatgttcgtc ctggtgggcg tcttcatcag cggactcatg gtgggccgga caccggagta
     2161 cctcgggaaa aaggtggagg ccttcgacat gaagatggct tccctcgcca ttctcctccc
     2221 ctgcgccgcg gtgttgatcg gctccgccgt caccgtgctg acgcctgcgg ccaccgcttc
     2281 cgtcagcaac ccggggcccc atgggttcag ccagatcctc tacgcctgga gcagcgccgc
     2341 caacaacaac ggaagctcct tcggcggact ggcagccaat acccccttct acaactacgg
     2401 gctcgccacc gccatgctcc tgggccgctt cggcgtcatc tggcccgtca tggcgatggc
     2461 cgggtccctc gtccagaaga agcacacgcc cgagggcctc ggcacccttc ccacgcacac
     2521 acctctgttt gtcggggtgc tgatcggagt cgtgctgctg gtgggcgcct tgaccttcat
     2581 cccagccctg gcgctcggcc ccatcgccga gcacctgtcg atgcattgag gcgcgccgtg
     2641 gttggttcac gcccccactc ggactccgct ggcgaacggc ctgccgccgt tccgcggaac
     2701 ccctggttcc agttgcttct tgtcatgttg atcgcgcctc tcctgctcac gctcggcatg
     2761 tccctgtccc gataatcgac ccctcttgaa ggaggccatg gtggtttccc atacccggca
     2821 agcgatccag gcccgccccc tgtttgaatc ccgcatcgtg cggcgcgcgg cggtcgatgc
     2881 gctccggaag ctcaatccgc tccatcaact ccgcaatccg gtcatgttca ccgtgtgggt
     2941 gtgcagcgcc ttcaccacgg ggctgtggat ccaggccctg ggcggccatg gcgaaggacg
     3001 gccgacgttc atcctggcca tctcgctgtg gctctggttc accctgctct tcgccaactt
     3061 tgccgaggcc atggcggaag gccggggcaa ggcccaggcg gatgccttga ggaattcgaa
     3121 gaaggatgtg aaggcgcgcc gcctgctcgg acgggaacgg acggggccct cggagaccgt
     3181 cggcgccaca gtcttgcgca tcgatgatct ggtgctcgtg gaggccggcg acaccatccc
     3241 gggagatggg gaggtcgtgg agggcgtcgc gacggtcaac gaaagcgcga tcacggggga
     3301 gagcgcgcct gtgatccggg agagcggtgg ggaccgctcc gccgtcacgg ggggtaccct
     3361 cgtgctttcg gactggctgc tcatccggat ttcctcaaat cctggcgaga gtttcctcga
     3421 ccgcatgatc gccatggtgg aaggcgccaa gcgtcagaag acgcccaacg agatcgccct
     3481 ggacatcctt ctcgcggggc tcacgatcat cttcctgctg gccacggcca ccctgctgcc
     3541 gtactcgatc
//
LOCUS       DATGWW010000485         3130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_310129, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000485 DATGWW010000000
VERSION     DATGWW010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3130
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310129"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..175)
                     /locus_tag="VK150_07045"
     tRNA            complement(86..175)
                     /locus_tag="VK150_07045"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(139..141),aa:Ser,seq:tga)
     gene            259..351
                     /locus_tag="VK150_07050"
     tRNA            259..351
                     /locus_tag="VK150_07050"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:293..295,aa:Ser,seq:gct)
     gene            614..1072
                     /locus_tag="VK150_07055"
     CDS             614..1072
                     /locus_tag="VK150_07055"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HLP31101.1"
                     /translation="MKVVLHTPSGDIGDISDWVARFSEGWAAGNRCTDQLVNLLGPDV
                     RLVAPGLRSTRGRVAALSAFRKTFEVLPDLTAQVHRWSATGEALFLEMTFRATIGGRV
                     LEWHSVDRVLFHDGVAVERVAYFNPLKVRRAFLRSPAGWLQLIRRKLKGL"
     gene            complement(1089..2405)
                     /locus_tag="VK150_07060"
     CDS             complement(1089..2405)
                     /locus_tag="VK150_07060"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP31102.1"
                     /translation="MKPLAHDRQLQGLSLMAGGPALLLAGGLLAIAPWPWPLRAALAA
                     SAAAVWWRMSARLQERALRPWQTLANLLAALREGDYSFRARDTGGGDALHQAMAELNN
                     LAEQFQQQRLGARDASALLRTVMAEMDMALFAFDAGGRLCLLNRAGEAFLARPRERAL
                     GESAGTLGLEEALAGPADSAAAMTFSGHTGRWEVRRSLFRQAGQPHRLLVLSDLTRPL
                     REEERQAWQRIIRVLSHEINNSLAPIHSLAGSLGTLLHQEPPPADLKEDLVLGLGIIA
                     GRSEALKRFLDAYAKLAKLPPPQRRPLEVGPWIRRAVELENRQPVRLEPGPDLTLVAD
                     GDQLDQVLINLLRNAVEAAQQTGGAVTLRWQAHPSWLEVEVLDEGPGLANPANLFVPF
                     FTTKPDGSGIGLALSRQIAEAHGGTLTLANRADRQGAKATLGLPRQ"
     gene            complement(2402..>3130)
                     /locus_tag="VK150_07065"
     CDS             complement(2402..>3130)
                     /locus_tag="VK150_07065"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HLP31103.1"
                     /translation="GLAEGVLESELFGHVKGAFTDAKSPRAGRFELADGGTLFLDEIA
                     NAPLSLQARLLRVLETGEFERVGSSTTLKTDVRLLAATNADLAAEVQTGRFRQDLRFR
                     INTIELHLPPLRERREDVGPLATAFLARHAQRYRKPPRRLDEAALRALEQHRWPGNVR
                     ELDHAMERAVLLGSSDHIRPSDLMLDRPQASLDTGDLSLEDMEGLLVRKALARFGTAS
                     AAAEALGLSRSAMYRRLQKLGISG"
BASE COUNT          484 a         1024 c         1128 g          494 t
ORIGIN      
        1 tggacatcac ggcaggcatg ttaccaacgg ctcctgcctt ccctccccgt cttggcaaga
       61 aaagccgccc gaaggcggct tcatctggcg gagggagcga gattcgaact cgcggtgagc
      121 tcacacccac gacggttttc aagaccgttg ccttaaaccg ctcggccatc cctccctgcc
      181 tccatcttga aggctgggcg cgggtctggg caagaagcct tgtgcgggcg ggggtccaac
      241 ggtaatctgg tggaccttgg agagatgccg gagtggccga tcgggctcgc ctgctaagcg
      301 agtgtattgg gtaaaccagt accgggggtt cgaatccccc tctctccgcc accacgccgc
      361 cccgcgaccg cggggcggct tcgcgtaggg cggcgcggct tcgctcacgg cattcgcggg
      421 cgggatgcgc ccctggccgg tgccgcggcg ggaaggacac acgttgtcag gcatccgagg
      481 ccctcgactc cagttctgcc cctgattcgg aaaacctcgt ccctcagggc cggggagtgg
      541 cgacagaaga ggtgtctcct gagcacaggt tccaaccatt cagggctggc ataggcggga
      601 ggagtccaat cccatgaagg tcgtgctcca caccccctcg ggcgacatcg gcgatatctc
      661 ggactgggtc gcgcggttca gcgaaggctg ggctgcgggc aaccgctgca ccgatcaact
      721 ggtgaacctg ctgggcccgg acgtgcggct ggtggcgccg gggctgcgtt ccacccgggg
      781 gcgggtggcc gccctgtcag ccttccggaa gaccttcgag gtgctgccgg acctgactgc
      841 ccaggtgcac cgttggagcg ccacgggaga ggcgctcttc ctggagatga ccttccgggc
      901 caccatcggg ggccgtgtcc tggaatggca ttccgtggac cgcgtgctct tccatgacgg
      961 ggtggccgtg gagcgcgtcg cctacttcaa cccgctcaag gtgcggcgtg ccttcctccg
     1021 gagccctgcg ggctggctgc agctcatccg ccggaagctg aagggcctgt aggccgaaac
     1081 gggcggggtc attgccgagg caggcccagg gtggccttgg ctccctggcg gtcggcgcgg
     1141 ttcgcgaggg tgagcgttcc accatgggcc tcggcgatct ggcggctcag cgccaggccg
     1201 atgccagacc cgtccggttt cgtggtgaag aagggcacaa acaggttggc cgggtttgcc
     1261 aggcccggtc cctcgtccag cacctcgacc tccagccagg aaggatgagc ctgccagcga
     1321 agggtgaccg ccccgccagt ttgctgtgcg gcctccaccg cattgcgaag caggttgatg
     1381 agcacctggt ccagctggtc gccatcggcc acgagggtca gatccggacc gggctccagg
     1441 cgcaccggct gacggttctc cagctccacc gcccgccgga tccaggggcc gacttccagg
     1501 ggtcgccgct ggggaggcgg cagcttcgcc agcttggcgt aggcgtccag gaagcgcttc
     1561 agtgcctcgc tccggccagc gatgatgccg aggcccagga ccaagtcctc cttcaggtcc
     1621 gcagggggag gttcctggtg gagcagggtg ccgaggcttc cggccaggct atggatgggc
     1681 gccagtgaat tgttgatctc gtggctgagc actcggatga tgcgctgcca ggcctggcgc
     1741 tcctcctcgc ggaggggccg cgtcagatca gagagcacca gcaggcggtg tggctggcct
     1801 gcctggcgga acaagctccg ccgcacctcc caacggcccg tgtggccaga gaaggtcatg
     1861 gccgccgcgc tgtcggcggg cccggccaag gcctcctcca gccccaacgt cccggcggac
     1921 tcgcccaggg cgcgctccct gggccgggca aggaaagcct ctccggcccg gttcaggaga
     1981 cagaggcggc cccctgcatc gaaggcaaac agggccatgt ccatctcggc catgacggtc
     2041 cgaagcaggg ccgaggcgtc acgggcgccg aggcgctgct gctggaactg ctcggccaga
     2101 ttgttcagtt cggccatggc ctggtggagg gcatcccctc ccccggtgtc gcgggcccgg
     2161 aaggaatagt ccccttcgcg cagtgccgcg agcaggttgg cgagggtctg ccaagggcga
     2221 agggcccgct cctgcagccg ggcagacatc cgccaccaga ccgcagccgc gctcgcggcc
     2281 agggcggccc ggaggggcca gggccacggg gcgatggcaa gaaggccgcc ggcgaggagg
     2341 agggccgggc cgcctgccat cagcgagagc ccctggagct ggcggtcgtg ggcaagcggc
     2401 ttcatccgct gatcccgagt ttctgaaggc ggcgatacat ggcgctgcgg ctgaggccga
     2461 gggcctcggc ggcggccgag gccgtgccaa agcgggcgag ggccttgcgg accaggagac
     2521 cttccatgtc ctcgaggctc aggtctccgg tgtccaggga tgcctgcggc ctgtcgagca
     2581 tgaggtcgga gggacggatg tggtcggagg atcccagcag gaccgcgcgt tccatggcgt
     2641 ggtcgagttc ccggacattg cccggccagc gatgctgctc cagagcgcgc agggcggcct
     2701 cgtcgaggcg acgcgggggt ttccggtacc gctgggcgtg ccgcgccaag aaggccgtag
     2761 ccagcggccc cacatcctcc cgccgctcac gcaagggcgg aaggtgcagt tcgatggtat
     2821 tgatcctgaa acggaggtcc tggcggaacc gcccggtttg cacttccgcg gcaaggtcgg
     2881 cattggtggc ggccagcagg cgcacatcag tcttcagggt ggtcgaggat cccacccgct
     2941 cgaactcccc cgtttcgagg acgcgcagca ggcgggcctg gagggagagg ggggcgttgg
     3001 cgatctcgtc gaggaagagg gttcctccat cggccagttc gaaacggcca gcccggggcg
     3061 atttcgcatc ggtgaaggcg cccttcacgt ggccgaagag ttcgctttcc agaacgcctt
     3121 cagccaggcc
//
LOCUS       DATGWW010000486         1851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_153772, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000486 DATGWW010000000
VERSION     DATGWW010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153772"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            77..940
                     /locus_tag="VK150_07070"
     CDS             77..940
                     /locus_tag="VK150_07070"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HLP31104.1"
                     /translation="MPKDTRILITSGAYAPIRAQLAEAGFSSGVRIFDTSALRNGLFD
                     RDLLVRAAPTLERLHAMLGDAFSRKVLEGVIAYRLTADITHVEVVCEPLQYFPDGVVK
                     LGPKEVFIDGGAFDGDTVRTFLAACGGAFETIHAFEPDPRNAARLRDWIAGHPDRARI
                     HAHAEALYSHSTELRFEEGPSMSSHIDAVGGTCIQATSLDACLQGAPATFIKFDLEGA
                     ERAALKGAEATIRTWRPKLAISAYHLADDLWELPAMIAELTPGYRYFLRHYSFLSFET
                     VFYAIPEEQCP"
     gene            984..>1851
                     /locus_tag="VK150_07075"
     CDS             984..>1851
                     /locus_tag="VK150_07075"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HLP31105.1"
                     /translation="MPRKPLVTIAIPNYNYAKYVGQAIESAVNQTYENLEVVVSDNAS
                     TDGSWDIIKAFEDHPKVELFRQKETLPVGNHFGFVLAMANARYVVFLSSDDMLKPTFI
                     EKTMKVILDHPDRSIGMVVTEREVINAEGAVRDFPPFYTTSCVVPGEKQAKVFLMGNP
                     FVPSQSLLDRKVLQPGLRSFRRQDPDQDWRRRTQYACLADCAMWFNLCLASDFGYVRE
                     KLAVYREHFQGEAAAHMGNLQGIFELYTMKRNLIEDARRKGLDTIVAFGEEAIRKIGS
                     DCLKWASMFLEHR"
BASE COUNT          311 a          680 c          552 g          308 t
ORIGIN      
        1 cctggacaac taggcctcca agtggggacg aaccctgggc ggtcttcccg tctgcggccc
       61 ggacctgctc gacaccttgc ccaaagacac ccggatcctc atcacctccg gggcctatgc
      121 gcccattcgg gcccagttgg cggaagcggg tttctcctcc ggcgtgcgca ttttcgacac
      181 gtccgccctg cgcaacgggc tcttcgaccg ggacctcctc gtgcgagccg cgcccaccct
      241 cgagcggctc cacgccatgc tgggcgacgc tttctcccgg aaggtcctgg aaggcgtgat
      301 cgcctaccgc ctcaccgccg acatcaccca tgtggaagtg gtgtgcgagc ccctccagta
      361 ctttcccgat ggcgtggtga agctgggccc gaaggaggtg ttcatcgacg gcggcgcctt
      421 cgatggcgac accgtccgga ccttcctcgc ggcctgcggc ggcgccttcg agaccatcca
      481 cgccttcgag cccgaccccc gaaacgccgc ccggctgcgg gactggatcg cgggtcatcc
      541 cgaccgggcc cggatccacg cccatgccga ggcgctgtac agccactcga ccgaactccg
      601 gttcgaagag gggccctcca tgagcagcca catcgatgcc gttggcggaa cctgcatcca
      661 ggcgacgagc ctggatgcct gccttcaggg cgcgccggcc accttcatca aattcgatct
      721 ggagggcgcc gagcgcgcgg cgctgaaggg cgccgaggcc accatccgca cctggcgtcc
      781 gaagctggcg atctccgcct accacctcgc ggacgacctc tgggaactgc ccgcgatgat
      841 cgcggagctg acgcccggct accggtattt cctccgccac tactccttcc tcagcttcga
      901 gacggtgttc tacgccattc ccgaagagca gtgcccctag cagctcctcc cccgcgcctc
      961 cgcccccgac gccaggattc cccatgcccc gcaagccgct ggtgaccatc gccatcccca
     1021 actacaacta cgcgaagtac gtgggccagg ccatcgagag cgccgtcaac cagacctacg
     1081 agaacctcga ggtggtggtc tccgacaatg cgtccacgga cggctcctgg gacatcatca
     1141 aggccttcga ggaccacccg aaggtcgagc tgttccgcca gaaggagacg ctccccgtgg
     1201 gcaaccattt cggcttcgtg ctggcgatgg cgaacgcccg gtacgtggtc ttcctctcct
     1261 ccgatgacat gctcaagccg acgttcatcg agaagaccat gaaggtcatc ctcgaccatc
     1321 cggaccgcag catcgggatg gtggtcaccg agcgcgaggt catcaacgcg gagggcgccg
     1381 tccgcgactt cccgcccttc tacaccacca gttgcgtggt gcccggcgag aagcaggcga
     1441 aggtgttcct gatgggcaac cccttcgtgc cctcccagtc gctgctggac cggaaggtgc
     1501 tgcagcccgg gctccggagc ttccggcgcc aggatcctga ccaggattgg cgccgccgca
     1561 cccagtacgc ctgcctcgcc gactgcgcca tgtggttcaa cctgtgcctc gcttcggatt
     1621 tcggctacgt ccgcgagaag ctcgccgtgt accgcgagca tttccagggc gaggctgccg
     1681 cgcacatggg caacctccag gggatcttcg agctctacac catgaagcgg aacctcatcg
     1741 aggacgcgcg ccggaagggc ctcgacacca tcgtcgcctt cggcgaggag gccatccgca
     1801 agatcggctc cgactgcctg aagtgggcct cgatgttcct cgagcaccgc g
//
LOCUS       DATGWW010000487         3677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_446139, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000487 DATGWW010000000
VERSION     DATGWW010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3677
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446139"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VK150_07080"
     CDS             <1..255
                     /locus_tag="VK150_07080"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RCC1 domain-containing protein"
                     /protein_id="HLP31106.1"
                     /translation="PQALTGLKALGLSAGSMSTYAVLPDLTVKAWGYNNNGRLGDGTA
                     TDRPAPTTVPNLFLGPIPTGVTPPAPAVPEGAQARGVFRF"
     gene            complement(263..2872)
                     /locus_tag="VK150_07085"
     CDS             complement(263..2872)
                     /locus_tag="VK150_07085"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF004349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HLP31107.1"
                     /translation="MREMDKAFDFRTAQTRWYSVWEDSKAFEAAPKSGKAPWSIVIPP
                     PNITGNLHMGHALVNTLHDVLTRFKRAQGFDALWVPGTDHAGIATQMMVERQLKAEGT
                     DRHKLGRDAFEQRIWDWKEKNQGAIEHQLKRLGCSVDWTRNRFTLDPALNKAVRKVFV
                     ESYKAGRIYRGPRMIQWDPALQTALSDLEVKYEERKGKLWYLRYPLADGSGDVMVATT
                     RPETMLGDTAVAVHPDDERYQAMIGKLMNHPLTGRQIPVVADSFVDPAFGTGCVKVTP
                     AHDANDFAAGQRLGLPSITIIGFDAKMTAEAGAYAGLDRFEARKRVVADLEEQGFLVK
                     VEDYVNKISLSDRSGAVLEPLVSEQWFMDVKEAAAKALEAVNSGAIQFTPEHHAAVWN
                     HWLTNIQDWCISRQLVWGHRIPAWTCDACGQLHVELEAPAACSCGSTKLTQDPDTLDT
                     WFSSALWPFSVFGWPDETEDLKRYYPTSVLITGYDILFFWVARMAMAGLTWMGDVPFH
                     KVYFNSLVRDASGQKMSKTKGNVIDPLEVMEEYGTDALRFSLAIMAAPGTDIAMSTAR
                     LEASRNFCNKLWNASRFVQMNLDESITLATAPEFGEAEFWMIGRMRDSLTAVTRALEE
                     FRFHEASDLLYHLVWDDFCATYIELAKVQLQSGTKAQKAAILHFLDILLRALHPFVPF
                     LTEEIHEAMMDGRLPEGEPTLLAQRSWPADEPLLRTQGGDATLIPRFQEVLSAFLRLK
                     AEQGVDPAKRVPAFCSLMELEPFAEALKSIARLESVAFAKGDLAAPTRAVAVVGGGTL
                     ALELAGLKDPAAEKAKLEKELAKLEKELEPLRARLADDSFVTKAPEAAVAKLLSQAEE
                     KEQRLQQVKALLQ"
     gene            3069..>3677
                     /locus_tag="VK150_07090"
     CDS             3069..>3677
                     /locus_tag="VK150_07090"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLP31108.1"
                     /translation="MATGSAPHPSLSLLTEGAARLALGTMRLLDWGLEARALAVHLRR
                     VADAGVRVLDTADIYGGGAVEPALGRAFREDPALRRSFRIVGKCGIRLRAAGPDPVTV
                     KHYDTSRAHVTAQVERSLGHLGVERLDLLLIHRPDPLMDAAELAHTAASLLADGKIAA
                     FGVSNFAPAQADLLQSRLATPLAANQIEASLWHPAPLLDGTLD"
BASE COUNT          521 a         1240 c         1290 g          626 t
ORIGIN      
        1 ccccaggcgc tgaccgggct caaggccctg gggctcagcg cgggctccat gtctacctac
       61 gcggtgttgc ccgatctcac cgtgaaggcc tggggctaca acaacaacgg ccgcctgggc
      121 gacggcaccg ccaccgaccg cccggcgccc acgacggtgc ccaacctctt cctgggcccc
      181 atccccacgg gcgtcacgcc accggcaccg gcggtccctg agggcgcgca ggcgaggggg
      241 gtgttccggt tctgagcctc ggttactgaa gcagcgcctt cacctgctgg aggcgctgct
      301 ctttttcctc ggcctggctg aggagcttgg ccacggcggc ctcgggggcc ttggtgacga
      361 agctgtcgtc ggcgaggcgc gcgcgcagcg gctccagttc cttttcgagc ttggccagtt
      421 ccttttcgag cttggccttc tcggcggccg gatccttgag gcccgccagt tccagggcca
      481 gcgtgccgcc gcccaccacg gccacggccc gggtcggcgc ggccaggtcg cccttggcga
      541 aggcgaccga ttccagccgg gcgatggatt tcagggcctc ggcgaagggc tccagttcca
      601 tcagcgaaca gaacgccggc acgcgcttgg cgggatccac gccctgctcg gccttgaggc
      661 gcaggaaggc cgaaagcact tcctggaaac gggggatgag ggtggcgtcg ccgccctggg
      721 tccgcagcag gggctcgtcc gcgggccagg accgctgggc cagcaaggtg ggttcacctt
      781 cgggcaggcg gccgtccatc atggcctcgt ggatctcctc ggtgaggaag ggcacgaagg
      841 gatgcagggc gcggagcagg atgtcgagga agtgcaggat ggcggccttc tgggccttcg
      901 tcccgctctg cagctgcacc ttggccagct cgatgtaggt ggcgcagaag tcatcccaga
      961 ccaggtggta gagcaggtcc gaggcctcgt ggaagcggaa ctcctcgagg gccctggtaa
     1021 ccgccgtcag gctgtcgcgc atgcggccga tcatccagaa ctcggcttca ccgaattctg
     1081 gtgccgtcgc cagcgtgatg gattcatcca ggttcatctg gacaaaccgt gacgcgttcc
     1141 agagcttgtt gcagaaattc cgggaggcct ccagccgcgc ggtgctcatg gcgatgtcgg
     1201 tgcccggcgc ggccatgatg gccagggaga agcgcagggc gtcggtgccg tactcttcca
     1261 tcacttccag gggatcgatg acattgccct tggtcttgct catcttctgg ccgctggcgt
     1321 cgcgcaccag gctgttgaag tagaccttgt ggaagggcac gtcgcccatc caggtgaggc
     1381 cggccatggc catgcgcgcc acccagaaga agaggatgtc gtagccggtg atgagcacgc
     1441 tggtggggta gtagcgcttc agatcctcgg tttcgtcggg ccagccgaag acactgaagg
     1501 gccagagcgc cgaggagaac caggtgtcga gcgtgtcggg atcctgggtg agtttcgtcg
     1561 atccgcagct acaggccgcg ggggcctcca gctccacgtg cagctggccg caggcgtcgc
     1621 aggtccaggc cgggatgcgg tggccccaga ccagctggcg gctgatgcac cagtcctgga
     1681 tgttggtgag ccagtggttc cacacggcgg cgtggtgctc gggcgtgaac tggatggcgc
     1741 cggagttcac ggcctccagg gccttggcgg cggcttcctt cacgtccatg aaccactgct
     1801 cgctcaccag cggttccagc acggcgccgc tgcggtcgct caaggaaatc ttgttgacgt
     1861 agtcctcgac cttcaccagg aagccctgct cctccaggtc ggccaccacg cgcttgcggg
     1921 cctcgaagcg gtccagcccg gcgtaggccc ccgcttcggc ggtcatcttc gcatcgaagc
     1981 cgatgatggt gatggagggc agccccagcc gctggccggc ggcgaagtcg ttggcgtcat
     2041 gggccggggt caccttcacg cacccggtgc cgaaggcggg atccacgaag ctgtcggcca
     2101 ccacggggat ctggcggccc gtgagggggt ggttcatgag cttgccgatc atggcctggt
     2161 agcgctcgtc gtcgggatgc acggccaccg ccgtgtcgcc cagcatcgtc tcggggcggg
     2221 tggtggccac catgacatcg ccgctgccgt cggccagggg gtagcgcagg taccagagct
     2281 tgcccttgcg ctcctcgtat ttcacttcca ggtcgctcag cgcggtctgc agcgcggggt
     2341 cccactggat catgcggggg ccgcggtaga tgcggccggc cttgtagctc tcgacgaaga
     2401 ccttgcgcac ggccttgttc agcgccgggt ccagggtgaa gcggttgcgg gtccagtcca
     2461 cggagcagcc caggcgcttc agttggtgct cgatggcgcc ctggttcttc tccttccagt
     2521 cccagatgcg ctgttcaaac gcgtcgcgtc ccagcttgtg gcgatcggtg ccctcggcct
     2581 tcagctggcg ctccaccatc atctgcgtgg cgatgcccgc gtgatcggtg ccgggcaccc
     2641 acagggcgtc aaacccttgg gcccgcttga agcgggtgag cacgtcgtgc agcgtgttca
     2701 ccagggcgtg gcccatgtgg aggttgcccg tgatgttggg cggggggatg acgatggacc
     2761 agggcgcctt gccgctcttg ggcgcggcct cgaaggcctt ggagtcctcc cacaccgagt
     2821 accagcgggt ctgcgccgtc ctgaaatcga aagccttgtc catctcgcgc atggtcgtcc
     2881 ttgctgggcc ggtctggagg tccgttccac ccgcggccgg tcgcgccggc ccaggttgag
     2941 cacacgccaa gaggctggac ccgccaggca tctctcggcg ccgtaatggg tcagtgtacc
     3001 cgtgctgcgg ggccggatcc aacggcagct tgtggccgcc cgggcgggtt tcctgtcagc
     3061 atccaggcat ggcgaccggt tccgcgcccc atcccagcct gtccctgctg accgaggggg
     3121 ccgcccgcct ggccctcggg accatgcgcc tgctcgactg gggcctcgag gcccgggccc
     3181 tggcggtcca ccttcggcgg gtggccgacg cgggggtgcg ggtgctggac acggccgaca
     3241 tctacggcgg cggcgccgta gagccagccc tgggccgggc cttccgggag gaccccgcgt
     3301 tgcggcgcag cttccggatt gtgggcaaat gcgggatccg cctgcgcgcc gccggccccg
     3361 acccggtgac cgtgaagcac tacgacacga gccgcgccca cgtgacggcc caggtggagc
     3421 gcagcctggg acatctcggc gtcgagcggc tcgacctgct gctcatccac cgtcccgacc
     3481 cgctcatgga cgccgccgag ctggcgcaca cggccgcgag cctgctggcc gacggcaaaa
     3541 tcgccgcctt cggcgtctcg aacttcgcgc cggcccaggc ggacctgctg caatcgcgcc
     3601 tggccacgcc gctggccgcg aaccagatcg aggcctcgct gtggcacccg gcgccgctgc
     3661 tggacggcac cctggac
//
LOCUS       DATGWW010000488         2807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_261498, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000488 DATGWW010000000
VERSION     DATGWW010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261498"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..807)
                     /locus_tag="VK150_07095"
     CDS             complement(<1..807)
                     /locus_tag="VK150_07095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31109.1"
                     /translation="MGFWKAFRTASLVAAATWFTLAAPAPTAPAVPAPAAPQASEPLP
                     AIALSHRAQHLMAALVKGDADAVRAAQLEVEALRRNYSTLDVAPLVEAMSVWARQQGL
                     AGRASLGLEALQAVERWAPDHPTLLGTRITLMRQQGVQGWLWSVPELLRLTRLRLDHP
                     AHRWLWLIQHLGMIRLTATLLLWGWALTMGLRYRHVLRHLWEESLKRRGQSPAVSALI
                     GALILAGPVILGLDPIVAAILWLFLLAPFLLAPEVKVTVFLLILQVIHPAL"
     gene            complement(825..1112)
                     /locus_tag="VK150_07100"
     CDS             complement(825..1112)
                     /locus_tag="VK150_07100"
                     /inference="COORDINATES: protein motif:HMM:NF020473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1844 domain-containing protein"
                     /protein_id="HLP31110.1"
                     /translation="MNPAVPEASLTALMHLLAEQALLAMGVPHPMVKEAPPANPAVAR
                     FYVDLLDVLKTKTDGTRTDAETAQLDEILYQLRMRAMDLKPSAEAPGAPKP"
     gene            1299..2315
                     /locus_tag="VK150_07105"
     CDS             1299..2315
                     /locus_tag="VK150_07105"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HLP31111.1"
                     /translation="MRRLVPALMLPALCLSVQAEQTGRISGKVLNKEGKPIPGAKVNL
                     KRADRNWSKDLFPDKNGNFLQVGLEPKDFIMTVTAEGYVELKEQVKIPLADVIVKNIT
                     LLTPAEARTQAIAGGGQAPEDPGAALDAEGRDAFNQAIPFYNDGKYDEALPLVDKSYK
                     TLMDAKEKLKDEQAKAELAPEIVKVERVLGICLAQAGAKKEEAEPYLLKALERNPKDE
                     RVVIGLVEVAKAKGDKAAETKYTAQLEALQGPNPDVIYNKGVEAFNAGKSKEAKAQWL
                     KTLEIAPTYAEAHYMLAMVEFGENNLKGTKTHLEKYLEIAPTGKNAATAKEMLKDPSL
                     KKIK"
     gene            complement(2377..>2807)
                     /locus_tag="VK150_07110"
     CDS             complement(2377..>2807)
                     /locus_tag="VK150_07110"
                     /inference="COORDINATES: protein motif:HMM:TIGR00633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HLP31112.1"
                     /translation="SQGLVRLPFKRQFAKDLAAIVAKHHAAGDQVILTGDMNVAPEEI
                     DLARPKDNTKNPGFTPEEREDFKLYLGAGLVDVLRERNPDVPGLYTWWTARGGARERN
                     VGWRIDLFLASRPLLAQVKDAQIHADVLGSDHCPISLELK"
BASE COUNT          516 a          947 c          943 g          401 t
ORIGIN      
        1 cagggcgggg tgaatcacct ggaggatcag gaggaagacg gtgaccttca cctccggcgc
       61 cagcaggaaa ggggccagca ggaacagcca caggatcgcg gccacgatgg gatcgagccc
      121 caggatcact ggtccagcca ggatcaaggc gccgatcagc gccgagaccg ccggagactg
      181 cccgcgccgc ttgagcgact cctcccagag gtgccgcagg acgtggcgat agcgcaggcc
      241 catggtcagt gcccagcccc agagcagcag cgtcgccgtg aggcggatca tgcccaggtg
      301 ctggatcagc cagagccagc ggtgggccgg gtggtccagg cggaggcggg tcaggcggag
      361 cagctcgggc acgctccaca gccagccctg gacgccctgc tggcgcatga gggtgatgcg
      421 ggtgcccagg agggtcgggt ggtccggagc ccatcgctcc acagcctgga gcgcctccag
      481 cccgaggctg gcccttcccg ccaggccctg ctgccgcgcc cagacggaca tggcctccac
      541 gaggggggcc acatccaagg tggagtagtt gcgccggagc gcctccacct ccagctgggc
      601 tgcgcgcacg gcgtcggcgt cgcccttgac gagggccgcc atcaggtgct gggcgcggtg
      661 gctgagggcg atggcgggga gcggctccga cgcctgcggt gccgccgggg ccggcacggc
      721 cggtgccgtc ggcgccgggg cggccagcgt gaaccaggtc gccgcggcca ccagggatgc
      781 ggtccggaag gccttccaga atcccatgcc gttcctcctc gtgttcatgg cttcggggcc
      841 ccgggcgcct ccgcgctggg tttcagatcc atcgcccgca tgcggagctg gtacaggatc
      901 tcgtcgagct gggcggtctc ggcgtcggtg cgggttccgt ccgtcttggt cttcaggacg
      961 tccagcaggt ccacgtagaa ccgcgccacc gcagggttcg cggggggcgc ctccttcacc
     1021 atcgggtgcg ggacgcccat ggcgagcagc gcctgctcag cgaggaggtg catcagggcc
     1081 gtcaaggatg cttccggcac cgcagggttc atgggctacc tcaaacactt tcaggagttg
     1141 tctgcgggga agcctaccac agcccgaatt ttcctgcatc cagcccggat tcgcgcccct
     1201 ttcgacccac aagagaccag atgaggccgc cttttgacga aaagcactcg gcgccagggc
     1261 gaccctgtgg aacgatggat gggtttggag gaagccccat gcgtcgcctc gttcccgccc
     1321 tcatgctccc tgccctctgc ctctccgtcc aggcggaaca gacgggccgc atctccggca
     1381 aggtcctcaa caaagagggc aagcccatcc ccggcgccaa ggtcaacctc aagcgggccg
     1441 accgcaactg gagcaaggac ctcttccccg acaagaacgg gaacttcctg caggtcggcc
     1501 tggagcccaa ggacttcatc atgacggtca ccgccgaagg ctacgttgag ctgaaggagc
     1561 aggtcaaaat ccccctcgcc gatgtgatcg tgaagaacat caccctgctg acgcccgccg
     1621 aagcccggac ccaggccatc gccggcgggg gacaggctcc cgaggacccg ggcgcggccc
     1681 tcgatgccga aggccgggac gccttcaatc aggcgatccc cttctacaac gacggcaagt
     1741 acgacgaggc cctgcccctg gtggacaagt cctacaagac gctgatggac gcgaaggaga
     1801 agctgaagga cgagcaggcc aaggccgagc tggcccctga gatcgtgaag gtggagcgcg
     1861 tgctgggcat ctgcctcgcc caggccggcg ccaagaagga ggaggccgag ccctacctcc
     1921 tgaaggccct ggagcgcaat cccaaggacg agcgcgtggt gatcggcctg gtcgaagtcg
     1981 ccaaggccaa gggtgacaag gccgccgaga cgaagtacac ggcccagctc gaagccctgc
     2041 agggtcccaa ccccgacgtg atctacaaca agggcgtcga ggccttcaat gccggcaaat
     2101 ccaaggaggc caaggcccag tggctgaaga ccctggaaat cgcccccacc tacgccgagg
     2161 cccactacat gctggccatg gtcgagttcg gcgagaacaa cctgaagggc accaagacgc
     2221 acctggagaa gtacctggag atcgccccca ccgggaagaa cgccgccacc gccaaggaaa
     2281 tgctgaagga tccctcgctc aagaagatca agtagggttc caccctgaaa cagcaagggc
     2341 cccaatcggg gcccttgctg tttcgaggtg acctgcctac ttcagctcga ggctgatggg
     2401 gcagtgatcc gagcccagca catcggcgtg aatctgcgca tccttcacct gggccagcag
     2461 cggccggctg gcaaggaaga ggtcgattct ccagcccacg ttccgctccc gcgcgccgcc
     2521 ccgggccgtc caccaggtgt agaggccggg cacgtcgggg ttgcgctccc gcagcacgtc
     2581 caccaggccc gcgcccaggt agagcttgaa atcctcgcgc tcctcgggcg tgaagccagg
     2641 gttcttcgtg ttgtccttgg gccgggccag gtcgatctct tccggtgcca cgttcatgtc
     2701 gcccgtgagg atcacctggt cgcccgccgc atggtgcttc gccacgatgg cggcgaggtc
     2761 cttcgcgaac tgccgcttga agggcagccg cacgaggccc tgggagg
//
LOCUS       DATGWW010000489         1841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_84040, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000489 DATGWW010000000
VERSION     DATGWW010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84040"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            286..1764
                     /locus_tag="VK150_07115"
     CDS             286..1764
                     /locus_tag="VK150_07115"
                     /inference="COORDINATES: protein motif:HMM:NF019403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /protein_id="HLP31113.1"
                     /translation="MSLWNDLTPSKRCDWIDQLRGWAVIVMIEVRAVNVWLQSGLRPD
                     WLNYLNGLVAPSFTMAAGYSLVISTFRTDGTLRPFWPDTARRLGFILLCAYALHAPGI
                     TAADWTVLNTVQKARELFKIDVLQCIVFSLLILQGLARLVRNPKVFTWLALAIAVFVP
                     LVSPHLWATGVADGMWLPIRGLFNGLPDRGVQALFPLFPWIAFPAFGAFLGGLYRHYR
                     VEPVEGKARWSEARFLAGLTAVGALLLAWGSAAQQGWLWGGTWLQQNGVWMLHSRTGA
                     FTYGELGGIANTTLPSVAARAGWILLGGSLMGAVELVRPKWKGPNPIKAASAESLLLY
                     MLHLNLIFGVLLAPAVLAVTGWGWGTQGWTGTLLLTAVIIGLNLWAGVAWQRVRQTPE
                     RMHLLQRRAVAALGVWFVLGGWWTFRHFLQSPELAKEPYRFLNAARVRKGLPPTPDGL
                     SRDPEEYFREADRLKLRLGPAARADVARQILERRAQDPGESR"
BASE COUNT          254 a          642 c          595 g          350 t
ORIGIN      
        1 ggcgtgctga cctgcttgat gctgatgttc tccctgcccg tggcgaactg gtggcggctc
       61 atcgcctggc tcgccctcgg cttcctgatc tacttcgcct acggcaagaa gcacagcgtc
      121 atgcggcagc agaactcgta gggccgggtt catttcaacg accactcaag aattcaccac
      181 ccagacacca aggcaccaag aacggcaaaa gcagcctttt ctttcttggt ctcttggtgc
      241 cttggtggtg atcatttttc ttgatcccat ttttgaggcc ctcccatgtc cctctggaac
      301 gacctgaccc cgtcgaagcg ctgcgactgg attgaccagc tgcgcggctg ggccgtgatc
      361 gtgatgatcg aggtccgtgc ggtgaatgtg tggctgcagt ccggtctccg gcccgactgg
      421 ctgaactatc tcaacggcct ggtggcgccc agcttcacca tggccgcggg ctacagcctg
      481 gtgatctcca cgttcaggac cgatggcacc ctccgcccct tctggcccga cactgcgcgc
      541 cgcctgggct tcatcctgct ctgcgcctac gccctgcatg ccccgggcat cacagccgcg
      601 gattggacgg tcctcaacac cgtgcagaag gcccgggagc tcttcaagat cgacgtgctg
      661 cagtgcatcg tcttctcgct gctgatcctc cagggactcg cccggctggt gcggaatccg
      721 aaggtcttca cctggctcgc gctggcgatc gcggtgttcg tgcccctggt gtcacctcac
      781 ctctgggcca ccggcgtggc cgacggcatg tggctgccca tccgcggcct cttcaatggc
      841 ttgccggatc gcggcgtgca ggccctcttc cccctcttcc catggatcgc cttcccggcc
      901 ttcggcgcct tcctgggcgg cctgtaccga cactaccggg tggagcctgt cgaggggaag
      961 gcgcgctgga gcgaggcgcg gttcctcgcg ggcctcaccg cggtcggcgc cttgctcctc
     1021 gcatggggtt ccgccgccca gcagggctgg ctctggggtg gaacctggct tcagcagaac
     1081 ggggtgtgga tgctgcacag ccgcaccggc gccttcacct acggcgagct gggcggcatc
     1141 gccaacacca ccctgcccag cgtggcggcc cgggccggct ggatcctcct cggcggctcc
     1201 ctgatgggcg cggtcgagtt ggtgcggccc aagtggaagg gcccgaaccc catcaaggcc
     1261 gccagcgccg agtcgctgct gctctacatg ctgcacctca acctgatctt cggcgtgctg
     1321 ctggcccctg cggttctcgc ggtgacgggc tggggctggg gcacccaggg ctggaccggc
     1381 accctgctgc tgacggccgt gatcatcggc ctgaacctct gggcaggcgt ggcctggcag
     1441 cgggttcgcc agaccccgga gcgcatgcac ctcctccagc gccgggccgt ggcggcgctg
     1501 ggtgtgtggt tcgtgctggg cggctggtgg accttccgcc acttcctcca gagccccgag
     1561 ctggccaagg agccctaccg attcctgaac gccgcacggg tgcgcaaggg cctgccaccg
     1621 acgcccgacg ggctctcccg cgatcctgag gagtatttcc gggaggccga tcggctgaag
     1681 ctgcgcctcg gaccggcggc ccgggccgac gttgcacggc agatcctgga gcgacgggcg
     1741 caggaccccg gggaatcgcg ctagaattgg caaaataatg gctgattcag gcggcaacgc
     1801 ccccccatcc tggttcctgc tcgccgcgct cgcggtgatg g
//
LOCUS       DATGWW010000490         1619 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_36368, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000490 DATGWW010000000
VERSION     DATGWW010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36368"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..437)
                     /locus_tag="VK150_07120"
     CDS             complement(<1..437)
                     /locus_tag="VK150_07120"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLP31114.1"
                     /translation="MQAIIRPALPGDATAIASVGRESFTWAFGHLYEEGTLARYLEAT
                     YATAKIASSLEKPANTYFVAELDGRVRGFLKLKEACPHPSVTGPGTPWQTQKLYVDPS
                     LLRTGLGRRLMGAGEAWMRTRGAGSTWLVVYEGNDSAIRFYETL"
     gene            600..1586
                     /locus_tag="VK150_07125"
     CDS             600..1586
                     /locus_tag="VK150_07125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31115.1"
                     /translation="MTQLLDTILLFSLPASGKSEVRRYLASLTPDQCRNDFHMGPTLQ
                     LDDYPYVHLMHRIDDELKARGLDYAYYHGPTRPFRDNWTWAILIELLNEDYANLMASR
                     QTLVASAAQHLFDRLDAAHAKLGLSQPLGEIPHRLRVSMAEALEAECRAELDVLNRQN
                     AQDKAGRTLVIEAARGGAHGSAFPLCPPHGYDTAFQTLSPAILEKASVLYVWVDPAES
                     RRKNIERGRPNGQGSILHHSVPMEVMLGQYGTDDMAWLMEQSDRPGTIRVERLIQVGD
                     RYETKVYHLPVARFDNRADLTTFVREDQKLWKPEDVKAIHSGLKAAFDQLAK"
BASE COUNT          291 a          586 c          491 g          251 t
ORIGIN      
        1 agggtctcgt agaaacggat cgccgaatca ttgccctcgt agaccaccag ccaggtggat
       61 ccagcgcccc gcgtccgcat ccacgcctcg cccgcgccca tgagtcgccg cccgaggccg
      121 gtgcgcagga ggctgggatc cacgtagagc ttctgggtct gccatggcgt tccgggaccc
      181 gtcaccgagg gatgggggca ggcctccttc agcttcagga agccccggac gcggccgtcc
      241 agctcggcga cgaaataggt gttggcgggc ttttccaggc tgctggctat cttggcggtg
      301 gcgtacgtgg cctcgagata ccgggccaag gttccctcct catagagatg gccgaaggcc
      361 caggtgaagc tttcgcgccc cacggaggcg atggcggtcg catccccggg aagggctgga
      421 cggatgatgg cttgcatggg acctccaggc acgaagcccc cgcgggaagg ctcccgatcc
      481 agcattgaac ccggagcccg gcggcacaac ccggttcttg cgcatcgttg gctcgggcca
      541 tccgtgattc cgttttcccc ggggcgtggc atgcttgagg attcggacgg tggaatccca
      601 tgactcagct cctcgacaca atcctgctct tcagcctgcc ggcttccggc aagtcggagg
      661 tgcgccgcta cctggcgagc ctcacgccgg accagtgccg gaacgacttc cacatgggac
      721 ccaccctgca gctggacgac tacccgtacg tgcacctcat gcaccgcatc gacgacgagt
      781 tgaaggcccg cggcctcgac tacgcctact accacgggcc cacccggccc ttccgagaca
      841 actggacgtg ggccatcctc atcgagctgc tgaacgagga ctacgcgaac ctcatggcca
      901 gccgccagac cctcgtggcc agcgccgccc agcatctctt cgatcgcctg gacgccgccc
      961 acgccaagct gggcctctcc cagccgctcg gcgagatccc ccatcgcctc cgggtgagca
     1021 tggccgaggc gcttgaagcc gagtgccgcg ccgagctcga cgtcctcaac cgccagaacg
     1081 cacaggacaa ggcgggccgc accctcgtca tcgaggccgc ccgtggcggt gcgcatggtt
     1141 ccgcgttccc cctgtgcccg ccccacggct acgacacggc cttccagacc ctgtcgcccg
     1201 ccatcctgga gaaggcctcg gtgctttacg tctgggtgga tcccgccgag agccgccgca
     1261 agaacatcga gcggggccgg cccaacggcc agggcagcat cctccaccac agcgtgccca
     1321 tggaagtcat gcttggccag tacggcaccg acgacatggc ctggctcatg gagcagagcg
     1381 accgccctgg caccatccgc gtggaacgcc tcattcaggt cggcgaccgc tacgaaacca
     1441 aggtctacca cctccccgtg gcccgcttcg acaaccgcgc cgacctcacc accttcgtcc
     1501 gcgaggacca gaagctctgg aagcccgagg acgtgaaggc catccacagc ggcctgaagg
     1561 cggccttcga tcagctggcg aagtaaaaag aatccagtcc acagatttca cagattcac
//
LOCUS       DATGWW010000491         1793 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_36444, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000491 DATGWW010000000
VERSION     DATGWW010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36444"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..493)
                     /locus_tag="VK150_07130"
     CDS             complement(<1..493)
                     /locus_tag="VK150_07130"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HLP31116.1"
                     /translation="MAAPDWHTPAVRAVPPRWGLALAFFAVFVVWGTTYLAIRYAVET
                     IPPLVAAAIRHLTAGTILLGFAWSRGFRPRRAHWIAGSVVGALFFLIGHGSLHWAEQY
                     VPSGLAALLIASEPLWILVMGSALGQQRVNGLNGTGLLLGLAGVAALTAPTLTSMTVG
                     TWAM"
     gene            complement(695..976)
                     /locus_tag="VK150_07135"
     CDS             complement(695..976)
                     /locus_tag="VK150_07135"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HLP31117.1"
                     /translation="MHTIRFDGKTPGAAECDRETALLAASTKASVPLPHRCGGHARCG
                     TCIVTVVEGAEHLSEMGNAETRVLAALKAHPDQRLACQTWAKGDVSVKY"
     gene            complement(1035..>1793)
                     /locus_tag="VK150_07140"
     CDS             complement(1035..>1793)
                     /locus_tag="VK150_07140"
                     /inference="COORDINATES: protein motif:HMM:NF015406.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding domain-containing protein"
                     /protein_id="HLP31118.1"
                     /translation="GPLADYAGDRDRMDRPGTSRLSADLKFGTLSVRAVWQAVADAGG
                     GESVRRYLNELLWREFSHHLLWEWPALLERPFREGFAGFPWREDAAAWEAWTQGRTGY
                     PVVDAAARQLLAEGFVHNRARMVAASFLAKHLLLDYRRGEAHYLGWLTDGDWAQNNAG
                     WQWSAGCGCDAQPWFRIFNPVAQGARFDPEGAYVKRWVPELAACPPAFIHEPWKAPRA
                     LRAGLGYPDPIVDHASARERFLATAKGHLGRGTP"
BASE COUNT          313 a          619 c          597 g          264 t
ORIGIN      
        1 ccatggccca ggtgccaacg gtcatggacg tcaacgtggg ggcggtcagg gcggcgacac
       61 ccgccaggcc cagcaggagt cccgttccat tcaacccgtt gaccctctgc tggcccaggg
      121 cggaacccat caccaggatc cacagcggct cgctggcgat cagcagcgcc gccaaccccg
      181 aagggacgta ctgctccgcc cagtgcaggg aaccgtgacc gatgaggaag aagagggcgc
      241 ccaccacgct tcccgcgatc cagtgcgccc ggcggggccg gaagccccgg gaccaggcga
      301 accccagcag gatggtaccg gccgtcaggt gccggatcgc cgcggccacc aggggcggga
      361 tggtctccac cgcgtaacgg atcgccaggt acgtggtgcc ccacaccaca aagaccgcga
      421 agaaggccag agccagcccc caccgtggcg gaaccgcgcg aactgccgga gtgtgccagt
      481 cgggtgcagc catctgaata accccttcat agctatttat cggttacagg ttaaaaatgg
      541 attgataacc tgtcaagcct atttaagggg ttataaattt ctacgaaaag gcagggccga
      601 gtcacccagg aatggggacg aatgccactt ctcagggtga tccccgggat ggtctgtccg
      661 acgtaaggcc tggatggcgt cggcgtggaa gtccctagta cttcacgctc acgtcgccct
      721 tcgcccaggt ctggcaggcg aggcgctggt cggggtgggc cttgagggcg gccagcaccc
      781 gggtttcggc gttgcccatc tcgctcaggt gctcggcgcc ctcgaccacc gtgacgatgc
      841 aggtgccgca gcgggcatgg cccccgcagc gatgcggcag cggcacggaa gccttggtgc
      901 tggcggccag gagcgccgtt tcgcggtcgc attccgccgc gccgggcgtc ttgccatcaa
      961 atcggatggt gtgcatgtat tacccgtaag tcgttaaagc acgagagata gaatcacgcc
     1021 tgcccttcac tctatcaggg cgtcccccgt cccaggtggc cttttgccgt ggccaggaac
     1081 cgctcccggg cggaggcgtg gtccacgatg ggatcggggt agccgagccc ggcccggagt
     1141 gcccggggcg ccttccacgg ctcgtggatg aaggccgggg gacacgccgc cagttccggc
     1201 acccagcgct tcacgtaggc cccttccggg tcgaaccgcg cgccctgggc cacgggattg
     1261 aagatgcgga accagggctg ggcatcgcag ccgcaaccag cgctccactg ccacccggcg
     1321 ttgttctggg cccagtcgcc atccgtgagc cagcccaggt agtgcgcctc cccccggcgg
     1381 tagtccagca gcagatgctt ggcgaggaag ctggcagcca ccatccgcgc gcggttgtgg
     1441 acgaaccctt ccgccagcag ctgccgggcg gcggcgtcca ccaccgggta ccccgtgcgc
     1501 ccctgcgtcc aggcctccca ggcggctgcg tcctcgcgcc agggaaagcc cgcgaatcct
     1561 tcgcggaagg gccgctccag cagggccggc cactcccaga ggaggtggtg gctgaattca
     1621 cgccagagca gctcgttcag gtagcgccgg acggactcgc cgccgcccgc atccgccacg
     1681 gcctgccaga ccgcgcgcac cgacagcgtg ccgaacttca gatcggcgct gagccgcgag
     1741 gtgccagggc ggtccatacg atcccggtca ccagcgtagt ccgccagggg acc
//
LOCUS       DATGWW010000492         1931 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_381202, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000492 DATGWW010000000
VERSION     DATGWW010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1931)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1931)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1931
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_381202"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..480)
                     /locus_tag="VK150_07145"
     CDS             complement(<1..480)
                     /locus_tag="VK150_07145"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HLP31119.1"
                     /translation="MELTGYWSLLYQIPVGLIGLSFMVFIHELGHFAVAKWSGVKVHT
                     FSIGFGKKLIKWRRGDTEYALSAIPFGGYVAMSGESPDDGGYGNSDEFREKPIPVRMA
                     IAAAGPLFNLIFAVAILFGLYMVGVQEPRQVTVVGEVEEGSPAEKVGVKRGDELIKLG
                     "
     gene            complement(518..1795)
                     /locus_tag="VK150_07150"
     CDS             complement(518..1795)
                     /locus_tag="VK150_07150"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: protein motif:HMM:NF009114.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HLP31120.1"
                     /translation="MAERVRVSYNGRTGLFILTATMECRNIALLGATGSIGASTLKVL
                     RQHPERFRLVSVAAGRQWDKLLPILEEFKVRKACLADPEAARELRKHTSAKVVEGMEG
                     LLELVSDPDADYVLNGLVGAIGCRPTLEAISRGKHVGLANKETMVMAGEIINEALRRN
                     PSARLVPIDSEHSAIFQCLAGRPVSEVEHIELTASGGPFREWPASSFARITKTDALKH
                     PTWVMGAKITIDSATLMNKGLEVIEARHLFGLDYDRVKVVIHPRSIIHSFVQFRDGSL
                     MAQLGCPDMQLPIQYALTYPERLPLSVERLDMAAIGRLEFFAPDFAKFPCLSLAYRAG
                     RMGGTAPAILNAANEVAVARFLDDGLHFNGIPEVLAAVLDAARVEASPGLDQVIAADA
                     WAREAAAERIRALGPSRAVQARAIRPARMKAEI"
BASE COUNT          333 a          619 c          645 g          334 t
ORIGIN      
        1 cccgagcttt atgagctcgt cgccgcgctt cactcccacc ttctcggccg gagagccttc
       61 ctccacctcc cccaccacgg ttacctggcg gggctcctgc acgcccacca tgtagaggcc
      121 gaagaggatg gccacggcga agatgaggtt gaagagcggg cccgcggcgg cgatggccat
      181 gcgcacgggg atgggcttct cgcggaactc gtcggaattg ccgtagccgc cgtcgtcggg
      241 gctttctcct gacatcgcca cgtagccgcc gaaaggaatg gcggataggg cgtactccgt
      301 gtcgccgcgg cgccacttga tgagcttctt cccgaagccg atggagaagg tgtggacctt
      361 gaccccgctc cacttggcca cggcgaagtg gcccagctcg tggatgaaca ccatgaagct
      421 gaggccgatg aggcccacgg gaatctggta cagcagagac caatatcctg tcaattccat
      481 attgccttcc cgcgcatggg actcgtgtcc cggcgcttca gatctccgcc ttcatccgcg
      541 cgggtcggat ggctctcgcc tgcaccgcgc gacttggccc caaggcccgt atccgttccg
      601 ctgccgcctc ccgcgcccag gcatccgccg cgatcacttg atcgagaccc ggagaggcct
      661 ccacccttgc cgcgtcgagc acggcggcga gaacctccgg gattccattg aagtggagcc
      721 cgtcgtccag gaagcgggcc acggccacct cgttggcggc gttgaggatg gccggcgccg
      781 tgccgcccat gcggcccgcg cggtaggcga gggacaggca ggggaacttg gcgaagtcgg
      841 gagcgaagaa ttcaagcctg ccgatggccg ccatgtccag acgttccacc gacagcggca
      901 ggcgctcggg gtaggtgagg gcgtattgga tgggcagttg catgtccggg cagcccagct
      961 gggccattag ggagccgtcc cggaactgca cgaaggagtg gatgatggac cggggatgga
     1021 tgaccacctt cacccggtcg tagtccagcc cgaagaggtg gcgggcctcg atgacttcaa
     1081 gacccttgtt catgagggtc gcggagtcga tggtgatctt ggctcccatc acccaggtgg
     1141 gatgcttgag ggcgtcggtc ttggtgatgc gggcgaagga ggaggccggc cattcccgga
     1201 aagggccccc cgaggcggtg agctcgatat gctccacctc ggagacgggc ctgccggcga
     1261 ggcactggaa gatggcgctg tgctcggagt cgatggggac gaggcgcgcg gaagggtttc
     1321 gccggagagc ctcgttgatg atctctccgg ccatgaccat ggtctccttg ttggccaggc
     1381 ccacgtgctt gcctcgggag atggcctcca gggtcggacg gcagccgatg gcacccacga
     1441 ggccgttgag gacgtaatcc gcatcggggt cggagacgag ctcgagcagc ccctccatgc
     1501 cctccacgac cttggcggag gtatgcttgc gcagctcccg ggcggcttcc ggatccgcga
     1561 ggcaggcctt ccggaccttg aattcctcga ggatggggag aagcttgtcc cattgccgtc
     1621 cggcggcgac gctcaccaga cggaaccgtt ccgggtgctg gcggaggacc ttgagtgttg
     1681 aggccccaat cgacccggtc gcgcccagaa gggcgatatt tcggcattcc atcgttgctg
     1741 tcaatataaa aagacccgtc ctcccattat aggatacccg aacccgctct gccatttcga
     1801 taccccggcc tggttccaag gagtcccgga agccaagaac tcccaaaggc ccggacgttt
     1861 cccgggtcga aggcaggcct tgccccagga agccgggccc cctccccgtc ggaagcttcc
     1921 gtgggaggac c
//
LOCUS       DATGWW010000493         1943 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_36557, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000493 DATGWW010000000
VERSION     DATGWW010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36557"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..491)
                     /locus_tag="VK150_07155"
     CDS             complement(<1..491)
                     /locus_tag="VK150_07155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31121.1"
                     /translation="MRLSPFRALLAAHFQTAWNRSAREMGRQGVWAMGLLVGITGLLA
                     AGPLFLGMGGLGWLLGSRLDRPFAAALLGLALALISLGGGLFGGVAGGTRQLSWEAYR
                     GYPLKLRSLYLAELAAGIADPLPLILGVGLAGLLTGVALALSVSLGAPGTALLLPLLL
                     LETL"
     gene            complement(514..1257)
                     /locus_tag="VK150_07160"
     CDS             complement(514..1257)
                     /locus_tag="VK150_07160"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLP31122.1"
                     /translation="MSALELDSLTKRFGDKTAVDALSLRLEPGSFLGLLGRNGAGKST
                     TLKMVTGLLKPTSGRIRVLGLDLEAEPLAIKRQIGTMPEDMALLDMLSGPQYLRFVGR
                     MYGMPDALIDGRREELFDKLDLGVTPKQLIADYSFGMKKKVALCAALIHGPRMVFLDE
                     PFEGIDPVTSRTIKDILHSLQQSGVTLVLTSHILEVVEKLCPLIAILDEGRLKGFGPL
                     DELRRGGQSLEQLFVDLVGGAQKGELSWL"
     gene            complement(1305..>1943)
                     /locus_tag="VK150_07165"
     CDS             complement(1305..>1943)
                     /locus_tag="VK150_07165"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP31123.1"
                     /translation="REVLERLFLHDVANLMQGIRSWTDLLISGAGRPKAVAQKLAHLT
                     DLLDRELKGHQAMLLAEHGQLKPRVRAVLPLEILQDVADLLSRHALAGDRRVVILPAP
                     EGMIHTDPELLSRVVQNMAINAVEASFTGEAITLSARAEGPHIRFLVHNPGEIPEAFR
                     SRIFLRSFSTKGSPGRGLGTYAMKLFGENVLRGQVGYDTGPDGTTFWIRIAR"
BASE COUNT          302 a          655 c          701 g          285 t
ORIGIN      
        1 agggtctcca gcagcaggag gggcaggagg agcgccgtgc cgggcgcgcc cagggagacg
       61 ctgagggcca gcgccacgcc cgtcaggagg cccgccaggc ctacgcccag gatgagtggc
      121 agcggatcag cgatgcccgc ggccagctct gccaggtaca ggctccggag cttcaggggg
      181 tagccgcggt aggcctccca gctcagctgc cgggtgcccc ccgccacgcc gccgaagagg
      241 ccgccaccga ggctgatgag ggccagggcc aggcccagga gcgcggcggc gaaaggccgg
      301 tcgaggcggc tgcccagcag ccagcccagg ccccccatgc ccaggaagag cggtcccgcg
      361 gccaacaggc ccgtgatccc caccagcagg cccatggccc acacgccctg gcgtcccatc
      421 tcccgcgcgg agcggttcca ggcggtctgg aagtgggcgg cgagcagggc ccggaagggg
      481 ctcaggcgca tgggaccgcc atgcccttca ggttcacagc catgacagct cccccttctg
      541 ggcgccgccc accaggtcga cgaagagctg ttcgaggctc tggccgcccc gccgcagctc
      601 gtcgaggggg ccgaagccct tgagccggcc ctcgtccagg atggcgatga ggggacagag
      661 cttttccacc acctcgagga tgtggctggt gagcaccagc gtgacgccgc tctgctgcag
      721 gctgtggagg atgtctttga tggtgcggct ggtgacggga tcgatgccct cgaagggttc
      781 gtcgaggaac accatccgcg gcccgtggat cagcgccgcg cagagggcca ccttcttctt
      841 catgccgaag ctgtagtcgg cgatgagctg tttcggcgtc acgcccaggt ccagcttgtc
      901 gaagagctcc tcgcggcggc catcgatgag cgcgtccggc atgccgtaca tgcggcccac
      961 gaaccgcagg tactggggtc cgctgagcat gtcgaggagg gccatgtcct cgggcatggt
     1021 tccgatctgg cgcttgatgg cgagcggctc ggcctccagg tccaggccca gcacgcggat
     1081 gcggcccgac gtgggcttca gcaggcccgt caccatcttc agcgtggtgg atttcccggc
     1141 gccgttgcgc cccagcaggc ccaggaagct gccgggctcc aggcgcaagc tcagcgcgtc
     1201 caccgctgtc ttgtcgccga aacgcttggt gagggagtcg agttccaggg cggacatccc
     1261 tggatggtat cagtggccca gaccagagct cgaggagccg gggctcagcg ggcgatccgg
     1321 atccagaagg tggtgccgtc cgggccggtg tcgtagccca cctggccgcg cagcacgttc
     1381 tcgccgaaca gtttcatggc gtaggtcccc aggccccgcc cggggctgcc cttggtgctg
     1441 aaggagcgca ggaagatgcg gctccggaac gcctcgggga tctcacccgg attgtggacc
     1501 aggaaccgga tgtgcgggcc ctccgcccgg gcggagaggg tgatggcctc gcccgtgaag
     1561 gaggcctcca ccgcgttgat ggccatgttc tgcaccaccc gggagagcag ctcggggtcg
     1621 gtgtggatca tcccttccgg cgcgggcagg atcaccaccc gtcggtcccc cgccagagcg
     1681 tggcgactca gcaggtcggc cacgtcctgg aggatttcca gcggcaggac cgcccgaacg
     1741 cggggtttca gctgcccgtg ctcggcgagg agcatggcct ggtggccctt cagctcgcgg
     1801 tccaggaggt cggtcaggtg agccagcttc tgcgccacgg ccttggggcg tccggcgccg
     1861 gaaatcagca agtcagtcca gctccggatg ccctgcatga ggttggccac gtcgtggagg
     1921 aagaggcgct ccaggacctc ccg
//
LOCUS       DATGWW010000494         1579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_36567, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000494 DATGWW010000000
VERSION     DATGWW010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36567"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..>1579
                     /locus_tag="VK150_07170"
     CDS             117..>1579
                     /locus_tag="VK150_07170"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HLP31124.1"
                     /translation="MATADERMLALAVARGLVEPGEAAADGLDGLIASGRLDSGARRM
                     LQQDLADLDEAEANHWSMEITADLPQVRDQARDLVRESDPTGTGTGAFGGPLPSDPSY
                     PSAGYRQGGPFRAASLDRWGRFESLELLGEGGMGRIFQATDPRLRRPVALKLLRRDEP
                     DTLKRFIQEAQLQARVDHPNVCRVYEVGEWRGQPYIAMQLIRGETFQQAAPTLPLDSL
                     LRLMVDVCEGVHAAHRVGLVHRDLKPTNLMVDHAEDGTVRACVLDFGLARGAEGGGFT
                     ETGRVMGTVSYMSPEQARGNASLLDRRSDVYSLGATLYTLLDGAPPFGGEGLECMGRI
                     VKDDPVPLRRRRPALPADLDTVVLTCLQKDPRKRYPTARALGEDLQRILDGEPIQARA
                     ATPLERLGHWARKHKAIVTASAAILLTAAIFGGFAVRERLRARTQAALAQRFAQEAER
                     IEALTRYIKLSPPHDLRPELRDLEARVTRLAGDVRAEG"
BASE COUNT          210 a          602 c          565 g          202 t
ORIGIN      
        1 ccatggccag tctgacccgc gcccggggcc cggtcaaccg tggacgcttc acggaaacgg
       61 gcaatcccgt caccatggag gcttcctcca ggagtgtccc gtgcgcacag gcagccatgg
      121 ccaccgctga cgagcggatg ctggccctgg ccgtggcgcg ggggctcgtg gaacccggcg
      181 aggccgcggc ggacgggctc gacggcctga tcgccagcgg ccggctggat tccggcgccc
      241 gccgcatgct gcagcaggac ctggccgacc tggacgaggc ggaggccaac cactggtcca
      301 tggagatcac cgccgacctg ccccaggttc gggaccaggc ccgggatctg gtgcgggagt
      361 ccgaccccac cgggaccggg accggggcct tcggcggccc cctgccgtcg gatccctcgt
      421 acccgtcggc gggctaccgg cagggcgggc cgttccgggc cgcctcgctg gaccgctggg
      481 ggcgcttcga gtccctggag ctgctggggg aagggggcat gggccgcatc ttccaggcta
      541 cggatccgcg cctgcggcgc cccgtggccc tgaagctcct gcgccgggac gagcccgaca
      601 ccctcaagcg gttcatccag gaggcgcagc tccaggctcg ggtggaccac cccaacgtgt
      661 gtcgggtcta cgaggtgggc gagtggcggg gtcagcccta catcgccatg cagctcatcc
      721 ggggcgagac gttccagcag gccgcgccca ccctgcccct ggactcgctg ctgcgcctga
      781 tggtcgacgt ctgcgagggg gtgcacgccg cccaccgcgt gggcctggtg caccgcgacc
      841 tcaagcccac caacctcatg gtggaccacg cggaggacgg caccgtccgc gcctgcgtcc
      901 tggacttcgg cctggcccgg ggggccgagg gcggcgggtt cacggagacg ggccgcgtca
      961 tgggcaccgt gagctacatg tcccccgagc aggcccgcgg gaacgcctcc ctgctggacc
     1021 gccggtcgga cgtctactcc ctgggcgcca ccctctacac cctgctcgac ggggcgccgc
     1081 ccttcggcgg cgagggcctg gagtgcatgg gccgcatcgt gaaggacgat cccgtgcccc
     1141 tgcggcggcg gcggcccgcc ctcccggcgg acctcgacac ggtggtgctc acctgcctgc
     1201 agaaggatcc gcgcaagcgc taccccaccg cccgggccct gggggaggat ctgcagcgca
     1261 tcctcgacgg cgagcccatc caggcccggg ccgccacgcc ccttgagcgc ctgggccact
     1321 gggcgcgcaa gcacaaggcc atcgtgaccg cctccgccgc gatcctcctc accgcagcca
     1381 tcttcggcgg cttcgccgtg cgggagcgcc tccgcgcccg cacccaggcg gccctcgccc
     1441 agcggttcgc ccaggaggcc gaacgcatcg aggccctgac ccgctacatc aagctttccc
     1501 cgccccacga cctgaggccg gagctgcggg acctggaagc gcgcgtgacc cggctggcgg
     1561 gggatgtgcg ggccgaggg
//
LOCUS       DATGWW010000495         2409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_310854, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000495 DATGWW010000000
VERSION     DATGWW010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310854"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..243)
                     /locus_tag="VK150_07175"
     CDS             complement(<1..243)
                     /locus_tag="VK150_07175"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLP31125.1"
                     /translation="MLTRALGTQGLTVSALGLGCMGMSEFYGHRDDAESTATLLHAVD
                     RGITLFDTADIYGPHLNEVLVGKALAGIRNRVVIATK"
     gene            complement(380..1030)
                     /locus_tag="VK150_07180"
     CDS             complement(380..1030)
                     /locus_tag="VK150_07180"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HLP31126.1"
                     /translation="MSTIPGESLLEQLNWRYATKKFDPSRKISAADWSVLEQALVLTA
                     SSYGLQPWKFIVVTDPALKAKLRPASWNQSQVEDCSHLVVFTAKQDITEADVDQFVGR
                     IAEVRGVSLESLAGYKGYMVGDLVKGARHAVIHEWAARQTYIAMGNLLTSAALLGIDT
                     CPFEGLEPAKYDEILGLKGTGYATISACPVGYRSADDKYASTPKVRFEAKDVVEHR"
     gene            complement(1063..1383)
                     /gene="trxA"
                     /locus_tag="VK150_07185"
     CDS             complement(1063..1383)
                     /gene="trxA"
                     /locus_tag="VK150_07185"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HLP31127.1"
                     /translation="MSDLIQNLTDKTFSGAVAHGITVVDFWAPWCAPCRELAPVTEAL
                     AAELKGKAAFAKLNVDDFTPLSEEYDVLSMPTLVVFKDGQPVDRIVGALPIDQLRTRI
                     EQSI"
     gene            complement(1456..2007)
                     /locus_tag="VK150_07190"
     CDS             complement(1456..2007)
                     /locus_tag="VK150_07190"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HLP31128.1"
                     /translation="MTRVAIVYHSGYGHTKVMAERVKAGAESVAGTRASLISVEEIDA
                     HWADLEAADAIVFGSPTYMGNVSGPFKTFMDASSKPWLERKWQDKLAAGFTISGSPSG
                     DKLNTLQSLMIFAMQHGMVWVGNADLPYSEEGINRLGSFTGVMAQAGQVAPEVEPNEP
                     DRKSAERLGQRLAAAAARWAQAS"
     gene            2113..>2409
                     /locus_tag="VK150_07195"
     CDS             2113..>2409
                     /locus_tag="VK150_07195"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLP31129.1"
                     /translation="MVSKAISKACTLAPNVLSAQCPTRQALDLIADKWTTLLIYLLSR
                     GKQRYGDLHRQVGGISQKMLTQTLRKLERDGLVTRHVYPEVPPRTEYELTKLGHT"
BASE COUNT          398 a          756 c          811 g          444 t
ORIGIN      
        1 cttggtggcg atcaccaccc ggttccggat gccggccagg gccttcccca ccaggacttc
       61 gttgaggtgg gggccgtaga tgtcggcggt gtcaaagagg gtgatgcccc ggtccacggc
      121 gtgaaggagg gtcgccgtgg attccgcgtc atcgcggtgg ccgtagaact cggacatgcc
      181 catgcagccg aggccgaggg cggatacggt gaggccttgg gttccgaggg cgcgggtcag
      241 catggcgatc tcctcctctc agtgtgatcc caaaaaagga tctaccacca agacaccaag
      301 gcaccaagaa ctgcaaaagc aaagcagttg cttttctggg tgccttggtg tcttggcggt
      361 gaaatctgtt gcccgtggct cagcggtgct cgacgacgtc cttggcctcg aagcgcacct
      421 tgggcgtgct cgcgtacttg tcgtccgccg agcggtagcc cacggggcag gcgctgatgg
      481 tggcgtagcc ggtgcccttg aggcccagga tctcgtcgta cttggcgggt tccagaccct
      541 cgaaggggca ggtgtcgatg cccagcaggg cggcggaggt gagcaggttg cccatggcga
      601 tgtaggtctg ccgggccgcc cattcgtgga tgacggcatg acgggccccc ttcaccaggt
      661 cgcccaccat gtagcccttg tagccggcca ggctctccag ggagacgccg cgaacctccg
      721 cgatgcggcc cacgaactgg tcgacgtcgg cctccgtgat gtcctgcttg gcggtgaaga
      781 ccaccaggtg gctacagtcc tcgacctggg actggttcca ggaggcgggg cgcagcttgg
      841 ccttgagggc ggggtcggtg accacgatga acttccaggg ctgcaggccg tagctggagg
      901 ccgtgagtac gagggcctgc tccagcacgg accagtcggc ggcggagatc ttgcggctgg
      961 gatcgaattt cttggtggcg tagcgccagt tcagttgttc aagcaggctc tcgcccggga
     1021 tggtgctcat gggtacctcg aaatgttcga tgggaaagga aactagatgg actgctcgat
     1081 gcgggtccgc agctggtcaa tggggagggc ccccacgatg cggtccacag gctgcccatc
     1141 cttgaagacc accagggtgg gcatgctcag cacgtcgtat tcttcggaga gtggggtgaa
     1201 gtcgtccaca ttcagcttgg cgaaggcggc cttgcccttg agctcggcgg cgagggcctc
     1261 ggtcacgggt gcgagctcgc ggcagggcgc gcaccaggga gcccagaaat ccaccaccgt
     1321 gatgccatgg gcgacggccc cggaaaaggt cttgtcggtc aggttctgga tcagatcgga
     1381 catgcctagg ctcctggttc tcccttccag gttaacggat ccggcgcctt tctccgtcat
     1441 gacaatctcc gaacctcagg aggcctgcgc ccagcgggcc gcggcggcgg cgaggcgctg
     1501 gcccagccgc tcggcgctct tgcggtcggg ctcgttgggt tccacctccg gggccacctg
     1561 gccggcctgg gccatgacac ccgtgaagct gccgaggcgg ttgatgccct cctcgctgta
     1621 gggcaggtcg gcgttgccca cccagaccat gccgtgctgc atggcgaaga tcatcaggga
     1681 ctgcagggtg ttcagcttgt cgccgctggg gctgccgctg atggtgaagc cggcggccag
     1741 cttgtcctgc cacttccgct ccagccaggg cttcgagctg gcgtccatga aggtcttgaa
     1801 ggggccgctc acgtttccca tgtaggtggg gctgccgaac acgatggcgt ccgctgcctc
     1861 gaggtcggcc cagtgggcgt cgatctcctc cacggagatc aggctggccc gggttccggc
     1921 cacggactcg gcgccggcct tcacccgctc ggccatcacc ttggtgtggc catatccgct
     1981 gtggtacacg atggcgactc tggtcatgtt catctcctgt tcaggccctt gcaatctgcc
     2041 ggcccgtgac ccaaacttta ggtgcttacg atcgaaaaga aagtaggcac tattttggaa
     2101 ggtaggcacc ccatggttag taaagcgatc agcaaggctt gcacgctcgc ccccaacgtc
     2161 ctcagcgccc agtgccccac gcgccaggcc ctggacctca tcgcggacaa gtggacgacc
     2221 ctgctcatct acctgctgtc ccgcggcaag cagcgctacg gcgacctgca ccgccaggtg
     2281 ggcggtatca gccagaagat gctgacccag actctgcgca agctggagcg ggacggcctc
     2341 gtcacgcggc acgtctaccc cgaggtgccg ccccgcaccg agtacgagct gaccaagctg
     2401 ggccacacc
//
LOCUS       DATGWW010000496         1817 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_154184, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000496 DATGWW010000000
VERSION     DATGWW010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154184"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1085
                     /locus_tag="VK150_07200"
     CDS             <1..1085
                     /locus_tag="VK150_07200"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HLP31130.1"
                     /translation="WKAADFLPEDHPLFAGRPGASGQRGANFTQQNSDWLLSVGARLD
                     FGQIAYMHDLFARGARKLVVDIDPAELQKLRMDLDLSLAADAGDFFRALLAALPAHPQ
                     PNRAAWLGRVADWKARYPVLKPEYWQEQGHVNAYVLIEVLSDLLGAGDVLAPGSSGQS
                     SELTCQALRVRQGLRMLNSQGLGPMGFGVPAALGACVASGGKRTVCVDGDGGFHMNLQ
                     ELEVIRRLNLPITFFVLDNQGYGSIRNSQRSYFGGRLVASDATSGLTLPDTLAVARAY
                     GLATAHLESHEGLRERIAEILARRGPTVCVVKLDPDQPTLPRVTSYMKADGQMATRPM
                     EDMYPYLDRESLRAEMMVPMLDTPPV"
     gene            1089..>1817
                     /locus_tag="VK150_07205"
     CDS             1089..>1817
                     /locus_tag="VK150_07205"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HLP31131.1"
                     /translation="MKLLVTGGSGFIGRNLGEGLAVDHAVVAPGHSDLDLLDEGAVRA
                     FLREGQFDAVIHAATWNATRVSAKDTSLTLDRNLRMFFNLLRERESFGRFIHFGSGAE
                     YSREHWHGGMQEDEAGRHIPSDDYGLSKLLASRCGESLPGVTNLRLFGVFGPHEDWRI
                     RFISSNACRGLFDQPIRIRQDRRFDFLHVDDVVAAVKGVLRSEAWEGTYNLCRGRGER
                     LGVIAAMVLRALGKDLPVVISEPGE"
BASE COUNT          279 a          625 c          624 g          289 t
ORIGIN      
        1 cctggaaggc ggcggacttc ctgccggagg accacccgct gttcgccgga cgccccgggg
       61 cctcggggca gcggggcgcg aacttcacgc agcagaacag cgactggctg ctctccgtgg
      121 gcgcccgcct ggacttcggc cagatcgcct acatgcacga cctcttcgcc cggggggccc
      181 ggaagctcgt ggtggacatc gatccggcgg agctccagaa gctgaggatg gacctcgacc
      241 tttccctggc ggccgatgcg ggtgacttct tccgggcgct cttggcggcg ctgcccgccc
      301 acccccagcc gaaccgcgcc gcgtggctgg gccgggtggc cgactggaag gcccgctatc
      361 ccgtgctgaa gccggagtat tggcaggagc agggccatgt gaacgcctac gtgctgatcg
      421 aggtgctctc cgacctgctg ggcgcgggcg atgtgctggc gccgggttcc tcgggccaga
      481 gcagcgagct gacctgccag gccctccggg tgcgccaagg cctccggatg ctcaacagcc
      541 agggcctcgg gcccatgggt ttcggcgttc cggcggccct gggcgcctgc gtcgcgtccg
      601 gcgggaagcg cacggtctgc gtggatggcg atgggggctt ccacatgaac ctccaggagc
      661 tggaagtcat ccgccgcctg aacctcccca tcaccttctt cgtgctcgac aaccaggggt
      721 acggctccat ccggaacagc cagcgcagct acttcggagg acgcctcgtg gccagcgacg
      781 ccacgtccgg cctcaccctg cccgacaccc tagccgtggc ccgcgcctac gggttggcca
      841 cggcccacct ggaatcccat gagggactgc gggagcggat cgcagagatt ctggcccgtc
      901 ggggccccac ggtctgcgtg gtgaagctcg atccagacca gcccaccctc ccccgggtga
      961 ccagctacat gaaggcggac ggccagatgg ccacccggcc catggaggac atgtatccct
     1021 acctggaccg ggagtccctg cgcgccgaaa tgatggtgcc catgctcgac acgcccccgg
     1081 tctgagccat gaagctcctg gtcaccggag gcagcggatt catcgggcgg aacctcggcg
     1141 agggcctggc ggtggaccat gccgtggtcg caccgggaca ttcggacctg gacctgctgg
     1201 acgagggcgc ggtgcgtgcc ttcctgcggg aaggccaatt cgatgccgtc atccatgccg
     1261 cgacctggaa cgcgacccgg gtctcggcca aggacacctc cctcaccctg gaccggaacc
     1321 tccggatgtt cttcaacctg ctccgcgaac gggaatcctt cggccggttc atccatttcg
     1381 gcagcggcgc ggagtattcc cgcgagcatt ggcatggcgg catgcaggag gacgaggcgg
     1441 gacggcacat tccatccgac gactacgggc tgtcgaaact gctcgcttcc cgctgtggcg
     1501 agtcccttcc cggagtcacc aacctccggc tcttcggtgt gttcgggccg cacgaggact
     1561 ggaggatccg gttcatttca agcaatgcct gccgggggct gttcgaccag ccgatccgga
     1621 tcaggcagga ccggcgcttc gacttcctgc acgtcgacga cgtggtggcc gcggtgaagg
     1681 gcgtgctccg gtcagaggca tgggagggca cctacaacct gtgccgcggg cggggggagc
     1741 gcctcggcgt gatcgccgcg atggtcctgc gcgccctcgg gaaggacctg cccgtggtga
     1801 tcagcgaacc cggagag
//
LOCUS       DATGWW010000497         2526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_84351, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000497 DATGWW010000000
VERSION     DATGWW010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84351"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VK150_07210"
     CDS             complement(<1..312)
                     /locus_tag="VK150_07210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31132.1"
                     /translation="MARPNLNPRGESVLRTLIETYLEAGEPVGSRLLAKRYPEPLSSA
                     TIRNVLSDLEDEALVAQPHTSAGRVPTERAYRYYVDRWLKPHPLGEEDEGRLRAALDG
                     LE"
     gene            373..1215
                     /locus_tag="VK150_07215"
     CDS             373..1215
                     /locus_tag="VK150_07215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31133.1"
                     /translation="MRPLLTHLSLAAVLALTLACNRKSEAAIQAEEAAKAAEAKVAQL
                     EQQLAEAKSGKITGGDADTVQHLTKSQVKALERQVADAKKRAEAKKQEAITLAQAPAA
                     KEAPKAVVVEVPVGTKLEITLARELSTDKDQAGDAWEGTLASDVVQDGKLVWSAGSSA
                     RGVVTQSAAAGRLSQGQGALGIRLTEIAGVGIDTDTHVVVATARGERNAKFIGGGAAL
                     GALVGILSDKKNKNDHALGGAALGAAAGTAVAAGTADTVIRIPSGKPVSFSLTAPEKV
                     TLRK"
     gene            complement(1293..2366)
                     /gene="prfA"
                     /locus_tag="VK150_07220"
     CDS             complement(1293..2366)
                     /gene="prfA"
                     /locus_tag="VK150_07220"
                     /inference="COORDINATES: protein motif:HMM:TIGR00019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HLP31134.1"
                     /translation="MLDQLEAVEARFQEVEAQLQDPSVVSDPKRLRELSKLRAELEPV
                     VLAFQGHRNLIKQLEEAESILADKSMDAELREMAEMEIPELRKAIAEGDAEIKRLLIP
                     KDPADEKNVILEVRAGTGGEEAALFAAELFRMYIRFAERRGFKVSVLDESDADAGGLK
                     EATAEIQGDGAYSLFRFESGVHRVQRVPKTETQGRIHTSAATVAVMPEAEEVDIEIHP
                     KDLRIDTFCSGGKGGQSVNTTYSAVRLTHLPTNTVVSCQDERSQIKNMAKAMTVLRSR
                     LLQKAQDEADAAHSALRKSQVGSGDRSEKIRTYNFPQGRVTDHRIGVTIHQIDSFMGG
                     QIEPIIEPLRAAFEAERLQALEA"
BASE COUNT          376 a          876 c          871 g          403 t
ORIGIN      
        1 ctccaggccg tccagggctg cccggagccg cccctcgtct tcctccccga ggggatgggg
       61 cttgagccag cggtccacgt agtagcggta ggcccgctcg gtgggcacgc gccccgccga
      121 ggtgtgcggc tgggccacca gggcctcgtc ctccaggtcc gacagcacgt tgcggatcgt
      181 ggcgctggag aggggctcgg ggtaccgctt ggccagcagc cgcgacccca caggctcccc
      241 cgcctcgagg taggtctcga tgagggtgcg cagcacggat tcgccgcggg ggttgaggtt
      301 cggtcgggcc atgggtgaat cccgtcggga tgccatacta tacggcacgt cccatcccac
      361 ccaggaggcc ccatgcgccc gcttttgacc catctgtccc tcgcggcggt ccttgctctc
      421 accctggcct gcaaccgcaa gagcgaagcc gccatccagg ccgaggaggc cgcgaaggcc
      481 gccgaggcga aggttgccca gttggagcag cagctcgccg aggcgaagtc cggcaagatc
      541 accggcgggg atgcggacac cgtccagcac ctcaccaagt cgcaggtgaa ggccctcgag
      601 cgccaggtgg ccgatgccaa gaagcgcgcc gaggccaaga agcaggaggc catcaccctg
      661 gcccaggccc cggcggccaa ggaggccccc aaggccgtgg tggtggaggt acccgtgggg
      721 accaagctcg agatcaccct cgcccgggag ctgagcaccg acaaggacca ggccggagac
      781 gcctgggaag gcacgctggc ttcggatgtc gtccaggacg gcaagctcgt ctggagcgcc
      841 ggcagctccg cccgcggcgt cgtcacccag agcgcggccg cgggccgcct gagccagggc
      901 cagggcgccc tcggcatccg gctgaccgaa atcgccggcg tgggcatcga caccgacacg
      961 cacgtggtgg tcgctacggc ccggggcgag cgcaatgcca agttcattgg cggcggtgcg
     1021 gccctcggcg ccctcgtggg catcctctcc gacaagaaga acaagaacga ccacgccctg
     1081 ggcggcgcgg ccctcggcgc cgccgcgggc accgccgtcg cggccggcac cgccgacacc
     1141 gtgatccgca tcccctcggg caagcccgtc tccttcagcc tgaccgcccc ggagaaggtc
     1201 accctgcgga agtagcacct ggccaacaac gaacgaagcg ggaggcgcgc ctcccgcttc
     1261 gttcgttcag gtttccggag gcgccggtcc gctcaggctt ccagcgcctg cagccgctcc
     1321 gcctcgaacg ccgcgcgcag gggctcaatg atgggctcga tctggccgcc catgaagctg
     1381 tcgatctggt ggatggtgac gccgatgcgg tggtcggtga cgcggccctg ggggaagttg
     1441 taggtgcgga tcttctcgct gcggtcgccg ctgcccacct gggatttccg cagcgcggag
     1501 tgcgcggcgt ccgcctcgtc ctgggccttc tggagcaggc ggctgcgcag cacggtcatg
     1561 gccttggcca tgttcttgat ctggctgcgc tcatcctggc agctgaccac cgtgttcgtg
     1621 ggcaggtggg tcaggcgcac ggccgagtag gtggtgttca cgctctggcc acccttgccg
     1681 ccagagcaga aggtgtcgat gcgcaggtcc ttcgggtgga tctcgatgtc cacctcctcc
     1741 gcctcgggca tgaccgccac cgtggccgcg gacgtgtgga tccgcccctg ggtttcggtc
     1801 ttgggcaccc gctgcacgcg gtgcacgccg ctctcgaagc ggaaaagact gtaagcgccg
     1861 tccccctgga tttcggccgt ggcctccttg aggccgcccg cgtcagcgtc gctctcgtcc
     1921 agcaccgaga ccttgaagcc cctgcgttcg gcgaagcgga tgtacatgcg gaacagttcg
     1981 gcggcgaaga gcgccgcttc ctcaccgccc gtgccggcgc ggacttcgag gatcacgttc
     2041 ttctcatcgg ccgggtcctt gggaatgagc aggcgcttga tctcggcatc gccctcggcg
     2101 atggccttcc tcagctcggg gatttccatc tccgccatct cgcgcagctc ggcgtccatg
     2161 gacttgtcgg ccaggatgga ctcggcctcc tcaagctgtt tgatgaggtt ccggtgtccc
     2221 tggaaggcca gcaccaccgg ctccagctcc gcccggagct tggacagctc ccgcagacgc
     2281 ttggggtcgg acaccaccga cggatcctgc agctgcgcct ccacttcctg gaagcgggct
     2341 tcgacggctt caagctgatc gagcatggtc cacctctaaa atccgagtgc agcctccgcg
     2401 gagcgacgat cttcactggg ggcttggggg tcccgggggt gttcgcgcag cgaggaaccc
     2461 ccggagggta taagccacag accgcttgcc gggatggggc ttgggggtcc gggggtgttc
     2521 gcgcag
//
LOCUS       DATGWW010000498         3074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_310885, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000498 DATGWW010000000
VERSION     DATGWW010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3074
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310885"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VK150_07225"
     CDS             complement(<1..268)
                     /locus_tag="VK150_07225"
                     /inference="COORDINATES: protein motif:HMM:NF014862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HLP31135.1"
                     /translation="MDKLTTKFQNALAEAQSLAVGRDHQFIEPLHLMQALLDQQGGTV
                     RPLLAQAGVNVTALRSQLGNALDRLSKVEGNAGDVHVSNDLTRLL"
     gene            complement(350..1042)
                     /locus_tag="VK150_07230"
     CDS             complement(350..1042)
                     /locus_tag="VK150_07230"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HLP31136.1"
                     /translation="MNLFSSAVLLALLVFAWRAAMRALDRAAGADWGGKWVNRIDGLN
                     RIFCRRWHRLSAECLPLPESGPALLVANHISGLDPLLLIAASRRPLRFIIAKEQYHRF
                     GLEWLFRAAGCIPVDRSERPERAFREALRVLKAGEVVALFPHGKIHLDTDPPRPLKQG
                     VARFAHLAKIPVHAARIEGVAGRGEVVKAVFLRGHARVSGAILVPCHELATHECLERV
                     AAIIENRAPGSS"
     gene            complement(1056..1583)
                     /gene="def"
                     /locus_tag="VK150_07235"
     CDS             complement(1056..1583)
                     /gene="def"
                     /locus_tag="VK150_07235"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: protein motif:HMM:NF001159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HLP31137.1"
                     /translation="MAILEILTYPDERLQRESEPVERFDAELHAFIADLEETMRAGPG
                     GVGIAAPQVGRFQRVVIVDCSVTRKPVPNHGRLVLVNPELLTWEGMEVGREGCMSVPD
                     YTGNVIRATHITLAAQNEQGEKMEYAFEGFEARAVQHELDHLDGMLFLDRLVSRRNDL
                     FRRKVYQEPKKQEKV"
     gene            complement(1696..2217)
                     /locus_tag="VK150_07240"
     CDS             complement(1696..2217)
                     /locus_tag="VK150_07240"
                     /inference="COORDINATES: protein motif:HMM:NF025116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HLP31138.1"
                     /translation="MSKWYMLTLVGKDRPGIVAKVSSALFEGGGNLGEASMMRLGGNF
                     SIMLMVSYEGTAKQLMDLVEPVADSLGLHYHVDRIEGGLHRHHVPDVRITVYGADRAG
                     IVAKVTGALAEAGLDVTDLESDVAGSADKPIYIMQIEGMAREGVEALQSALDVVAAEG
                     INVKLSSIETLFG"
     gene            complement(2238..3017)
                     /locus_tag="VK150_07245"
     CDS             complement(2238..3017)
                     /locus_tag="VK150_07245"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HLP31139.1"
                     /translation="MSLLAQVVLFSLLGGLLSVAAAGVFLLLPERWRTHVLPHFVSYA
                     IGAMLGAAFLGLLPEAIESAGAEQAPAIFATVLAGLFGFFLLEKFVLWHHCHDEVCEG
                     GAHVHTHGSHASGVLILVGDGIHNFVDGVLIAAAFLTDAQLGILTAIAVAAHEIPQEV
                     GDFAILLHSGFTTARAFVFNMLSSLTTILGAVLAWLTLSDVQAAVPYVVAVAAASFIY
                     IAVADLIPGLHRKVNVRATLQQAALILAGVATIYVSEIVLH"
BASE COUNT          547 a         1014 c         1037 g          476 t
ORIGIN      
        1 tgaggagccg cgtcaggtcg ttggagacgt ggacgtcgcc cgcgttgcct tccaccttcg
       61 acaggcgatc gagggcgttg ccgagctgcg agcgcagggc ggtgacgttc acgcccgcct
      121 gggcaagcag gggccgcacc gtgccgccct gctggtcgag cagggcctgc atcaggtgca
      181 ggggttcgat gaattggtga tcgcgcccga ccgcgaggct ctgggcctcg gccagggcgt
      241 tctgaaactt ggtggtcaac ttgtccatgc gcatggcacg tcaatcctca acgaagaacg
      301 tcggcatgca cccaagatgg ggccggcggg ccccgggatc aagcgggggt caggaggaac
      361 cgggggcgcg gttttcgatg atggcggcca cccgctccag gcattcgtgg gtggccagtt
      421 cgtggcaggg gaccaggatg gccccggaga cccgggcgtg gccgcgcagg aacaccgcct
      481 tcaccacctc gccgcggccc gccacccctt cgatgcgggc ggcgtgaacc gggatcttcg
      541 ccaggtgggc aaaacgggcg accccctgct tcagggggcg gggcggatcc gtgtcgagat
      601 ggatcttgcc gtgggggaag agggccacca cctcccccgc cttcagcacc cggagggcct
      661 cgcggaaggc ccgctcgggg cgctcgctcc ggtccacggg gatgcagccc gcggcgcgaa
      721 agagccattc gaggccgaag cggtggtact gctccttggc gatgatgaag cgcagggggc
      781 ggcggctggc ggcaatgagc agcagcgggt cgagcccgga gatgtggttg gccaccagca
      841 gcgccgggcc gctttcaggg agcggcaggc actcggccga gaggcggtgc cagcggcggc
      901 agaagatccg gttgagcccg tcgatccggt tgacccactt gccgccccag tcggccccgg
      961 cggcccgatc gagcgcccgc atggcggcgc gccaggcgaa caccaggagt gcaaggagaa
     1021 ccgcggagga aaacaggttc atgatcctct gcggttcaca ccttttcctg cttcttcggt
     1081 tcctggtaga ccttgcggcg gaagaggtcg ttgcggcgcg agaccagccg gtcgaggaag
     1141 agcatcccgt ccaggtgatc cagttcgtgc tgcaccgccc gggcctcgaa gccctcgaag
     1201 gcatactcca tcttctcgcc ctgctcgttc tgcgcggcca gggtgatgtg ggtggcgcgg
     1261 atcacgttgc cggtgtagtc gggcaccgac atgcaccctt cgcggcccac ctccatccct
     1321 tcccaggtga gcagttccgg attcaccagc accagccgcc cgtggttcgg gacgggcttg
     1381 cgcgtgaccg aacaatcgac gatcaccacc cgctggaaac ggccgacctg cggcgccgcg
     1441 atgcccacgc cgccggggcc ggcgcgcatg gtctcttcca gatcggcaat aaaggcgtgc
     1501 agctccgcgt caaagcgttc aacgggctcc gactcgcgct gcagccgctc gtcgggatag
     1561 gtcagtatct ccagaatcgc cattattcaa ccgtcttggg aaaaaacacc aacacagagc
     1621 cacagaggac acagaggctc tctgtgatct ctgttcctct gtgcctctgt gttgggttgt
     1681 tatccatcgt cttcgtcagc cgaacagggt ctcgatggag ctcagcttca cgttgatccc
     1741 ttccgccgcc accacgtcga gggccgattg cagggcctcg acaccctcgc gcgccatgcc
     1801 ttcgatctgc atgatgtaga tcggcttgtc ggcgctgccg gccacgtccg attccaggtc
     1861 ggtcacgtcg aggcccgcct cggcgagggc gcccgtgacc ttggcgacga tgccggcgcg
     1921 atcggcgccg tagacagtga tgcgcacgtc gggaacgtgg tggcggtgga gcccgccttc
     1981 aatgcgatcc acgtggtagt ggaggccgag cgaatcggcc accggttcca ccaggtccat
     2041 cagctgtttg gcggtgccct cgtagctcac catcagcatg atggagaagt tgccgccgag
     2101 ccgcatcatg gaggcctcgc ccaggttgcc gccgccctcg aacagggccg agctcacctt
     2161 ggccacgatg cctggccgat ccttgccgac cagggtcagc atgtaccact tgctcatcga
     2221 actctctccc ccgccgctca gtgcaggaca atctcggaaa cgtagatggt ggcgacaccg
     2281 gccaggatca acgccgcctg ctgcagcgtc gcccgcacgt tcaccttgcg gtgcaggccc
     2341 gggatcaggt ccgccacggc aatatagatg aagctcgcgg ccgccacggc caccacataa
     2401 ggcaccgccg cctgcacatc gctcaacgta agccacgcca gcaccgcgcc gaggatggtg
     2461 gtcaggctgg agagcatatt gaagacgaag gcgcgggcgg tggtgaaacc gctgtgcagg
     2521 aggatggcga aatcacccac ctcctgcggg atctcgtggg ccgccaccgc gatggcggtg
     2581 aggatgccca actgggcatc ggtcaggaag gcggcggcga tcagcacgcc gtccacgaag
     2641 ttgtggatgc cgtcgccgac caggatcagc acacccgagg catgggaacc gtgcgtatga
     2701 acatgggcgc ccccttcgca cacctcgtcg tggcagtggt gccacaggac gaacttctcc
     2761 agcagaaaga agccgaacag ccccgccagc accgtggcga agatggcggg cgcctgttcc
     2821 gcgccggcgc tctcgatggc ctcggggagg agccccagga aggcggcgcc gagcatcgcg
     2881 ccgatggcat agctgacgaa gtggggcaac acgtgggtgc gccagcgctc cggcaacagc
     2941 aggaagaccc cggccgccgc cacgctgagc aggcccccga gcagggagaa cagcaccacc
     3001 tgggccagca gactcatgga actccgttca aaaccgggtg aaagaggagg ggcatcatac
     3061 caaagccggc cacc
//
LOCUS       DATGWW010000499         2519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_154236, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000499 DATGWW010000000
VERSION     DATGWW010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154236"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="VK150_07250"
     CDS             <1..182
                     /locus_tag="VK150_07250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31140.1"
                     /translation="DTQLVAPLVIGDGALIGAGSTITKDVPGDALALSRTPQTSKEGG
                     ASKLRLRQKQGSGVS"
     gene            203..979
                     /locus_tag="VK150_07255"
     CDS             203..979
                     /locus_tag="VK150_07255"
                     /inference="COORDINATES: protein motif:HMM:TIGR00056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLP31141.1"
                     /translation="MVLTFFDKTGARVLGSLDLAGDFAVLAGRTFAAVFKRPFDGKNL
                     LNQLQALGVNSLPVVVLTSLAVSMVFAVQLAFGFRQFQAEGLASQVEGLAIIRELGPV
                     ITGLMLSGRIGSAMAAELGTMQVTEQIDALECLATDPVHYLFVPRFLAAVVMVPLLTV
                     ISIYVGFWGGYLILVGVEGQSAYVYGNEFYKLLAFRDLRIALIKALVFGMIIALVGCW
                     KGYRTQGGAEGVGNAPTSSVVTSSLWILISDFFLTKLLLV"
     gene            984..1775
                     /locus_tag="VK150_07260"
     CDS             984..1775
                     /locus_tag="VK150_07260"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLP31142.1"
                     /translation="MALIDVVNLSKAFGSKVVLSNVNLQVQEGESLVVLGGSGTGKTV
                     LLRNIMGLLTPDSGHVAIEGKIIAQLKREELFEVRQSIGMCFQMAALFDSMTVFENVA
                     FALRRHTKMTNGEVTARVEECLSMVGMKGTDKLKPAELSGGMKRRVGFARAIALKPKI
                     LLFDEPTTGLDPVMTDVIGRVILDLKHELGVTTITITHDLKSAFEIADRIALLFRGEC
                     IACEPPAAFKVNPHPVIQQFLRGDADGPFLQDPPPPKRKTQEAHS"
     gene            1772..>2519
                     /locus_tag="VK150_07265"
     CDS             1772..>2519
                     /locus_tag="VK150_07265"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HLP31143.1"
                     /translation="MKLETKVGLFFTGAIFLLAVLIFRTEKLEVGGKRNQSERFTYFD
                     QVAGLNLQSAVRIAGVKVGDVRTIALENGKARVVIGLGNEIQVYRDATVSLGSIGILG
                     EKFIDLDPGHSAKGPFPDDKPLPSKAGVSLDNLMETLADIGKNVKGVTQSLNESIGGE
                     QGRQKLDEIVDNIRVLTAEFRSMAQENHGAINQTMANVEAITSDLRDKLPKLAQQFET
                     VGKNLNAILEENRPELKGVMGDVRKLAQSFQ"
BASE COUNT          446 a          861 c          776 g          436 t
ORIGIN      
        1 ccgacaccca actggtggct ccactcgtca tcggggacgg tgcactcatc ggggccggca
       61 gcaccatcac caaggatgtt ccgggcgacg ccctcgccct cagtcgcaca ccgcagacct
      121 cgaaggaagg cggcgcctcc aagctccgcc tccggcagaa gcaggggagt ggggtaagct
      181 agtcttttgc atccggagca tcatggtcct caccttcttc gacaagaccg gcgcccgtgt
      241 actcggttcg cttgatctcg ctggggattt cgccgtgctg gccgggcgga ccttcgccgc
      301 cgtgttcaag cgcccctttg acggcaagaa cctcttgaac cagctgcagg ccctcggggt
      361 gaactccctc ccggtggtcg tgctcaccag cctcgccgtg agcatggtgt tcgcggtgca
      421 gctggccttc ggcttccgcc agttccaggc cgagggcctg gcctcccagg tggagggcct
      481 ggccatcatc cgcgagttgg ggccggtcat cacgggcctc atgctctccg gccgcatcgg
      541 ctcggccatg gccgcggagc ttggcaccat gcaggttact gagcagatcg atgccctcga
      601 atgcctggcc accgatcccg tgcactacct cttcgtgccg cggttcctgg ccgccgtggt
      661 gatggttccc ttgctgacgg tcatctccat ctacgtcggc ttctggggcg gctacctgat
      721 cctggtgggc gtggaaggcc agagcgccta cgtctacggc aacgagttct acaagctcct
      781 ggccttccgc gacctccgca tcgccctgat caaggccctg gtgttcggga tgatcatcgc
      841 gctggtcggc tgttggaagg gctaccgcac ccagggcggt gccgagggcg tgggcaacgc
      901 acccacgagc agcgtcgtga ccagcagcct gtggatcctc atttccgatt tctttctgac
      961 caagcttctg ttggtgtgac ggcatggccc tgatcgatgt cgtcaacctg tccaaggctt
     1021 tcggttcgaa ggtcgtgctg tccaacgtga acctccaggt gcaggagggc gagagcctcg
     1081 tggtcctggg cggctccggc acggggaaga ccgtgctgct gcgcaacatc atgggcctgc
     1141 tgaccccgga ttccgggcac gtcgccatcg agggcaagat catcgcgcag ctgaagcggg
     1201 aagagctgtt cgaggtgcgc cagagcatcg gcatgtgctt ccagatggcc gcgctgttcg
     1261 attccatgac cgtcttcgag aacgtggcct tcgccctgcg gaggcacacc aagatgacga
     1321 acggcgaggt gaccgcccgg gtggaggagt gcctctccat ggtgggcatg aagggcaccg
     1381 acaagctcaa gccggccgag ctctccggcg gcatgaagcg gcgcgtgggc ttcgcccggg
     1441 ccatcgccct caagcccaag atcctgctct tcgacgagcc caccacgggc ctcgaccccg
     1501 tgatgaccga cgtcatcggc cgcgtgatcc tggacctcaa gcacgagctg ggcgtcacca
     1561 ccatcaccat cacccacgac ttgaaatcgg ccttcgagat cgccgatcgc attgccctgc
     1621 tgttccgcgg cgagtgcatc gcctgcgagc cgcccgcggc cttcaaggtc aacccgcacc
     1681 ccgtcatcca gcagttcctg aggggggacg cggatggccc cttcctccag gacccgcccc
     1741 cgcccaaacg aaaaactcag gaggcccatt catgaagctc gaaaccaaag tcggcctctt
     1801 cttcaccggc gccatcttcc tgctcgccgt gctgatcttc cgcaccgaga agctggaggt
     1861 cggcggaaag cgcaaccagt ccgagcggtt cacctacttc gaccaggtgg ccggcctgaa
     1921 cctgcagagc gccgtgcgca tcgccggcgt gaaggtgggc gacgtccgga ccatcgccct
     1981 cgagaacggg aaagcccgcg tggtgatcgg actcggcaac gagatccagg tctaccggga
     2041 cgccaccgtg tcgctcggct ccatcggcat cctcggcgag aagttcatcg acctcgatcc
     2101 cggccacagt gccaagggtc ccttccccga cgacaagccc ctccccagca aggccggcgt
     2161 cagcctcgac aacctcatgg agaccctggc cgacatcggg aagaacgtga agggcgtgac
     2221 ccagtccctg aacgaatcca tcggtggtga acagggccgc cagaagctcg acgagatcgt
     2281 ggacaacatc cgcgtgctca ccgccgagtt ccgttccatg gcccaggaga accacggcgc
     2341 catcaaccag accatggcca atgtcgaggc catcacctcc gacctgcggg acaagctgcc
     2401 caagctggcg cagcagttcg agaccgtcgg caagaacctc aacgccatcc tcgaggagaa
     2461 tcggccggag ctgaagggcg tcatgggcga cgtgcgcaag ctggcccaga gcttccagg
//
LOCUS       DATGWW010000500         1515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_446842, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000500 DATGWW010000000
VERSION     DATGWW010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446842"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..644)
                     /locus_tag="VK150_07270"
     CDS             complement(<1..644)
                     /locus_tag="VK150_07270"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HLP31144.1"
                     /translation="MGNWDLAIALDRANPEPLYLQLVKALEEGIRLGRFKPGDALPGT
                     RALAELLGVNRNTTLAAYKELEAEGWIEVAPDRGTFVARKLPFVLEVPAGISAQDSAS
                     WKRPTPRSEPFFQPGAPALESFQLIPDTPDLRLAPTDAIHRAYGRVLKLHPERLLQPG
                     WDPRGLLDLRNSLCKMLRDMRALSVEAGNLLLTRGPMSTLNLVSRVLFQPGDAVA"
     gene            1041..>1515
                     /locus_tag="VK150_07275"
     CDS             1041..>1515
                     /locus_tag="VK150_07275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31145.1"
                     /translation="MPLLVAALTLGRATAFGQEAAPFQPDTRPWWQPSWEVVFRGDRL
                     EDPGAPAESFRRVQGQLRLRWTWEREELRLTGGLRAAMGSDGNRFNAPRWDQQPSNGT
                     QVDVLHGSYGWVSAQSFGTLTLGFQENGLVTSQALWDRNLRLLGAGGRVGLRSAEG"
BASE COUNT          223 a          488 c          569 g          235 t
ORIGIN      
        1 gccacggcgt caccgggctg gaacagcacc cgggagacga ggttgagggt gctcatgggg
       61 ccgcgggtga gcagcaggtt gccagcctcg acggaaaggg cccgcatgtc gcgcagcatc
      121 ttgcagagcg agttccggag atcgagcagc ccgcggggat cccagcccgg ctgcagcagc
      181 cgctcggggt gcagcttcag cacccggccg taggcccggt ggatggcgtc ggtgggcgcg
      241 aggcggagat cgggcgtatc cgggatcagc tgaaaggatt ccagggccgg ggctcccggc
      301 tggaagaagg gctcgctgcg gggggtgggg cgcttccagg aggcagagtc ctgggcggag
      361 atgcccgcgg ggacttccag gacaaagggc agcttgcgcg ccacgaaggt gccccggtcg
      421 ggcgcgacct cgatccagcc ttccgcttcc agttccttgt aggccgcgag ggtggtgttg
      481 cggttgacgc ccagcagctc cgccagtgcg cgggtccccg gcagggcatc cccgggcttg
      541 aagcgcccga ggcggatgcc ctcctcgagg gctttcacca gctggaggta cagcggctcc
      601 ggattggccc ggtccagcgc gatggcgaga tcccagttgc ccaaaaggtt gctccgagtg
      661 ttgggatcag aatcccgtcc aggaatggga gcgtcaaggc tgccgcagtt caggccccgc
      721 gatcaccgtc tgcgtccggg ccggcggccg gccgggggcg gcaggggcat cctcgccagg
      781 tgaaggggat gggcacgggt gcgaggtggt gcatggaggc ctcctggcct tgagggtggc
      841 gccgaacctt ccctgaacgg gagatcaggt tggttgtgga caaccgttgt cgctcagtcc
      901 agcgtcgggc cgccgtcgcg gaacaccaga tccggttccg gattcatggg gcatccggtt
      961 gggtccggtt cctcccgcgg cgtcgaaggg ctaccatcca gtcaagccct cttccccccg
     1021 cgatgtcgaa tctccgccgg atgcccctgc tggtcgccgc cctcaccctc gggcgggcga
     1081 cggccttcgg gcaggaggcg gcccccttcc aacctgacac gcggccctgg tggcagccat
     1141 cctgggaagt cgtcttccgg ggggatcgtc tggaggatcc gggcgcgccc gccgaatcct
     1201 tccggcgcgt ccaggggcag ctccgcctgc gctggacttg ggagcgagag gagctgcgcc
     1261 tgaccggggg gctgcgcgcc gccatgggtt cagacggcaa ccggttcaac gcgccccgct
     1321 gggatcagca gccctccaac ggaacccagg tggatgtctt gcacggcagc tatggatggg
     1381 tgtcggccca atccttcggc accctgaccc tcggcttcca ggaaaacgga ttggtgactt
     1441 cccaggccct gtgggaccgg aacctgcgac tgctgggggc cggcgggagg gtgggcctcc
     1501 gcagcgccga gggac
//
LOCUS       DATGWW010000501         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_84561, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000501 DATGWW010000000
VERSION     DATGWW010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84561"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..1071)
                     /gene="hemE"
                     /locus_tag="VK150_07280"
     CDS             complement(85..1071)
                     /gene="hemE"
                     /locus_tag="VK150_07280"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: protein motif:HMM:NF013381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HLP31146.1"
                     /translation="MQPLLHVLNGNALDKPPVWFMRQAGRFLPEYREVRAKVTFEQLL
                     NDSDLAAEVTLQPIRRFPQIDGAIIFSDILVILDALGCEVTIPEGGPRIGKTLDQIDI
                     NRPLDEKVFEPVCNAIRKVKAALPPKVTMLGFAGAPWTLLAYGIEGKGSKSWAKAKAF
                     IHQNPVLAQKWMDKLADAAARLLNLHIEAGAQGVQLFDTWAGELDADDYATFALPSVE
                     RTLAQVTAAPTLFFARTGYLPDSLNNLPCKGLAVPWQVPISEARRRFPKMVLQGNLDP
                     VMLLAGADTAKRKARAIVDAMKGHPHIFNLGHGLTPETDPAVVGAVLDEVKA"
     gene            complement(1200..>1740)
                     /locus_tag="VK150_07285"
     CDS             complement(1200..>1740)
                     /locus_tag="VK150_07285"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLP31147.1"
                     /translation="ISGFRVAPGGAAERLGITPDMGTYGKIIGGGMPVGLYGGRKDIM
                     GVVAPDGPVYQAGTLSGNPVAMAAGLATMEKLTPAFYATLEANAEKWATAFETIPGLH
                     CPRFGSLLWPLFQDGVRRSDAVKGEAIGTFNRLHKALLGQGVYLPPSGYEVAFLGAAH
                     GEPELAHFKQAVAAVAKDF"
BASE COUNT          287 a          535 c          617 g          301 t
ORIGIN      
        1 ccaccaaggc accaagacac caagaactgc ctgggaagtg attttgtatt tcttggcgcc
       61 tcggcgtctt ggtggtgatc gttatcaggc tttcacttca tccagcaccg ccccgaccac
      121 ggcgggatcg gtctcggggg tgagcccatg gccgaggttg aagatgtggg gatggccctt
      181 catggcgtcc acgatggccc gggccttccg cttggcggtg tccgcgccgg ccagcagcat
      241 gacggggtcc aggttgccct ggagcaccat cttcgggaac cggcgccggg cctcgctgat
      301 gggcacctgc cagggcacgg ccaagccttt gcacggcagg ttgttcagcg aatccggcag
      361 gtagccggtg cgggcgaaga acagggtggg cgcggcggtc acctgggcga gggtccgctc
      421 cacggagggc agcgcgaagg tcgcgtagtc gtcggcgtcc agctcgccgg cccaggtatc
      481 gaagagctgc acgccctggg ccccggcctc gatgtggagg ttcagcaatc gcgccgcggc
      541 gtccgccagc ttgtccatcc atttctgggc cagaaccgga ttctggtgga tgaaggcctt
      601 ggccttcgcc cagctcttgc tgcccttccc ctcgatgccg taggccagca gggtccaggg
      661 cgcgccggca aacccaagca tggtgacctt ggggggcagc gcggccttca ccttgcggat
      721 ggcgttgcag acgggctcga agaccttctc gtccagcgga cggttgatgt cgatctggtc
      781 cagcgtcttg ccgatgcggg gcccgccctc ggggatcgtg acctcgcagc ccagggcgtc
      841 caggatcacc aggatgtcgc tgaagatgat ggcgccgtca atctgcggaa agcggcggat
      901 gggctgcagc gtgacttccg ccgccaggtc cgaatcgttc agcagctgct cgaaggtgac
      961 cttggcccgc acctcgcggt actccggcag gaagcgaccc gcctggcgca tgaaccagac
     1021 tgggggcttg tcgagggcgt tgccgttgag cacatgaaga agaggctgca tgaaaactcc
     1081 aacatcaaaa gcaaggggtc cacagattgc acagatttca cagattgaaa agcaggcgga
     1141 tcaagtagac atcagtgttt gcggcagttg aatctgtgtg aatctgtgaa atctgtggat
     1201 caaaaatcct tggcgacggc cgccacggcc tgcttgaagt gggccagctc gggttcgccg
     1261 tgggcggcgc cgaggaaggc cacttcgtag ccgctgggcg gcaggtagac gccctggccc
     1321 agcagggcct tgtgcaggcg gttgaaagtg ccgatggcct cgcccttcac ggcgtcgctg
     1381 cggcggacgc cgtcctggaa cagcggccag agcaggctgc cgaagcgggg gcagtggagg
     1441 ccggggatgg tctcgaaggc cgtcgcccac ttctcggcgt tggcttcgag ggtcgcgtag
     1501 aaggccgggg tgagcttctc catggtggcg aggcccgcgg ccatggccac ggggttgccc
     1561 gagagggtgc ccgcctggta gaccgggccg tccggagcga ccacgcccat gatgtccttg
     1621 cggccgccgt agaggcccac gggcatgccg ccgccgatga tcttgccgta ggtgcccatg
     1681 tccggggtga tgcccaggcg ctccgccgcg ccgccggggg ccacgcggaa gccgctgatg
//
LOCUS       DATGWW010000502         1678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_311382, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000502 DATGWW010000000
VERSION     DATGWW010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311382"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..624
                     /locus_tag="VK150_07290"
     CDS             <1..624
                     /locus_tag="VK150_07290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31148.1"
                     /translation="ELSRAHGFRILEGDSSLGFHREKNPGLPLASEDVHGRVLYFSSL
                     EQILAPGLQVGFLAGEASLIKALAQQRQLVDWPGNLVQEATIEETLRDGEIVRHLRRI
                     RKVTDERRETMVDRLLLHLHPAISVRNPREGLSLWLRVAEDVPLEAWIERCLAHGVVF
                     YPGALYDLNRQDLPYICLGFAAHDLDEQNEACARMALALKEARARRG"
     gene            745..1212
                     /locus_tag="VK150_07295"
     CDS             745..1212
                     /locus_tag="VK150_07295"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HLP31149.1"
                     /translation="MPSTLQHSALTPSRSAAARLLNLLSRPILGALLLGLLGAAPGQA
                     QAPAAKGKTLQELKAFYQQNCTRCHGLDGSAKSPDGKKLGGLDFTRAAQDFRNLGGPA
                     SEREIRTMIRTIQKGIFFGITMPAWKDQLSPEDSTLMVREVLLKAEAGKAIQP"
     gene            1465..>1678
                     /locus_tag="VK150_07300"
     CDS             1465..>1678
                     /locus_tag="VK150_07300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31150.1"
                     /translation="MAKAPSNRHLTLSVSAPLLDAQGTETRPATMAYAFSQGGRSVGF
                     AAMDAKGQATFDVALGEGPTGLRVLVG"
BASE COUNT          267 a          615 c          537 g          259 t
ORIGIN      
        1 gagctctcgc gggcccacgg cttccgcatc ctggagggag attccagcct gggcttccac
       61 cgggagaaga atccgggcct gcccctggcc agcgaggacg tgcacggccg ggtgctctac
      121 ttcagcagcc tcgagcagat tctcgcgccg gggctgcagg tgggcttcct cgcgggcgag
      181 gcgagcctca tcaaggccct cgcccagcag cgccagctgg tggattggcc cggcaacctc
      241 gtgcaggagg ccaccatcga ggagaccctg cgcgacggcg agatcgtgcg gcacctgcgc
      301 cgcatccgga aggtcaccga cgagcgccgg gagaccatgg tggatcgcct gctgctgcac
      361 ctgcatcccg ccatctccgt ccggaacccc cgggagggcc tgtccctctg gctccgggtg
      421 gccgaggacg tgccgctgga ggcctggatc gagcgatgcc tcgcccatgg tgtggtcttc
      481 tacccgggcg cgctctacga cctgaaccgc caggacctgc cctacatctg cctcggcttc
      541 gcggcccacg acctcgacga gcagaacgag gcctgcgccc gcatggcgct cgccctgaag
      601 gaggcgcggg ctcggcgggg ctgacaccgc ggccggactg gtccccttct cggaaccgga
      661 tctggtggca ggtccccagg gcttgatcat ggcggaacgg gttccccacc cttgggaacc
      721 cgcatccggc cacaaggaga ggacatgcca tccaccctgc aacactccgc cctcaccccc
      781 tcgaggtccg ccgccgcgcg cctcctgaac ctcctttccc ggccgatcct tggcgccctg
      841 ctgctgggcc tcctcggggc cgcccccggc caggcccagg cccccgccgc gaagggcaag
      901 accctccagg agctgaaggc cttctaccag cagaactgca cccgttgcca cggcctggac
      961 ggctccgcca aatcccccga cggaaagaag ctcggcggcc tcgacttcac gcgcgcggcg
     1021 caggacttcc ggaacctggg cggccccgcc tcagagcgcg agattcgcac catgatccgc
     1081 accatccaaa aaggcatctt cttcggcatc accatgccgg cctggaagga ccagctcagc
     1141 ccggaggatt cgaccctcat ggtgcgcgag gtcctgctga aggctgaggc gggcaaggcc
     1201 atccagccct agggttggcc ggggtcgcgc cctgggccca ggccgaccca ccctgggtgg
     1261 atggccggca atgcccgttg aatcaaccca ttcggcgact ttcgggagcc cggggctggg
     1321 tcaaggctca gcctcgagtt tcattgcatg ttttttccat gttgcagtgt tgcaagagct
     1381 tgctcatttc acatggtctt ggtctgcgcc ttgccatgga gagaggggag gaaccgcctc
     1441 cccctctcat ggaaaggatc cgacatggcc aaggccccct cgaatcgaca cctcaccctc
     1501 agcgtcagcg ccccgctgct cgacgcgcag ggaactgaaa caaggcccgc caccatggcc
     1561 tacgccttct cccagggcgg gcgcagcgtg ggcttcgccg ccatggacgc caagggccag
     1621 gccaccttcg acgtggccct gggcgagggc cccacgggcc tgcgcgtgct ggtgggac
//
LOCUS       DATGWW010000503         2307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_84944, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000503 DATGWW010000000
VERSION     DATGWW010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84944"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..1217
                     /gene="ribB"
                     /locus_tag="VK150_07305"
     CDS             114..1217
                     /gene="ribB"
                     /locus_tag="VK150_07305"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HLP31151.1"
                     /translation="MGNRTDSPFASIEEAIEAIRQGRMVVVVDDEDRENEGDLTMAAE
                     HISPEAIAFMATHGRGLICVALEGAQLDKLQIPLMVRDNTSPFETAFCVSVEAREGTT
                     TGISAHDRSRTIQALIAPEAKPQHFVKPGHVFPLRARPGGVLTRTGQTEASVDLARLA
                     GVHPSGVICEIMKDDGTMARVPDLVPFCRQHGLPLVTVADLVAYRLRQEPLVKQLEVR
                     AMPSVWGELKVHRFQSLLDGGSHLAFVLGNLAEAEAPLVRVHVETLPDDLHGFETGLF
                     QKAMAALAKEGRGALVYLRRHAHTPGVAEEGPAQPQVMSDRDFGVGAQILRQLGIGKM
                     RLLSRHETKYIGLRGFGLDLCAHVPLEPPADPR"
     gene            1214..1708
                     /locus_tag="VK150_07310"
     CDS             1214..1708
                     /locus_tag="VK150_07310"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HLP31152.1"
                     /translation="MIDAQFLTQSPLFRNLDETERAQILIIGRITPYKAGQVIFREGD
                     AGDGLFMVVKGSVRISKRSVTGEEALAVLEPPAFFGEMALIDFSARAADAIANEDSQL
                     FFIPLQELRSLIEAQHKIALKILYALCEVLAQRLRETNERYMNIFTIAQWGGANPDGP
                     IPVP"
     gene            1726..2046
                     /gene="trxA"
                     /locus_tag="VK150_07315"
     CDS             1726..2046
                     /gene="trxA"
                     /locus_tag="VK150_07315"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HLP31153.1"
                     /translation="MSDLVAHITDSEFPTAVANGVTLVDFWAPWCGPCKMIAPVLDEL
                     AAEMQGKAKFVKMNVDENPQVAGQFGIMSIPTLIVFKDGKPVNKLIGGQPKPQLKAFV
                     ESAF"
     gene            complement(2098..>2307)
                     /locus_tag="VK150_07320"
     CDS             complement(2098..>2307)
                     /locus_tag="VK150_07320"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP31154.1"
                     /translation="VRLAMDTERFELEISDEGPGFDASRISPLPKDSEVGSHCGRGLP
                     LILLVMDEVHFNDKGNQIRMVLRRK"
BASE COUNT          389 a          847 c          702 g          369 t
ORIGIN      
        1 cctgggacat gggctgttcc tctcggaaga tggaggggcg taaagggatg accaacctta
       61 ccacggagtg cgcccttccc cccggggtcc tcctgagcga tgctgggggt cctatgggca
      121 atcgtaccga ctcccccttc gcctccatcg aggaggccat cgaggccatc cgccagggcc
      181 ggatggtcgt ggtggtggac gacgaggacc gcgagaacga aggcgacctc accatggccg
      241 ccgaacacat ctcgccggag gccatcgcct tcatggccac ccatggccgg ggactcatct
      301 gcgtggccct cgagggcgcc cagctggaca agctccagat ccccctcatg gtccgggaca
      361 acaccagccc tttcgagacc gccttctgcg tgtccgtcga ggcccgggag ggcaccacca
      421 ccggcatcag cgcccacgac cgctcccgca ccatccaggc cctcatcgcc cctgaggcca
      481 agccccagca cttcgtgaag cccggccacg tcttccccct gcgcgcccgg cccggaggcg
      541 tgctcacccg caccggccag accgaggcca gcgtggacct ggcccgcctt gccggggtgc
      601 atcccagcgg cgtgatctgc gagatcatga aggacgacgg caccatggcg cgggtgcccg
      661 acctggtgcc cttctgccgg cagcacggcc tgcccctcgt caccgtggcc gacctggtgg
      721 cctaccgcct gcgccaggag cccctcgtga agcagcttga ggtccgcgcc atgcccagcg
      781 tctggggcga actcaaagtg caccggttcc agagcctcct ggacggcggc agccacctgg
      841 ccttcgtcct cgggaatctg gccgaggcgg aagcacccct ggtgcgcgtg cacgtggaga
      901 ccctgccgga tgaccttcac ggcttcgaga ccgggctctt ccagaaggcc atggcggccc
      961 tcgccaagga gggccggggc gccctggtct acctccgccg gcatgcccac acccccggcg
     1021 tcgccgagga gggccctgcc cagccccagg tcatgagcga ccgggatttc ggcgtgggcg
     1081 cccagatcct gcgccagctc gggattggaa aaatgcgcct cctcagccgg catgaaacca
     1141 agtacattgg cctccgtggc ttcggcctcg acctctgcgc ccatgtgccc ctggaaccac
     1201 ccgcggatcc ccggtgattg acgcccaatt cctgacccag tctcccctgt tcaggaacct
     1261 ggacgaaacg gagcgtgccc agatcctgat catcgggcgc atcaccccgt acaaggccgg
     1321 gcaggtcatc ttccgcgagg gggacgccgg cgacgggctg ttcatggtgg tgaagggctc
     1381 cgtgcggatc tccaagcgca gcgtcaccgg cgaggaggcc ctcgcggtcc tggagccgcc
     1441 ggccttcttc ggcgagatgg ccctcatcga tttctccgcc cgggccgccg acgccatcgc
     1501 caacgaggat tcccagctgt tcttcatccc cctccaggaa ctccgctccc tgatcgaggc
     1561 ccagcacaag atcgccctca agatcctgta cgccctgtgc gaagtgctcg cccagcgctt
     1621 gcgggagacc aatgagcgct acatgaacat cttcacgatt gcccagtggg ggggcgccaa
     1681 tcctgacggc cccatccccg tcccctgaac ttgaaaggag ttcccatgtc cgacctcgtc
     1741 gcccacatca ccgacagcga gttccccacg gctgtcgcca acggcgtcac cctcgtggat
     1801 ttctgggccc cctggtgcgg cccctgcaag atgatcgccc ccgtcctcga cgagctcgcc
     1861 gccgagatgc agggcaaggc caagttcgtg aagatgaacg tggacgagaa cccccaggtg
     1921 gccggccagt tcggcatcat gagcatcccc acactcatcg tgttcaagga cggcaagccc
     1981 gtgaacaagc tcatcggcgg ccagcccaag ccccagctca aggccttcgt ggaaagcgcc
     2041 ttctagcagc cgccaccatc catggaaacg ccggggcgac ccggcgtttt tcgtggccta
     2101 cttccgccgc agcaccatgc ggatctggtt gcccttgtcg ttgaagtgca cctcgtccat
     2161 caccagcagg atcaggggca ggccgcgccc gcagtgggaa cctacttcgg aatccttggg
     2221 caggggggag atccggctgg cgtcgaaacc cgggccttcg tcgctgatct ccagctcgaa
     2281 gcgttccgtg tccatggcca ggcgcac
//
LOCUS       DATGWW010000504         2196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_37268, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000504 DATGWW010000000
VERSION     DATGWW010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37268"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VK150_07325"
     CDS             complement(<1..216)
                     /locus_tag="VK150_07325"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF014588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HLP31155.1"
                     /translation="MTAIRVGQGFDVHRFSAPEEGRPLMLMGCDIPHDRGLAGHSDAD
                     VMLHALMDALLGAAGLGDIGHHFPDTDP"
     gene            complement(213..1739)
                     /locus_tag="VK150_07330"
     CDS             complement(213..1739)
                     /locus_tag="VK150_07330"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP31156.1"
                     /translation="MAQRYQLLIRDRHGFERTVPLTRSVTLGRQSLCDVVLSDSMISR
                     NHLRLELRDDIWWAEDLQTTHGSFYKDQQLGRVPWEIGTPLRLADGAYTLTLLSTNQS
                     SSELHLQAILETAQLLAEEVDLEDLLDQSMDRLLSISGTDRGFLMLLENGELTTKVQR
                     NLGQELEGSIQLSLSSVHKVFETGDPVWILNVADEYHLQHQHSIQRLELKTILCLPLV
                     LQGRRLGVVYLDSRRPITEPPDRETFEAIVALCAIAIERTRLSEENLRSHVLATVGQV
                     ASSIVHDFKNGLFVLRGHADLLELSTEDHKIRHHCRKILECVDRLTHLSQDVLDFAKV
                     REPNRETVELRSFLDAILEPMVPRAAELGVQLRAEGPACKVKLDPARFTRVMENLMAN
                     ALDATKDMSGEVLVSWTQVTGGVQIHVRDLGQGIPRKVIKRIFEPFFSYGKKKGTGLG
                     MATVKKIVEEHGGTLEFISEEGVGTEVIITLPEHPITGTIKVLDESTGNHRAIGAEGA
                     "
     gene            1854..>2196
                     /locus_tag="VK150_07335"
     CDS             1854..>2196
                     /locus_tag="VK150_07335"
                     /inference="COORDINATES: protein motif:HMM:NF017321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLP31157.1"
                     /translation="MHRHPDLDPTGGAEDPAEFSLRPQRLQEYIGQDKVKARLEIALL
                     AAQRRGEVLDHVLLFGPPGLGKTTLAHVLANEMGAPCKVIQAPALEKKGDLAAILTNL
                     DEGEFLFIDEIH"
BASE COUNT          347 a          671 c          789 g          389 t
ORIGIN      
        1 ggggtcggtg tcggggaaat ggtggccgat gtcgccgagg cccgcggcgc cgagcagcgc
       61 gtccatgagc gcgtggagca tcacgtccgc gtcgctgtgc cccgccaggc cccggtcgtg
      121 ggggatgtcg cagcccatga gcatgagggg cctgccctcc tcaggtgcgg agaagcggtg
      181 gacatcgaag ccctggccga cccggatggc ggtcatgcgc cctccgcccc gatggcgcgg
      241 tggttgccgg tggattcgtc cagaaccttg atggtgcccg tgatggggtg ttcgggcagg
      301 gtgatgatca cttcagtgcc cacgccctcc tcgctgatga actcgagggt gccgccatgt
      361 tcttcgacga tcttcttcac cgtggccatg ccgaggcccg tccccttctt cttcccatag
      421 ctgaagaagg gctcaaagat gcgcttgatg accttccggg ggatgccctg gcccaggtcg
      481 cgcacgtgga tctgcacgcc gccggttacc tgggtccacg acacgagaac ctcgccgctc
      541 atgtccttgg tggcgtcgag ggcgttggcc atgaggtttt ccatgacccg ggtgaaccgg
      601 gccggatcga gcttcacctt gcaggccggc ccctccgccc ggagctgcac gcccagttcg
      661 gcggcgcggg gcaccatcgg ttcgaggatg gcatcgagga agctgcgaag ctccacagtc
      721 tcccggttgg gctcgcggac cttggcgaag tcgagcacgt cctggctgag gtgggtgagg
      781 cggtccacgc actcgaggat cttccggcag tggtggcgga tcttgtggtc ttcggtggag
      841 agctccagca ggtccgcgtg accgcggagc acgaacaggc cgttcttgaa gtcatggacg
      901 atggagctgg ccacctggcc cacggtggcg agcacgtggc tgcggaggtt ctcctcggag
      961 agccgggtgc gctcaatggc gatggcgcag agggcgacga tggcctcgaa ggtctcccgg
     1021 tcgggcggct cggtgatggg ccggcggctg tcgaggtaga ccacgccgag gcgccggccc
     1081 tggaggacca gggggaggca gaggatggtc ttcagctcga gccgttggat ggaatgctgg
     1141 tgctgcaggt ggtattcgtc ggccacgttg aggatccaca ccgggtcgcc cgtctcgaac
     1201 accttgtgga cgctggagag ggagagctgg atgctgcctt ccagctcctg gcccaggttg
     1261 cgctgcacct tggtggtgag ctcgccgttc tcgagcagca tgagaaagcc gcggtcggtg
     1321 ccggaaatgg acagcaggcg gtccatggac tggtcgagca ggtcttcgag atccacctcc
     1381 tcggccagca gctgggcggt ctccaggatg gcctgcaggt ggagttcgga gctgctctgg
     1441 ttcgtgctga ggagggtcag ggtgtacgcc ccgtccgcga ggcgcagggg cgtgccgatc
     1501 tcccagggca cccggcccag ctgctggtcc ttgtagaagc tgccgtgggt ggtctgcaag
     1561 tcctcggccc accagatgtc gtcccgcaac tccagccgca ggtggttccg gctgatcatg
     1621 ctgtccgaga gcaccacgtc gcagaggctc tgccggccca gggtcaccga ccgggtgagg
     1681 gggaccgtgc gctcgaaacc gtggcggtct cggatcagga gctggtagcg ctgggccaca
     1741 gcttctcccg tgggatcagg aatggaggtg ggatggggct tcgactgcgt gaacccaaga
     1801 ttatccgccc accggctgga cacaagtgga agtcccgtga gggaatagag tccatgcacc
     1861 gacaccctga cctcgatccc acaggcggcg ccgaggaccc ggcggaattc tctttgcggc
     1921 ctcagcggct tcaggaatat atcggccagg acaaggtgaa ggcccgattg gagatcgcgc
     1981 tcctggccgc ccagcgccgg ggggaggtgc tggatcacgt gctgctcttc ggcccgccgg
     2041 gcctcgggaa gaccaccctg gctcacgtgc tggccaacga gatgggggct ccctgcaagg
     2101 tgatccaggc gccggccctg gagaagaaag gcgacctggc ggccatcctc accaacctgg
     2161 acgagggcga attcctgttc atcgacgaga tccatc
//
LOCUS       DATGWW010000505         2910 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_311521, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000505 DATGWW010000000
VERSION     DATGWW010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2910
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311521"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..814)
                     /gene="rhlP"
                     /locus_tag="VK150_07340"
     CDS             complement(<1..814)
                     /gene="rhlP"
                     /locus_tag="VK150_07340"
                     /inference="COORDINATES: protein motif:HMM:TIGR04179.1"
                     /note="RhlP (RHombo-target LipoProtein) is a family of
                     predicted lipoproteins that, in general, co-occurs with a
                     form of rhombosortase, and that has an apparent cleavage
                     site for that enzyme, a GlyGly motif, near the C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhombotarget lipoprotein"
                     /protein_id="HLP31158.1"
                     /translation="MKSSILSLLAALLLLAAGCGTPETVQRRSSLTAYLAGKEAAPAA
                     PTTEPARLQLPLRLGIAFVPNDATTRTGNAGLGTGPEGIFSPDQEMALQQKVADVFQA
                     KPWTHTFKVIPSHYLTRDGGFKDLDQVSRAFGVEVIALVSVDQIQFSSPRWYAWTYWT
                     LVGAYMVKGDKNDTTTLVDAAVYHVPSRTFLFRAGGVGTVKGSGTWSGREEAFRKQSR
                     ESLALAMGELSASLDQGVATFKQDLLKGTRKDVLLLDKDGNPLGSAAYDPTRR"
     gene            899..1501
                     /locus_tag="VK150_07345"
     CDS             899..1501
                     /locus_tag="VK150_07345"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HLP31159.1"
                     /translation="MTVPKKKARPTAPLTREAWVKAAMNLLAQEGVAAVAVEPLAQAL
                     GVTKGSFYWHFRNRDELIQACLEAWEQDQSADVVSRYSGIPDPRRRLRVLLFAAFEDV
                     ENGKFFAALTVSAEDPRIEPTLRRATERRLAFGMEAFQALGLSPDEAQERALLAYAAY
                     TGYFQLLRTTPRAVAAVTDLSGFVRRLADALVPAKENRRA"
     gene            1553..2077
                     /locus_tag="VK150_07350"
     CDS             1553..2077
                     /locus_tag="VK150_07350"
                     /inference="COORDINATES: protein motif:HMM:NF018525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HLP31160.1"
                     /translation="MTPILMVPGYQNSGPGHWQSLWEDEMPGVRRVEMPSWEHPVAGE
                     WIQTLDEAIADCGEAPILVGHSLGCIAIVRWAAEHQREVLGALLAAPADVDRPDGLEE
                     LRPFGPIPRLRLPFPAIVASSSDDPFMAVDRARGFAADWGARFVELGPCGHLNRTSGH
                     GPWIRGEALLAELR"
     regulatory      2102..2277
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00168"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Lysine riboswitch is most abundant in Firmicutes
                     and Gammaproteobacteria where they are found upstream of a
                     number of genes involved in lysine biosynthesis, transport
                     and catabolism; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="lysine"
                     /db_xref="RFAM:RF00168"
     gene            2339..>2910
                     /locus_tag="VK150_07355"
     CDS             2339..>2910
                     /locus_tag="VK150_07355"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HLP31161.1"
                     /translation="MNASPADPRRWLTARLMALCATETTSGREDAGLPELRALLQGLG
                     ATVVEQRVAPGRTNVLALWGRPRVLFSTHLDTVPPFVPPRFEREVVWGRGACDAKGQI
                     VAQLAAVKSLLDEGREGLAWLGVVGEETDSAGAAAASALANHFLGLKALINGEPTELK
                     LATGQRGVQHLCLHCSGRAAHSGSPELGHNA"
BASE COUNT          415 a          985 c         1078 g          432 t
ORIGIN      
        1 agcggcgggt gggatcgtag gcggcgctgc ccagggggtt cccatccttg tcgagcagca
       61 gcacgtcctt gcgggtgccc ttgaggaggt cctgcttgaa ggtggccacg ccctggtcca
      121 gggaggcgga cagttcgccc atggcgaggg ccaggctttc gcgggactgc ttccggaagg
      181 cctcttcacg gccggaccag gtgccgctgc ccttgacggt gcccacgccc ccggcgcgga
      241 agaggaaggt gcgggaaggc acgtggtaga ccgcggcgtc caccagggtg gtggtgtcgt
      301 tcttgtcccc cttcaccatg taggcaccca ccagggtcca gtacgtccag gcgtaccacc
      361 gggggctgct gaactggatc tggtcgacgc tgaccagggc gatcacctcc accccgaagg
      421 cccgggagac ctggtcgagg tccttgaatc cgccgtcccg ggtgaggtag tggctgggga
      481 tgaccttgaa ggtgtgggtc cagggcttgg cctggaagac atccgcaacc ttctgctgga
      541 gggccatctc ctggtcgggg gagaagattc cctccggccc ggtgcccagg cccgcgttcc
      601 ctgtgcgggt ggtggcgtcg ttgggcacga aggcgatgcc caggcgcagg ggcaactgca
      661 gccgggcggg ctcggtggtc ggggcggcgg gggccgcctc cttccccgcc aggtaggcgg
      721 tgaggctgct gcggcgctgg acggtctcgg gggtgccaca acccgcggcg agcaggagga
      781 gggcggcgag gagcgacagg atggaggatt tcatgggacc tcctggggca gtacgcttgc
      841 gtatggtgtc catacggtat ggtatggtaa acttgacgga ccacctgtca agggcgccat
      901 gaccgttccc aagaagaaag cccgacccac tgccccgctc acgcgggagg cctgggtgaa
      961 ggccgccatg aacctgctgg cccaagaggg tgtggcggcc gtggcggtgg agccgctcgc
     1021 ccaggccctg ggcgtcacca agggcagctt ctattggcat ttcaggaacc gggacgagct
     1081 catccaggcc tgcctcgaag cctgggagca ggaccagagc gccgacgtgg tgagccgcta
     1141 ctcgggcatt cccgatcccc ggcgccgcct gcgcgtgctg ctcttcgcgg ccttcgagga
     1201 cgtggagaac gggaagttct tcgcggcgct caccgtctca gcggaagatc cccggatcga
     1261 gcccaccctc cggcgcgcca ccgagcgccg cctggccttc ggcatggagg ccttccaggc
     1321 cctgggtctc tccccggatg aggcccagga gcgggccctg ctggcctacg cggcctacac
     1381 cgggtacttc cagctcctgc ggaccacgcc ccgggccgtg gccgcggtga cggacctgag
     1441 cggcttcgtg cggcgtctgg cggacgcgct ggtgccagcc aaggagaacc gccgcgcttg
     1501 atcgagaccg ggttcaggcg tttcatgaag gcacccgtcc cgaggcaccc cgatgacacc
     1561 catcctgatg gttcccggct accagaactc cggtcccggc cactggcaga gcctctggga
     1621 agacgagatg cccggagtcc ggcgcgtgga gatgcccagc tgggaacatc cggtggcggg
     1681 cgagtggatc cagaccctgg acgaggccat cgccgactgc ggcgaagccc ccatcctcgt
     1741 gggccattcc ctgggctgca tcgccatcgt ccgctgggcg gcagagcacc agcgggaggt
     1801 cctcggcgcg ctgctggcgg cgccggccga cgtggaccgg cccgatggcc tggaagagct
     1861 gcgtcccttc gggcccatcc cgaggctacg cctgcccttc cctgccatcg tggcctcttc
     1921 cagcgacgac cccttcatgg cggtcgaccg ggcgcggggt ttcgcggccg actggggcgc
     1981 ccgcttcgtg gaactgggcc cctgtggcca cctgaacagg acttcgggcc acggaccgtg
     2041 gatccggggc gaggccctgc tggcggagtt gcgctaggcg gccgggccgt gggaaggtgg
     2101 agcttccgat ggaggagcgg tccccatcag taccgacggc gagggggatg accccgatga
     2161 cccggcggga aaggggagga tcgccgaagg gttcgcggct catcgacgcg ccccctggac
     2221 gacgaggcga aagcccggcg gctgtcgtgc cggtcacccg gcgcggaggg cctgaggcgc
     2281 ggcggcggga tccttcccac cgcgttccgc agggcaccgt cggcacgccg aggtttccat
     2341 gaacgcatcc cccgcagacc cccgacgctg gctcacggcc cgcctcatgg ccctgtgcgc
     2401 caccgagacc acctcgggcc gggaggacgc cgggctgccc gagctgcggg cgctgctgca
     2461 gggcctcggg gccaccgtgg tggagcagcg cgtggctccg gggcgcacga acgtgctggc
     2521 cctgtggggc cggccgcggg tgctcttctc cacgcacctc gacaccgtgc cgcccttcgt
     2581 gccgccccgc ttcgagcgcg aagtcgtgtg gggccgcggc gcctgtgacg ccaagggcca
     2641 gatcgtcgcg cagctggcgg cggtgaagtc gctgctggac gagggccgag agggcctggc
     2701 ctggctgggc gtggtcggtg aggagaccga cagtgccggt gccgccgcgg cctccgccct
     2761 ggcgaatcac ttcctggggc tcaaggccct catcaacggc gagcccacgg aactgaagct
     2821 ggcgacgggc cagcgcggcg tgcagcacct ctgcctgcat tgctcggggc gggcggccca
     2881 cagcggcagc cccgagctgg gccacaacgc
//
LOCUS       DATGWW010000506         2153 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_37335, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000506 DATGWW010000000
VERSION     DATGWW010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37335"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..836
                     /locus_tag="VK150_07360"
     CDS             <1..836
                     /locus_tag="VK150_07360"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HLP31162.1"
                     /translation="AVSVLWALSFGLTAQVSGLGAPVVTAARTLLAAAVFLPFLGLKG
                     LSRRQALGFVGIGALQFGLMYLLYIASFRWLRASEVALFTIFTPLFVTLVADLFEGLV
                     SWRFLAAAMLTVLGTAICVWPERGRGGLLLGFLLMQGANLCFALGQVLYRRAAPATGK
                     RDGELMGLLYLGAAGVAVAMALPTLHVDQLGAMSARQAAALVYLGVVASGLGFFLFNA
                     GARRVDIGTLAIFNNLKIPLAILASGLVFREAVDWPRLALGGAVIGAAFALNGLTGAR
                     P"
     gene            833..1426
                     /gene="miaE"
                     /locus_tag="VK150_07365"
     CDS             833..1426
                     /gene="miaE"
                     /locus_tag="VK150_07365"
                     /inference="COORDINATES: protein motif:HMM:NF017939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045301 -
                     tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl
                     adenosine)-hydroxylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase
                     MiaE"
                     /protein_id="HLP31163.1"
                     /translation="MTAFHPPLPLRLETPAAWAEAAIADPEALLSDHAHCEKKAALQA
                     LNFIPSFADTPRSAVLLARLAEEELNHHRRVLEALQTFGWTLRADAGNAYAQALHKLA
                     SKGLLDRLLISALIEARSCERLWLLERAGADHPALGSAPWLAFLLELERCEAGHALGY
                     RSLAEDRFGDAVSARLDWWLDREAEVIRNLPWRSAVH"
     gene            1486..>2153
                     /locus_tag="VK150_07370"
     CDS             1486..>2153
                     /locus_tag="VK150_07370"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HLP31164.1"
                     /translation="MSTVPDHGLKEMVPVFGPEALGVGTHGSFRAALERLSGDGDLKA
                     RLLLSALSHFAAKGYDGVQVKEVAEEAGVSKPTLYYHFGSKEGLFRQLCLVSLASMAV
                     RIQGMVQPFLEAPLGDVKAVDEACLKLSRAYLDLLLEAQEFTGFILRSIAVPSPDSTF
                     RDLMPLVERGLSPLGLFMNHVFGTSLEAARKEVLLFTSLVGSLIEEKLRDPEYQITDA
                     EVAWV"
BASE COUNT          262 a          772 c          735 g          384 t
ORIGIN      
        1 tcgccgtgtc ggtcctctgg gccctctcct tcggcctcac ggcccaggtg agcggcctgg
       61 gcgcgcctgt cgtgaccgcc gcgcggacgc tgctggcggc cgcggtgttc ctcccgtttc
      121 tcggcctgaa gggactctcc cgcaggcagg ccctgggttt cgtgggcatc ggggcccttc
      181 agttcggcct gatgtacctg ctctacatcg cctcgttccg ctggctccgg gcctcggaag
      241 tggcactctt caccatcttc accccgctct tcgtgaccct cgtggcagat ctcttcgaag
      301 gcctcgtgtc ctggcggttc ctggccgcgg cgatgctcac ggtgctcggc accgccatct
      361 gcgtctggcc cgagcggggg cgcggcgggc tgctgctggg gttcctcctc atgcagggcg
      421 cgaacctctg tttcgccctg ggccaggtgc tctaccgccg cgccgcgccc gccaccggga
      481 agcgcgacgg ggagctcatg ggcctgctgt acctcggggc cgccggcgtg gcggtggcca
      541 tggcgctgcc caccctccac gtcgaccagc tgggggcgat gagcgcgcgg caggcggcgg
      601 cgctggtcta cctcggcgtg gtggcctcgg gcctgggctt cttcctcttc aacgccgggg
      661 cgcgccgggt ggacatcggc acgctggcga tcttcaacaa cctgaagatc cccctggcca
      721 tcctcgcctc gggcctggtg ttccgggagg cggtggactg gccgcggctg gccctcggcg
      781 gcgcggtcat cggcgcggcc ttcgccctca acggcctcac gggagcccgt ccatgaccgc
      841 tttccaccct ccgctgcccc tgcgcctcga gacgcccgcc gcctgggccg aggcggccat
      901 cgccgacccg gaggccctgc tttcggacca cgcccactgc gagaagaagg ccgccctcca
      961 ggccctgaac ttcatcccgt ccttcgcgga cacgccccgg tccgcggtgc tgctggcccg
     1021 cctggccgag gaggagctga accaccaccg ccgggtgctt gaggccctcc agaccttcgg
     1081 atggaccctg cgcgccgatg cggggaacgc ctatgcccag gccctccaca agctggcctc
     1141 gaaggggctg ctcgaccgcc tgctcatcag cgcgctcatc gaggcccgca gctgcgagcg
     1201 gctctggctc ctcgagcggg cgggcgcgga ccacccggcc ctgggctcgg cgccgtggct
     1261 ggccttcctg ctggagctgg agcgctgcga ggccgggcac gcgctgggct accggagcct
     1321 ggcggaggat cgcttcggcg acgcggtttc agcgaggctg gattggtggt tggaccgcga
     1381 ggcggaggtg atccggaacc tgccctggcg gtctgcggtc cactaggtcg cttgaccccc
     1441 agtaagggca ttcgtggcat cctggagggt cctccgaggc agcctatgtc caccgttcca
     1501 gaccatggtc tcaaagaaat ggtgcccgtt ttcgggcccg aggcgctggg cgtggggacc
     1561 catggaagct ttcgcgcggc cctggaacgc ctcagcggag atggcgacct caaggcccgg
     1621 ctcctgttgt cggccctctc ccacttcgcg gccaagggct acgacggcgt gcaggtgaag
     1681 gaggtggccg aggaggccgg cgtctcgaag ccgaccctct actaccactt cggcagcaag
     1741 gaaggcctgt tccgccagct ctgcctggtg tcgctggcca gcatggcggt gcgcatccag
     1801 ggcatggtcc agcctttcct cgaagcgccc ctcggcgacg tgaaggccgt ggacgaggcc
     1861 tgcctgaagc tctcccgggc ctacctcgac ctgcttctgg aggctcagga attcacgggc
     1921 ttcatcctgc gctccatcgc ggtgccctcg cccgattcca cgttccgcga cctgatgccg
     1981 ctggtggagc ggggcctgag tcccttgggc ctcttcatga accatgtctt cggcaccagc
     2041 ctcgaggcgg cccgcaagga ggtgctgctg ttcacctcgc tcgtgggctc gctcattgag
     2101 gagaagctgc gcgatcccga atatcagatc accgatgcgg aagtggcgtg ggt
//
LOCUS       DATGWW010000507         2751 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_85086, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000507 DATGWW010000000
VERSION     DATGWW010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85086"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..340)
                     /locus_tag="VK150_07375"
     CDS             complement(<1..340)
                     /locus_tag="VK150_07375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31165.1"
                     /translation="MDPHSPSDQNDRDLAGRVARLEAQVAWLLQRQQAPAPQAAPSPA
                     PGQAHPAPGQTQPAPAAAQGQPLPRPILRPPTPRKEISPVVWIAGIGASIFLFGTIFF
                     FRWAIQQGWVG"
     gene            complement(421..1878)
                     /locus_tag="VK150_07380"
     CDS             complement(421..1878)
                     /locus_tag="VK150_07380"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HLP31166.1"
                     /translation="MTSAAPSTPRALQVLLVDDNPIQLSLLRHLFQRHGHQTIEARNG
                     AEALIVLATEFPDVVVSDCVMPLLDGYQFCRLLKDDRATRHLPVLLLTAQGTGLARFW
                     AKTCGADRFLVKGRDLDHVVEAAAALAEQSSRPRSTHAVPKLAQENFGVDAIQRRLAM
                     ALEQRLVETALRDSIARLYTADHDTPRLIQGFIEILQELVLPGALMVAYLGEDGAWCH
                     GVHGSSTSAEDRQTLEKALAEQGPVQTQTNCHWHPASDDDERRRSLRDPVLRVFTATT
                     PGYPAVGALAFITERRASEDFERLFEIAAEELGRLLSLEDSRLRLYHQAIRDPLTGLY
                     NRKHILDMLSMELDQCGRFGQDLSIMLVDLDHFKAVNDRFGHAVGDQVLSVMAQRMVF
                     GLRKVDQLGRIGGEEFLAYCPQTDLEGARALAERLREQVSVETIPGLPASDRVTLSIG
                     LATWEGPEDTPERLVSRADKALYEAKAQGRNRVVS"
     gene            2041..>2751
                     /locus_tag="VK150_07385"
     CDS             2041..>2751
                     /locus_tag="VK150_07385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31167.1"
                     /translation="MEAPLLLALARAWARDRGDLPVEAVWASGRALGLKWAGRKTAEG
                     WVLLLQPKPELWLLGVDHPAWKRLAGEAPKDSAKLWGPWFQGARLRAVEGDPRERWLG
                     LVLQRRAITGRLESLRLAFQAIPGRPGIRVDGLDTQVPRLGLGTPFPAAAPQPQGDPP
                     PFLRWRDRWGDRLEAALAGEEPDVLGGEGDLLARHRAWSEGRAEELILAPARAAVERR
                     RQAETARMDRLGQALARDR"
BASE COUNT          381 a          888 c         1076 g          406 t
ORIGIN      
        1 cgcccaccca gccctgctgg atggcccagc ggaagaagaa gatggtgccg aagaggaaga
       61 tggaagcgcc gatgcccgcg atccacacca cgggggagat ctctttccgc ggcgtcgggg
      121 ggcggaggat ggggcggggc aggggctggc cctgagcggc cgcgggagcc ggctgagttt
      181 ggccaggtgc cgggtgagct tggcccggtg ccgggctggg cgcggcctgg ggtgcgggcg
      241 cctgctggcg ctggagcaac caggccacct gggcctccag tcgggccacg cgcccggcga
      301 gatcccggtc gttctgatca ctgggggaat gcgggtccat ggcgactcca tacggaagcg
      361 tatggaatca tgcggtcggg tccctgggcc tgtcaagggc gtccggatgc agggcgggaa
      421 tcagctgacg acgcggttcc gaccttgggc cttggcttcg tagagggcct tgtcggcccg
      481 tgacaccagg cgttcggggg tgtcctcggg gccttcccag gtggcgagtc cgatgctcag
      541 cgtcacccgg tcgctggcgg gcaggcccgg gatggtctcc acggacacct gttcccggag
      601 gcgctcagcc agggcccggg ccccttccag gtcggtctgg gggcagtagg cgaggaactc
      661 ctcgccgccg atgcggccca gctggtcgac cttccgcagc ccaaagacca tgcgctgggc
      721 catcacgctg agcacctggt cgcccaccgc gtggccgaac cggtcgttca ccgccttgaa
      781 gtggtcgagg tccaccagca tgatcgacag gtcctggccg aaccggccgc actggtcgag
      841 ctccatgctg agcatgtcga ggatgtgctt gcggttgtag agccctgtga ggggatcgcg
      901 gatggcctgg tggtagaggc ggaggcgcga gtcctcaagg ctgagcaggc ggcccagctc
      961 ctcggcggcg atctcgaaga gccgctcgaa atcctcggaa gcccgccgtt cggtgatgaa
     1021 ggccagggcc cccacggccg ggtagccggg ggtggtggcg gtgaagacgc ggaggaccgg
     1081 atcgcggagg ctgcgccgcc gctcgtcgtc gtcggacgcg gggtgccagt ggcaattggt
     1141 ctgggtctgg acaggcccct gttccgcgag ggccttctcc agggtctggc ggtcctcagc
     1201 gctggtggag gaaccatgga cgccatggca ccacgcgccg tcctcgccca ggtaggccac
     1261 catcagggcg cccggaagca ccagttcctg gaggatctcg atgaagccct ggatcaggcg
     1321 gggcgtgtcg tggtcggcgg tgtagagccg ggcgatggaa tcgcgcaggg cggtctccac
     1381 caagcgctgc tccagggcca tggccagccg ccgctggatg gcgtcgacgc cgaagttctc
     1441 ctgggcgagc ttgggcactg cgtgcgtgct gcggggacgg gaggattgct cggcgagggc
     1501 cgcggcggcc tccaccacat ggtccagatc gcggcccttc accaggaagc ggtcggcccc
     1561 gcaggtcttg gcccagaacc gggcgaggcc ggtgccctgg gccgtaagga ggaggacggg
     1621 caggtgccgg gtggcccggt cgtccttgag caggcggcag aactggtagc cgtccagcag
     1681 gggcatgacg cagtcgctga cgaccacatc cgggaattcg gtggccagga cgatgagggc
     1741 ttccgcgccg ttgcgggcct cgatggtctg gtggccgtgg cgctggaaga ggtgccgcag
     1801 caggctcagc tggatcgggt tgtcgtccac caggaggacc tggagcgccc ggggggttga
     1861 tggtgcggca gaggtcatag attccgttta tcgagtagga gggtgcgccg catgagttcg
     1921 ggcccctgca tgcgcgtgcc ccgtccgtgg gatgctggga cggggaagca tgcctcatga
     1981 tgaccactgg gctcggaaaa tgacaagcaa agccacatcg tcccggaagg gccgctagcc
     2041 gtggaagcgc cgctcctgct cgcgctggcc cgggcctggg cccgggaccg gggcgacctg
     2101 cccgtggagg ccgtatgggc ctccggccgg gctctgggcc tgaagtgggc ggggcggaag
     2161 accgccgaag ggtgggtcct cctgctgcag cccaagcccg agctctggct gctgggggtc
     2221 gaccatcccg cctggaagcg cctggcgggc gaggccccga aggattccgc gaagctctgg
     2281 ggcccctggt tccagggcgc ccgcctccgc gccgtcgagg gtgatccgcg ggagcggtgg
     2341 ctgggcctcg tccttcagcg gcgggccatc accgggcgcc tggaatcgct tcggctggcc
     2401 tttcaggcta tccccggccg gccgggcatc cgggtggacg ggctggacac gcaggtgccg
     2461 cggctgggcc tcggcacgcc ttttcccgcc gccgcacccc agccccaggg cgatccgccg
     2521 cccttcctgc gctggcggga ccgctggggc gaccggctgg aggcggccct ggccggggaa
     2581 gagcccgacg tcctcggcgg cgagggagac ctgctcgccc ggcatcgcgc ctggtccgaa
     2641 ggacgggcgg aggagctgat cctcgccccc gcccgggccg cggtcgagcg gcgccggcag
     2701 gccgagacgg cccgcatgga ccggctcggc caggccctgg cccgggaccg g
//
LOCUS       DATGWW010000508         2614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_447096, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000508 DATGWW010000000
VERSION     DATGWW010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447096"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..359)
                     /locus_tag="VK150_07390"
     CDS             complement(<1..359)
                     /locus_tag="VK150_07390"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLP31168.1"
                     /translation="MPFRNLGELVRHAAERYGDRPAETLVLPNGMEASLSFKQVDHLS
                     DAFAAYLHHGLKLAAGTRVAILLPNALAYPVCAFGALKAGCVVVNTNPLYTPRELELQ
                     LQDSGAEVLVVLDHFGD"
     gene            complement(601..>2614)
                     /locus_tag="VK150_07395"
     CDS             complement(601..>2614)
                     /locus_tag="VK150_07395"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HLP31169.1"
                     /translation="NTERIAGWVFDKHANLRLAVRTTEKGDTEILRVDPEGFTKVYEC
                     TIFESAGPVNFHKDGKRVYLETNKGARDLTELVLFDPATGKEEKLESDPKNRVDFGNA
                     IFSDLTDELLATSYEDDRTRIYWKDKAWEADYKLIQKKLPGQEIALASMTADEQLVMV
                     ATYSDRDPGSRYLFDRRTKKLSLEYVSRENLPLIVFPHGGPWARDRWGFSSFAQFLAN
                     RGYAVLSPNFRGSTGYGKKFLNAGNKQWGDLMQDDITWGVKHLVAKGIADPKRVGIMG
                     GSYGGYATLAGVAFTPDVYAAAVSIVGPSNLLTLLETIPPYWEAGRIIFHERMGDPNT
                     PEGKKQLERQSPLNSVARIKTPLLVVQGANDPRVKKAESEQIVIALRDRGFPVEYICA
                     PDEGHGFARPVNNMAMMAAAEAFFAKHLKGRHQEGGTPDVMKRLPEITVDPKSVVLAK
                     KVDLAAVTVPAPVAQPTAGTYTYGGTIVMGTQSLAISMVRTVKQEGGAWVIIDAAKLP
                     MGEAVDTTTMAEGTLVPLKRQVKQGPVTVEIAFAGTKANGTMAMGGNPKPFSVELGGG
                     AYADGSGSQDALACLPLAQGYTVLFRNLDLQKQKVQLKQAKVVAQEEVKVPAGNFKAW
                     KVEITSAEGEAGLTLMWVDTATRKVVKTVSTLPQMGGAVVTVELQN"
BASE COUNT          396 a          850 c          892 g          476 t
ORIGIN      
        1 ttgtccccga agtggtcaag caccaccagc acctcggcgc cgctgtcctg gagctgcagc
       61 tccagttccc gcggcgtgta gagcgggttg gtgttcacca ccacgcaacc ggccttgagc
      121 gcaccgaagg cgcaaaccgg gtaggccagg gcgttgggca gcaggatcgc gacgcgcgtg
      181 cccgccgcca gtttcaaccc atggtgcagg taggcggcga aggcgtccga gaggtggtcc
      241 acctgcttga agctgaggga ggcttccatg ccgttgggca gcaccagggt ctcagcgggc
      301 cggtcgccgt aacgctccgc cgcgtggcgc acgagctcgc ccaggttccg gaagggcatg
      361 ggctccgcct cgcgccctac ccccgccgga tagcgagacc accaggcctg ttctgcattc
      421 atcgaatccg cctcgaaggt ccagttcccg ccgcggaccg atggttcagc cccgttccag
      481 tgcatggaag gcatcagttt atcccatccg ccccgggatg acccgcgccg aggcgctcca
      541 gacagggaga cggccgggca ggcccggccg tctcctggcg cgtgacccgg aaagcccgga
      601 tcagttctgc agttcgacag tcaccacggc gccgcccatc tgaggcaggg tcgacacggt
      661 cttcaccacc ttgcgggtgg cggtatccac ccacatgagg gtgaggccgg cttcgccctc
      721 ggcggaggtg atctccacct tccaggcctt gaagttgccg gcaggcacct tcacctcttc
      781 ctgggccacg accttggcct gcttgagctg gactttctgc ttctgcaggt cgaggttgcg
      841 gaagaggacc gtgtagccct gggccagcgg caggcaggcg agggcatcct gggagccgga
      901 gccgtcggca taggcgccgc cgcccagctc gacgctgaag ggcttggggt tcccgcccat
      961 ggccatggtg ccgttggcct tggtgccggc aaaggcgatc tccacggtga cggggccctg
     1021 cttcacctgg cgcttcaggg gcaccagggt gccttcggcc atggtggtgg tgtccaccgc
     1081 ctcgcccatg ggcagcttcg cggcgtcgat gatcacccag gcgccaccct cctgcttcac
     1141 ggtgcggacc atggagatgg cgaggctctg ggtgcccatg acgatggtgc ccccataggt
     1201 gtaggtgcct gccgtgggct gggccacggg cgcgggcacg gtcaccgcgg ccagatccac
     1261 cttcttggcg agcaccacgg acttgggatc cacggtgatc tccggcaggc gcttcatgac
     1321 gtcgggcgtg ccgccctcct ggtgccgccc cttcaggtgc ttggcgaaga aggcttcggc
     1381 ggcggccatc atcgccatgt tgttcacggg gcgcgcgaag ccgtgaccct cgtcgggggc
     1441 gcagatgtac tccaccggga agccgcggtc gcgcagggcg atgacgatct gctcactctc
     1501 ggccttcttc acgcgggggt cgttggcgcc ctgcaccacg agaagcggcg tcttgatcct
     1561 ggccacggag ttcaaagggg attgccgttc cagctgcttc ttgccttcgg gggtgttggg
     1621 gtcgcccatg cgctcgtgga agatgatgcg gccggcctcc cagtacgggg gaatggtttc
     1681 gagcagggtg agcaggttgg aggggcccac gatggacacc gccgccgcgt agacatcagg
     1741 cgtgaaggcc acaccggcca acgtggcgta gccgccgtag gaaccgccca tgatgccgac
     1801 ccgcttggga tcggcgatgc ccttcgccac caggtgcttc acaccccagg tgatgtcgtc
     1861 ctgcatgagg tcgccccact gcttgttgcc cgcgttgagg aacttcttcc catagcccgt
     1921 ggagcctcgg aaattcggcg acagcaccgc gtagccgcgg ttggccagga actgcgcgaa
     1981 actgctgaaa ccccagcggt cgcgggccca ggggccgccg tggggaaaga cgatcagggg
     2041 caggttctcg cgggagacgt actcaaggct gagcttcttg gtgcggcggt cgaagaggta
     2101 gcgggaaccg gggtcgcggt cactgtaggt ggccaccatc accagctgct cgtcggcggt
     2161 catggaggcg agagcgatct cctggcccgg cagcttcttc tggatcagct tgtagtcggc
     2221 ctcccacgcc ttgtccttcc agtagatgcg ggtgcggtcg tcttcatagc tcgtggcgag
     2281 cagctcgtcg gtgaggtcag agaagatggc gttcccgaaa tccacccggt tcttggggtc
     2341 ggattccagc ttctcctcct tgcccgtggc ggggtcgaac agcaccagct ccgtcaggtc
     2401 gcgggcgccc ttgttggtct ccaggtagac gcgcttgccg tccttgtgga agttcacggg
     2461 accggcggat tcgaagatcg tgcactcgta gaccttggtg aagccctccg gatccacccg
     2521 gagaatctcc gtgtcgccct tctcggtggt gcgtaccgcg agccgaaggt tggcgtgctt
     2581 gtcgaacacc cagccggcga tgcgctcggt gttc
//
LOCUS       DATGWW010000509         2016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_352080, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000509 DATGWW010000000
VERSION     DATGWW010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352080"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VK150_07400"
     CDS             <1..304
                     /locus_tag="VK150_07400"
                     /inference="COORDINATES: protein motif:HMM:NF013845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31170.1"
                     /translation="RFGQMMEMGFLAEVERLYARGDLNPDLPSIRCVGYRQAWGYLAG
                     EYDEATLVEKAVSATRQLAKRQLTWLRHWEGAARFDSLDPRLMDAALKFLGEASIN"
     gene            420..704
                     /gene="hfq"
                     /locus_tag="VK150_07405"
     CDS             420..704
                     /gene="hfq"
                     /locus_tag="VK150_07405"
                     /inference="COORDINATES: protein motif:HMM:NF001602.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HLP31171.1"
                     /translation="MSKGQALQDPFLNALRKERVPVSIYLVNGIKLQGQVESFDQFVV
                     LLKNSVSQMVYKHAISTIVPARPVRIAPGLGGGEEHAPAAAPADPAAPRF"
     gene            737..>2016
                     /gene="hflX"
                     /locus_tag="VK150_07410"
     CDS             737..>2016
                     /gene="hflX"
                     /locus_tag="VK150_07410"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF008280.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome rescue GTPase HflX"
                     /protein_id="HLP31172.1"
                     /translation="MFERPKSGERAVLVHLDLQQEQEREDLEEFRDLTVSAGAQPVAV
                     VTGARRIPEPKYFIGSGKAEEVKAIVEAEQAEVVLINHPLSPAQERNLEKLLQCRVLD
                     RTGLILDIFAQRARSHEGKLQVELAQLRHLSTRLVRGWTHLERQRGGIGLRGPGETQL
                     ETDRRLLGERIKQLNKRLDKVERQREQSRRARLRNEIPTVSLVGYTNAGKSTLFNRLT
                     DAAVLAANQLFATLDPTMRRVPLPGGDAMVLADTVGFIRHLPHDLVAAFRSTLQETRE
                     ADLLLHVIDASDPEKLAKMDQVNTVLAEIGAHETPQIEVYNKIDCLEGAEPRVECDEE
                     GQVIRVYVSAVTGAGLTALLEAIAGRFRTRVLRHELSLPPSAGRLRAQLYALGAVRSE
                     EVDESGAWRLQVELKPQSLAVLRKSPEFAELLPPA"
BASE COUNT          339 a          683 c          671 g          323 t
ORIGIN      
        1 ccggttcgga cagatgatgg agatggggtt cctggcggag gtggagcggc tctatgcccg
       61 gggggacctg aatcccgacc tcccctccat ccgctgcgtc ggttaccgcc aggcttgggg
      121 ttacctggcc ggcgagtacg acgaggcgac cctggtggag aaggccgtga gcgccacccg
      181 ccagttggcg aagcggcagc tcacctggct gcgccactgg gagggggccg cccggttcga
      241 ctccctggac ccccggctca tggacgcggc attgaaattc ctcggggaag cctccatcaa
      301 ttgaccaggg gccctgtgct acacttgccc tttacggcgc ctccggccgt aattcttggt
      361 taagttttgg atttttgggc gttttttgcc ccgcataaat aaaacatgga gacacctaca
      421 tgagcaaagg gcaggcttta caagacccgt tcctgaacgc cctccggaag gagcgcgtcc
      481 ccgtatccat ctacctggtg aatggaatca agctgcaggg gcaggtggaa tcgttcgatc
      541 aattcgtggt gctgctgaag aattccgtca gccagatggt ctacaagcac gccatctcca
      601 ccatcgtccc ggcgcgtccc gtgcgcatcg ctcccggtct gggtggcggc gaggagcatg
      661 ctccggcggc agccccggcc gatcccgccg cgccccggtt ctgacttcgc ttcgctgagc
      721 ctgttggagg catccattgt ttgaacggcc caagagcggc gagcgtgccg ttctggtgca
      781 cctggatctc cagcaggagc aggagcgcga ggacctcgag gagtttcgtg acctgaccgt
      841 ctcggcgggc gcgcagccgg tggccgtcgt caccggcgcg cgccgcatcc ccgagcccaa
      901 gtacttcatc ggcagcggca aggccgagga ggtgaaggcc atcgtggagg cggagcaggc
      961 cgaggtggtc ctgatcaacc accccctcag cccggcccag gagcgcaatc tcgaaaagct
     1021 gctccagtgc cgcgtgctgg accgcaccgg gctgatcctc gacatctttg cccagcgcgc
     1081 ccgctcgcac gagggcaagt tgcaggtgga actggcccaa ctgcgccacc tctccacgcg
     1141 gctggtccgc ggctggaccc acctggagcg ccagcggggt ggtatcggcc tgcgcggtcc
     1201 cggcgagacc cagctcgaaa ccgaccgccg cctgctgggg gagcgcatca agcagctcaa
     1261 caagcggctc gacaaggtgg agcgccagcg cgaacagagc cgtcgcgccc gcctgcgcaa
     1321 cgagatcccc accgtgtcgc tggtcggcta tacgaacgcc ggcaagtcga ccctgttcaa
     1381 ccgcctgacc gacgccgcgg tgctcgccgc caaccagctc ttcgccaccc tggaccccac
     1441 catgcggcgg gtgcccctgc cgggcggcga cgccatggtg ctggccgaca ccgtcggctt
     1501 catccgccat ctgccccacg acctggtggc cgccttccgt tccaccctgc aggagacccg
     1561 cgaggccgac ctgctgctcc atgtgatcga cgcgagcgac ccggagaagc tggcaaagat
     1621 ggatcaggtg aacacggtat tggcggagat cggcgcccac gagacgccgc agatcgaggt
     1681 ctacaacaag atcgactgcc tggaaggggc cgagccccgg gtggagtgcg acgaggaggg
     1741 gcaggtgatc cgggtctacg tctcggcggt caccggggca gggctcacgg cgctgctgga
     1801 ggccatcgcc gggcggttcc gcacccgagt cctgcgccac gaactctcgc tcccgcccag
     1861 cgccggacgg ctgcgggccc agctctacgc cctcggggcg gtgcgttccg aagaggtgga
     1921 cgagagcggg gcctggcggc ttcaggtgga attgaagccc cagagcctgg cggtgctgcg
     1981 caagtccccg gaattcgcgg agctgctacc cccggc
//
LOCUS       DATGWW010000510         2367 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_115200, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000510 DATGWW010000000
VERSION     DATGWW010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115200"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="VK150_07415"
     CDS             complement(<1..382)
                     /locus_tag="VK150_07415"
                     /inference="COORDINATES: protein motif:HMM:NF014708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HLP31173.1"
                     /translation="MTTRTVSALIPGQPTQDGNRVPLTRLVPGRGQHGSKAFRAMDPF
                     LLMDHFGPMVLPPGTDAGFPPHPHRGFQTLTYLIQGAFRHRDSTGGSGLLRPGGAQLM
                     NAGAGIVHEEMPVPEQLESGGPIEG"
     gene            complement(392..1114)
                     /locus_tag="VK150_07420"
     CDS             complement(392..1114)
                     /locus_tag="VK150_07420"
                     /inference="COORDINATES: protein motif:HMM:NF014708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HLP31174.1"
                     /translation="MTRPATHPTITLRPSAERGHATFGWLDTHHTFSFGDYFDPDHER
                     FRSLRVLNEDRVLPDKGFGTHGHRDMEILTWVLSGALEHRDSLGTHGVIRPGEAQVMS
                     AGTGIRHSEFNASATEPVHFLQIWFLPERQGLAPRYDQVAFADDALRNQWRLIASPDG
                     ADGSVRIFQDVKVRVARLDAGQGLDGAIAPGRAGFLQLARGSLRLDGLALEAGDGARL
                     EGTSTFSVSATSPSEILFFDLA"
     gene            1234..1662
                     /locus_tag="VK150_07425"
     CDS             1234..1662
                     /locus_tag="VK150_07425"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HLP31175.1"
                     /translation="MITRVLVGVDFSEASRQALERAGTWAARLGVPMVAMHVLQPPAP
                     MLPEAQIALPDPAWLHTMEDHARDQLEGWVKAYPGTTVIVRWGGPAEELVSEADPRTL
                     LVVAQVGHSTLERLLFGSTAARVVRLAPCDVLVVRTEKTS"
     gene            complement(1667..>2367)
                     /locus_tag="VK150_07430"
     CDS             complement(1667..>2367)
                     /locus_tag="VK150_07430"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HLP31176.1"
                     /translation="GLRAAKYPSEGIEGVLAQYFGEQRLQEALTEVLVTAYDLEKRDA
                     FFYRRRRAMEDPRYDVPMRVAARATSAAPTYFEPALVAWPGERDVLVDGGVFANNPAM
                     CAYAEARQALSNEGREGDDILLVSLGTGLYSRPFRYEDAKGWGVAGWAKPVLDVIFDG
                     VADTVDYQLRQLLPEAAGGVARYHRFQTDLDADLSEMDDTSAAHLDGLRRAAEGILQR
                     QGAELTALAARLRV"
BASE COUNT          349 a          789 c          865 g          364 t
ORIGIN      
        1 ccccctcgat gggcccgcca gactccagct gctcgggcac cggcatctcc tcgtggacga
       61 tgcccgcgcc ggcgttcatg agctgggcgc cgccggggcg cagcaggccg gagccgccag
      121 tgctgtcccg gtgccggaag gccccctgga tgaggtaggt gagcgtctgg aagccccggt
      181 ggggatgggg cggaaagccc gcgtccgtgc ccggaggcag caccatgggg ccgaagtggt
      241 ccatgagcag gaaggggtcc atggcgcgga aagccttgga gccgtgctgg ccccggcccg
      301 gcacgagccg ggtgagggga acacggttcc cgtcctgcgt gggctggccg ggaatgaggg
      361 cggacacggt gcgggtggtc atgggagctc ctcaggcaag gtcgaagaac agaatttcgg
      421 aaggtgacgt ggcggaaacc gagaacgtgg atgttccttc aaggcgggcg ccgtccccgg
      481 cttccagggc aaggccatcc agcctcaggg agcccctggc cagctggagg aaccccgcac
      541 ggccgggcgc gatggcgcca tcgaggccct gcccggcgtc cagccgggcc acccggacct
      601 tcacatcctg gaagatccgc acggagccgt cggccccgtc gggactggcg atgaggcgcc
      661 actgattccg caaggcgtcg tcggcgaagg ccacctggtc gtagcgcggc gccaggccct
      721 ggcgctcggg caggaaccag atctggagga aatgcaccgg ctcggtggcc gaggcattga
      781 actcgctgtg gcggatgccc gtgcccgcgc tcatgacctg ggcctcgccg ggccggatga
      841 cgccgtgggt gccgaggctg tcgcggtgtt ccagggcccc cgacagcacc caggtgagga
      901 tctccatgtc tcggtggccg tgggtgccga agcccttgtc aggcaggacg cggtcctcgt
      961 tgaggacccg caggctgcgg aaccgctcgt ggtctgggtc gaagtagtcg ccgaaggaga
     1021 aagtgtggtg ggtgtccagc caaccaaagg tggcgtggcc ccgctcggcg gagggacgaa
     1081 gcgtgatcgt gggatgagtc gcaggtcggg tcatggtacc tcccggattc attttaggag
     1141 ttgcaacact tatttcaaga ggtgaacccg aactttttcc atcccaattg atgaccgtgg
     1201 acttatcttt ggggtgtccg aacggaggcc gccgtgatta cgcgggtgct ggtgggtgtg
     1261 gacttctctg aggcctcgcg gcaggccctc gagcgcgcgg gcacctgggc cgcccgtctg
     1321 ggtgtgccga tggtggccat gcacgtgctg cagcccccgg cgcccatgct gccggaagcc
     1381 cagatcgccc tgcccgaccc cgcctggctc cacaccatgg aggatcacgc ccgggaccag
     1441 ctggaggggt gggtcaaggc ctacccaggc accaccgtca tcgtgcgatg gggcgggccg
     1501 gctgaagagc tggtgtcgga ggccgacccc cggaccctcc tggtggtggc ccaggtgggg
     1561 cactccaccc tggagcgcct gctcttcggc agcaccgccg cccgggtcgt gcgcctcgcc
     1621 ccctgcgacg tgctggtcgt gcgcacggag aagacctcct gaaggcctag accctgagcc
     1681 gcgccgcgag ggccgtcagt tccgcgccct gccgttggag gatgccttcg gctgcccggc
     1741 gcaggccgtc caggtgggcc gcactggtgt cgtccatttc gctcaggtcc gcgtccaggt
     1801 cggtctggaa gcggtggtag cgggccacgc cgcccgccgc ctcggggagg agctggcgca
     1861 gctggtagtc caccgtgtcg gccacgccgt cgaagatcac gtccagcacg ggtttggccc
     1921 agccggccac gccccagccc ttcgcgtcct cgtagcggaa gggccggctg tagaggcccg
     1981 tgcccaggga gacgaggagg atgtcatccc cttcccggcc ttcattcgac agcgcctgcc
     2041 gggcctcggc gtaggcgcac atggcggggt tgttggcgaa tacgccgccg tccaccagca
     2101 cgtcgcgctc gcccggccag gccaccaggg ccggctcgaa gtaggtgggt gccgcgctgg
     2161 tggcccgggc cgccacgcgc atgggcacgt cgtagcgcgg atcctccatg gcccttcggc
     2221 ggcggtaaaa gaaggcgtcg cgcttctcca ggtcgtaggc ggtcaccagc acctcggtga
     2281 gggcctcctg gaggcgctgc tccccgaaat actgcgccag cacgccctcg atgccctcgg
     2341 acggatactt ggccgcccgc aggccca
//
LOCUS       DATGWW010000511         2333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_352109, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000511 DATGWW010000000
VERSION     DATGWW010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352109"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..784)
                     /locus_tag="VK150_07435"
     CDS             complement(<1..784)
                     /locus_tag="VK150_07435"
                     /inference="COORDINATES: protein motif:HMM:NF036997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31177.1"
                     /translation="MTLVPTRIQLNRPLPPLTYLAPEGLPAGVRVRVKVRTSLAVGLA
                     MGPDPAPPAAKLRPIEAVLDPFPLLPPKLRELQVFAARYYGCLEAHLLPLSLPQALLP
                     HWEADEDGQRLSFHRERGAWDVLSDLGEAWHRDPAILPTLLHRSGLRSAGFTEVRLTG
                     APHPPRVTPAQAKVLLLLEEAGGALMEPELLESAGVGVSVLGTLEKRGLIARMKRVDL
                     LGQRRAAGPDRTVQLNEEQRTALEAVPLGAFGVHLLQGVTGSG"
     gene            complement(781..2004)
                     /locus_tag="VK150_07440"
     CDS             complement(781..2004)
                     /locus_tag="VK150_07440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31178.1"
                     /translation="MRHPLLLLIPAVLMAQRPALPPAESFDRELKRNRLGTWLVLEDE
                     GAAWGAVVRAALDDEALAELNLPLRVVAGGKSPDALAALLRDRYGWTKGAHWALVDAK
                     GRILAEGAGQPTASSLAGAAEQAGVQSRTRELTAFLRQHPDHLEAQGALLRERVLVAN
                     RRTRKRLGPPKEAAKTEAKPADEKPPEPPKELDAEADLQVWSQVAGQLDNLFTGAFPE
                     TAWDLSRSLNASLAEHSPTVKAVLARHRAAMEEALRRRPNAVEPWMVWLMASKKCGGW
                     PLRPLIQALQPLPGIGPAEWPPMMVQAEFIKDARARRDWVAIRELLEPRWEWMKTGEF
                     GPGFMGNLWTQTLSPLMEALVATGATESADQVLNEALSMGGSANLPGQARDLATRLNR
                     PDLAARWGALTPKGR"
     gene            2039..>2333
                     /locus_tag="VK150_07445"
     CDS             2039..>2333
                     /locus_tag="VK150_07445"
                     /inference="COORDINATES: protein motif:HMM:NF013012.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31179.1"
                     /translation="MLVLGLESSCDDCSAAVVEETAAGPVLRSLTRESQDAIHGPFGG
                     VVPELAAREHLLQVRAVIASALAQAGIKLGDLDRIAVTRGPGLVGSLLATFSAS"
BASE COUNT          308 a          848 c          846 g          331 t
ORIGIN      
        1 ttcccgagcc cgtgaccccc tgcagcaggt ggaccccgaa ggcgccgagg ggcaccgcct
       61 ccagggccgt ccgctgttct tcgttcagct gcacggtgcg gtccggtccg gcggcgcggc
      121 gctggcccag cagatccacc cgcttcatgc gggcgatgag cccgcgcttc tccagggtgc
      181 ccagcacgga cacgcccacg ccggccgatt cgagcagctc gggctccatc agggccccgc
      241 ccgcctcttc caggaggagc agcaccttgg cctgggcggg cgtgacgcgc ggtggatggg
      301 gcgcgcccgt gaggcgaacc tccgtgaagc cggcgctgcg aaggcccgag cggtgcagca
      361 gcgtgggcag gatggcgggg tcccggtgcc aggcctcgcc caggtccgac agcacatccc
      421 aggccccccg ctcccggtgg aaggagagcc gctggccatc ctcgtcggct tcccagtggg
      481 gcagcagggc ctggggcagg ctcagcggca gcaggtgggc ctccaggcag ccgtagtacc
      541 gggcggcgaa gacctgcagc tcccgcagct tcggaggcag cagggggaag ggatccagca
      601 ccgcctcgat gggcctgagt ttcgcggcgg gcggcgcggg gtccggcccc atggccaggc
      661 ccaccgccag gctcgtgcgc accttcacgc gcacgcgcac gccggccggc aggccctccg
      721 gcgccaggta cgtgaggggc ggcagcggac ggttcaactg gatgcgggtc ggtacgaggg
      781 tcatcggccc ttcggtgtga gggcacccca gcgggccgcg aggtcagggc ggttcaggcg
      841 ggtggccaga tcccgggcct ggcccggcag gttggccgag ccgcccatcg acagggcctc
      901 gttgagcacc tggtccgctg actcggtggc gcctgtggcc accagggcct ccatcaacgg
      961 cgacagcgtc tgggtccaga ggttccccat gaaacccggc ccgaactccc cggtcttcat
     1021 ccactcccag cggggctcca ggagttcccg gatggccacc cagtcgcgcc gggcccgcgc
     1081 gtccttgatg aattcggcct gcaccatcat gggcggccat tccgcgggcc cgattcccgg
     1141 caggggttgg agggcctgaa tcaggggacg gaggggccac ccgccgcatt tcttcgaggc
     1201 cattagccac accatccagg gttcgactgc gttgggccgc cgcctcaggg cctcctccat
     1261 ggctgcgcgg tgccgggcca gcacggcctt cacggtgggg gaatgttcgg cgagcgacgc
     1321 attcaggctc cggctcagat cccaggcggt ctctgggaag gcgcccgtga acaggttatc
     1381 cagctgcccg gccacctggg accacacctg caggtcggcc tcggcgtcca gttccttcgg
     1441 gggctccggc ggcttctcat cggccggctt cgcctccgtc ttggccgctt ccttcggcgg
     1501 acccaggcgt ttcctggtcc gccggttggc cacgagcacc cgctcccgca ggagggcgcc
     1561 ctgggcttcc aggtgatccg ggtgctggcg cagaaaggcc gtcaactccc gggtgcggga
     1621 ctggacgccg gcctgctcgg cggctccggc gaggctcgac gcggtgggct gacccgcccc
     1681 ctccgcgagg atccggccct tggcgtcgac gagggcccag tgcgcgccct tggtccaccc
     1741 gtagcggtcc cgcaggaggg ccgccagcgc atcgggggac ttgccgccag ccaccacccg
     1801 gaggggcagg ttcagctcgg ccaaggcctc atcatccagc gcggcacgca ccacggcgcc
     1861 ccaggcggcg ccttcgtcct ccagcaccag ccaggtgccg aggcggttgc gcttcagctc
     1921 gcggtcgaag ctctcggcgg gaggcagggc gggccgctgg gccatcagga cggccggaat
     1981 cagcagcagc agcggatggc gcatgggtgg gctccggttg ccaagttaca ctatcccgat
     2041 gctggtcctg ggcctggaat cctcctgcga cgactgctcc gccgccgtgg tggaggagac
     2101 ggccgcgggc ccggtgctcc gctccctgac gcgggagagc caggacgcca tccatggccc
     2161 cttcggcggc gtggtgcctg aactggcggc gcgggaacac ctgctgcagg tgcgggccgt
     2221 catcgccagc gccctcgccc aggctggcat caagctgggg gacctcgacc gcatcgccgt
     2281 cacccgcggc ccgggcctgg tgggcagcct gctggccacg ttcagcgcca gca
//
LOCUS       DATGWW010000512         2675 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_115236, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000512 DATGWW010000000
VERSION     DATGWW010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2675
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115236"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..635
                     /locus_tag="VK150_07450"
     CDS             <1..635
                     /locus_tag="VK150_07450"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF013308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070567 - cytidylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IspD/TarI family cytidylyltransferase"
                     /protein_id="HLP31180.1"
                     /translation="GLRMGGGLPKQFRDWDGRPLLQVTVEAFLAPDMSRLAGIALAVP
                     ESHLEEVRSWSFPVPCTVVSGGATRQESVWAALRTLPDQPMAPVMIHDAVRPFPPATP
                     LWEALEALKRFDGVLLGEPSTDTLKRVDALGRVLRTEPREEFFRAQTPQIARLGTWLQ
                     AFRAAEEARFSGTDDVALLERLGLAVKLIPSPSSNLKVTTPEDWERARTR"
     gene            765..1673
                     /gene="lpxC"
                     /locus_tag="VK150_07455"
     CDS             765..1673
                     /gene="lpxC"
                     /locus_tag="VK150_07455"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: protein motif:HMM:TIGR00325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HLP31181.1"
                     /translation="MPRATAPQTLSREITISGHGLHGNRPCSVRLVPVPSATGLLFVH
                     TPTGTVIPAKADLAGDLVLSTTLVKDGVRLQTIEHLLSALSGLEVEHLRIEVDAEELP
                     ILDGSAAPWVDAILEAGIQALEGRRRFMKITRPVEVRNGDRWIRVLPFDGLRLRYVID
                     FPIPALGRQSRELSLTPDKYRRELGAARTFCLAQEIDQMRARGLALGGSLDNAVVFGA
                     DGPLNDSLRFEDEAVRHKMLDLVGDLALLGAPLLGLVEAHAAGHAMHVALAQAILADP
                     GCWEWTEEAEPANVQFFFHPLVALPA"
     gene            1912..>2675
                     /locus_tag="VK150_07460"
     CDS             1912..>2675
                     /locus_tag="VK150_07460"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF013013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HLP31182.1"
                     /translation="MSAILADVRADGWAAVRRWTERLDGVALDPLPRRIPALALEAAR
                     DQLDRDRPELMGALREMIARIRRFAEGQRGCLQDLDLPLPGGGSVGERWCPLGAAGVY
                     IPGGRAFYPSTLAMTVIPAQVAGVARIVGVTPPKAQPTLPGAWGVDPLVLACAAELGL
                     EELYPCGGAQALGWLAHGEPAVDLIAGPGNRFVAEAKRQLIGTCGIDALAGPTEVLVI
                     ADAGADPTWLAEDLLAQAEHDPDAAAVLVSADRPLL"
BASE COUNT          365 a         1027 c          894 g          389 t
ORIGIN      
        1 ggggcctgcg catggggggc gggctcccca agcagttccg ggactgggac gggcgccccc
       61 tgctccaggt gaccgtggag gccttcctcg cgcccgacat gtcacgcctc gcgggcatcg
      121 ccctggccgt gcccgaatcg cacctggagg aggtgcggtc ctggagcttc ccggtgccct
      181 gcaccgtggt gtccgggggc gccacccggc aggagtccgt ctgggccgcc ctgcgcaccc
      241 tccccgacca gcccatggcc ccggtgatga tccacgatgc cgtgcgcccc tttcctccgg
      301 ccacgcccct ctgggaggcc ctggaggccc tcaagcgctt cgatggggtg ctgctgggcg
      361 agccctccac ggacaccctg aagcgcgtgg atgccctggg acgggtgctg cgcaccgagc
      421 cccgggagga gttcttccgg gcccagaccc cccagatcgc ccggctgggc acctggctcc
      481 aggccttccg cgccgccgag gaggcccggt tctcgggcac ggacgacgtg gcgctcctcg
      541 aacgcctcgg cttggccgtg aagctgatcc caagcccgag ctccaacctg aaggtcacca
      601 cgccggagga ctgggagcgg gcccgcaccc gctgaacccg gggccgacca cagggtgtgg
      661 tggccgtggc cacacaccca caggtaatga aatagtataa acattattat aattaatttt
      721 aacaaatggc atggtattgg cattacctct gacgaggtcg aatcatgccc cgcgccaccg
      781 ccccccagac cctgagccgc gagatcacca tctcgggcca cggtctgcat gggaaccggc
      841 cctgctcggt gcgcctggtg cccgtcccct cggccacggg gctcctgttc gtccacaccc
      901 ccaccggcac cgtgatcccc gccaaggccg acctggccgg cgacctggtc ctgtccacca
      961 ccctggtgaa ggacggcgtc cggctccaga ccatcgagca cctgctgtcc gccctgtccg
     1021 gcctggaggt cgagcacctc cgcatcgagg tggacgccga ggagctcccc atcctcgacg
     1081 gcagcgccgc cccctgggtg gacgccattc tcgaagccgg catccaggcg ctcgaaggcc
     1141 gccgccgctt catgaagatc acccgccccg tggaagtccg gaacggcgac cgctggatcc
     1201 gcgtcctccc cttcgacggc ctgcgcctcc gctacgtcat cgacttcccc atccccgccc
     1261 tgggccgcca gagccgcgaa ctcagcctca cgccggacaa gtaccgccgc gaactgggcg
     1321 ccgcccgcac cttctgcctg gcccaggaga tcgaccagat gcgcgcccgg ggcctggccc
     1381 tcggcggcag cctcgacaac gccgtggtct tcggcgccga tgggcccctc aacgactcgc
     1441 tgcgcttcga ggacgaggcc gtgcgccaca agatgctcga cctggtgggc gacctcgccc
     1501 tgctgggcgc gcccctgctg ggcctcgtgg aagcccacgc cgccggccac gccatgcacg
     1561 tcgccctcgc gcaggcgatc ctcgcggatc ccggctgctg ggaatggacc gaggaagccg
     1621 agcccgccaa cgtgcagttc ttcttccatc cgctcgtggc gctgcccgcc tgacgcctgc
     1681 aggcgtttcg gcgaccggtg gcttgagggt cgtcagcctt tttgattgcg gcaggccggt
     1741 ggatgctggc aggctggtcc cttcacctta ggggtgcaca ggtgttactt catctcgatc
     1801 actgacctga ccaaccgggc cgaccagccc gggcaggcgc ccgaccaggc gcggaacctg
     1861 gtggccgagt gggttcgagg gggagcggcg gaggaagaca cgcgcaggac ggtgtcggcc
     1921 atcctggcgg acgtgcgcgc cgatggctgg gccgcggtgc gccgctggac cgaacggctg
     1981 gacggcgtgg cgctggaccc cttgcccagg cgcatccccg ccttggccct ggaagccgcc
     2041 cgggaccagc tcgaccgcga ccggcccgag ctcatgggcg ccctgcggga aatgatcgcg
     2101 cgcatccgcc gcttcgcgga gggccagcgg ggttgcctcc aggacctgga cctgcccctg
     2161 cccggcggcg gctccgtggg cgagcggtgg tgccccctgg gcgcggcggg cgtctacatc
     2221 cccggcggcc gcgccttcta tccctccacc ctggccatga cggtcatccc cgcgcaggtg
     2281 gcaggcgtgg cgcgcatcgt gggcgtgacg cccccgaagg cccagcccac cctgcccggc
     2341 gcctggggcg tggatccgct ggtgctggcc tgcgccgcgg agcttggact ggaggaactc
     2401 tatccctgcg gcggcgccca ggccctcggc tggctggccc acggcgagcc ggcggtggac
     2461 ctcatcgccg gcccgggcaa ccgcttcgtg gccgaggcca agcgccagct catcggcacc
     2521 tgcggcatcg acgccctcgc cggccccacc gaagtgctgg tgatcgccga tgcaggcgcc
     2581 gaccccacct ggctcgccga ggacctcctg gcccaggcgg aacacgaccc cgacgccgcc
     2641 gccgtgctgg tgagcgccga ccgccccctg ctcga
//
LOCUS       DATGWW010000513         1952 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_262649, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000513 DATGWW010000000
VERSION     DATGWW010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_262649"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..720)
                     /locus_tag="VK150_07465"
     CDS             complement(<1..720)
                     /locus_tag="VK150_07465"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HLP31183.1"
                     /translation="MKIIVTDEVTGEGLALLQGDPRITLDVRLGLSKADLLACIGGYD
                     AIITRSGTTVDKALLDAATNLKIVARAGVGIDNVDVDHASSRGVIVVNAPFGNTNSAA
                     EHTLALLLSACRHIPAANASLKAGEWKRAKFTGVELKGKTAGVIGLGKVGGRVATRLK
                     AFECEVLGCDPYIGAKRAQDLGVRMVDLAELCRACDIITVHTPLNEETQGMIGPDQVA
                     LMKEGVILLNVARGGILDEPAL"
     gene            complement(820..1266)
                     /locus_tag="VK150_07470"
     CDS             complement(820..1266)
                     /locus_tag="VK150_07470"
                     /inference="COORDINATES: protein motif:HMM:NF028509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HLP31184.1"
                     /translation="MVRRLLILPALCLSLAAQEVTPAETEALVKEAIAFAKTNGKDAA
                     FKEITKVGGRFHRHGGELYVFVYDMDGKVVAHGQGASKVGVNQFKAKDPDGVEFVQDR
                     IKLAKTKGKGWHDYKYLNPKDGKKEPKTSYIEVWDNLIFGAGIYKK"
     gene            complement(1330..>1952)
                     /locus_tag="VK150_07475"
     CDS             complement(1330..>1952)
                     /locus_tag="VK150_07475"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HLP31185.1"
                     /translation="VFHLLKQYSLLVGSLYLALTLLFILVFVPVAWLAGIRILAFVKA
                     IKDPALTAFSTASSEAALPKLLEEVVRFGVPRQVASFVIPTGYSFNLDGSTLYLVLAS
                     LTIAQAAGIHMSLGQQLLMVFTFMLTSKGVAGVPRATLVIIAATCGSFGLPGEAGIAM
                     LLAVDEIMDMARTTVNVIGNGLASVVIAKWERVFGTDPELLPDQEG"
BASE COUNT          306 a          634 c          665 g          347 t
ORIGIN      
        1 cagggcgggc tcgtccagga tgccgccccg ggccacgttg aggaggatga ccccctcctt
       61 catgagggcc acctggtcgg gcccgatcat gccctgggtc tcctcgttca gcggcgtgtg
      121 cacggtgatg atgtcgcagg cgcggcagag ttcggccagg tccaccatgc ggacgcccag
      181 gtcctgggcc cgcttggcgc cgatgtaggg atcgcagccc agcacctcgc actcgaaggc
      241 cttgagccgc gtggccaccc ggccccccac cttgcccagg ccgatgacgc cggcggtctt
      301 gcccttcagc tcgacacccg tgaacttcgc ccgcttccac tcgcccgcct tcaggctggc
      361 gttggcggcg gggatgtggc ggcaggcgga gagcagcaag gcgagggtgt gctccgcggc
      421 gctgttggtg ttgccgaagg gggcgttcac cacgatcacg cccctggaac tggcgtggtc
      481 cacgtccacg ttgtcgatgc ccacgcccgc ccgggccacg attttcaggt tcgtggccgc
      541 gtcgagcagc gccttgtcca ccgtggtgcc gctgcgggtg atgatggcgt cgtagccgcc
      601 aatgcaggcc agcaggtcgg ccttcgagag acccagacgc acgtcgaggg tgatgcgggg
      661 gtccccctga agcagggcta gaccctcgcc ggtcacctcg tcggtcacga tgatcttcat
      721 ggcgtccccc gtcgggagtg tgtcctggtc ggcgtgaagg gaatttccca gcttagcgat
      781 gggaactcag cccgacaagg acgatacggg ggcgacgggc tacttcttgt agatgcccgc
      841 gccgaagatc aggttgtccc agacctcgat gtagctggtc ttgggctcct tcttgccatc
      901 cttggggttc aggtacttgt agtcgtgcca ccccttgccc ttggtcttgg ccagcttgat
      961 gcgatcctgc acgaactcca cgccgtcggg atccttcgcc ttgaactggt tcacacccac
     1021 cttggacgcg ccctggccgt gggcgacgac tttgccgtcc atgtcgtaga cgaagacata
     1081 gagctcgccg ccgtggcgat ggaagcggcc gccgaccttg gtgatctcct tgaaggcggc
     1141 gtccttcccg tttgtcttcg cgaaggcgat ggcctccttc acgagcgcct ccgtctcggc
     1201 gggcgtgacc tcctgggcgg ccagggagag gcaaagcgcg gggaggatga gaagtcgacg
     1261 gaccatgggg tctccttgga cagatacgac tcgtttcggc caccagtatc ggttcttgac
     1321 gactggaaac tacccctcct ggtccggtaa gagctcgggg tcggtcccga agacccgctc
     1381 ccacttggcg atcaccacgc tggcgaggcc gttcccgatg acgttcaccg tggtgcgggc
     1441 catgtccatg atctcgtcca ccgccaggag catggcgatc ccggcctccc cgggcagccc
     1501 gaagctgccg caggtggcgg cgatgatcac cagggtggcc cggggcacgc cggccacgcc
     1561 cttgctggtg agcatgaagg tgaagaccat cagcagctgc tggcccaggc tcatgtggat
     1621 gcccgccgcc tgggcgatgg tgaggctggc cagcaccagg tagagggtgg agccgtccag
     1681 gttgaagctg taccccgtgg ggatgacgaa gctggccacc tggcgcggca cgccgaaccg
     1741 gaccacctct tccagcagct tgggcagggc cgcctcgctg ctggccgtgc tgaacgccgt
     1801 gagggccgga tccttgatgg ccttcacgaa ggccaggatg cggatgcccg ccagccaggc
     1861 cacggggacg aagaccagga tgaagagcag ggtgagggcc aggtagaggc tgcccaccag
     1921 gaggctgtac tgcttgagca ggtggaacac cg
//
LOCUS       DATGWW010000514         1557 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_85366, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000514 DATGWW010000000
VERSION     DATGWW010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85366"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1098
                     /locus_tag="VK150_07480"
     CDS             <1..1098
                     /locus_tag="VK150_07480"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP31186.1"
                     /translation="HLRTGAFTLVFLDLNLPDSRGLETLADIQAEAKDANVLVMTTVV
                     DEELGIQAMRLGAHDYFMKGRIPPDAIQRMARYACERRSAARALQRSRDELEVHVRHT
                     QKMEAIGQLAAGIAHEINTPIQFIGDNCKFLGDGFQELIAFFDGLEPGRLPPPEELGA
                     RLAALDLSYLREEIPKAIHQSLDGVSRVSRIVSAMKDFSHPGVDSRQAVDLNKAIEST
                     ITVSRNTWKYVADLDTQFDPGLPLVPCFPGEFNQVVLNLLVNAAHAIEEALAARGGTG
                     RGLIRVRTWQAEREVMVEIADNGIGIPSHIQSRIFDPFFTTKEVGKGTGQGLSIARAV
                     IVDKHKGRIQVRSTPGEGSAFTLCLPKAPQA"
     gene            complement(1111..>1557)
                     /locus_tag="VK150_07485"
     CDS             complement(1111..>1557)
                     /locus_tag="VK150_07485"
                     /inference="COORDINATES: protein motif:HMM:TIGR02241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HLP31187.1"
                     /translation="PGAAMAAHSPHLACHFLVEAGFARIGFTRVQLPRMERDVIRYRE
                     GSDPVETARLLPGPLRLGECLLERGVIPPDQDFFRWISAGSFGQAERRDLVVKLLNAD
                     HEPTLTWRLRDAFPVALDWSPLEAQGGGVLIESLRLAVGAMTVEAP"
BASE COUNT          280 a          521 c          523 g          233 t
ORIGIN      
        1 cacctccgga ccggggcctt caccctggtg ttccttgact tgaacctgcc ggacagccga
       61 ggcctcgaga cgttggccga catccaggcc gaggcgaagg acgcgaacgt gctggtcatg
      121 accacggtgg tcgacgagga gttgggcatc caggccatgc gtctgggcgc gcacgactac
      181 ttcatgaagg gaagaatccc ccccgacgcc atccagcgca tggcgcggta tgcctgtgag
      241 cgccggtccg ccgccagggc cctccagcga tccagggatg aactggaggt ccacgtccgg
      301 catacccaga aaatggaggc gatcgggcag ctggctgcag gcatcgcgca cgagatcaac
      361 acgccgatcc agttcatcgg ggacaactgc aagttcctgg gcgacggatt ccaggagctg
      421 atcgccttct tcgacggcct cgagcccggt cgcctccctc cgcccgagga actgggcgcg
      481 cgcctggccg cactggacct cagctacctg agagaggaga ttcccaaggc catccaccaa
      541 tccctggatg gcgtgtcgag ggtgtcccgg atcgtgtcgg ccatgaagga tttctcccac
      601 cccggagtcg atagccgcca ggcggtggac ctcaacaagg ccatcgagag caccatcacc
      661 gtctcgcgga acacctggaa gtacgtggcg gacctggaca cgcagttcga tcccgggctt
      721 cccctggtgc cctgtttccc tggggaattc aaccaggtgg tgctgaacct cctcgtgaat
      781 gcggcccacg ccatcgagga ggcccttgcg gcgcgcgggg gaaccggccg agggctcatc
      841 cgcgtgcgca cctggcaggc cgagcgcgag gtgatggtcg aaatcgcgga taacgggatc
      901 ggcattccat cgcacatcca gtcgcgcatc ttcgatccgt tcttcacgac gaaggaggtg
      961 ggcaagggca ctggccaggg gctgtccatc gcccgcgcag tcatcgtcga caagcacaag
     1021 gggcgcatcc aggtcaggtc cacgccgggc gagggaagtg ccttcaccct ctgccttcca
     1081 aaggcccccc aggcctgacc aggctcgccg ttaaggggcc tcgaccgtca tggcgcccac
     1141 ggcgagccgc aggctttcga tgagcacgcc gccgccctgg gcctcgagcg gcgaccagtc
     1201 gagcgccacg gggaaggcat cccgcagccg ccaggtcagg gtgggttcat ggtccgcgtt
     1261 cagcagcttg acgacgaggt cccgccgctc ggcctggccg aagcttccgg cgctgatcca
     1321 acggaagaag tcctggtcgg gcgggatcac gccgcgctcc aggaggcact cccccagccg
     1381 cagggggcct ggcagcagac gcgcggtctc gacaggatcc gaaccctcgc ggtagcggat
     1441 cacatcgcgc tccatgcggg gcagctgcac acgggtgaag ccgatgcggg cgaatcccgc
     1501 ttcgaccagg aagtggcagg cgaggtgggg cgagtgggcg gccatggcgg ctccagg
//
LOCUS       DATGWW010000515         1730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_37822, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000515 DATGWW010000000
VERSION     DATGWW010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37822"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1087
                     /gene="glgB"
                     /locus_tag="VK150_07490"
     CDS             <1..1087
                     /gene="glgB"
                     /locus_tag="VK150_07490"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HLP31188.1"
                     /translation="WGTLIYNYGRTEVQNVLIANALFWLDQYHVDGLRVDAVASMLYL
                     DYSREPGGWIPNRHGGRENLEAVAFLRRLNEVVYAQFPDAFTVAEDSTAWPGVSRPTN
                     LGGLGFGFKWDMGWMHDTLRYLGQGMMARPHHHDDITFSMLYHDSENYVLPLSHDEVV
                     HGKRSLLDRMPGDAWERLANLRLLYAWLFAHGGKKLLFMGGEFAQGREWNHDTALDWE
                     LLDEPAHKGIHDLLRDLNGLYRGSPSLHEGDCQPGGFAWIDCGDRFNSVLTLLRRASD
                     PADFTVIAFNFTALTRRGYRIGVPTSGVYREALNTDSAHYGGRNLGNTGVARTEPVPA
                     HGFAQSLNLTLPPLAALFLRPEPASHP"
     gene            1097..>1730
                     /locus_tag="VK150_07495"
     CDS             1097..>1730
                     /locus_tag="VK150_07495"
                     /inference="COORDINATES: protein motif:HMM:NF023325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3417 domain-containing protein"
                     /protein_id="HLP31189.1"
                     /translation="MDKLILKMQKLTQNLWWTWKPEVRTIFRDLDLDLYHKAHQNPMS
                     VLKQISAEQLEKRAADVDVPARVDRALRQLQEYLTPMTTWGLTHAGAMRSRPIAYFCM
                     EFGVHESLPIYSGGLGILAGDHLKAASDLGIPLVGVGLLYHEGYTNQVLDKTLWQQDV
                     IEPFDIADLPVTHTVDRHGEPVHVMVELPGRKVHAAVLEVPVGRIRLLLLD"
BASE COUNT          294 a          646 c          517 g          273 t
ORIGIN      
        1 ctggggcacc ctgatctaca actacgggcg caccgaagtc cagaacgtcc tcatcgccaa
       61 cgccctcttc tggctcgacc agtaccacgt ggacggcctg cgggtggatg cggtggcgtc
      121 catgctctac ctcgactaca gccgcgaacc cggcggctgg attcccaacc gccacggagg
      181 acgggagaac ctcgaggccg tggccttcct gcggcggctc aacgaggtgg tctacgcgca
      241 gttccccgac gccttcaccg tggccgagga ttccaccgcc tggcccggcg tgtcgcgccc
      301 caccaatctc ggcgggctcg gcttcggctt caagtgggac atgggctgga tgcacgacac
      361 cctgcggtac ctgggccagg gcatgatggc gcggccccat caccacgacg acatcacctt
      421 ctcgatgctc taccacgaca gtgaaaacta cgtgctgccc ctctcccacg acgaggtggt
      481 gcatggcaag cgcagcctcc tcgaccgcat gccgggcgac gcctgggagc gcctggccaa
      541 cctgcggctg ctctacgcct ggctcttcgc ccatggcggc aagaagctgc tcttcatggg
      601 cggcgagttc gcgcaagggc gggaatggaa ccacgacacg gccctggact gggagctgct
      661 cgacgagccc gcccacaagg gcatccatga cctgctgcgg gatctcaacg ggttgtaccg
      721 cggcagcccc tccctccacg aaggcgactg ccagcccggc ggattcgcct ggatcgactg
      781 cggcgaccgc ttcaacagcg tgctcacgct cctgcgccgg gcctcggatc ccgccgactt
      841 caccgtcatc gccttcaact tcaccgccct gacccgccgc ggctaccgca tcggcgtgcc
      901 cacgtcgggc gtctaccggg aggcgctgaa caccgactcc gcccattacg gggggcgcaa
      961 tctaggaaac accggcgtgg cccgcaccga gcccgtgccg gcccacggct tcgcccagtc
     1021 cctgaacctc accctgccgc ccctcgcggc cctcttcctg cggcccgaac ccgcttccca
     1081 cccataggaa ggtcccatgg acaagctcat cctcaagatg cagaagctca cccagaacct
     1141 ctggtggacc tggaagcccg aggtgcgcac catcttccgg gacctggatc tggacctgta
     1201 ccacaaggcc caccagaacc ccatgtccgt gctcaagcag atttccgcgg aacagctgga
     1261 aaagcgggcc gcagacgtgg acgtgcccgc ccgggtggac cgggcgctgc gacagctcca
     1321 ggaatacctc acccccatga ccacctgggg cctcacgcat gccggcgcca tgcggtcccg
     1381 ccccatcgcc tacttctgca tggagttcgg cgtccatgaa tccctgccca tctattccgg
     1441 gggcctcggg atcctggcgg gcgaccacct caaggccgcc tcggacctgg gcatcccgct
     1501 ggtgggcgtg gggctgctct accacgaggg ctacaccaac caggtgctgg acaagaccct
     1561 ctggcagcag gacgtgatcg aacccttcga catcgcggat cttcccgtca cccacacagt
     1621 ggatcggcac ggcgagcccg tgcatgtgat ggtggagctg cccggccgca aggttcacgc
     1681 ggcggtgctg gaagtccccg tcggccgcat ccgcctgctg ctgctcgata
//
LOCUS       DATGWW010000516         3470 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_263099, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000516 DATGWW010000000
VERSION     DATGWW010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3470
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263099"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1767)
                     /locus_tag="VK150_07500"
     CDS             complement(<1..1767)
                     /locus_tag="VK150_07500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31190.1"
                     /translation="MSDFPQLAQSLAVALKALQMYTASHPRTQEALVAGHAVLDRWLL
                     EAERLQFVVSGPKAFVDGQVQDARNPHVALLVKLIAERGVSGFVFERGVAVEELLAFL
                     QGFATKPARLEEMGGFEALLTASGVRHIRVSQTRYQEVLEGEESGSDDKAPAFAPAPP
                     APPASPSPDNLVKFIRDALQAALARGAGATSGPHAAYSSGSHPAFGAAPGSAPSPAPG
                     TDDGLGFLRGFHPADLSHLGPLGQELGLGEGMPTPSQLGTLRQVLMGLAPEVQLNLLA
                     GLSTLPEKPAGLALGVKALAGEILAVATSTALAQGASWVQLRGPLQDILRPLAERQAM
                     GRALSAHLRSSGQDAAQAEAILRHLEWEALSLEAKLLKVLEEGHLFELSLEHRLAFLR
                     ELLDLRRHDDFLHIMEALLDILRSERSDLRMKAAQTLTGVARWAHDPGLPPGGEGALT
                     EGLRAHFAWEPDPPIHRWTVESLEAALAALVLRGDFEAVLSDIHELEGLCAFLEEQHP
                     WRNDALARLRAALLRPQLMDAVVQRAFSLERDQMILQVHPYLEFLGDPMTRHLVARLG
                     EETDRTRRGRLVEAVRSMGPSAL"
     gene            complement(1764..2444)
                     /locus_tag="VK150_07505"
     CDS             complement(1764..2444)
                     /locus_tag="VK150_07505"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HLP31191.1"
                     /translation="MTQPTPWRTACEQALRRFSDADAIRFWGIGHEVDGTYQPIFNYR
                     FEHTYAAVLLARWLAPATGADLDVVECAAWLHDLAKRLKDPHAKDTHAQDASAKVEGL
                     LAGTDFPSAKIPAVRHAIEHHVGLKLTRRLEPLETACLWDCDKLSKIGAASLIHFGCI
                     SGAFQPITTAEILRRGSAWLDLARDITASFNTEPAREEGRRRLRFIEAHYDQLRREWS
                     DPMEITPP"
     gene            complement(2441..>3470)
                     /locus_tag="VK150_07510"
     CDS             complement(2441..>3470)
                     /locus_tag="VK150_07510"
                     /inference="COORDINATES: protein motif:HMM:NF012447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aromatic amino acid lyase"
                     /protein_id="HLP31192.1"
                     /translation="VGEGLAWSSDRQIPGGEALAAAGLRPVTLQAKEGLALINGTQLI
                     TSLGNLAVEKFTRLAALADEIAALSLEALRGTRAAFDPRIHAARPHPGQIRVAEHMRQ
                     LLGESSAIAESHRDCHRVQDAYSLRCIPQVHGVTLDALQFAGAILERELNSATDNPMI
                     FTDTQESRSGGNFHGQYPAFACDVLAIAAADLASISERRQERLVNPAYSDLPAFLTQN
                     GGLESGFMMAHVTSAALVSEMKGLAHPACVDTIPTSAGKEDHVSMGPIAARKLLRAVD
                     ALEQVLAIEARMALEGVRILGLAPAVGVQPLMDRLAKDCAPWADRVMFEEIHRTLDAL
                     HAHEEARP"
BASE COUNT          472 a         1132 c         1358 g          508 t
ORIGIN      
        1 gagggcggag gggcccatgc tgcgcacggc ctccaccagt cggccgcggc gggtgcggtc
       61 ggtttcctcg cccagccgcg ccaccaggtg ccgggtcatg ggatcgccca ggaactcgag
      121 gtaggggtgc acctgcagga tcatctggtc ccgctccagg ctgaacgccc gctggaccac
      181 cgcgtccatg agctgggggc gcagcagggc ggcgcgcagg cgggcgaggg catcgttgcg
      241 ccagggatgc tgttcctcca ggaaggcgca gagcccttcg agctcgtgga tgtccgacag
      301 gaccgcctcg aagtccccgc gcagcaccag cgccgccagc gctgcctcca ggctctccac
      361 ggtccagcga tggatgggtg ggtcgggctc ccaggcgaaa tgggctcgca acccttcggt
      421 caaggcgccc tcgccgccgg gcggcaaccc ggggtcgtgg gcccaccgcg ccacgccggt
      481 gagggtctgg gcggccttca tccggaggtc gctccgttcg ctgcgcagga tgtcgaggag
      541 cgcctccatg atgtggagga aatcgtcgtg gcggcgtagg tccagcagct cgcgcaggaa
      601 ggccaggcga tgctcgaggc tcagctcgaa gaggtggccc tcctccagga ccttgaggag
      661 cttggcctcc aggctgaggg cttcccactc caggtggcgg aggatggcct cggcctgggc
      721 agcgtcctgc cccgagctgc ggagatgggc tgacagggcg cgccccatgg cctggcgctc
      781 ggcgaggggg cgaaggatgt cctggagggg gccccgcagc tgcacccagg aggccccttg
      841 ggccagggcc gtgctggtgg ccacggccag gatctctccg gccagggcct tcacgccgag
      901 ggccaggccc gccggcttct ccggcagggt cgacaatccg gcgaggaggt tcagctgcac
      961 ctcgggcgcc aggcccatga gcacctgccg cagggtgccg agctgggaag gggtgggcat
     1021 gccttcgccc aggcccagct cctggcccag gggccccagg tggctgaggt cggcggggtg
     1081 gaagccgcgc aggaagccca ggccatcgtc cgtccctggt gcgggagagg gcgcggagcc
     1141 gggcgccgcg ccgaaggcgg ggtgggagcc ggagctgtag gcggcgtggg gaccggaagt
     1201 cgctcccgcg ccccgggcga gggcggcctg cagggcgtcc cggatgaact tcacgaggtt
     1261 gtccggggag gggctcgccg gtggggcggg tggggcgggc gcgaaggccg gcgccttgtc
     1321 gtcggacccg gattcctcgc cttcgagcac ctcctgataa cgggtctggg acacgcggat
     1381 gtggcgcacc ccggaggcgg tcagcagggc ctcgaagccc cccatctcct ccagccgggc
     1441 cggcttggtg gcaaatccct gcaggaaggc gagcagctcc tcgacggcca ccccccgctc
     1501 gaagacgaag ccgctgacgc cccgttcggc gatcaacttc accagcagtg cgacgtgggg
     1561 attccgcgcg tcctggacct gcccgtccac gaaggccttc gggccggaca ccacgaactg
     1621 cagccgttcc gcctccagca gccagcggtc gagcacggca tgccccgcga cgagggcctc
     1681 ctgggtgcgg gggtgggacg ccgtgtacat ctgcagcgcc ttgagggcga cggcgaggct
     1741 ctgggcaagc tgcgggaagt cgctcacggc ggggtgatct ccatcggatc cgaccattcc
     1801 cggcggagct ggtcgtagtg ggcctcgatg aacctcagcc gccggcgacc ctcctcccgg
     1861 gccggctccg tgttgaagga ggcggtgatg tcccgggcca ggtccagcca ggcgctgccg
     1921 cggcgcagga tctcggcggt ggtgatgggc tggaaggcgc cgctgatgca gccgaagtgg
     1981 atgaggctgg cggcgccgat cttgctgagc ttgtcgcagt cccagaggca ggcggtctcc
     2041 agcggctcga gacgccgggt gagtttgagg ccgacgtggt gctcgatggc gtggcgcacg
     2101 gcggggatct tcgcggacgg gaagtcggtg cccgcgagca gcccctcgac cttggcggag
     2161 gcatcctggg cgtgggtgtc cttggcgtgg gggtccttca ggcgcttggc gaggtcgtgc
     2221 agccaggcgg cgcactcgac cacgtcgagg tcggcaccgg tggccggagc cagccaccgg
     2281 gcgagcagca ccgccgcgta ggtgtgctcg aagcggtagt tgaagatggg ctggtaggtg
     2341 ccgtccacct catggccgat gccccagaac cggatcgcgt cggcgtccga gaagcgccgc
     2401 agcgcttgtt cacaggcggt ccgccagggg gtgggctggg tcatggacgg gcttcctcgt
     2461 gggcgtgaag ggcatcgagg gttcgatgta tttcttcaaa catgacgcgg tcggcccagg
     2521 gggcgcaatc cttggcgagg cggtccatca ggggctgcac gcccaccgcc ggggccagcc
     2581 cgaggatgcg tacgccttcg agggccatgc gggcctcgat ggcgaggacc tgctccaggg
     2641 cgtccacggc ccgcagcagc ttgcgcgcgg cgatggggcc catgctcacg tgatcctcct
     2701 tgccggcgct ggtggggatc gtgtccacgc aggccgggtg ggccaggccc ttcatctcgc
     2761 tcaccagggc tgcggaggtg acgtgggcca tcatgaagcc cgattccagg ccgccgttct
     2821 gggtaaggaa ggcgggcagg tccgagtagg ccgggttcac caggcgctcc tggcgccgct
     2881 cggagatgct ggccaggtcg gcggcggcga tggcgagcac gtcgcaggcg aaggccgggt
     2941 actggccgtg gaagttgccg ccggagcggg actcctgggt gtcggtgaag atcatcgggt
     3001 tgtcggtggc gctgttcagc tcccgctcca ggatggcgcc ggcgaactgg agggcgtcca
     3061 gggtcacgcc gtgcacttgg gggatgcagc ggaggctgta ggcgtcctgc acgcggtggc
     3121 agtcccggtg gctctcggcg atggcgctgg attcgcccag cagctgccgc atgtgctcgg
     3181 ccacgcggat ctggccaggg tggggccggg ccgcgtggat gcgggggtcg aaggcggcgc
     3241 gggtgccgcg cagcgcctcc aggctcaggg cggcgatctc gtccgccagg gccgccaggc
     3301 gggtgaactt ctccaccgcc aggttgccca gcgacgtgat gagctgggtg ccgttgatga
     3361 gcgccaggcc ctccttggcc tggagggtca cgggccggag gccggccgcg gccagcgcct
     3421 cgccgcccgg gatctggcga tcgctggacc aggccagccc ctctcccacg
//
LOCUS       DATGWW010000517         1749 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_352760, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000517 DATGWW010000000
VERSION     DATGWW010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352760"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..931)
                     /locus_tag="VK150_07515"
     CDS             complement(<1..931)
                     /locus_tag="VK150_07515"
                     /inference="COORDINATES: protein motif:HMM:NF024884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4118 domain-containing protein"
                     /protein_id="HLP31193.1"
                     /translation="MEASPRPILVALGSEARALRLIQAGFRMARELSAPWIAVHVETG
                     GSQLTEDTEQVQVWLQEAQRLGAEIRIVQAPTLAQGLTEVTRQTRAQALLLGRSLDRW
                     PWARVGHSTADELQRRGLDTRIEVLDDRRDASLAKLRGSGFSAMVGTFSVLAACSGLA
                     WLVPREGNIALVLPVYLAAVAFIAHRWGQGPATLASVLSALLYSFLLETPRFSSSATH
                     WPNLLFFLAMLLAAQTVVGLLRRLRQQAREVQRKEVHTASLYLLGRALSRSLTPGQVA
                     DTAAEHIRRVFKAEACLLFPEGSQWRALPPPSLD"
     gene            1098..>1749
                     /locus_tag="VK150_07520"
     CDS             1098..>1749
                     /locus_tag="VK150_07520"
                     /inference="COORDINATES: protein motif:HMM:NF013104.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31194.1"
                     /translation="MLLCASLVMLMTPGLAFFYGGLVGRKNVLTIMTQSFVSLGWTTV
                     LWFAFGYSMCFGPTWHGIVGDPSHYAFLKGITLNTMYTGNDAGIPLIVHVAYQMMFAI
                     ITPALITGAFANRVTFKAYFLFLTGWLIFVYFPFVHMVWSPEGLLAKWGVLDFAGGVV
                     VHNTAGFAALASILYVGRRKVIENVPHNIPLIALGTGLLWFGWYGFNAGSELRVDSV"
BASE COUNT          274 a          583 c          610 g          282 t
ORIGIN      
        1 ggtccagcga aggcgggggc agggcccgcc actgggagcc ctctggaaac agcaggcagg
       61 cctcggcctt gaacacgcgc cggatgtgct cggcggcggt gtcggccacc tggccggggg
      121 taaggctccg cgacagggct cggcccagca ggtagagcga ggcggtgtgc acttccttgc
      181 gctgcacttc ccgggcctgc tggcgcaggc gccggagcag gcccaccacc gtctgcgcgg
      241 caagcaacat ggccaggaag aagaggaggt tgggccagtg ggtggccgag ctgctgaagc
      301 ggggcgtctc gagcaggaag ctgtagagca gggcgctcag caccgaggcc agggtggcgg
      361 gcccctggcc ccagcggtgg gcgatgaagg ccacggccgc caggtacacc ggcagcacga
      421 gggcgatgtt gccttcgcgg ggcacgagcc aggccaggcc ggagcaggcc gccagcacgc
      481 tgaaggtgcc caccatggcg ctgaagccgc tgccccggag tttggccagg gacgcgtccc
      541 tccggtcgtc gagcacctcg atgcgggtgt cgaggccccg ccgctgcagc tcgtcggccg
      601 tggagtggcc cacccgggcc cagggccacc ggtccagcga gcgcccgagc agcagcgcct
      661 gggcccgggt ctggcgcgtg acctccgtta gcccctgggc cagggtgggg gcctggacga
      721 tgcggatctc cgcaccgaga cgctgggcct cctggagcca cacctgcacc tgctcggtgt
      781 cctcggtgag ctgggagccc ccggtctcca catggacggc gatccagggg gcggacagct
      841 cacgggccat gcggaatccc gcctggatga ggcggagggc gcgggcctcg gatccgaggg
      901 ccacgagaat gggccggggc gaggcttcca tggaggtcca gggtaaacgg gggggccgca
      961 taaaaagggc gtaaaaagtg cccgcggcgg acccgcgtca cagggcccgt tctgcatact
     1021 tcggccatcc gtgaaatccg gatgaggagg ttgtctttat ggcgcccatg ccgttgaatg
     1081 tcgggaacac agcgttcatg ctgctctgcg caagcctggt catgctcatg accccagggc
     1141 tcgccttctt ctatggcggc ctcgtcggcc gcaagaacgt gctgacgatc atgacccaga
     1201 gcttcgtgtc gctgggctgg acgacggtgc tgtggttcgc cttcggctac tcgatgtgct
     1261 tcggccccac ctggcatggc atcgtgggcg acccctccca ctacgccttc ctgaagggca
     1321 tcaccctcaa caccatgtac acgggcaatg acgcgggcat cccgctgatc gtccacgtgg
     1381 cctaccagat gatgttcgcc atcatcaccc cggccctcat caccggcgcc ttcgcgaacc
     1441 gggtgacctt caaggcctac ttcctgttcc tcaccggctg gctgatcttc gtctacttcc
     1501 ccttcgtcca catggtctgg agtcccgagg gcctcctcgc caagtggggc gtcctcgatt
     1561 tcgcgggtgg cgtcgtggtg cacaacacag ccggattcgc ggccctggcc tccatcctct
     1621 acgtgggacg gcgcaaggtg atcgagaacg tgccgcacaa cattccgctc atcgccctgg
     1681 gcacgggcct gctctggttc ggctggtacg gcttcaacgc cggttccgaa ctgcgggtgg
     1741 acagcgtca
//
LOCUS       DATGWW010000518         2181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_263178, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000518 DATGWW010000000
VERSION     DATGWW010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263178"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1311
                     /locus_tag="VK150_07525"
     CDS             <1..1311
                     /locus_tag="VK150_07525"
                     /inference="COORDINATES: protein motif:HMM:NF013707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HLP31195.1"
                     /translation="AEAIDELGIQDRTVAISPVGCSVFLYYYFDVGNSQAAHGRAPVV
                     ALGHKFANPESVVISYQGDGDLASIGLAETVATAQLGAPITVIFINNAIYGMTGGQMA
                     PTTLMGQTSSTSPSGRNEYNGQPMKMAELIAGLDGPVYVERVALFDAKQRIKAKKAIQ
                     KAIKLQVEGRGYSFIEVLAECPTHLKMDPEATSKWVKECMEPVYPLGVKKDLTVDPWF
                     KRNPPCFKGEKLLNLAGATSEHPERHASGFPTHLAPHDISLKLAGSGGDGAQTAAMLI
                     ARAAINEGYDATHIPSYGPESRGGTSYADVHVAEEEVLNPGSPDPQVLIAFNAPSLAK
                     FGPAVRKGGVVIYDSSVVTEAPKLDPSIQVFPVPFTGIATDLGKAVVKNIVALGALQA
                     ATNIFPKDTMLTAIRVALKDKCALIPLNEEAFAWGIKSVEALRN"
     gene            1441..1704
                     /locus_tag="VK150_07530"
     CDS             1441..1704
                     /locus_tag="VK150_07530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31196.1"
                     /translation="MMDTAIQTTLTPEEWKIVMALREIPDSPLRAKVSGLLGELVRFI
                     QQPRCLGMQSDGFPCGTPNTSCEECQQMLKVLDDLAARVPAQG"
BASE COUNT          394 a          803 c          658 g          326 t
ORIGIN      
        1 gccgaggcca ttgatgaact cggcatccag gaccgcacgg tggccatcag ccccgtgggt
       61 tgctccgtgt tcctctacta ctacttcgat gtgggcaaca gccaggcggc ccacggccgc
      121 gcccccgtgg tggccctggg ccacaagttc gccaaccccg agagcgtggt catcagctat
      181 cagggcgacg gcgacctggc ttccatcggc ctcgccgaaa ccgtggccac cgcccagctc
      241 ggcgccccca tcaccgtcat cttcatcaac aacgccatct acggcatgac cggcggccag
      301 atggccccca ccaccctgat gggccagacg agctccacca gcccctcggg ccgcaacgag
      361 tacaacggcc agcccatgaa gatggccgag ctcatcgccg gcctcgacgg ccccgtctac
      421 gtggagcgcg tggcgctctt cgacgccaag cagcgcatca aggccaagaa ggccatccag
      481 aaggccatca agctccaggt ggagggccgc ggctactcct tcatcgaagt gctggccgag
      541 tgccccacgc acctgaagat ggaccccgaa gccacctcca agtgggtcaa ggagtgcatg
      601 gagcccgtct atcccctggg cgtgaagaag gacctcacgg tggatccctg gttcaagcgg
      661 aacccgccct gcttcaaggg cgagaagctg ctcaacctcg cgggcgccac ctccgagcac
      721 cccgagcgcc acgcgagcgg cttccccacc cacctcgccc cgcacgacat ctccctgaag
      781 ctcgcggggt ccggcggcga cggcgcccag accgcggcca tgctcatcgc gcgggccgcc
      841 atcaacgagg gctacgacgc cacgcacatc cccagctacg gccccgagag ccgcggcggc
      901 acttcgtacg ccgacgtcca cgtggccgag gaggaggtgc tgaaccccgg gtcccccgat
      961 ccgcaggtgc tcatcgcctt caacgccccc agcctggcca agttcggccc ggccgtgcgc
     1021 aagggcggcg tggtcatcta cgacagctcc gtggtcaccg aggcccccaa gctggatccc
     1081 agcatccagg tcttccccgt gcccttcacc ggcatcgcca ccgacctggg caaggccgtg
     1141 gtgaagaaca tcgtggccct gggcgccctc caggccgcca cgaacatctt ccccaaggac
     1201 accatgctca cggccatccg cgtggccctc aaggacaagt gcgccctgat ccccctcaac
     1261 gaagaagcct tcgcctgggg catcaaatcg gtggaagcgc tccgcaactg attcgccacg
     1321 gagacacgga gggcacggag gcatcacgga ggaacacccg cagccagtgg ttctccgtgg
     1381 gcattcccca gtgttctccg tgtctccgtg gtgaatccaa ttcttcctca ggaggcaacc
     1441 atgatggaca ccgccatcca gaccaccctc acgcccgagg aatggaagat cgtcatggcc
     1501 ctccgggaga ttcccgacag ccccctccgc gcgaaggtct ccggcctgct gggcgagctg
     1561 gtgcgcttca tccagcagcc ccgctgcctc ggcatgcaga gcgacggctt cccctgcggc
     1621 acgccgaaca ccagctgcga ggagtgccag cagatgctga aagtcctcga cgacctcgcc
     1681 gcccgggtgc ccgcccaggg gtgacgccaa gaccagcctg gcattctgtc cgcccccggg
     1741 attccgtcgg cggaacggtg aagctgcagg ctgacgccag gctcgaagaa tgctgacgcg
     1801 atctggcgag atccgtcagg gattcgaccg accccgaggt cgagtggctt tccacggacg
     1861 cgcccttgac gcctccggct cccgaaccca tgtatggggt tttggggtgt ggtgccccgc
     1921 ccgtttttat tgagtctctg attccgaccc cgggtccgat gcaccagggg tgcttcgcct
     1981 caaacccccg gaatggtcgc cagggccacg ggttggaaca ggctcggaga tgagcgccgc
     2041 cgtcgtcgcc gacagtgggg cggcttgacc atgccacggg agcgtcccat gagctgtccg
     2101 gcctcagcgc cttgcggaac tcagcgatgt ccgagcatcc catgcagccc aagggacggg
     2161 gagatgcacc ctggccgatc a
//
LOCUS       DATGWW010000519         2949 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_447667, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000519 DATGWW010000000
VERSION     DATGWW010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2949
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447667"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..893
                     /locus_tag="VK150_07535"
     CDS             <1..893
                     /locus_tag="VK150_07535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31197.1"
                     /translation="QCATAWITLGDLLYRLLLIDPQGHTQGQAEAERHFRKALELVPD
                     HPHCGYLLTQLKVDSGDQREALYVLQRSLRAHPQNPALYTGLAYSARCAGLLDLAERA
                     LARRDQLVFSELQPNATENAYLYQGDFARFEAGLVEKPGDPRNAVVRFYRGYTALIRG
                     ERAAASYWFAQAQALPEGFAQFQQLSGVYEAIAEGHLSMAAARMRDLENERIGLRVPD
                     GEFTFKMAEASALMGDGNLALVQARRAFSQGFGCTRWYRASPFLASVRGTARWNALIQ
                     HLEERQQMLEAHFSPAQFGL"
     gene            905..2422
                     /locus_tag="VK150_07540"
     CDS             905..2422
                     /locus_tag="VK150_07540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31198.1"
                     /translation="MPKLPPIRSPRALLFLGLAFLLLLGGGSGLAWLLARQGVRAPLR
                     VLLITPAPEPDAGLDPAQSRAIGALIQDHLELYAGCAVTSVTGAPADLSPFRGQARTL
                     LLQIDPRRRGAELDLAFRYVWGRDLTKGVPAPWVVRKPAGGSPAQAFDAFFRAFPQTV
                     QASGSGLVPKSAPVFWDLIQSGAWRLQNHHLDEAMALAEEATRREPDCASTWVLLGNL
                     RYRWMLNSPAAFRQVQADTEAHLQRALALAPGHPRAIFLISLIKADNGNQREALDLLL
                     RARRRHPHNPTFLTGIAYAARGAGLLPLARRAMDLRDALAFTALQPQAVDITCLYTGE
                     IPRFEASLQEQPGHLRSTSGVLPFYRGYLALVRGDRELALREFRAAADLDHGYPNIMR
                     LSEIFELILDGRKDDAWQKLREYDQERIGMREPDGEFTIRLAEAYALMGDRASAMDMA
                     SRAFARGFGCTAWYERSPMLEPLRGLPKWKALMQHLRERQALMEDRFPVGLLEDN"
     gene            2507..>2949
                     /locus_tag="VK150_07545"
     CDS             2507..>2949
                     /locus_tag="VK150_07545"
                     /inference="COORDINATES: protein motif:HMM:TIGR00640.1"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HLP31199.1"
                     /translation="MPTLTAPDTATAEGYTPRHKVRFVTAASLFDGHDASINIMRRIL
                     QATGCEVIHLGHNRAVQDIVDTAIQEDAQGIAVSSYQGGHVEYFKYMVDLLRERGAGH
                     IQVFGGGGGVIVPDEIRELEAYGVARIYSPEDGRNMGLQGMIDDMV"
BASE COUNT          444 a         1076 c          990 g          439 t
ORIGIN      
        1 cccaatgcgc cacggcctgg atcaccctgg gcgacctgct gtaccggctg ctcctgattg
       61 acccccaggg ccacacccag ggccaggcag aggccgagcg gcatttccgg aaggcgctgg
      121 aactggtgcc cgaccatccg cactgcggct acctcctgac tcagctcaag gtggattccg
      181 gcgaccagcg ggaggcgctg tacgtgctcc agcgcagctt gagggcccat ccccagaacc
      241 ccgccctcta cacggggctg gcctattcgg cccggtgcgc gggccttctc gacctggcgg
      301 aacgggcgtt ggcgcggagg gaccagctgg tgttttccga gcttcaaccc aacgccaccg
      361 agaacgccta cctctaccag ggcgacttcg cccgcttcga ggcagggctc gtggagaagc
      421 cgggggatcc ccgcaacgcc gtggtccggt tctaccgcgg ctacacggcc ctgatccggg
      481 gggagcgggc ggcggccagc tactggttcg cccaggctca ggcccttccg gaggggttcg
      541 cccagttcca gcagctctca ggggtctacg aggccatcgc cgaaggtcac ttgtccatgg
      601 ccgcggcgcg gatgcgggac cttgagaatg agcggatcgg cctccgagtc cctgatgggg
      661 aattcacctt caagatggct gaggccagcg ccttgatggg ggacggcaac ctggcgctgg
      721 tgcaggccag gcgcgcgttc agccagggat tcggctgcac ccggtggtac cgggcgagcc
      781 ccttcctcgc ctccgtgcgc ggcacggcgc gctggaacgc gctgatccag cacctggagg
      841 agcgccagca gatgcttgag gcgcacttct ccccggccca gttcgggctc taatctgagg
      901 ggccatgccg aagctgccgc cgatccgctc cccccgcgcc ctcctgttcc tggggctcgc
      961 cttcctgctg ctgctgggag gcggtagcgg cttggcttgg ctgctggcac gccagggtgt
     1021 gcgagcgccc ctgcgcgtcc tgctcatcac gcccgcgcca gagccggatg ccgggctgga
     1081 ccccgcccag agccgggcca tcggggcgct gatccaggat cacctggaac tctacgcggg
     1141 ctgcgccgtc accagcgtca ctggagcgcc tgccgacctg agcccgttcc ggggccaggc
     1201 tcggaccctg ctgctccaga tcgatcccag gcgccgcgga gcggaactcg acctcgcctt
     1261 ccggtacgtg tggggcaggg atctcacgaa gggcgtcccc gccccctggg tggtccggaa
     1321 acccgcgggc ggcagccccg cccaggcctt cgatgccttc ttccgggcct tcccccagac
     1381 ggtgcaagcc tcgggctcgg gcctggtgcc caagtcggcg cccgtgttct gggacctgat
     1441 ccagtccggg gcctggcggc tgcagaatca ccacctggat gaagccatgg ccctggcgga
     1501 ggaggccacc cgccgcgagc cggactgcgc cagcacctgg gtcctcctcg ggaacctccg
     1561 gtaccggtgg atgctcaaca gccccgccgc cttccggcag gtgcaagccg acaccgaggc
     1621 gcacctccag cgggccctgg ccctggcgcc ggggcacccc cgcgccatct tcctcatctc
     1681 gctcatcaag gccgacaacg gcaaccagcg cgaggccctg gatctgctgc ttcgggctcg
     1741 gcgccggcat ccccacaacc ccaccttcct caccggcatc gcctatgccg cgcggggcgc
     1801 gggcctgctc ccgctcgccc ggcgggcgat ggacctccgg gacgccctgg ccttcaccgc
     1861 gctccagccc caggccgtgg acatcacctg cctctacacc ggcgagatcc cgcgcttcga
     1921 ggccagcctc caggaacagc ccgggcacct gcggagcacc tcgggcgtgc tgcccttcta
     1981 ccgcggctac ctggccctgg tgcggggcga ccgggagctg gcgctgcggg agttccgcgc
     2041 ggccgccgac ctcgaccacg gctatccgaa catcatgcgg ctgagcgaga tcttcgagct
     2101 gatcctcgat ggccggaagg atgacgcctg gcagaagctg cgcgagtacg accaggagcg
     2161 catcggcatg cgggagcctg acggggagtt caccatccgg ctggcggagg cctacgcgct
     2221 gatgggcgac cgcgccagcg ccatggacat ggccagccgg gccttcgccc ggggcttcgg
     2281 atgcacggcc tggtacgagc gcagccccat gctggagccc ctccgcggcc tgcccaagtg
     2341 gaaggccctc atgcaacacc tgcgggagcg ccaggccctc atggaggacc ggttccccgt
     2401 cgggctgctg gaagacaact gaggccggat ttgaccttgg gtaaagccgg ccttcggccg
     2461 gcgccagagc cccggtagac tgggctttcg cccaaccggg ggatccatgc ccacactgac
     2521 cgcacccgac accgctaccg ccgagggcta cacccctcgg cacaaggtcc gtttcgtgac
     2581 cgccgccagc ctcttcgacg gccatgacgc cagcatcaac atcatgcggc gcatcctcca
     2641 ggccacgggc tgcgaggtga tccacctggg ccacaaccgg gccgtgcagg acatcgtgga
     2701 cacggccatc caggaagacg cccagggcat cgccgtgtcc agctaccagg gcggccatgt
     2761 ggagtatttc aagtacatgg tcgatctcct gcgggagcgg ggcgcggggc acatccaggt
     2821 cttcggcggc ggcggcgggg tcatcgtgcc cgacgagatt cgggagctgg aagcctacgg
     2881 cgtggcccgg atctacagcc ccgaggacgg ccggaacatg ggcctgcagg gcatgatcga
     2941 cgacatggt
//
LOCUS       DATGWW010000520         2203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_115632, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000520 DATGWW010000000
VERSION     DATGWW010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115632"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VK150_07550"
     CDS             complement(<1..272)
                     /locus_tag="VK150_07550"
                     /inference="COORDINATES: protein motif:HMM:NF013589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HLP31200.1"
                     /translation="MADLVPTARVLKSLTRDRFIRVSSIDASPLWDGVRRGHPHLDPA
                     ACACLTELLASTALLQGRTLFAERLQLLLKGSGQAKAVVADCWPDGT"
     gene            complement(275..2044)
                     /locus_tag="VK150_07555"
     CDS             complement(275..2044)
                     /locus_tag="VK150_07555"
                     /inference="COORDINATES: protein motif:HMM:NF013560.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M2 family metallopeptidase"
                     /protein_id="HLP31201.1"
                     /translation="MRLLPVFALGLPLMAQMAAPVQDRADRFLKLVNAGYQSLYYVAA
                     EANWAATSDVKPEHDAASEWAGKAFAAFNGNPALITEARELLTHRKDLKEVTVRQLER
                     VLLNAAEGPMTNPKLVAARVATETAQASTLNGFVWKMDGQPVSANQLDAILAKSSNLG
                     ERLKAWEVSKENGPALKEGLLKLRDLRNGCARELGYPDYFALQVAKYGLTTDEMMAFN
                     RKFLAELKPLYLQLHTWVKYEMAKKYGQPVPKAIPAHWINNRWSQNWTGFVKAVDFDP
                     YFKGWQPERIVKTAEAFYTGLGFDPLPATFWTKSDLYPLKPGETRKKNSHAFCNHLDL
                     ENDIRSLMSVEANSQWFETAHHELGHGYYFMCYTNPSVPPLLRDGANPSFHEGVGELI
                     ALATRQIPYLKSAGVLPADYKVNEMDVLLNDALEVAIPFMFWACGTMPEWEAEFYAKG
                     MPADQLNARWWKQVRALQGVEPPSPRGEQFCDAATKTHINDNPAYYYSYGWATVFKFQ
                     MHDHIARKILHQDPRATNYAGHKEVGAFLKQVLAKGATEDWRKVLKEATGEDLSTRAM
                     MEYFKPLMAWLEQQNKGRQIGWD"
BASE COUNT          337 a          694 c          769 g          403 t
ORIGIN      
        1 gtgccgtcgg gccagcagtc ggccaccacg gccttggcct ggccagagcc cttcaatagc
       61 agctggaggc gctcggcgaa gagcgtgcgg ccctggagga gtgcggtgga cgccagcaac
      121 tccgtgaggc aggcgcaggc cgcgggatcc aggtgcggat gcccccgccg gacgccgtcc
      181 cagagcgggc tggcgtcgat ggaagacacg cggatgaacc ggtcccgggt gagcgacttc
      241 agcacccggg ccgtgggaac caggtcggcc atgctcagtc ccaaccgatc tggcggccct
      301 tgttctgctg ttcgagccag gccatgaggg gcttgaagta ctccatcatg gcgcgggtgg
      361 agagatcctc gccggtggcc tccttcagca ccttccgcca atcctcggtg gcacccttgg
      421 cgagcacctg cttcaggaag gcgcccacct ccttgtggcc ggcgtagttc gtcgcgcggg
      481 gatcctggtg gaggatcttc cgcgcaatgt ggtcgtgcat ctggaacttg aagacggtgg
      541 cccagccgta gctgtagtag taggcgggat tgtcgttgat gtgggtcttg gtggcggcgt
      601 cgcagaactg ctcgccgcgc gggctcggcg gctccacacc ctggagcgcc cgaacctgct
      661 tccaccagcg ggcgttcagc tggtcggcgg gcatgccctt cgcatagaac tccgcctccc
      721 attccggcat ggtgccgcag gcccagaaca tgaaggggat ggccacctcc agcgcgtcgt
      781 tgagcagcac atccatctcg ttgaccttgt agtccgccgg caggacgccc gcagatttca
      841 ggtagggaat ctgccgggtg gccagcgcga tgagctcgcc cacgccctca tggaagctgg
      901 ggttggcgcc gtcccgaagc aggggcggca cgctggggtt cgtgtagcac atgaagtagt
      961 agccatggcc cagttcgtga tgcgcggtct cgaaccattg gctgttggcc tccacgctca
     1021 tgagcgagcg gatgtcgttc tccaggtcca ggtggttgca gaaggcgtgg ctgttcttct
     1081 tgcgcgtttc cccgggcttc agggggtaca ggtcggactt cgtccagaac gtggcgggca
     1141 ggggatcgaa gcccaggccg gtgtagaagg cctctgcggt cttcacgatg cgctcgggct
     1201 gccagccctt gaagtaggga tcgaaatcca cggccttcac gaagccggtc cagttctggc
     1261 tccagcggtt gttgatccag tgggcgggga tggccttggg cacgggctgg ccgtacttct
     1321 tggccatctc gtacttcacc cacgtgtgca gctgcaggta gagcggcttc agctccgcca
     1381 ggaacttgcg attgaaggcc atcatctcgt cggtggtgag accgtacttg gccacctgga
     1441 gggcgaagta gtcggggtag cccagctccc gggcgcagcc gttgcgcagg tcgcgcagct
     1501 tcaggagacc ctccttcagg gccgggccgt tctccttcga aacttcccag gccttgagac
     1561 gctcgcccag gttgctgctc ttggcgagaa tcgcgtccag ctggttggcc gacaccggct
     1621 ggccgtccat cttccagaca aagccgttca gggtgctggc ctgggccgtc tcggtggcca
     1681 cccgcgccgc caccaacttg ggattcgtca tgggaccttc ggcggcgttg agcagcaccc
     1741 gctccaactg gcggacggtg acctccttga ggtccttgcg gtgggtgagc agctcgcggg
     1801 cctcggtgat gagggccggg ttgccgttga aggccgcgaa ggccttgcca gcccactcag
     1861 aggcggcgtc gtgttcgggc ttcacatccg aggtggcggc ccagttggct tcggcggcca
     1921 cgtagtagag cgactggtag cccgcgttca cgagcttcag gaagcggtcc gcccggtcct
     1981 ggacgggcgc ggccatctgg gccatcaggg ggaggccgag ggcgaaaacg ggcagcaggc
     2041 gcatggcgac tcctcagagc cccctattgt gccttcgacg cggcgttccg tcagcacggc
     2101 aggaggatgc agaagctcga tccgaacccc tgctggctct gggcgcggat ctgcccccgg
     2161 tgcgccgcga ccaggcgctg gacgatggcc agcccgaggc cca
//
LOCUS       DATGWW010000521         2340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_86075, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000521 DATGWW010000000
VERSION     DATGWW010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86075"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..314)
                     /locus_tag="VK150_07560"
     CDS             complement(<1..314)
                     /locus_tag="VK150_07560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31202.1"
                     /translation="MRSLARSFLTSGLLALGLPMAAQSTLVSVIRQPRATAAEFTTPI
                     AEFNVKSERDPAHLHVGVGAGVRHWDDGDNALRFIVDANMVAEEVFMGLAAIVEVPPG
                     EGG"
     gene            complement(323..1309)
                     /locus_tag="VK150_07565"
     CDS             complement(323..1309)
                     /locus_tag="VK150_07565"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HLP31203.1"
                     /translation="MNLASIDLNLLVALEALLEERSVGAAGRRIGLSQPAMSHALRRL
                     RELLGDPLLVRSGAGMAPTPLAENLAPALSFALKRISDLLQTSAFEPETSTRNFRLGL
                     TDEAAFVVLPRLQAHLARHAPNVSLDVLPLGPGPEGITALGPKLDLAVTREDMLPQGF
                     RREPLFEDETVLALARPPGKRLTLMPFLAGPHVSVTASQNLPDPVDAWLATLGRSRRI
                     SVVVPHCIMALQLVSRSDLMAVLPRSLVARFRTGLGLVIHPLPIGTNPFVQFLLHPER
                     MDQDPGNAWLRQALLHLFRDERPAPRKRRATKTTWALSPKGPCKLNPGGSGR"
     gene            1431..>2340
                     /locus_tag="VK150_07570"
     CDS             1431..>2340
                     /locus_tag="VK150_07570"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HLP31204.1"
                     /translation="MIPETTVHHASAAPGLPPAMPETLWAACRVFVPLVLIANVAVEA
                     VPHVRGIAFVPQLRYVVMTPACALSAGLATFLYRFFRVRSDRPRWMLAGCLALLAMLV
                     LVLMGAFGPAGLARQAAFPVFAVAAALAFLAPRALARPSGRVGRVAAAAFGALALIGV
                     IAGLAGEQVEPAGPGAMAFDIPQATFDVAHKFMDFPDGTRIHYVDEGRGETLLFLHGN
                     PGWSFQWRELVSGLKSSYRCVVLDYPGFGLSIAPPGFGYTPGEQSRVVEAFVDRLGLQ
                     DLTLVMQDWGGPIGLGLAERRPELVRQ"
BASE COUNT          354 a          747 c          853 g          386 t
ORIGIN      
        1 ccgccctctc ctgggggtac ctccacgatg gcggcgagcc ccatgaagac ctcctcggcc
       61 accatgttcg cgtcgacgat gaagcgaagg gcgttgtccc cgtcgtccca gtgccgcacg
      121 ccggcaccca cgcccacgtg gaggtgggcc ggatcgcgct cggatttcac gttgaattcg
      181 gcgatgggcg tggtgaattc cgcggcagtc gccctgggct gccggatcac cgagaccagg
      241 gtggactggg cggccatggg cagacccaag gccaggaggc cggaagtgag gaaggaacgg
      301 gcgaggctgc gcatggagca ggttaccgac cggacccccc ggggtttagc ttgcacgggc
      361 ccttggggct gagggcccag gtggtcttcg tggcgcggcg cttcctgggt gctggacgct
      421 cgtccctgaa caggtgcagc agggcctggc ggagccaggc gttgccgggg tcctggtcca
      481 tgcgttcggg atgcaggagg aactggacga aggggttggt gccgatgggc agcgggtgga
      541 tgaccagccc cagtcccgtc cggaatcgcg ccacgaggct cctggggagc acggccatga
      601 ggtcagaccg ggagacgagt tggagggcca tgatgcagtg cggcaccacc accgagatgc
      661 gccgcgaccg gccaagggtg gccagccagg cgtccacggg atcgggtaga ttctgcgaag
      721 ccgtgaccga gacgtgaggt ccggccagga agggcatgag ggtgaggcgc ttcccgggcg
      781 gccgcgccag ggccagcacg gtttcatctt cgaacagcgg ctctcggcgg aacccctggg
      841 gcaacatgtc ttcgcgggtc acggcgagat ccagcttcgg accaagggca gtgatgccct
      901 ccggacctgg ccccagcggc agcacgtcca gggagacgtt cggcgcgtga cgggcgaggt
      961 gggcttgcag tcggggcaac accacgaaag cagcctcatc cgtgagtcca aggcggaaat
     1021 tccgcgtgct ggtttccggc tcgaaggccg aagtctgcag caggtccgag atccgcttca
     1081 gggcaaacga aagggccggg gccaggttct cagccagggg ggttggcgcc atgcccgctc
     1141 ccgagcgcac caggagggga tcgcccagca gctccctcag gcgacgcagg gcgtggctca
     1201 tggcgggctg cgagaggccg attcgccgcc cggcggcgcc cacgcttcgt tcctcgagca
     1261 acgcctcgag cgccacgagc aggttgaggt cgatggaagc taaattcatc aagcgaatac
     1321 caatcatgaa aacaatcaat ttcacgaatg atgcggtttc gcccatctta tcgccatcca
     1381 gccatccgtt tcccgccaag cacggatgac cttttcagga gggctcccgg atgatccccg
     1441 aaaccactgt ccatcacgcc tccgccgctc cgggcctccc gccggcgatg ccggagaccc
     1501 tctgggccgc ctgccgggtg ttcgtgcccc tggttctgat cgcgaacgtg gctgtggagg
     1561 cggtgcccca cgtccggggc atcgccttcg tgccccagct ccgctacgtg gtgatgacgc
     1621 ccgcctgcgc gctcagcgcc gggctggcga cgttcctcta ccgattcttc agggtccgtt
     1681 cggacaggcc gcggtggatg ctggccgggt gtctcgccct gctggcgatg ctggtgctgg
     1741 tgctgatggg cgccttcggt cccgcggggc tcgcgaggca ggccgcgttc ccggtcttcg
     1801 ccgtggcggc ggccttggcg ttcctggccc cccgtgcatt ggcgcgaccc tcgggccggg
     1861 tggggcgggt ggccgcggcg gcgttcggcg cgttggcctt gatcggggtg atcgcagggc
     1921 tggcgggtga acaggtggag ccggcgggcc ccggcgccat ggccttcgac atcccgcagg
     1981 ccaccttcga cgtggcccac aagttcatgg attttccgga tggcacgcgg atccattacg
     2041 tggatgaggg aaggggggag acgctgctct tcctgcacgg caacccgggc tggtccttcc
     2101 agtggcgcga gctcgtgagc ggtctgaaga gctcctaccg gtgtgtggtg ctggactatc
     2161 cggggttcgg gctgtccatc gcgccacccg ggttcggcta cacacctgga gagcagagcc
     2221 gcgtggtgga ggccttcgtg gaccgcctgg gcctgcagga cctcaccctc gtgatgcagg
     2281 attggggcgg gcccatcgga ttggggctcg ccgagcgccg gcccgagctg gtgcgccaac
//
LOCUS       DATGWW010000522         2413 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_263770, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000522 DATGWW010000000
VERSION     DATGWW010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263770"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(207..1034)
                     /locus_tag="VK150_07575"
     CDS             complement(207..1034)
                     /locus_tag="VK150_07575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31205.1"
                     /translation="MFHATLHSLGSKLVFLVAPALLAQSGPMPPPPLMLFIREEVKPG
                     HGAAHTATEAAWGRALARLKSGDHYLGLNALTGGGEAWFIVGYGSYAEWEARQNEFEK
                     QPAAKAEIERITQQDGEHLASSRTLLGAYRKDLSYGPPVEIGKMRYVRMRTFRVKQGQ
                     GPAFEAGVKTALAAYEKSRYAASFAFFEVAAGTGSPTFIVLRPLKSLAELDAMAESEK
                     AFQEALGEDGRKGMQKVFTDTVNAVENQLLAFNPKLSYPAPFVVASDPAFWTVKAEK"
     gene            complement(1245..>2413)
                     /locus_tag="VK150_07580"
     CDS             complement(1245..>2413)
                     /locus_tag="VK150_07580"
                     /inference="COORDINATES: protein motif:HMM:NF040138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HLP31206.1"
                     /translation="EIRGQILPASSTPANHPPTATITAPAGDVTIQSGQSVSFAGTAT
                     DPDGDAVTVLWSFGDGTTSALLNPGGHTYPMPGTYTVRLTATDAKGLADPNPPTRTIT
                     VQGAPVNLPPKGTITSPPGNVTIVAGQSVPFAGTVSDPNGDAVTVLWSFGDGGTSTLL
                     SPGNHVYTTPGTYTARLTATDAQGLADPNPPTRTITVQTVPVNQPPSATITAPMGNVS
                     ITAGQSVTFAGTASDPDGDTVTVLWAFGDGATSTLLSPGAHTYLAAGTYTVTLTATDA
                     KGLADPAPPTRTITVTPGGMAPTLTQLQTTIFTPLCTGCHGVGGDAGMNLSAGSAYSS
                     LVNVPATTRSGLRVVPGNPGASALVAQLAAGHRSVSAANQALISAWISAGALNN"
BASE COUNT          315 a          756 c          970 g          372 t
ORIGIN      
        1 cccggggtgg ccctggccga cgcccccttc tggacccccg cccaggccgc cttcctgcgc
       61 gagcaggtgg aggaggacgc cgactgggcc ggcctcatcg accgcctgga cagcgggctg
      121 cgcggccggg actgagccgc ccgcggcctt cctggagggc gccgaaagct gtctcccggc
      181 gccctccagg gggggatggg gatgagctac ttctcggcct tgacggtcca gaaggcgggg
      241 tcgctggcca ccacgaaggg cgcggggtag ctcagcttcg ggttgaaggc gagcagctgg
      301 ttctccacgg cgttcaccgt gtcggtgaag accttctgca tgcccttgcg cccatcctcg
      361 cccagggcct cctggaaggc cttctcgctc tcggccatgg cgtcgagttc cgccagggac
      421 ttcagcgggc gcagcacgat gaaggtgggc gagccggtgc ccgcggccac ttcgaagaag
      481 gcgaaggagg cggcgtagcg gctcttctcg taggcggcca gggccgtctt cacgccggct
      541 tcgaaggccg ggccctgccc ctgcttcacc cggaaggtgc gcatccggac gtagcgcatc
      601 ttgccgatct ccacgggcgg gccgtagctc aggtccttgc ggtaggcgcc caggagggtg
      661 cggctgctcg ccaggtgctc gccatcctgc tgggtgatgc gctcgatctc ggccttcgcc
      721 gcgggctgct tctcgaactc gttctggcgg gcctcccact cggcgtagct gccgtagccc
      781 acgatgaacc aggcctcgcc gcccccggtg agggcgttca ggcccaggta gtggtcgccg
      841 gatttcagcc gggccagggc ccgtccccag gcggcctccg tggcggtgtg ggccgcgccg
      901 tggccgggct tcacctcctc gcggatgaag agcatgaggg gcggcggcgg catggggccg
      961 ctttgggcga gcagggccgg cgcgacgaga aacaccagct tcgagccgag ggagtgcagc
     1021 gtggcatgga acatggcggc ccacctccaa gagggcggac ccgatgctag cccgccaccg
     1081 cttgcagtaa taggaaaaac actgttgtaa caacctgcca tgaacgtatt aatcccatgt
     1141 gatcgaggtg gcgcctggca caggtcctcc cctgtctggc cggccccaga agcatgggga
     1201 cggccaggca ggggaggagg gctggcgtgg ccgggcggtc cggcctagtt gttcagggcg
     1261 cccgcggaga tccaggcgga gatgagggcc tggttcgccg cggagacgct gcggtggccg
     1321 gcggccagct gggccaccag ggcgctggcg cccgggttgc ccggcacgac ccgcaggccg
     1381 gagcgggtgg tggccggcac gttcaccagg ctgctgtagg cgctgccggc gctgaggttc
     1441 atgcccgcgt ccccgccgac gccatggcag ccggtgcaga ggggggtgaa gatcgtcgtc
     1501 tgcagctggg tcagggtggg ggccatcccc ccgggggtca cggtgatggt gcgggtgggg
     1561 ggcgcggggt ccgccaggcc cttggcatcc gtggccgtca gggtgacggt gtaggtgccg
     1621 gcggcgaggt aggtgtgcgc gcccggcgac agcagggtgg aggtggcccc atccccgaag
     1681 gcccagagca cggtcacggt gtcgccgtca ggatcggagg cggtgccggc gaaggtgacc
     1741 gactgcccgg cggtgatgct gacgttgccc atgggcgccg tgatggtggc cgagggcggc
     1801 tggttcaccg ggacggtctg gacggtgatg gtccgcgtgg gcgggttcgg gtcggccagg
     1861 ccctgggcgt ccgtggcggt gaggcgggcg gtgtaggtgc cgggggtggt gtagacatgg
     1921 ttccccggtg acagcagggt cgaggtgccg ccatcgccga aggaccagag gaccgtgacc
     1981 gcgtcgccgt tgggatcaga gacggtgcct gcgaagggca cggactgtcc cgccacgatg
     2041 gtgacgttgc ccggaggcga ggtgatggtg cccttgggcg gcaggttcac gggcgccccc
     2101 tgcacggtga tggtgcgggt gggcggattc ggatccgcca gccccttggc gtcggtggcc
     2161 gtcagccgca ccgtgtaggt tccgggcatg gggtaggtgt ggccgccggg gttcagcagc
     2221 gcggaggtgg tgccgtcgcc gaagctccag agcaccgtga cggcgtcgcc gtcgggatcg
     2281 gtggcggtgc ccgcgaagga cacggactgc ccggactgga tggtgacgtc accggccggc
     2341 gcggtgatgg tggccgtggg cgggtggttc gcgggggtgg aggaggccgg gaggatctgc
     2401 ccccggatct cgc
//
LOCUS       DATGWW010000523         2195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_448324, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000523 DATGWW010000000
VERSION     DATGWW010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448324"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VK150_07585"
     CDS             <1..333
                     /locus_tag="VK150_07585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31207.1"
                     /translation="SIQGDQVTASDGFRLRLPGGAWSLQRGALALRSGPGSAWPVQAV
                     TRPPEAQLRGARRLAGAATLRPGWWDPAQRRLWMDLGPGRWLQVEGVTEAEAFRLLDQ
                     LLAPTSSS"
     gene            complement(303..806)
                     /locus_tag="VK150_07590"
     CDS             complement(303..806)
                     /locus_tag="VK150_07590"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HLP31208.1"
                     /translation="MTLQEELQLSKLPAPGVQLMLQLMLTREAIVRVQERLFETHGLT
                     IQQFNVLRIVRGGPTKGHPIYEIERRMIYRFANVTRLVDRLELQGLLKRVADPKDRRV
                     SRVVITPKGRRLMERLDEPVQALAARLTSCCDEAECLSLANHLERLREHCALQEGAQD
                     ELVGASS"
     gene            879..>2195
                     /locus_tag="VK150_07595"
     CDS             879..>2195
                     /locus_tag="VK150_07595"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HLP31209.1"
                     /translation="MPSIALSLINVTKRYGATAILDGLSFGLFQDEKVGLIGRNGAGK
                     STLFRLLSGDETPDTGEVVITQGMRIARLSQEPHFAPGATVRQALEAALADHAALLAR
                     HQAIHDALHGSAPGAEARLFDELQTIEHKLDHWGWDLLPRLKAAATTWGLDDLDVEVE
                     ALSGGWRKRVALAQAWLKEPDVLVLDEPTNHLDPDQVEKLEAWLQGYGGALLLITHDR
                     HLLDGVVTRMLELDEGAVRSYEGGYSDYLLEKSDREFREARLTEHMQNRLRREMAWLR
                     RGAKARTRKSKLRIQEVLDLKGTVEDRTRQEIRTGLAFAKGGNRSDALIRAEGVRFAY
                     SGGDDLLGGFDLSLQRGMRIALLGPNGSGKSTLLKVLLGELQPTAGDVARHPKLAITA
                     ISQGRGELDHGRSILDNLADRASVVDTGSGSLLAHVYLTRFGFPVDQ"
BASE COUNT          341 a          772 c          756 g          326 t
ORIGIN      
        1 tccatccagg gagatcaggt caccgcctcc gacggtttcc gcctgcgcct gcccggcggg
       61 gcctggtccc tgcagcgggg ggcgctggcg cttcgctcag gcccgggcag cgcctggcct
      121 gtccaggcgg tgacgcggcc cccggaggcc cagctccgcg gcgcgcggcg gctggcggga
      181 gccgcgaccc tccgcccggg atggtgggac cctgcccagc ggaggctgtg gatggacctg
      241 ggccccggcc gctggctcca ggtggagggg gtcacggaag ccgaagcgtt ccgcctgctg
      301 gatcagctgc tggcgccgac cagctcgtcc tgagccccct cctgcagcgc gcaatgctcg
      361 cgcagccgct ccaggtggtt cgccagggac aggcactccg cctcgtcgca gcagctggtc
      421 aggcgcgccg ccagggcctg cacgggctcg tccagccgct ccatgaggcg ccggcccttg
      481 ggggtgatca ccacgcggct cacccggcgg tccttgggat ctgccacccg cttgaggagg
      541 ccctgcagct caaggcggtc gaccaggcgg gtcacgttgg cgaagcggta gatcatgcgc
      601 cgctcgatct cgtagatcgg gtgccctttg gtgggcccgc cccgcacgat gcgaagcacg
      661 ttgaactgct ggatggtcag tccgtgggtc tcgaacagcc gttcctgcac gcggacgatg
      721 gcctcgcggg tgagcatgag ctggagcatc agctgcacgc ccggggcggg aagcttggag
      781 agttggagtt cttcttggag ggtcatggca tcctcgcgtg actttggggc caaggatcaa
      841 cccatccatg ggattctgaa aggtcgtagg agcccttctt gccttccatc gccctgagtt
      901 tgatcaatgt cacgaaacga tatggcgcga cagccattct ggacggattg agtttcggtc
      961 tctttcagga cgagaaggtg ggcctcatcg gccgcaacgg cgcgggaaag agcacgctct
     1021 tccgcctgct ctccggggac gagacccccg atacgggcga ggtggtcatc acccagggca
     1081 tgcgcatcgc ccgcctcagc caggagcccc atttcgcgcc cggggccacg gtccgccagg
     1141 ccctggaggc cgccctggcc gaccacgccg ccctgctcgc gcgccaccag gcgatccacg
     1201 acgccctcca cggatcggcc ccgggggccg aggcgcgcct ctttgacgaa ttgcaaacca
     1261 tcgagcacaa gctggaccac tggggctggg acctgctgcc gaggctgaag gccgccgcca
     1321 ccacctgggg cctggacgac ctggacgtgg aggtcgaggc cctctccggc ggctggcgaa
     1381 agcgcgtggc cctggcgcaa gcatggctga aagagcccga cgtgctggtg ctggacgagc
     1441 ccaccaacca cctggatccc gaccaggtgg aaaagctcga ggcctggctc cagggctacg
     1501 ggggcgccct gctcctcatc acccacgacc gccacctgct cgatggcgtg gtgacccgca
     1561 tgctcgagct ggacgagggc gcggtgcgaa gctacgaggg cggctacagc gactacctgc
     1621 tcgagaaatc cgaccgggag ttccgcgagg cccgcctcac cgagcacatg cagaaccgcc
     1681 tgcgccgcga gatggcctgg ctgcgccgag gggccaaggc ccgcacccgc aaatccaagc
     1741 tgcgcatcca ggaggtgctc gacctcaagg gcaccgtgga ggaccggacc cggcaggaga
     1801 tccgcacggg tctcgctttc gccaaggggg gcaaccgcag cgacgcgctc atccgggcgg
     1861 agggcgtccg gttcgcctac tccgggggag acgacctgct cggaggcttc gacctcagtt
     1921 tgcagcgggg catgcgcatc gcgctcctgg gacccaacgg cagcgggaaa tctaccctcc
     1981 tgaaggtcct gctgggcgaa ctgcagccca ccgccggcga cgtggcccgt catcccaagc
     2041 tggccatcac cgccatctcc cagggccggg gcgagctcga ccacggccgc agcatcctgg
     2101 acaacctggc ggaccgggcc tcggtggtgg acaccggcag cggctcgctg ctggcccacg
     2161 tctacctcac ccgcttcggc tttcccgtgg accag
//
LOCUS       DATGWW010000524         2502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_86516, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000524 DATGWW010000000
VERSION     DATGWW010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86516"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..787)
                     /locus_tag="VK150_07600"
     CDS             complement(<1..787)
                     /locus_tag="VK150_07600"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HLP31210.1"
                     /translation="MQAQSAQTRAKVPASIPRYQPAVQVKGPIDLVGTDALSDLGDEW
                     ASVFRRIHPDANLIYRAKLTKDAVKGFLDGTSLLILTGREFTQDETKAFQAKFGYMPM
                     RIPVCLDANIVFVNKTNPIASISMEQLDAIFSKSRLGGAKSPAVTWGDLGLRGEWAKL
                     PITAYTRGAGTATRTSIAEKLLLNGEFRQGIQDRDDASALAEAVMTDQAGIAIATMSS
                     WYVANKVLPVVPYHGEDARLPNQENVTTSKYPMPRLYYAYLNRT"
     gene            1174..1539
                     /locus_tag="VK150_07605"
     CDS             1174..1539
                     /locus_tag="VK150_07605"
                     /inference="COORDINATES: protein motif:HMM:NF025890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HLP31211.1"
                     /translation="MIRAPRLAMLFCGLLFTWTASIQGAGAQGEYPLPPHHVKAGVHC
                     FDCHQEEKPTKKAVASASCMTCHGDYPAMKALTKDAKPNPHDSHKGEVACTECHRQHK
                     PAVVMCLDCHEGKYKFRIK"
     gene            complement(1532..>2502)
                     /locus_tag="VK150_07610"
     CDS             complement(1532..>2502)
                     /locus_tag="VK150_07610"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HLP31212.1"
                     /translation="ALGDILRVLPAWANLREAFPDARFRAVVEDRHAFLLEPMPWLEP
                     VVVRRRKLSNPLVALGELNRVAGLVRGAEASLDFHGILKAALIPRLAGISERWGDGVT
                     KEFAGTLQSHPLPFRHQTRYQQALGLAEAFGRSRGVEGLGRFRPVLKEVALPDAGDIW
                     APSARPRIVLVPGASRRGAIKRWPLRHWIGLAGMLKASCDLRWSLGPEEEDLRGWLPE
                     ATGVAALPRLGFWQLASALRQAQKVVAPDTGLLHLAVVLGVPALGLYGSSDPVVAGLP
                     QEAGRVLRTGISCAPCRERSCQRRQCLEDLLPEWVASALMETSAAT"
BASE COUNT          404 a          882 c          827 g          389 t
ORIGIN      
        1 gggtgcggtt caggtaggcg tagtagaggc ggggcatggg gtacttgctg gtggtgacgt
       61 tctcctggtt cggcaggcgg gcgtcctccc cgtggtacgg aaccaccggc agcaccttgt
      121 tggcgacgta ccaggacgac atggtggcga tggcgatgcc cgcctggtcg gtcatgaccg
      181 cctcagccag cgcggaggcg tcgtcccggt cctggatgcc ctgccggaac tccccgttga
      241 gcagcagctt ctcggcgatg gaggtgcggg tggccgttcc cgcgccgcgg gtgtaggccg
      301 tgatgggcag cttggcccat tcgccgcgga ggccaaggtc cccccaggtg accgcgggtg
      361 acttggcgcc gcccagccgg gacttggaga agatggcgtc gagctgctcc atgctgatgc
      421 tggcgatggg gttggtcttg ttcacgaaga cgatgttcgc gtcgaggcag accgggatgc
      481 gcatgggcat gtagccgaac ttggcctgga aggccttggt ctcgtcctgg gtgaattccc
      541 ggcccgtgag gatcaggagg ctggtgccgt ccagaaatcc cttcaccgcg tccttggtca
      601 gcttggcgcg gtagatcagg ttcgcgtccg gatggatgcg gcgaaacacg ctggcccact
      661 cgtcgccgag gtcggagagg gcatcggtgc ccaccaggtc gatgggcccc ttcacctgca
      721 ccgcgggctg gtagcgcggg atcgaagcgg gcaccttcgc ccgcgtctgg gcagactgcg
      781 cctgcaacca cccgccgcag gccaaacctg cggccaggat caggcctgaa acgacacgcg
      841 cgcggttcac gttcatggga tccctctcaa tcgctgtcat cggcccgcca gcccatgccg
      901 cggttcttca ggagaacccc agccggctgg tcaaggtggc aggccacgtc actcataaat
      961 gccctacggg tcatgatcgt acacccgttc atcccgcgcc ccggcgccac tccggattcg
     1021 tgatttaaat cactccagca tcatcaatac gctccaggcc tgcatctgcg ctctccgggg
     1081 ttgctcggcg tccggatgtc ccccgcttcc cctccggtag actgcactcg ccccgatggc
     1141 ccccgccacg ccgaatcgac cgaggtatcc cacatgatcc gcgccccccg tctcgccatg
     1201 ctgttctgcg gcctgctgtt cacctggacc gcttccatcc agggcgccgg agcccagggc
     1261 gaatacccgc tgccccccca ccatgtgaag gcgggcgtcc actgcttcga ctgccatcag
     1321 gaagagaaac ccaccaagaa ggcggtggcg tcggcctcct gcatgacctg ccacggggac
     1381 taccccgcga tgaaggccct gaccaaggac gccaagccca atccccatga ttcgcacaag
     1441 ggcgaggtgg cctgcaccga gtgccaccgg cagcacaagc ccgccgtggt catgtgcctg
     1501 gattgccacg aagggaagta caagttccgg atcaagtagc ggcgctggtt tccatcaagg
     1561 ccgaggccac ccattccggc aggaggtcct cgaggcactg ccgccgctgg caggatcgct
     1621 cccggcacgg ggcgcagctg atgcccgtgc gcagcacccg gccggcctcc tgggggagcc
     1681 ccgccaccac cggatcgctc gatccgtaga ggccaagagc tggcacgccc agcaccaccg
     1741 ccaggtgcag caaccccgtg tccggcgcca ccaccttctg ggcctgccga agggccgaag
     1801 ccagctgcca gaaacccagc cggggcaagg ccgcgacgcc ggtggcttcg ggcagccacc
     1861 ctcgcaagtc ctcctcctcc ggtcccaggg accagcgcag atcacagctc gccttcagca
     1921 tcccggccag tccgatccag tgcctcaggg gccagcgctt gatggcgccg cgccgggagg
     1981 ctccaggcac gagcacgatg cggggccggg cagacggcgc ccagatgtcg ccggcgtctg
     2041 gcagcgcgac ctccttcagc accgggcgga accgacccaa cccctcgacg ccgcggctgc
     2101 gtccgaaggc ttcggccagg cccagggcct gctggtagcg ggtctggtgc cggaacggca
     2161 ggggatggga ttgcagcgtt ccggcgaatt ccttcgtgac gccgtcgccc cagcgctcgg
     2221 agatgcccgc cagccgcggg atcagcgcag ccttcaggat gccgtggaaa tccaggctgg
     2281 cttcggcgcc ccggaccagg cccgccaccc ggttcagctc gccgagcgct actagcggat
     2341 tcgagagctt cctgcgccgc accacgaccg gctccagcca gggcatgggc tccagcagga
     2401 aggcgtggcg gtcctcgacc accgccctaa atctcgcgtc ggggaaggcc tcccgcaggt
     2461 tggcccaggc gggcagcacc cggaggatgt cgccgagggc gg
//
LOCUS       DATGWW010000525         5417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_264021, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000525 DATGWW010000000
VERSION     DATGWW010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5417
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264021"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..865)
                     /locus_tag="VK150_07615"
     CDS             complement(<1..865)
                     /locus_tag="VK150_07615"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HLP31213.1"
                     /translation="MRARRIFALASLLTAFPVAAQTAPYFGQPLPGREAVPFAPDSLN
                     SGLATRDIALTPDGTEIYVGVFLPGFGKAVILETRQVAGRWTAPEVASFSRDPRWRCL
                     EPCISPDGRRFFFVSDRPTDPSATQPGRFGIWMMAREGASWGEARRLPEAVNGTVNAF
                     YPSVTRDGALHFLREEGQGGWVMRSTWKDGAWSPAEKLPDPFNRSANQANPRVDPEGR
                     FVLVPMAGRPDSLGGADYYAYFRREDGSWTEPVHLGPTVNSAARDEFSINLSPDGKVA
                     FFGSNRTLPRLE"
     gene            complement(951..2993)
                     /gene="uvrB"
                     /locus_tag="VK150_07620"
     CDS             complement(951..2993)
                     /gene="uvrB"
                     /locus_tag="VK150_07620"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: protein motif:HMM:NF003673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HLP31214.1"
                     /translation="MAKAIPFKLHAPYSPAGDQPEAIAQLVEGLQRGDRCQTLLGVTG
                     SGKTYTMASTIARAGRPALIFAPNKTLAAQLFSEFKQFFPENAVEYFVSYYDYYQPEA
                     YVPERDLFIDKDAKINEELEKLRLSATRCLLERRDTIVVASVSCIYGLGDPSSYLNLS
                     VTLKTGQTIDRAMLLRDLVAIQYQRNHLSFEPGIFRVRGDVVEVYPAYEDVAYRIELW
                     GDEVERLSKVDPLRGVVIEKLDELTIWPKTHYVTPEDKLKTAIHDIKAELEARENVFR
                     ADGKIVELQRLHQRVIYDVEMMKEMGHCSGIENYSRFLDGRQPGQPPHTLLDYFPEDF
                     VVFMDESHVATGQLHGMYNGDRSRKTTLVDYGFRLPSALDNRPLKFEEFESRVKQVVY
                     VSATPGDYELQQCGGAFVEQVVRPTGLVDPLVEVRPVGTQVDDLLEEIRKVVARDERV
                     LVTVLTKKLAEQLTAYYQELGIKAEYLHSEIDTLERVELLKNLRRGVFDVLVGINLLR
                     EGLDLPEVSLVAILDADKEGFLRNTRSLIQTIGRAARHVSGKAILYADVMTGSMKQAI
                     GETERRRQKQLAHNAAHGITPETVKRNLDDVMGEALAREFINVTKEERAAEEPLLYLE
                     EKHFEREVAKLEKRMKELASHMKFEEAAEIRDRINHARRERLLDVTAGVPATGPAQ"
     gene            complement(3060..4211)
                     /locus_tag="VK150_07625"
     CDS             complement(3060..4211)
                     /locus_tag="VK150_07625"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA desaturase"
                     /protein_id="HLP31215.1"
                     /translation="MANQARRSLLNTFFLLGTLALALILVPLKLALQGLRWSEVGMLA
                     LMYTLVGLSVTIGYHRLFSHRSFRAAWPLRLGVLLFGAAAFENSALWWCSDHRQHHRH
                     VDDPARDPYTISRGFWYAHWLWVMDGEVRPLEGVQDLQRDPLIRWQHRYHFWIGAAVA
                     LIPVYVGLATGHVWGHLVMGLLLRIVLTHHSTFLINSAAHRWGTQPYSDANSARDNGL
                     LAPLTFGEGYHNFHHMWQWDYRNAARWYQWDPGKWLISAFAGVGLAHGLRRTPETDIR
                     KARVAMEAKRLASILAGASPGLADGLVDRLNRAKGRLDQALGTLQDHREAWVARKVEW
                     KRRGEAKGPDWRRLREAWKADQARCRRDLREAWCAWKATRMQVRDIRCV"
     gene            complement(4280..>5417)
                     /gene="fabF"
                     /locus_tag="VK150_07630"
     CDS             complement(4280..>5417)
                     /gene="fabF"
                     /locus_tag="VK150_07630"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: protein motif:HMM:NF005589.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HLP31216.1"
                     /translation="GPITKLDVSAFPCRIGGEVKGFEPDKYIDRKEQKKMDIFIQYAL
                     GAAHEAWVDAGFDQIELTKAEREVFGTYIGSGIGGLSTIWDEANGYRGPRRTSPFFIP
                     SLIVNLASGQASIKYGLQGPNSAVATACATGAHAIGDAARLIAFGYADRMMAGGSDSV
                     VNQLGVGGFAAMRALSTRNDEPERASRPFDVDRDGFVMGEGAGIVILEEYELAKARGA
                     KIYAEVAGYGMSGDANHITTPAPEGEGGQRVMRAAIKDADIAPEQVGYVNMHGTSTPV
                     GDKLECTAIQKVFGDHAKTIKVSSSKSMHGHLLGAAGGLETIVAVMAVKTGKIPPTIN
                     VDHQDPECDLDVTPNVAGTFDAEYAMNNGFGFGGTNGCLVLRKV"
BASE COUNT          821 a         1837 c         1832 g          927 t
ORIGIN      
        1 cctccagccg cgggagggtc cggttgctgc cgaagaaggc caccttgccg tccgggctca
       61 ggttgatgga aaactcgtcc cgggccgcgc tgttcacggt ggggccgaga tggacgggct
      121 cggtccagga gccgtcctcg cggcggaagt aggcgtagta gtccgccccg cccagggaat
      181 ccggccggcc cgccatgggc acgagaacga aacgcccctc ggggtccacc cgggggttgg
      241 cctggttggc gctccggttg aaggggtcgg ggagtttctc cgccgggctc caggcgccat
      301 ccttccacgt cgagcgcatc acccagccgc cctgcccctc ctcccgcagg aaatgcagtg
      361 cgccgtcccg ggtgacggaa gggtagaagg cattgacggt gccgttgaca gcctcaggca
      421 gccgccgggc ctcgccccag ctggccccct cccgggccat catccagatg ccgaagcggc
      481 cgggttgggt cgcgctggga tccgtgggac gatccgacac gaagaagaag cgccggccat
      541 cgggactgat gcagggttcg aggcaccgcc acctcggatc tctcgagaag gaggccactt
      601 caggggccgt ccagcggccc gccacctgac gcgtctccag gatcaccgcc ttgccgaagc
      661 ccgggaggaa gacgcccacg tagatctcgg taccgtcggg cgtcagcgcg atgtcgcggg
      721 tggccaggcc ggagttcagg ctgtctggcg cgaagggcac cgcctcccgc cctggcagcg
      781 gctggccgaa gtagggcgcg gtctgggcgg ccaccggaaa agcggtcagc aggctggcga
      841 gggcgaagat ccgtcgagca cgcatggaac ctcccggagt gccccatggt gacaccctcc
      901 caccagcggt tggggcaccc cggagccagc cgtgaacttc ccggggcgag ctactgggcg
      961 ggccccgtgg cgggcacgcc ggcggtcacg tccagcagcc gctcccggcg ggcatggttg
     1021 atccggtcgc ggatttccgc cgcctcctcg aacttcatgt gggaggccag ctccttcatg
     1081 cgcttttcca gcttcgccac ttcgcgctcg aagtgcttct cctccaggta gagcagcggc
     1141 tcttcggcgg cccgctcctc cttggtgacg ttgatgaatt cccgggccag ggcctcgccc
     1201 atgacgtcgt ccaggttgcg cttcacggtc tcgggggtga tgccgtgcgc ggcgttgtgg
     1261 gcgagctgct tctgcctgcg gcgctccgtc tcgccgatgg cctgcttcat ggaaccggtc
     1321 atcacgtccg cgtagaggat ggccttgccg ctcacgtggc gggccgcacg gccgatggtc
     1381 tggatgaggc tgcgggtgtt gcggaggaag ccctccttgt ccgcgtccag gatggccacc
     1441 aggctcactt ccggaaggtc caggccctcc cgcagcaggt tgatgcccac gagcacatca
     1501 aacacgccgc ggcgcaggtt cttcagcagc tccacccgct caagcgtgtc gatctcgctg
     1561 tgcaggtact cggccttgat gcccagctcc tggtagtagg ccgtgagctg ctccgccagc
     1621 ttcttggtga gcacggtgac cagcacccgc tcgtcccgcg ccaccacctt gcggatctcc
     1681 tccagcagat cgtccacctg ggtgcccacg ggacgcactt ccacaagggg atccaccaga
     1741 cccgtgggcc gcaccacctg ctccacgaag gcgccgccgc actgctgcag ctcgtagtcg
     1801 ccgggggtgg cggagacgta gaccacctgt ttcacgcggc tctcgaattc ctcgaacttg
     1861 aggggccggt tgtccagcgc cgacggcagg cggaagccgt agtccaccag ggtggtcttc
     1921 cgcgagcggt cgccgttgta catgccgtgc agctggcccg tggccacgtg gctctcgtcc
     1981 atgaagacga cgaagtcctc ggggaagtag tccagcagcg tgtggggcgg ctggccgggc
     2041 tggcggccgt ccagaaagcg gctgtagttc tcgatgccgc tgcagtggcc catctccttc
     2101 atcatctcca cgtcgtagat gacgcgctgg tggaggcgct gcagctcgac gatctttcca
     2161 tcggcgcgga acacgttctc ccgggcctcc agctccgcct tgatgtcgtg gatggcggtc
     2221 ttcagcttgt cctcgggcgt cacgtagtgg gtcttgggcc agatggtgag ctcgtccagc
     2281 ttctcgatca ccacgccccg cagcggatcc accttcgaca gccgctccac ctcgtcgccc
     2341 cagagctcga tgcggtaggc cacatcctcg taggccggat agacctccac cacatcgccg
     2401 cggacccgga agatgcccgg ctcgaagctc aggtggttgc gctggtactg gatggccacc
     2461 aggtcgcgca gcagcatggc gcggtcgatg gtctggcccg tcttcagggt cacggacagg
     2521 ttcaggtacg agctgggatc gcccaggccg tagatgcagc tgacggaggc caccacgatg
     2581 gtgtcgcggc gctccagcag gcagcgggtg gcgctgaggc gcagcttctc cagctcctcg
     2641 ttgatcttcg cgtccttgtc gatgaacagg tcccgctcgg gcacgtaggc ctcgggctgg
     2701 tagtagtcgt agtagctgac gaagtactcg acggcgttct ccgggaagaa ctgcttgaac
     2761 tcgctgaaga gctgggcggc cagggtcttg ttgggcgcga agatgagcgc cgggcggccc
     2821 gcccgggcga tggtgctggc catggtgtag gtcttgcccg atccggtcac ccccagcagg
     2881 gtctggcagc ggtcgccccg ctgcagtccc tccaccagct gggcgatggc ctcgggctgg
     2941 tccccggcgg gagagtacgg cgcgtggagc ttgaacggaa tcgctttggc catgggaaac
     3001 cagaaaacca ccaagcggcg aatacgggaa gggttctttt cgcctttcct tcgtgtcgcc
     3061 tagacgcagc gaatgtcccg cacctgcatt ctcgtggcct tccaggcgca ccaggcctcc
     3121 cggaggtctc gccggcagcg ggcctggtcc gccttccacg cctcacgcaa acggcgccaa
     3181 tcgggcccct tggcttcacc ccggcgcttc cactcaacct tccgcgccac ccaggcttcc
     3241 cggtggtcct gcagggttcc cagggcctga tccagtcgtc ccttggcccg gttcagccgg
     3301 tccaccaggc cgtccgccag accgggcgac gccccggcca ggatcgaagc caggcgcttg
     3361 gcctccatgg ccacccgcgc cttccggatg tccgtctccg gggtccttct caacccgtgg
     3421 gccagaccca ccccggcgaa cgcggagatg agccacttcc ccgggtccca ctggtaccac
     3481 cgcgcggcgt tccggtagtc ccactgccac atgtggtgga agttgtggta cccctccccg
     3541 aaggtgagcg gcgccagcag tccgttgtcc ctggcgctgt tggcgtccga atagggctgg
     3601 gtgccccagc ggtgggccgc ggaattgatg aggaaggtgc tgtgatgagt cagcacgatc
     3661 cgcagcagca ggcccatgac caggtgcccc cagacatggc ccgtggccag accgacgtag
     3721 acgggaatga gcgccaccgc cgcgccgatc cagaaatggt agcggtgctg ccagcggatg
     3781 agcgggtccc gctggaggtc ctgcacaccc tccaggggcc gcacttcgcc gtccatcacc
     3841 cacaaccaat gggcgtacca gaagccgcgg gagatggtgt agggatcgcg ggccggatca
     3901 tccacgtggc gatgatgctg ccggtgatcg ctgcaccacc acagggccga gttctcgaag
     3961 gcggcggcac cgaagaggag cacgcccagg cgcagcggcc aggcggcccg gaaggaccgg
     4021 tggctgaaca gccggtggta gccgatggtc accgacaggc ccacgagggt gtacatcagc
     4081 gccagcatgc ccacctcgct ccagcgcaac ccctgcaggg ccagcttgag cggcaccagg
     4141 atcagcgcga gcgccagcgt tcccagcagg aagaaggtgt tcagcaggga acggcgcgcc
     4201 tgattggcca tgcaaccacc tgaggcgcga agatcgcgcc ttccagaacc aatataggct
     4261 ttcggacgac cagggcggat cagaccttcc gcagcaccag gcagccgtta gtgccgccga
     4321 agccgaagcc gttgttcatg gcgtactcgg cgtcgaaggt gcccgccacg ttgggtgtga
     4381 catccaggtc gcactcgggg tcctggtggt ccacgttgat ggtgggggga atcttcccgg
     4441 tcttcacggc catgacggcc acgatggtct ccagcccgcc cgcggcgccc aggaggtgcc
     4501 cgtgcatgga cttggagctg ctcaccttga tcgtcttcgc gtggtcgccg aagaccttct
     4561 ggatggcggt gcactccagc ttgtcgccca cgggcgtgct ggtgccgtgc atgttcacgt
     4621 agcccacctg ctccggcgcg atgtcggcat ccttgatggc cgcccgcatg acgcgctggc
     4681 cgccctcgcc ctcgggggcc ggggtggtga tgtggttggc gtcgccgctc atgccgtagc
     4741 cggcgacttc cgcgtagatc ttggcaccac gggccttcgc cagctcgtat tcctcgagaa
     4801 tgacgatgcc cgcgccctca cccatcacga agccgtcgcg gtccacgtcg aagggccgcg
     4861 aggcgcgctc gggctcgtcg ttgcgggtgc tgagggcgcg catggcggcg aagccgccca
     4921 cgcccagctg gttcaccacg gaatcgctgc cgccggccat catgcggtcc gcgtagccga
     4981 aggcgatgag gcgcgctgcg tcgccgatgg cgtgggcccc ggtggcgcag gcggtggcca
     5041 cggcgctgtt cggtccctgc aggccgtact tgatgctcgc ctggccgctg gccaggttca
     5101 cgatgaggct ggggatgaag aaggggctgg tgcggcgggg accgcggtag ccgttggcct
     5161 cgtcccagat ggtgctgagg ccgccgatgc cgctgccgat gtaggtgccg aacacctctc
     5221 gctcggcctt ggtgagctcg atctggtcga aacccgcgtc cacccaggcc tcgtgggccg
     5281 cgcccagggc gtactggatg aagatgtcca tcttcttctg ttccttgcgg tctatgtact
     5341 tgtcgggctc gaagcccttc acctcgccgc cgatgcggca cgggaacgcg ctgacgtcga
     5401 gcttggtgat cggaccg
//
LOCUS       DATGWW010000526         3596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_39127, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000526 DATGWW010000000
VERSION     DATGWW010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3596
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39127"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1108
                     /gene="gcvPA"
                     /locus_tag="VK150_07635"
     CDS             <1..1108
                     /gene="gcvPA"
                     /locus_tag="VK150_07635"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF001696.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HLP31217.1"
                     /translation="IDAMCSRQEWFTAYTPYQPEISQGTLQHIFEYQTLICDLTGLEV
                     TNASLYDGGTACVEAALMAVRVAKKRNTVLVSRGLHPLYREVLKTNFAPHDGLKLVEV
                     GLKDGVTDLSDLQAKLNGDVAAVLVGYPNFLGAVEDLTALAGPIHAAGALLVSVTQEA
                     FAFGWFESPGKAGADMACGEAMSLGNKPNYGGPFLGFLAVKDAHKREIPGRVVGQTKD
                     LNGETGYVLTLTAREQHIRRDKATSNICSNQGLVALRANIFMQLAGPEGLRGLAEQNA
                     AKAQYLRQRLLELPDMQPVDDQPFFNEFVLRYTGDYAALQEACLKESLLPGLDLGRFY
                     PEYQGCILWCATELHTRQMIESLVEILARVPATV"
     gene            1312..2841
                     /gene="gcvPB"
                     /locus_tag="VK150_07640"
     CDS             1312..2841
                     /gene="gcvPB"
                     /locus_tag="VK150_07640"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF003346.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HLP31218.1"
                     /translation="MFLRQREPLSFERSVPGKRGMDLPKLDVPAAKDTRPAHLKRSGF
                     DALPELSEVEVIRHFTRLSKWNYGVDDGIYPLGSCTMKHNPRLNEKVASLPGFTDSHP
                     MAPDAFVQGNLQMLYTLQEWLKEITGLPGVTLQPSAGAAGELTGVMLIRAYHVSRGAK
                     RRVILIPDSGHGTNPATAAMAGYEVVELPSRPDGTISFEDVTDPVNGKVRKGLKTLVA
                     ELGTEIAGAMITNPNTVGVFEYRFKEISDLLHSVDALVYMDGANMNALVGVARPGDFG
                     VDVMHLNLHKTMSTPHGGGGPGAGPVCCVEKLVPFLPVPVVVRDTVKVGEGEVPRHSY
                     RMEWDRPQSIGKVHTFIGNFGILVRALTYCLSHGSDGLKDATLRAIVNANYIRARLKG
                     AYALHIDSPSLHEVVFSDTLQAKHDVHTLDIAKRLIDHGYHPPTIYFPLIVPGALMIE
                     PTESEGKDELDAFCDTLLQIAKEVEENPDALHQAPTLAPLRRMDETTAARKPILRWTK
                     A"
     gene            3094..>3596
                     /locus_tag="VK150_07645"
     CDS             3094..>3596
                     /locus_tag="VK150_07645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31219.1"
                     /translation="MPDARAGLSPRALAWYAVVVLALGWGLEAIAVFRVGLTSPAVRP
                     WFMAGMWSPTVVAIGFLLFYPPARQGVRLGPGDLRYFPLGLFASAVLAFGTVALALGL
                     GWGRPGWFEFHASGVTVTGGPWKLGLGPQSWFRFVGNVLVTGAWFAALNCAVAVGEEF
                     AWRGFLQG"
BASE COUNT          577 a         1295 c         1164 g          560 t
ORIGIN      
        1 catcgacgcg atgtgcagcc gccaggaatg gttcacggcc tacacgccct atcagcccga
       61 gatcagccag ggcacgctgc agcacatctt cgaataccag accctcatct gcgacctgac
      121 gggccttgag gtcaccaacg ccagcctcta cgacggcggc accgcctgcg tggaagcggc
      181 gctcatggcc gtgcgcgtgg ccaagaagcg caacaccgtg ctggtgagcc gcgggctcca
      241 cccgctctac cgcgaggtgc tgaagaccaa cttcgcgccc catgacggcc tgaagctggt
      301 ggaagtgggc ctgaaggacg gtgtcaccga cctgtccgac ctgcaggcca agctgaacgg
      361 cgacgtggcc gcggtgctgg tgggctatcc gaacttcctg ggcgccgtgg aggacctcac
      421 ggccctggcc ggccccatcc acgccgccgg tgccctgctg gtgagcgtca cgcaggaggc
      481 cttcgccttc ggctggttcg agtcccccgg caaggccggc gccgacatgg cctgcggcga
      541 ggccatgagt ctgggcaaca agcccaacta cggcggcccc ttcctgggtt tcctcgccgt
      601 gaaggacgcc cacaagcgcg agatccctgg ccgcgtggtg ggccagacaa aggatctgaa
      661 cggcgagacc ggctacgtgc tgaccctcac cgcccgcgag cagcacatcc gccgcgacaa
      721 ggccaccagc aacatctgct cgaaccaggg gctcgtggcc ttgcgcgcca atatcttcat
      781 gcagctggcg ggccccgagg gcctgcgcgg cctggccgag cagaacgcgg ccaaggccca
      841 gtacctgcgt cagcgcctgc tggagttgcc cgacatgcag cccgtggatg accagccctt
      901 cttcaacgag ttcgtgctgc gctacaccgg cgactacgcc gcgctgcagg aggcctgcct
      961 gaaggagagc ctgctgccgg gcctcgacct gggccgcttc taccccgaat accagggctg
     1021 catcctctgg tgcgccacgg aacttcacac ccgccagatg atcgagagcc tcgtcgagat
     1081 cctggcccgc gtcccggcca cggtttagcg tcccgctaca cggcatgact tcaccacgga
     1141 ggcgcggagt gcacggagct gtcacggaga ggatcacgga gggcgtcatg gctgcgccct
     1201 tgtgtctctg tgcccgctcc gcggttttcc tctgtggcct ccgtgcctcc gtggtggatc
     1261 cgtttgaccc gtccatgacc ctcgatctgt cgcatcctct caggtgaccc catgttcctt
     1321 cgtcagcgcg aacccctctc cttcgaacgc tccgtccccg gcaagcgggg catggacctg
     1381 ccgaaactcg acgtgcccgc cgccaaggac acccggcccg cccatctgaa gcgcagcggg
     1441 ttcgacgccc tgcccgagct cagcgaggtg gaggtcatcc gccacttcac ccggctctcc
     1501 aagtggaact acggcgtgga cgacggcatc tacccgctgg gctcctgcac catgaagcac
     1561 aacccccgcc tgaacgagaa ggtggcgagc ctgcccggct tcacggacag ccatcccatg
     1621 gccccggacg ccttcgtcca gggcaacctg cagatgctct acaccctgca ggaatggctg
     1681 aaggagatca ccggcctgcc cggcgtgacc ctgcagccca gcgccggcgc cgccggcgag
     1741 ctgacgggcg tcatgctcat ccgcgcctac cacgtgtccc ggggcgccaa gcgccgcgtg
     1801 atcctcatcc ccgacagcgg ccacggcacc aaccccgcga cggccgccat ggcgggctat
     1861 gaggtggtgg agctgccttc gcggcccgat ggcaccatca gcttcgagga cgtcaccgat
     1921 cccgtgaacg gcaaggtccg caagggcctg aagaccctgg tcgccgagct gggcaccgag
     1981 atcgccggtg ccatgatcac caacccgaac accgtgggcg tcttcgagta ccgcttcaag
     2041 gagatcagcg acctgctgca cagcgtggac gccctggtct acatggacgg cgcgaacatg
     2101 aacgccctgg tgggcgtggc ccgccccggc gacttcggcg tggacgtcat gcacctgaac
     2161 ctgcacaaga ccatgtccac gccccacggc ggcggcggtc ccggcgccgg ccccgtctgc
     2221 tgcgtggaga agctggtgcc cttcctgcct gtgcccgtcg tcgtgcgcga caccgtgaag
     2281 gtgggcgagg gggaggtgcc caggcacagc taccgcatgg aatgggaccg cccccagagc
     2341 atcggcaagg tccacacctt catcggcaac ttcgggatcc tcgtgcgggc gctgacctac
     2401 tgcctgagcc atggctccga cggcctcaag gacgccaccc tgcgcgccat cgtgaacgcc
     2461 aactacatcc gcgcccggct caaaggcgcc tacgccctgc acatcgactc ccccagcctg
     2521 cacgaggtgg tcttctccga caccctccag gccaagcatg atgtccacac cctggacatc
     2581 gccaagcggc tcatcgacca cggctaccac ccgcccacga tctacttccc cctgatcgtg
     2641 cccggcgcgc tgatgatcga gcccacggag agcgagggca aggacgagct ggacgccttc
     2701 tgcgacaccc tgctgcagat cgcgaaggag gtcgaggaga acccggacgc cctccaccag
     2761 gccccgaccc tcgcccccct gcgccgcatg gacgagacca ccgcggcccg caagccgatc
     2821 ctgcggtgga cgaaggcctg aagccagacg cagccggtga aggcccccgg acccgggggc
     2881 cttcccgtat ccagtcaacc gggtgggaca ccacgggcgg tccgcccggg aaccccgggg
     2941 gactgcgggc atcgggtcgt ccctaaacct cggcggaaga accgcgaagc ctggcggtca
     3001 atgggaatca tctgcggtgc ctgccgcgat ggaggaggtg cccggtgtcc acagccttgg
     3061 cggaagtccg cgtcgccgat gtcggtcatt tccatgcctg atgcgagggc gggcctcagc
     3121 ccccgggccc tggcctggta tgccgtggtg gtgctggccc tcgggtgggg cctcgaggcg
     3181 attgcggtct tccgggtggg attgaccagc cccgccgtgc gcccctggtt catggccggc
     3241 atgtggtcac ccaccgtggt ggcgatagga ttcctgctct tctatccgcc ggcccgccag
     3301 ggcgtgcggc tgggacccgg ggacctgcgg tactttcccc tgggactctt cgcctcggcg
     3361 gtcctcgcct tcggcacggt ggccctggcg ctgggcctgg gatggggaag gcccggctgg
     3421 ttcgaattcc atgccagcgg cgtcaccgtg acgggcgggc catggaagct cggattgggc
     3481 ccccagtcct ggttccggtt cgtgggtaac gtcctggtga ccggggcctg gttcgcggcg
     3541 ctgaactgcg cggtggcggt gggcgaggag ttcgcctggc gcggctttct gcaggg
//
LOCUS       DATGWW010000527         2113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_39153, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000527 DATGWW010000000
VERSION     DATGWW010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39153"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..307)
                     /locus_tag="VK150_07650"
     CDS             complement(<1..307)
                     /locus_tag="VK150_07650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31220.1"
                     /translation="MLRPRRFLVWLRKVHAWVGLAGAALGLLFGLTGFLLNHRAVMEI
                     PGGRIETDKVQLQLSEAPASPERLAQELAAQLGFQPGQARWQVQPPRPVQFGGKPVTA
                     "
     gene            complement(311..>2113)
                     /locus_tag="VK150_07655"
     CDS             complement(311..>2113)
                     /locus_tag="VK150_07655"
                     /inference="COORDINATES: protein motif:HMM:TIGR01783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HLP31221.1"
                     /translation="DQVSIRGFTAIGDQFVDGIRDDGLYFRDLSNVERVEVLKGPASV
                     LYGRGSSGGMINRITKQPDGQLVREVELTAGTLGQRRGSFDLGGAAAGANYRLTGALE
                     DSDGFRNQSFLERQALAPSFSWRFSKDTRLTVQFDYLHDTRVTDFGIPGLLSTGRPVD
                     VPRETYYGSSDARSDDYSRSRVYGTTVTFEHRFSPSLSLRNATRAYDFDLDRHNTLVG
                     SVNEAAGTVSLTHGDLRRQEEGLFDQLELVQRLATGSVHHQLLYGVELGLQRKGARNF
                     SFANAVTVSLYDPVLKPLPAFNYAVPAGNSLSHQKSLSGYVQDLVELTPQWKALLGVR
                     WDRFDQSTQDFKAFKTLERVDTAWSPRAGLVFQPTDIQSYYLSFSRSFQPSAELLALA
                     ANNVSVDPERTRNWELGAKYDLFAGKGAATVALFNLERTGIKSVDPANPTVLLPVGTQ
                     RTNGLEASLGGEIADGWRVRVGYAHLDGRITGSTPGTKVSGVAIEGHRPSLTPVDSGN
                     LWITWDITEGWGAGLGINASGDRFASNSNLVRLGSYTTVDGAVYYRARRWDLALNLKN
                     LTNQKYIAAGHGASDLLLVPGAPVSADLSLRFRL"
BASE COUNT          313 a          661 c          805 g          334 t
ORIGIN      
        1 ccgccgtgac gggcttgccc ccgaactgga cgggccgggg gggctgcacc tgccaccggg
       61 cctgccccgg ctggaagccc agctgggcgg ccagctcctg ggccaggcgt tccggcgatg
      121 ccggtgcctc cgacagctgc agctggacct tgtcggtctc gatgcggccg ccggggattt
      181 ccatcacggc ccgatggttc aggaggaagc cggtgaggcc gaacagcagg cccagggccg
      241 cgcccgcaag gcccacccag gcgtggacct tgcgaagcca gacgaggaag cggcgtgggc
      301 gcagcatcgc ctagagacgg aagcggaggc tgaggtcggc gctcaccgga gctcccggca
      361 cgagcagcag gtcgctggct ccgtggcccg cggcgatgta cttctggttg gtcaggttct
      421 tcaggttgag cgcgagatcc cagcgcctgg cgcggtagta gaccgccccg tccacggtgg
      481 tgtacgaccc gaggcgcacc aggttgctgt tggaggcgaa gcgatcgccg gaggcgttga
      541 tgccgaggcc cgcgccccag ccttcggtga tgtcccaggt gatccacagg ttgccgctgt
      601 ccacgggggt gaggctcggg cggtggcctt cgatggccac accgcttacc ttggtgccgg
      661 gggtcgagcc cgtgatgcgg ccgtcgagat gggcatagcc cacacggacg cgccagccat
      721 cggcgatctc gccgccaagg ctcgcttcca ggccattggt gcgctgcgtg cccacgggca
      781 gcagcacggt ggggttcgcg ggatccacgc tcttgatgcc cgtccgctcc aggttgaaga
      841 gcgccacggt ggccgcgccc ttgccggcga agagatcgta cttggcgccc agctcccagt
      901 tgcgggtccg ctccgggtcc acactcacgt tgttcgccgc gagggccagc agctcggccg
      961 agggttggaa gctgcggctg aaggacaggt agtaggactg aatgtcggtg ggctggaaga
     1021 ccaggcccgc gcgagggctc caggccgtgt cgacgcgttc gagggtcttg aaggccttga
     1081 agtcctgggt ggactggtcg aagcgatccc agcgcacacc gaggagcgcc ttccactggg
     1141 gcgtgagctc cacgagatcc tggacgtagc cgctgaggct cttctggtgg ctcaggctgt
     1201 tcccggcggg caccgcgtag ttgaaggcgg gcaggggctt gaggacgggg tcgtagaggg
     1261 agacggtgac cgcattcgcg aaggagaaat tgcgggcgcc cttgcgctgc aggcccagct
     1321 ccacgccgta cagcagctgg tggtggaccg atccggtggc gaggcgttgc accagctcca
     1381 gctggtcgaa gagaccctcc tcctggcggc ggaggtcgcc gtgggtgagg gacacggtgc
     1441 cggcggcctc gttcacgctg cccaccaggg tgttgtggcg gtccaggtcg aagtcgtagg
     1501 cccgcgtggc gttgcggagg ctgaggctgg ggctgaaccg gtgttcgaag gtgacggtgg
     1561 tgccgtagac ccgcgagcgg ctgtagtcat cgctccgggc gtcggaggag ccgtagtagg
     1621 tctcgcgcgg cacgtccacc gggcggccgg tgctgagcag gcccggaatg ccgaaatccg
     1681 tgacccgggt gtcatgcagg tagtcgaact gcaccgtgag gcgggtgtcc ttcgagaagc
     1741 gccagctgaa ggagggcgcc agggcctggc gttccaggaa ggactggttg cggaagccgt
     1801 ccgagtcctc cagggcgccg gtcagccggt agttggcgcc ggcggccgcg ccgcccaggt
     1861 cgaagctgcc gcggcgctgg cccagggtgc cggccgtaag ctcgacctcg cggacgagct
     1921 ggccgtcggg ctgcttggtg atgcggttga tcatgccgcc ggaggacccg cggccgtaga
     1981 gcaccgaggc aggccccttg aggacttcga cgcgctccac gttgctgagg tcgcggaagt
     2041 acagtccgtc atcacggatg ccgtccacga actggtcgcc gatggcggtg aagccgcgga
     2101 tgctcacctg gtc
//
LOCUS       DATGWW010000528         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_39439, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000528 DATGWW010000000
VERSION     DATGWW010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39439"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1367
                     /gene="hutU"
                     /locus_tag="VK150_07660"
     CDS             <1..1367
                     /gene="hutU"
                     /locus_tag="VK150_07660"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR01228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016153 - urocanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HLP31222.1"
                     /translation="IANSNLVGNWATWDVFRDLERQGLMMYGQMTAGSWIYIGTQGIL
                     QGTYETFAEAARQHFNGTLAGTWTLTAGLGGMGGAQPLAVTMNGGVCLAIEVDRTRIQ
                     KRLDTRYLDEWTDNLDTALALAQQYVDAHEPRSIGLLGNAAELLPEILKRGFIPQLVT
                     DQTSAHDEYNGYIPAGLSIEQAAVMRKAEPEAYVQRALTSMRTHVEAMIEFQRLGAVT
                     FDYGNNIRAQAQRAGCENAFAFPGFVPAFIRPLFCKGIGPFRWAALSGDPEDIAVTDA
                     AMMELFPENEGMIRWLKAAQEKIAFQGLPARICWIGAGQRHLAGLKFNELVRTGKVKA
                     PIVIGRDHLDSGSVASPNRETEAMKDGSDAVSDWPLLNALTAASGGASWVSFHHGGGV
                     GMGYSQHSGVVIVADGTERAERCITRVLWNDPAMGVFRHADAGYESAREHAEQIGLHI
                     PMKG"
BASE COUNT          276 a          596 c          522 g          240 t
ORIGIN      
        1 tgatcgcgaa ctcgaacctg gtgggcaact gggcgacctg ggacgtgttc cgggacctgg
       61 agcgccaggg cctgatgatg tacggccaga tgacggccgg gtcctggatc tacatcggca
      121 cgcaggggat cctgcagggc acctacgaga ccttcgccga ggcggcccgc cagcacttca
      181 acggcaccct ggccggcacc tggacgctca ccgcgggcct cggcggcatg ggcggcgccc
      241 agcccctggc cgtcacgatg aacggcggtg tctgcctggc catcgaggtg gaccgcaccc
      301 gcatccagaa gcgcctggac acccgctacc tggacgagtg gaccgacaac ctggacacgg
      361 cgctggccct ggcgcagcag tacgtggatg cccacgagcc ccgcagcatc ggcctgctgg
      421 gcaacgccgc ggagctgctg cccgagatcc tcaagcgggg cttcatcccc cagctggtca
      481 cggaccagac ctccgcccac gacgagtaca acggctacat ccccgcggga ctgtcgatcg
      541 aacaggccgc cgtgatgcgc aaggccgagc ccgaggccta cgtgcagcgg gccctaacct
      601 ccatgcgcac ccatgtggaa gccatgatcg agtttcagcg ccttggggcg gtcaccttcg
      661 actatggcaa caacatccgc gcccaggccc agcgggccgg ttgcgaaaac gccttcgcct
      721 tccccggctt cgtgccggcc ttcatccggc ccctcttctg caagggcatc gggcccttcc
      781 gctgggccgc gctctcgggc gatccggagg acatcgccgt caccgacgcc gccatgatgg
      841 agcttttccc cgagaacgaa ggcatgatcc ggtggctcaa ggccgcccag gagaagatcg
      901 ccttccaggg cctgcccgcc cgcatctgct ggatcggcgc cggacagcgc cacctcgccg
      961 gcctgaagtt caatgagctg gtgcgcacgg gcaaggtcaa ggcgcccatc gtcatcggcc
     1021 gcgaccacct ggacagcggc agcgtggcca gccccaaccg cgagaccgag gccatgaagg
     1081 acggctccga tgccgtcagc gactggccgc tgctcaacgc cctgacggcg gcctccggtg
     1141 gcgcgtcctg ggtgagcttc caccacggcg gcggcgtggg catgggctac agccagcaca
     1201 gcggcgtggt catcgtggcc gatggcaccg agcgggccga gcgctgcatc acccgggtgc
     1261 tctggaacga tcccgccatg ggcgtcttcc gccatgccga cgccgggtac gagtccgccc
     1321 gcgagcacgc cgaacagatc ggcctgcaca tcccgatgaa gggttgaact gaccatttgc
     1381 cactgatgaa cacggatgga ctcagataga gccccgggga ccacatccgt gttcatccgt
     1441 ggctgtttcc tggaggttga tcatgtcccg cccctgcccc tgcacctcca agaagcccta
     1501 cgaccgctgc tgcggcccct tccactcagg ggcggccgcg ccggaaaccg cggagctgct
     1561 catgcgctcc cggttctccg cctacgccct gggcaaggtg gactacctca ttgccacccg
     1621 gcccgaggcc aagc
//
LOCUS       DATGWW010000529         3159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_39472, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000529 DATGWW010000000
VERSION     DATGWW010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3159
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39472"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..856
                     /gene="ruvB"
                     /locus_tag="VK150_07665"
     CDS             <1..856
                     /gene="ruvB"
                     /locus_tag="VK150_07665"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF000868.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HLP31223.1"
                     /translation="DYVLLFGPPGLGKTTLAHVLANEMGAPCKVIQAPALEKKGDLAA
                     ILTNLDEGEFLFIDEIHRLPPAIEEMLYAAMEDRKLDILIGQGPSAQTLKVDLRPFTL
                     VGATTRAGLISKPLHDRFGMVHRLEFYTRADLSIIAARSADLLGIHLAAEGAEAISRR
                     SRGTPRICNRLLRRCRDYAEVKGDGTITIESAEACLKLHEVDDLGLDGLDRAYLQAIC
                     HKHRGGPVGLRTLAAALGEDEGALEDLVEPYLLQVGFLDRTPQGRKATDAAYAYLGLK
                     SDPGPLFR"
     gene            complement(869..1330)
                     /locus_tag="VK150_07670"
     CDS             complement(869..1330)
                     /locus_tag="VK150_07670"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HLP31224.1"
                     /translation="MAVFGSSKSKPEAAPAIHSLLGKDVTFTGEIHTGARSLRIEGTV
                     DGIIHSTGEVSIAPGGLVKGTVFAKHLVVTGRAEGTMKITDCLEIHGTGYVEGDVEVG
                     SLVVDEGGTLQGVCIRKDQTKNLDANNGPAKGGTLPIPGKVVDPKKLDPKH"
     gene            complement(1341..2255)
                     /locus_tag="VK150_07675"
     CDS             complement(1341..2255)
                     /locus_tag="VK150_07675"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HLP31225.1"
                     /translation="MRWLTVMVVFSHRTFRWSLTRRLMLWVVGGVLGFSALAMIGSGY
                     GFWATKKIMSFGRLQKETQEQQEQLRSSLDQAQALEAEVAMLRQQHTELLKLLDPKAQ
                     VSSPLPTPPGQTQSAPLPPGTQERLSRLRQDLDYTSKQAAIVRARMEPVIRAWSHTPS
                     IPPTAGYLSSGYGVRVSPFSRSNEAGDGLLGYHSGIDISNVLDTPIQATADGEVIEAG
                     WMDRYGWGVRIRHTNEQETLYAHLNHVDVKAGQKVSRGEILGTMGRSGNATGVHLHYE
                     VRLGGKAVNPQPYLRLQRQWLRAIGKPS"
     gene            complement(2373..>3159)
                     /locus_tag="VK150_07680"
     CDS             complement(2373..>3159)
                     /locus_tag="VK150_07680"
                     /inference="COORDINATES: protein motif:HMM:TIGR01475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UbiA-like polyprenyltransferase"
                     /protein_id="HLP31226.1"
                     /translation="AAQGLPPLRTSLWILAAMVGARTAAMTFNRLVDVDVDAENPRTA
                     SRALPAGRVSRAGAVVLLGTGIVLFGVAAGALGPLTWALSPLALAVILGYSLCKRFTA
                     WAHVVLGLSLSGAPLGAWIAVAGRIEAPALWLSAGVLAWTAGFDILYSLQDEAFDRKR
                     GLHSIPSRIGTGGALLLSRVFHLAAVLCWGMFNHQMGVHLLPWAAWILVVAMLAREQW
                     LMRGGDLSRIDQAFFTLNSLIGLVFFMGHALEWWLSRSLLAPL"
BASE COUNT          522 a         1058 c         1110 g          469 t
ORIGIN      
        1 ggactacgtg ctgctcttcg gaccgccggg cctggggaag accaccctgg cccacgtcct
       61 cgccaacgag atgggcgcac cctgcaaagt catccaggcc ccggccctgg agaagaaggg
      121 cgacctcgcg gccatcctca ccaacctgga cgaaggcgag ttcctgttca tcgatgagat
      181 ccaccgtctc ccccccgcca tcgaggagat gctctacgcg gccatggagg accggaagct
      241 ggacatcctc atcggccagg gacccagcgc ccagaccctc aaggtggacc tccgcccctt
      301 caccctggtg ggggccacca cgcgggccgg gctcatctcc aagcccctcc acgaccgttt
      361 cggcatggtc caccgcctgg agttctatac ccgggccgac ctgtccatca tcgcggcgcg
      421 ttcggcggac ctgctgggca tccaccttgc cgcggagggg gccgaggcca tctcccggcg
      481 cagccgcgga accccccgca tctgcaaccg cctgctccgc cgctgccgcg actacgccga
      541 ggtgaagggg gatggcacca tcaccatcga atcggccgag gcctgcctga agctccacga
      601 ggtggacgac cttggcctcg acggcctgga ccgggcctac ctgcaggcca tctgccacaa
      661 gcaccgcggc ggcccggtgg gcctgcgaac gctggccgcg gccctgggcg aggacgaagg
      721 cgccctggag gacctggtgg agccctacct cctgcaggtg ggattcctgg accgcacccc
      781 ccagggccgg aaggccacgg acgcggccta cgcctacctg gggctcaagt cggacccggg
      841 gcccctcttc cgctgaaggc gcgaaggctc agtgcttcgg atccagcttt ttggggtcga
      901 ccaccttgcc ggggatgggg agggtgccgc ccttggcggg gccattgttg gcatccaggt
      961 tcttcgtctg gtccttgcgg atgcagacgc cctggagcgt gccgccctcg tccaccacca
     1021 gcgagcccac ctcgacgtcg ccttccacat agcccgtgcc gtggatctcc aggcagtcgg
     1081 tgatcttcat ggtgccctcg gcccggcccg tgaccaccag gtgcttggcg aagacggtgc
     1141 ccttcaccag gccgccgggg gcgatggaga cctcaccggt ggagtggatg atgccgtcca
     1201 cggtgccttc gatccgcagg ctgcgggccc cggtgtggat ctccccggtg aacgtcacat
     1261 ccttccccag cagggaatgg atggctgggg cggcttcagg cttggatttg ctgctgccaa
     1321 agacggccat ggtgactcct tcaggacggc ttgccgatgg cccggagcca ttggcgctgg
     1381 agccggaggt agggctgggg attgacggcc ttgccgccga ggcggacctc gtagtggagg
     1441 tggacgcccg tggcgttgcc cgaacgcccc atggtcccca ggatttctcc gcgggacact
     1501 ttctggccgg ctttcacatc gacatgattg aggtgcgcgt agagcgtctc ctgctcgttg
     1561 gtgtgacgga tccgcacgcc ccacccgtag cggtccatcc agcccgcttc gatcacctcg
     1621 ccatccgccg tggcctggat gggggtgtcg aggacgttgc tgatgtcgat gcccgagtgg
     1681 tacccgagca ggccgtcgcc ggcctcgttg gacctggaaa aggggctcac ccgcacgccg
     1741 tacccggaac tgaggtagcc ggcggtggga gggatggacg gggtgtggct ccaggcccgg
     1801 atgacgggct ccatgcgggc ccgcacgatg gcggcctgct tggaggtgta gtccaggtcc
     1861 tggcggaggc gggagaggcg ctcctgggtg cccggtggaa ggggtgcgga ttgggtttgt
     1921 cccggagggg tgggcagggg ggagctgacc tgggccttgg ggtcgagcag tttcagaagc
     1981 tcggtgtgct gctggcgcag catggccacc tcggcctcga gcgcctgggc ctggtccagg
     2041 gaggaccgga gctgttcctg ctgctcctgg gtttccttct gcagacggcc gaagctcatg
     2101 atcttcttcg tggcccagaa gccgtacccc gatccgatca tggccagcgc agagaagccg
     2161 aggacgcccc ccaccaccca gagcatgagc cggcgggtga gggaccaccg gaaggtccgg
     2221 tggctgaaca cgaccatgac ggtgagccat cgcacagaat cgggacggct ggaccggacg
     2281 gcgcgacggc gttcaggctg atgggtggac atgggccccc agcatacctg ggaaagggcg
     2341 agagggcgac acgccttctt acaaccaagg atctagagcg gggcgagcag ggaccgcgac
     2401 agccaccatt ccagcgcgtg tcccatgaaa aacacgaggc cgatcaagct gttcaacgtg
     2461 aagaaggcct ggtcgatccg ggacaggtcc ccgccccgca tgagccactg ctcccgggcc
     2521 agcatggcca ccaccaggat ccaggcggcc cagggcagaa ggtggactcc catctgatgg
     2581 ttgaacatgc cccagcagag caccgcagcc aggtggaaga cccgggacag gagcagcgcc
     2641 cctcccgtgc cgatccgcga tgggatggaa tggagaccgc gtttccggtc gaaggcttcg
     2701 tcttggagcg aatagaggat gtcgaagccg gccgtccagg ccaggacccc ggcggacagc
     2761 cagagggccg gggcctcgat ccgtccggcc acggcgatcc atgcccccag gggcgcaccg
     2821 gagagggaaa ggcccagcac cacgtgggcc caggccgtga agcgcttgca gagggagtag
     2881 cccaggatga ccgccagggc gaggggggag agggcccagg tgaggggccc cagggcgccg
     2941 gcggccacgc cgaacagcac gatgcccgtg cccagaagaa ccacggcccc ggcccgggac
     3001 acgcgccccg ccgggagagc gcggctggcg gtgcggggat tctccgcgtc gacatccacg
     3061 tccaccaggc ggttgaaggt catggccgcg gtgcgcgccc ccaccatggc cgccaggatc
     3121 cacagcgagg tgcgcagggg tggaaggccc tgggcggcg
//
LOCUS       DATGWW010000530         1676 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_199569, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000530 DATGWW010000000
VERSION     DATGWW010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199569"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..282)
                     /locus_tag="VK150_07685"
     CDS             complement(<1..282)
                     /locus_tag="VK150_07685"
                     /inference="COORDINATES: protein motif:HMM:NF014629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HLP31227.1"
                     /translation="MYPVTLLAFGRLRLEPCRELERHYLAMLRPYARMDVVELAEGKG
                     DPARQLKEEAERLRPRLSAVKCPVLLTPEGKLRDSEGFAQWLGTRMDRGE"
     gene            367..978
                     /locus_tag="VK150_07690"
     CDS             367..978
                     /locus_tag="VK150_07690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31228.1"
                     /translation="MRRALMLPLASLLLVPAFVGCGGDEIPTTAPSAAKEPADILYHL
                     QYLAVRKDYKHAALIAPITPDVVYPSAMHFHRQAKELGITLTPEEIKGLGIEHLAAKL
                     DELPGGPTDDYPVKDARLAFNAGIYRLTKGLTAKSWGRMRHMGIVDNTAARQFGSQTI
                     VKDMALGFDGTKVMTISCLKKPDGTYGISYLRYEVSLKGLKQD"
     gene            1136..>1676
                     /locus_tag="VK150_07695"
     CDS             1136..>1676
                     /locus_tag="VK150_07695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31229.1"
                     /translation="MSKKNIVHVVGTGTIGEPLVGLLTEFQKELGIDEVTFHKNSVSE
                     RPKVKALMKRGAKLAVDADKLEGFRAWGIEPAMLHEQAMDEASVVIDCSPKGLDMKET
                     LYKKYEHNTKGFIAQGSEFGFGTMYARGINDAVLRASGQYVQVVSCNTHNLSCIIDTL
                     ALGEGDDNLIEGTFVCMRRA"
BASE COUNT          310 a          607 c          493 g          266 t
ORIGIN      
        1 ctcgccccgg tccatgcgcg tccccagcca ctgcgcgaag ccttcgctgt cgcggagttt
       61 tccttccggc gtcagcagca ccggacattt cacggccgat aggcgggggc gcagtcgctc
      121 ggcctcctcc ttcagctgcc gggccggatc ccccttccct tccgccagct ccaccacgtc
      181 catccgcgcg tagggccgca gcatcgcgag gtagtgccgt tccagctccc ggcagggttc
      241 caggcgcagg cggccgaagg cgagcagggt gacgggatac atgatcctat tgtgatgaat
      301 ttcccttggc agcgcagcgg gaaggctgca ccatccttac atccagaccc taccggaggt
      361 ttcgacatgc gccgtgccct gatgctgccc ctcgccagcc tgctcctcgt ccccgccttc
      421 gtcggctgcg gcggcgacga gatccccacc acggcgccct ccgccgcgaa ggagcccgcc
      481 gacatcctct accacctgca gtacctggcc gtgcgcaagg actacaagca cgccgccctc
      541 atcgccccca tcacgcccga cgtggtctac ccctccgcca tgcacttcca ccggcaggcc
      601 aaggaactgg gcatcacgct cacccccgag gagatcaagg gcctgggcat cgagcacctc
      661 gccgccaagc tcgacgagct gcccggcggc cccaccgacg actacccggt gaaggacgcc
      721 cgcctggcct tcaacgccgg tatctaccgc ctgaccaagg gactcaccgc caagtcctgg
      781 ggccgcatgc ggcacatggg catcgtggac aacaccgccg cccggcagtt cggttcacag
      841 accatcgtga aggacatggc gctcgggttc gacggcacca aggtgatgac catcagctgc
      901 ctcaagaagc ccgatggcac ctatggcatc tcctacctgc gctacgaggt ctccctcaag
      961 ggcctgaagc aggactagcc gttacatagg gcatctccca aggccgcgcg gtctccgcgc
     1021 ggcctatttc tgtactgcgg ttcattcgcg attgcgggtg gcttttccgt ctgccgcctg
     1081 ggaaaatcaa tggttgggcc ggggggcgtc ccgaaacacc ggccgcggag gatccatgtc
     1141 caagaagaac atcgtccatg ttgtcggcac aggcaccatc ggcgaacccc tggtgggcct
     1201 gctcaccgag ttccagaagg aactcggcat cgacgaggtc accttccaca agaacagcgt
     1261 cagtgagcgg cccaaggtga aggcgctcat gaagcgcggc gccaagctgg cggtggatgc
     1321 cgacaagctc gagggcttcc gcgcctgggg catcgagccc gccatgctgc acgagcaggc
     1381 catggacgag gccagcgtcg tcatcgactg cagtcccaag gggctcgaca tgaaggagac
     1441 gctctacaag aagtacgagc acaacaccaa gggcttcatc gcccagggct ccgagttcgg
     1501 cttcggcacg atgtacgccc gcggcatcaa cgacgcagtg ctccgcgcca gcggccagta
     1561 cgtgcaggtc gtcagctgca acacccacaa cctctcctgc atcatcgaca ccctggccct
     1621 gggcgagggc gacgacaacc tcatcgaagg caccttcgtc tgcatgcgcc gcgcca
//
LOCUS       DATGWW010000531         4001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_449079, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000531 DATGWW010000000
VERSION     DATGWW010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4001
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_449079"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..990)
                     /locus_tag="VK150_07700"
     CDS             complement(<1..990)
                     /locus_tag="VK150_07700"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLP31230.1"
                     /translation="MAGAYATFTHITDYMGFEGLLTDEERMIRESARKFINAEVLPII
                     EQHAQAQTFPKHLIPMMGELGFYGPALPEEYGCMGVSNVAYGILMYELERGDSGLRSF
                     ASVQGSLVMWPIYAYGSEEQKKHWLPKLATGEKIGCFGLTEPDFGSNPGGMLTKAVKE
                     PGGKWRINGTKMWITNGTVADVAVVWAQTEDGIRGFLVEKGTPGFSAPEMKGKWSLRA
                     STTSELVLEDVIVDEKTSLLPNVKGLKGPLGCLTQARYGIAWGALGAADACYQCALDY
                     AKTRIQFDKPIASYQLQQEKLAWMVTELTKGQLLAYHYARLKEQGKLTPAQVSQ"
     gene            complement(1157..1756)
                     /locus_tag="VK150_07705"
     CDS             complement(1157..1756)
                     /locus_tag="VK150_07705"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF003296.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004797 - thymidine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HLP31231.1"
                     /translation="MFVHQRQGSLEVICGPMFSGKSEELIRRINRAVIAKQKVQVFKP
                     ALDDRYDVSAIASHSQRKHDAIPVKDTVELARHLDPEAQVVALDEVQFMDEGLIPIIE
                     DLASRGVRVIAGGLDQDSNGEPFGIMPILLAKAEYVTKLQAICMVCGALAGRTQRMVH
                     TGGQVLVGAAEAYEARCRHCHETPHATGQRLIEDPALGS"
     gene            complement(1766..2935)
                     /locus_tag="VK150_07710"
     CDS             complement(1766..2935)
                     /locus_tag="VK150_07710"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HLP31232.1"
                     /translation="MALEGSLRDFDLFSLFNMIKIQGKNGTLVLSQGQEFVKVFFENG
                     EIVGCDSNQVRMEDRLGTMLVRLGRLTGEELLGMVQIQRQTLKRMGTLLLESGKVMPS
                     DLQDALFNQATSILHRTFRWVEGDYRFDSMLPPDLDREHFVPIPVDTVLMEAARIQDE
                     WPEVERRLPSMDTPLGKSPQAQALHLDIDRDVAQLLDGKGHMQHGSSGLTHEQEMVLS
                     YFDHPQSIKDVIQVSRYEELDTCKAIADLIDSGLLEPISGEAPKVVRPWVTDGHPDLV
                     PKEWESSPLLWPAVAVAFLVPLALYVPHQRGSVNMGLASLQPVDVRVVPEGPTRLRQA
                     WALRMASPKDGGVMLAQDLGRPLDGMNPVPDLSKLPDPMGPAAPPSPVPPPATKK"
     gene            complement(2937..>4001)
                     /locus_tag="VK150_07715"
     CDS             complement(2937..>4001)
                     /locus_tag="VK150_07715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31233.1"
                     /translation="LGLLEPWAAREPQPSVLKLQMQPQVQPVPASALRFLPPSDQAFL
                     RGWSQLQNREWKAAEATFQELVGRHPDQAEVLNNLGVAKSQSGDAAGADKTFDLALIA
                     GPRMEVLLNQSILAFNRLDTALGASKRDEAQAASPEGYALLIALNDAQKDVRTYPMPL
                     PDTPERVRALMDAAGGPKEAGAFHLTQPAFLVALLLPILGLLAFLWRVRASVRMAHPT
                     QCVRCGEPFHTTDSPDVEVCPKCHHLFVLRDGLHAENRRKKLDEVADHQRATRWIHKS
                     LIVLLPGCDLAFLGETRVGLLEFLPFCLAVGMVLATGRSVRYPGEILADPTSTWLAVG
                     AGLVGLFYLRSWLKLILRRT"
BASE COUNT          637 a         1287 c         1401 g          676 t
ORIGIN      
        1 ctgggacacc tgggccgggg tgagcttgcc ctgttccttc aggcgggcgt agtggtaggc
       61 caggagctgg cccttggtca gctcggtgac catccaggcc agcttctcct gctgcagctg
      121 gtagctggcg atgggcttgt caaactggat gcgggtcttg gcgtagtcca gggcgcactg
      181 gtagcaggcg tccgcagcgc ccagcgcccc ccaggcgatg ccatagcggg cctgagtgag
      241 gcaacccagg gggcccttca gccccttcac gttgggcagc aggctggttt tctcgtccac
      301 gatgacgtcc tccagcacca gctcggaggt ggtcgaagcc cgcaggctcc acttgccctt
      361 catctccgga gcgctgaagc caggagtgcc cttctcgacg aggaatccgc ggatgccgtc
      421 ctcggtctgg gcccacacca cggccacgtc cgccacggtg ccgttggtga tccacatctt
      481 ggtgccgttg atgcgccact tgccgccggg ttccttcacg gccttggtga gcataccgcc
      541 ggggttcgag ccgaagtcgg gctcggtgag gccgaagcag ccgatcttct cgccggtggc
      601 cagcttgggc agccagtgct tcttctgctc ctcgctgccg taggcgtaga tgggccacat
      661 gacgaggctg ccctgcacgg aagcgaagga ccgcaggccc gagtcaccgc gctccagctc
      721 gtacatcagg atgccgtagg cgacgttgga gacgcccatg cagccgtatt cctcgggcag
      781 cgcggggccg taaaagccca gctcgcccat catggggatg aggtgcttgg ggaaggtctg
      841 agcctgggcg tgctgctcga tgatgggcag cacttcggcg ttgatgaact tgcgggccga
      901 ctcgcggatc atgcgctctt cgtcggtcag cagcccctcg aagcccatgt agtcggtgat
      961 gtgggtgaag gtggcgtagg cgccggccat ggaaacctcc tgatgtgccc tgaagcctcg
     1021 ggcagatgat ggaaacggcg ctgcagcagc gcgccggagg ccagtctacc tctgcgtcaa
     1081 aaccgggcca ggaacacatg cgcttccacc ctcccgatcc ctgtcatggg ggggaacggc
     1141 ttgacgaagt ggcaaatcag gaacccaggg cgggatcctc gatcagccgc tggcccgtgg
     1201 cgtggggcgt ctcatggcag tgcctgcagc gggcctcgta ggcctccgcg gcgcccacca
     1261 gcacctgccc gcccgtgtgc accatgcgct gggtgcgccc ggccagagcg ccgcacacca
     1321 tgcagatggc ctgcagcttg gtgacgtact cggccttggc cagcaggatg ggcatgatgc
     1381 cgaagggttc gccattggaa tcctggtcga ggccgccggc gatgacgcgc acgccgcggc
     1441 tggccagatc ctcgatgatc gggatgaggc cctcgtccat gaactgcact tcgtccaggg
     1501 ccaccacctg ggcctcggga tccagatgcc gcgccagctc caccgtgtct ttcacaggga
     1561 tggcgtcatg cttgcgctgg ctgtggctgg cgatggcgga gacatcgtag cggtcgtcca
     1621 gggccggctt gaagacctgc accttctgct tggcgatgac cgcccggttg atgcggcgga
     1681 tgagctcctc ggatttgccg gagaacatgg ggccgcagat cacctccagg gaaccctggc
     1741 gctggtggac gaacatcgga aatccttact tcttggtggc gggtggcgga accgggctgg
     1801 gcggggcggc gggccccatg ggatcgggaa gcttcgacag gtccggcacg gggttcatcc
     1861 cgtccagggg cctgccgagg tcctgcgcca gcatgacacc tccgtccttc ggcgaggcca
     1921 tccgcaacgc ccaggcctgc ctaagccgag tgggcccctc cggcacgacc cgcacatcca
     1981 cgggctggag gctggccagg cccatgttca cggaaccgcg ctggtggggc acgtagagcg
     2041 ccagaggcac caggaaggcc acggccacgg cgggccacag cagcgggctc gactcccatt
     2101 ccttggggac caggtccgga tgcccgtcgg tcacccaagg tcgcaccacc ttcggcgcct
     2161 cccctgagat gggctccagc aggccggaat cgatcaggtc ggcgatggcc ttgcaggtgt
     2221 ccagctcctc atagcggctg acctggatca cgtccttgat gctctggggg tggtcgaagt
     2281 acgagaggac catctcctgc tcgtgggtga ggcccgagga gccgtgctgc atgtgcccct
     2341 tgccgtccag cagctgggcc acgtcccggt cgatgtccag gtgcagggct tgggcctggg
     2401 gcgatttgcc caggggcgtg tccatgctgg gcaggcgccg ctccacctcg ggccactcgt
     2461 cctggatgcg ggcggcctcc atcagcaccg tgtccacggg aatcggcacg aagtgctccc
     2521 ggtcgaggtc cggcgggagc atcgagtcga accggtagtc cccctccacc cagcggaagg
     2581 tccggtggag gatggaggtg gcctggttga agagggcgtc ctgcaggtcg gagggcatga
     2641 ccttgccact ttccagcagc agcgtgccca ttcgcttgag ggtctggcgc tggatctgga
     2701 ccatgcccag cagctcttcg cccgtgaggc ggcccaggcg caccagcatg gtgccgaggc
     2761 ggtcctccat gcgcacctgg ttggaatcac aaccgacgat ctcgccgttc tcgaagaaga
     2821 ctttcacgaa ctcctggccc tgggatagga ccagggtgcc gttcttcccc tgaatcttga
     2881 tcatgttgaa cagggagaag aggtcgaagt cccggaggga tccttccagc gccatctcag
     2941 gtcctcctca aaatcagctt cagccaggaa cggaggtaga agaggcccac cagcccggcg
     3001 ccgaccgcga gccaggtgga ggtgggatcg gcgaggatct cgcccgggta ccgcacggag
     3061 cggcccgtgg cgagcaccat gcccaccgcc aggcagaagg gcaggaattc caacagcccc
     3121 acccgtgtct cgcccaggaa ggcgaggtcg cagccgggga gcagcacgat gagggactta
     3181 tggatccatc gcgtggcgcg ctggtggtcg gccacctcgt cgagcttctt ccgtcggttc
     3241 tcggcgtgga gcccgtccct cagcacgaag aggtggtggc acttcgggca cacctccaca
     3301 tccgggctgt ccgtggtgtg gaagggctcg ccgcagcgga cacactgggt cggatgggcc
     3361 atgcggacgc tggcccggac ccgccatagg aaggccagga gtccgaggat gggcagcagg
     3421 agtgccacca ggaaggcggg ctgggtgagg tggaaggcgc ctgcctcctt ggggccgccg
     3481 gcggcgtcca tgagggcccg cacccgctcc ggggtgtccg gcaggggcat ggggtaggtg
     3541 cgcacatcct tctgggcgtc gttcagggcg atgagcagcg cgtacccttc gggcgaggct
     3601 gcctgcgcct cgtcgcgctt cgaggcgccc agggcggtgt ccaggcggtt gaaggccagg
     3661 atgctctggt tgaggagcac ctccatcctc ggcccggcta tcagggcgag gtcgaaggtc
     3721 ttgtcggccc cggccgcatc gccggactgg gacttggcca cgccgaggtt gttgagcacc
     3781 tccgcctggt cgggatggcg gcccaccagt tcctggaacg tggcctcggc ggccttccac
     3841 tcacggttct gcagctggga ccaaccccgc aggaaagcct ggtccgaagg ggggaggaag
     3901 cgcagcgcgg aggctggcac gggctggacc tgcggctgca tctgaagctt gagcacactg
     3961 ggctgaggtt ctcgcgcggc ccagggctcc agcagaccca g
//
LOCUS       DATGWW010000532         3914 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_155049, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000532 DATGWW010000000
VERSION     DATGWW010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3914
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155049"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..364
                     /locus_tag="VK150_07720"
     CDS             <1..364
                     /locus_tag="VK150_07720"
                     /inference="COORDINATES: protein motif:HMM:NF015129.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31234.1"
                     /translation="GFFGFELPVADLPQAGDRIIPSFRPFSRFPAVERDLSLLVDLAC
                     SHEALHRAMAAALPAECLQDLRCVDVFRHKSLPEGRQAWLMRMRFQADRTLVGDEVDG
                     WVAAALAAAESLGARLRA"
     gene            385..621
                     /gene="zapB"
                     /locus_tag="VK150_07725"
     CDS             385..621
                     /gene="zapB"
                     /locus_tag="VK150_07725"
                     /inference="COORDINATES: protein motif:HMM:NF017786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA];
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapB"
                     /protein_id="HLP31235.1"
                     /translation="MDLLKQLETKMQALVQQRNQLKEELDALKAAGSEGDRELQALKA
                     KLDQALADKASLENDREAVKEQVAAILRALEALG"
     gene            618..977
                     /locus_tag="VK150_07730"
     CDS             618..977
                     /locus_tag="VK150_07730"
                     /inference="COORDINATES: protein motif:HMM:NF017016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HLP31236.1"
                     /translation="MRPPVPLPGTKPVTVTVQGRSLQVQTDRAESLDAAVRILEDTFQ
                     VMESQCQLRWGSVPKGLDTPSWYLLAALNLAHRVARLEQEANQHTHNLEQTLSKLLND
                     VPDEPSAPVPLLDEDGD"
     gene            1198..2838
                     /gene="rny"
                     /locus_tag="VK150_07735"
     CDS             1198..2838
                     /gene="rny"
                     /locus_tag="VK150_07735"
                     /inference="COORDINATES: protein motif:HMM:TIGR03319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HLP31237.1"
                     /translation="MNLIDWIFLCFTIVSGGLAFLFAMKAQKATVDSSQAQAKAEADI
                     KAERERMLEEARREAQRLRERGQQEADATRKESELKAKEQALQARQEAEKLLTERQNN
                     LEKQEQRIQSKEQGLQSKEEGLDKKLLQVDQKTKDLETLTEKRKAELEKLEAKQAEAR
                     LLVEEQAKKLEEIAGLTRDDAKKELISQLEYAAKMDAAKMVRRIEEEAQEDAQKKARW
                     TIGAAIQRVASDVVAEQAVSSVQLPSDDLKGRIIGREGRNIRAIEKATGCDLIVDDTP
                     ESIVVSSFDPIRREVARQAILKLLADGRIHPARIEEVVEKVKVDMDQHLKEIGEAACI
                     ELGFPDVHPKMHKLVGRLNYRTSYGQNVLEHTKEVARIAEYMAGEMGADARLARRAGL
                     FHDIGKAIDREVEGTHIEIGMQLMQRYGEKEEVIHAMSCHHGDFEPRTVEAMLITAAD
                     ALSAARPGARREMLETYVKRLEQLEGIANSYKGVQKSYAMQAGREIRILVDAGSVNDD
                     QAYWIAKDVSRRIESEMQYPGQIKVTVMRELRAVEVAR"
     gene            2926..>3914
                     /locus_tag="VK150_07740"
     CDS             2926..>3914
                     /locus_tag="VK150_07740"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HLP31238.1"
                     /translation="MTGPLSAAAEEALVRLFEQTSISFHVMDREGHILHANAKFRSHL
                     GLTEEDVRSVGFERLRHDLPPAEARTWFLQALDRAADQADMATWLRRDGVAVPVWVTV
                     AGRRTDEGERLFIWGRDRSEEQLVTDRLTESADLQRHLAEGIYALSLTRTQEEAYQVL
                     MGRASAILPGQHWFLGRVESEGGQRAIRMAAWIPDLEARLGPAIHGLNIPVEDSGFAR
                     EVYDLRRLCFVQDAYASPAMIHPPIAKAFGLRSLLGVPLVFEGRLTGVLFAASFQDEP
                     AMAPRESQFSVLQSLARIAALALERIQAEARLEKAAGLASSLAAAVRDLAAET"
BASE COUNT          725 a         1281 c         1337 g          571 t
ORIGIN      
        1 gggcttcttc gggttcgaac tgcccgtggc ggacttgccc caggcgggcg accggatcat
       61 cccgtccttc cggcccttca gccgcttccc ggccgtggaa cgcgacctct cgctcctggt
      121 ggacctggcc tgctcgcacg aggccctgca ccgggccatg gccgcggccc tgcccgcgga
      181 gtgcctgcag gaccttcgct gcgtggacgt cttccgccac aagagcctgc cggaaggacg
      241 gcaggcctgg ctcatgcgga tgcgcttcca ggcggaccgt acgctggtgg gtgatgaggt
      301 ggacggctgg gtcgccgccg ccctggccgc ggccgagtcg ctcggggcga ggctccgggc
      361 gtagaatggc cctttgaggc gaccatggac cttctgaaac agctcgaaac caagatgcag
      421 gccctggtcc agcagcgcaa ccagttgaaa gaagaactgg atgcgctgaa ggccgccggc
      481 tcggaagggg atcgcgagct gcaggccctg aaggcgaagc tggaccaggc cctcgccgac
      541 aaggcctccc tggagaacga ccgggaggcc gtgaaggagc aggtggcggc catcctccgg
      601 gccctggagg ccctgggatg aggccgccgg ttccgttgcc gggcaccaag ccggtcacgg
      661 tgacggtcca gggacgatcc ctccaggtgc agacggaccg ggcggagtcc cttgacgcgg
      721 cggtgcggat cctggaggac acctttcagg tcatggaatc ccaatgccag ctaagatggg
      781 ggagcgtccc gaagggcctc gacaccccgt cctggtacct cctggccgcc ctgaacctgg
      841 cgcaccgcgt ggcgcgtctg gaacaggaag ccaaccagca cacccacaac ctggaacaga
      901 ccctttcgaa gcttctgaat gatgttccgg acgaaccttc cgcccccgtg ccactccttg
      961 acgaggacgg agactgattt ccctgcgagg cccgtgatca tggccaagcg cttgttccgt
     1021 aagtcgactc gggagacctt ccccctgacc tgtgcgttcc gcgcgtcggc gcgccttagc
     1081 cagggattct ggtttccccc ctaccagcta gggaactcgg caagcctcca cgactgagcg
     1141 gggattttca attcgggtgc tggtggctct atggatcccc ttccttggag tcgccccatg
     1201 aatctgatcg attggatttt cctctgtttc accatcgtct ccggtggctt ggccttcctc
     1261 ttcgcgatga aggcgcagaa ggccaccgtg gacagttccc aggcccaggc gaaggccgag
     1321 gcggacatca aggctgaacg cgagcggatg ctggaggagg cccgccgcga agcccagcgg
     1381 ctgcgcgagc gcgggcagca ggaagccgat gccacgcgca aggaatccga actgaaggcc
     1441 aaggagcagg ccctccaggc ccgccaggag gcggagaagc tgctgaccga gcggcagaac
     1501 aacctggaga agcaagaaca gcggatccag tcgaaggagc agggcctcca gtccaaagag
     1561 gagggcctcg acaagaagct gctgcaggtg gaccagaaga ccaaggacct cgaaaccctg
     1621 acggagaagc ggaaggccga gctcgagaag ctggaagcaa agcaggcgga agcgaggctc
     1681 ctggtggagg agcaggcgaa gaagctcgag gagatcgccg gcctcacccg ggatgatgcc
     1741 aagaaagagc tcatctcgca gctggaatac gccgccaaga tggacgccgc caagatggtg
     1801 cgccgcatcg aggaggaggc gcaggaggac gctcagaaga aggcccggtg gaccatcggc
     1861 gcggccatcc agcgcgtggc ctccgatgtg gtggccgagc aggccgtgag ctccgtgcag
     1921 ctgcccagcg acgacctcaa gggccgcatc atcggtcggg aaggccgcaa catccgggcc
     1981 atcgaaaagg ccacgggctg cgacctcatc gtggacgaca cgccggagag catcgtcgtc
     2041 tccagcttcg atcccatccg ccgcgaggtg gcccgccagg ccatcctcaa gctgctggcc
     2101 gacggccgca tccacccggc gcgcatcgag gaggtggtgg agaaggtcaa ggtcgacatg
     2161 gaccagcacc tgaaggagat cggcgaggct gcctgcatcg agctgggctt cccggacgtg
     2221 caccccaaga tgcacaagct cgtgggccgc ctgaactacc gcacctccta cggccagaat
     2281 gtgctggagc acaccaagga agtggcccgc atcgccgagt acatggccgg tgagatgggt
     2341 gcggatgccc gcctggcgcg gcgcgccggc ctcttccacg acatcggcaa ggccatcgac
     2401 cgcgaggtgg agggcaccca catcgagatc ggcatgcagc tcatgcagcg ctatggggaa
     2461 aaggaagaag tcatccacgc catgagctgc caccacgggg acttcgagcc ccgcaccgtg
     2521 gaggccatgc tcatcaccgc ggccgatgcc ctcagcgccg cccggcccgg cgcccgccgc
     2581 gagatgctgg agacctacgt caagcgcctg gaacagctcg agggcatcgc caacagctac
     2641 aagggcgtgc agaagagcta cgccatgcag gcgggccgcg agatccgcat cttggtggac
     2701 gccggctccg tgaacgacga ccaggcctac tggatcgcca aggacgtctc ccgccgcatt
     2761 gaatcggaaa tgcagtaccc cggacagatc aaggtgactg tcatgcggga gttgcgcgcc
     2821 gtggaggttg cccggtaagg ttcttggcca ccgtctgata cattcctaca gaccagccag
     2881 acaaagcccg ggtacccctt ggacgactta ccagcccagc cccccgtgac cgggccgctc
     2941 agcgcggctg cggaggaggc cctggtcagg ctgttcgaac agacttccat ctccttccac
     3001 gtgatggacc gggaaggcca catcctccac gccaacgcca agttcagaag ccatctgggc
     3061 ctgacggagg aggatgtccg gtcggtggga ttcgagcgac tgcgccacga ccttccgccg
     3121 gcagaggcgc ggacctggtt tctccaggct ctcgaccggg cggccgacca ggccgacatg
     3181 gccacctggc tgcggcggga cggggtggcc gtgcccgtct gggtgactgt ggcggggcgg
     3241 cggacggacg agggggagcg tctcttcatc tggggccggg accgcagcga ggagcagctg
     3301 gtcaccgacc ggttgaccga gagcgccgac ttgcagcggc acctggcgga aggcatctac
     3361 gccctgagcc tgacccggac gcaggaggag gcctatcagg tgctcatggg ccgggcttcg
     3421 gccatcctgc ccgggcagca ctggttccta ggcagggtcg aatcggaagg gggccagagg
     3481 gccatccgca tggccgcctg gatccccgac ctggaggcta ggctcggccc cgcgattcac
     3541 ggactgaaca tcccggtcga ggattccggc ttcgcccgcg aggtgtacga cctccgccgt
     3601 ctctgtttcg tgcaggacgc ctacgcctcg ccggcgatga tccatccgcc catcgccaag
     3661 gccttcgggc tgcggagcct gctgggcgta ccgctggtct tcgaggggcg gctgacgggg
     3721 gtgctgttcg cggccagctt ccaggatgaa cccgccatgg cgccccggga atcgcagttc
     3781 tccgtgctgc agagcctggc gcgcatcgcc gcactggccc tggagcgtat ccaggcggag
     3841 gcccggctcg aaaaggcggc gggcctggcg agcagcctcg cggccgccgt cagggatctg
     3901 gccgcggaga ccag
//
LOCUS       DATGWW010000533         1711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_87064, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000533 DATGWW010000000
VERSION     DATGWW010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87064"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..522)
                     /locus_tag="VK150_07745"
     CDS             complement(<1..522)
                     /locus_tag="VK150_07745"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HLP31239.1"
                     /translation="MPQAFRRLSLPFLLAALPAAAAASGSGVIQGRIADEQGRPVAGA
                     AVILSNPVSGYRQKVRSDAKGAFTLQNVPFNTYHLDAQAAGLLPGHLDVDVHSQLPFA
                     VSLTLKPEGAVVVVEENLRLVEDHPSTHLDLDKSAIERVPAAVQSRAMESLLLATPGF
                     IADENGRFHFRGSH"
     gene            690..>1711
                     /locus_tag="VK150_07750"
     CDS             690..>1711
                     /locus_tag="VK150_07750"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HLP31240.1"
                     /translation="MKRKQLWILGGGLAVVVIGGLSLAGMKDKGIAVQVATVGKENLQ
                     SKVSANGKVQAVKKVDISANVMGQVTRLAVKEGDPVKAGAFLMEIDPARSKATADAQA
                     AGAEAAAKDWESAKARLQQAKSDFARAEANRKAGIISESDFEQARTALTTTEAAAQAS
                     QRRHDQSRAGLRDATIYLAKSTITAPMDGVVTAKRIELGETAVIGVQNQAGTVLLTIS
                     DMSKVEAEMEVDEASIPSVKLGQEAQVRIDAYPNQTFQGQVTEVGGSPILKLSANEAT
                     KFKVKVWIKNPPLTIKPGLSAQADIFTGNRDQALAIPFQALVMREIKLKPGETHKPGT
                     PREEEGV"
BASE COUNT          319 a          589 c          570 g          233 t
ORIGIN      
        1 gtggctgccc cggaagtgga agcgcccgtt ctcgtcggca atgaaccccg gcgtggccag
       61 gaggaggctc tccatggccc ggctctgcac cgcggcggga acgcgctcga tggcgctctt
      121 gtcgaggtcc aggtgggtgg acggatggtc ctccaccagc cgcaggttct cctccaccac
      181 gaccaccgcc ccctcgggct tcagggtgag gctgacggcg aagggcagct ggctgtggac
      241 gtccacgtcc aggtggccag gcagcagccc cgcggcctgg gcgtccaggt ggtaggtgtt
      301 gaagggcacg ttctgcaggg tgaaggctcc cttggcatcg ctgcgcacct tctggcggta
      361 gcccgagacg gggttcgaca ggatcaccgc ggcgccggcc accggccgtc cctgctcgtc
      421 ggcgatgcgc ccctggatga ccccgctgcc cgaggcggcg gccgccgcag gcagggcggc
      481 cagcaggaag ggcagggaca ggcggcggaa ggcttggggc acggggacac tccagatgaa
      541 attatttttc aattagcagg gtcctccgtc aatgaaaata tttttcattt acgacctcca
      601 gcgccactaa acccctgcat cgccactaaa ccttgcgggc ttccgggcga agcatatgca
      661 tcatctagcc cgtcggggag gcctttgaca tgaagcgcaa gcagctgtgg atcctcggtg
      721 gaggtctggc ggtcgtggtg atcggcggcc tgagcctcgc cggcatgaag gacaagggca
      781 tcgccgtgca ggtggcgacc gtcggcaagg agaacctcca gtcgaaggtg agcgccaacg
      841 ggaaggtgca ggccgtgaag aaggtggaca tctccgccaa cgtcatgggc caggtcacgc
      901 ggctggcggt gaaggaggga gacccggtca aggccggcgc cttcctcatg gaaatcgacc
      961 ccgcccggtc caaggccacg gccgacgccc aggccgccgg cgccgaggcc gccgccaagg
     1021 actgggaatc cgccaaggcg cggctccagc aggcgaagag cgacttcgcc cgggccgagg
     1081 ccaaccgcaa ggccggcatc atctccgaat ccgacttcga gcaggcccgc acggccctca
     1141 ccaccaccga agccgccgcc caggcctccc agcgccgcca tgaccagagc cgcgcgggcc
     1201 tgcgggacgc caccatctac ctggctaagt ccaccatcac cgcccccatg gatggcgtgg
     1261 tcaccgccaa gcgcatcgag ctgggcgaga cggccgtgat cggcgtgcag aaccaggccg
     1321 gcaccgtgct tctcaccatc tccgacatga gcaaggtcga ggcggagatg gaggtcgacg
     1381 aggcgtccat tcccagcgtg aagctgggcc aggaggcgca ggtgcgcatc gacgcctacc
     1441 ccaaccagac cttccagggc caggtcaccg aggtgggcgg cagccccatc ctcaagctca
     1501 gcgccaacga ggccaccaag ttcaaggtga aggtgtggat caagaacccg cccctcacca
     1561 tcaagcccgg cctctccgcc caggcggaca tcttcaccgg gaaccgcgac caggccctgg
     1621 ccatcccctt ccaggccctc gtgatgcgcg agatcaagct caaacccggc gagacccaca
     1681 agcccggcac cccccgcgag gaggagggcg t
//
LOCUS       DATGWW010000534         2271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_39696, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000534 DATGWW010000000
VERSION     DATGWW010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2271
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39696"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..464
                     /locus_tag="VK150_07755"
     CDS             <1..464
                     /locus_tag="VK150_07755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31241.1"
                     /translation="MLAALRVLDPEGGTLGLKWPNDLVAWREGRLVKLGGILGEQAAG
                     RLILGLGVNLTAAPDLPDRAIPPACLADLGLAALPVASLSMAILQYWMDLREILQPAF
                     FWPGPGDAIRWEEGEGTCLGWEPDGRLKVAGAGGIRRLSAGDLRGLETRDP"
     gene            complement(461..1663)
                     /locus_tag="VK150_07760"
     CDS             complement(461..1663)
                     /locus_tag="VK150_07760"
                     /inference="COORDINATES: protein motif:HMM:NF012885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LeuA family protein"
                     /protein_id="HLP31242.1"
                     /translation="MTLDDLINDWNGLPVEGERMPLLNDETLRDGLQSPSVRDPDIAA
                     KRDLTHRLARLGVDALDLGMPGAGPKALAAVRALMVEIRDHRLPLSPNVAVRTIEADL
                     AQVAEIQQRAGIPLEAGAFLGSSPIRMDVEGWNLAFLVDTARHAVAFCRRNQVPVMMV
                     TEDSTRAQPEVLKAIYGAALDEGAQSICLSDTCGHATPDGVRRLVGFIKDEVVKDREV
                     RIDWHGHNDRGLGLANAIAAFEAGADRLHGSILGIGERCGNVALDQLMINLHLMGYPK
                     GDLSDLPALADRVAELCDVEIPANYPVLGRDAFRTGTGVHAAAIVKALHRGDVELADA
                     VYSGVPAALVGRRQEIEIGPMAGHSNVIYWLEMNGYDPSAARVDRILRAAKNSPRILS
                     EAEIRAVL"
     gene            complement(1671..>2271)
                     /locus_tag="VK150_07765"
     CDS             complement(1671..>2271)
                     /locus_tag="VK150_07765"
                     /inference="COORDINATES: protein motif:HMM:NF044477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HLP31243.1"
                     /translation="AAIPPLAERRRASIEQLALRLDPDPGHSRQVARLADELFLALQP
                     HFELGDTERQWLAFAARLHDIGFSIAEKGHHKHGEYLIRNAALPGFWPEEVDLLAQVV
                     RFHRGKPPHHARHEAFRALAPWHRQVVRKLAAILRGADALDRRRRQAVLHVSAKVDDQ
                     CLRVALEAAGEVGPETEAFLEKGALLGTLLDRRVEVTVG"
BASE COUNT          319 a          754 c          853 g          345 t
ORIGIN      
        1 ccatgctcgc cgccctccgg gtgctggatc cagaaggcgg gaccctgggc ctgaagtggc
       61 ccaacgacct ggtggcctgg cgggaggggc ggctggtcaa gctgggcggc atcctgggcg
      121 agcaggcggc gggccgcctc atcctggggc tgggggtgaa cctgaccgca gccccagacc
      181 tcccggaccg ggccattccc ccggcctgcc tggcggacct ggggctggcg gccctcccgg
      241 tggcgagcct ttcgatggct atcttgcaat attggatgga tttgagagag atacttcaac
      301 ctgctttctt ctggcccggg cccggtgatg ccatccgatg ggaggagggc gaaggcacct
      361 gcctgggctg ggaaccggat ggacggctga aggtagccgg ggccggaggc atccgacggt
      421 tgagcgccgg ggaccttcgc ggtctggaga cccgagaccc ttagagcacg gcccggattt
      481 cagcttccga gaggatgcgg gggctgttct tggcggcgcg aaggatccgg tccacccggg
      541 ccgcgctggg gtcgtagccg ttcatttcca gccagtagat gacgttgctg tggccggcca
      601 tcggcccgat ctcgatctcc tggcgccggc ccaccagggc cgcgggcaca ccggaataga
      661 cggcgtcggc cagctccacg tcgccccggt gcagggcctt cacgatggcc gccgcgtgga
      721 ctccggtgcc cgtgcggaag gcgtcgcgcc ccagcaccgg atagttggcc gggatctcca
      781 catcgcagag ctcggccacc cggtcggcca gggcgggcag gtcggacagg tcccccttgg
      841 ggtagcccat gaggtgcagg ttgatcatga gctggtcgag ggccacgttg ccgcagcgct
      901 cgccgatgcc gaggatgctc ccgtgcaggc ggtccgcgcc ggcctcgaag gcggcgatgg
      961 cgttggccag gcccaggccc cggtcgttgt gaccgtgcca gtcgatgcgc acctcgcggt
     1021 ccttgaccac ctcgtccttg atgaagccca ccaggcggcg gacgccgtcg ggggtggcgt
     1081 ggccgcacgt gtcggacagg cagatggact gggcgccctc gtccagggcc gcgccgtaga
     1141 tggccttgag cacctcgggc tgggcccggg tgctgtcctc ggtcaccatc atcacgggca
     1201 cctggttccg gcggcagaag gccacggcat ggcgggctgt gtcgaccagg aaggccagat
     1261 tccaaccctc gacgtccatg cggatgggac tggagcccag gaaggcgccc gcctcaaggg
     1321 ggatgcccgc ccgctgctgg atctcggcca cctgggcgag gtcggcctcg atggtgcgca
     1381 cagccacatt gggactcaag ggcaggcggt ggtcccggat ctcgaccatg agggcgcgca
     1441 cggccgccag ggccttggga cccgcgccgg gcatgcccag gtccagggca tccacgccga
     1501 gccgggcgag gcggtgggtg agatcccgtt tggcggcgat gtcgggatcg cgcaccgagg
     1561 ggctctgcag gccatcccgg agggtctcgt cattgaggag gggcatccgc tcgccttcga
     1621 cggggaggcc gttccagtcg ttgatcaggt catcaagggt catgaaggct tcagcctacg
     1681 gtgacttcga ccctgcggtc cagcagggtc cccaggaggg cccccttctc gaggaaggcc
     1741 tccgtctcgg gccccacctc cccggcggcc tcaagcgcca cccgcaggca ctggtcgtcg
     1801 accttggcgg agacgtgcag caccgcctga cgtcgccgcc ggtccagggc atcggccccc
     1861 cgcaggatgg ccgccagctt gcgcaccacc tggcggtgcc agggggccag ggcccggaag
     1921 gcctcgtgtc tggcgtggtg aggcggcttg ccgcggtgga agcgcaccac ctgggcgagc
     1981 aggtccacct cctccggcca gaagccgggc agggcagcgt tgcggatcag gtattcgccg
     2041 tgcttgtggt ggcccttctc ggcgatggag aagccgatgt catgcagccg ggcggcgaag
     2101 gccagccact gccgctccgt gtcgcccagc tcgaagtggg gctggagggc caggaagagt
     2161 tcatccgcca gccgggccac ctggcggctg tggccggggt cggggtcgag gcgcagcgcc
     2221 agctgctcga tggaagcgcg gcggcgctcg gccagcgggg ggatggccgc c
//
LOCUS       DATGWW010000535         2207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_382681, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000535 DATGWW010000000
VERSION     DATGWW010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382681"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2207
                     /locus_tag="VK150_07770"
     CDS             <1..>2207
                     /locus_tag="VK150_07770"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HLP31244.1"
                     /translation="ALSGGGARGLAHIGVLQRLEEVGFPLDSIAGTSAGAMVGALYAS
                     GFSALEIEDLFGRLDLTRAFLEPLWRNPGETLGEQEDRSATLISIERQDGRLTLAQGL
                     RSGIEVQHTLQGLLARGSYFSNGDFDRLQRPLRVLATNLETGQGRVFGKGDLVEAVRA
                     SMSIPGGFRPVVIDGQQYVDGALVENLPVSTVKEAFHPDLVIAVDISAPLEHRPSTSI
                     LSVATRSLDLVVERRQWESRAAADFLIRPEIKDAPFLEYGTAWAKLVREGREAFDARR
                     SDLDVLLRSRMSQERLPVSRVAFECPGGPSEAILGLLSDSLKPDKGGVLLQEVQILLQ
                     QVLVHGLAQEAWATVDAGEVLTVHLRPYPAVTSVEVQAPEGWRPAVQAAVAQAIKLGE
                     PFNPQVFGRMMGHLVYRFLMEGGPLVDVRGSVFDPAKGRLHIAIEEPFITKVDIRPAP
                     GARVDEAHLVRLLGELKGRPFRPDDLQKRVALAEHRLHLAELRYQIRPAGPSGAVITL
                     VPVPQQRERLDFSLGYESTLGGQMGLAYRALNLPFRSAETELSAARNRLQEQASLVLR
                     SPFGFSPGAGMELAANYWQQRMEVPLSYATVELPGDGTEARISASDLLLKTYIRFSNL
                     GTGKLSLDLGRRHAAFREDGIRNTQRQDSIFLSGEWDNLDRHTLPRRGLLLRARAGTG
                     HADPGNLPATSFQQAYFRMKGLATFGESVGANLDLELGQGRRLPLDRWWVLGGP"
BASE COUNT          318 a          775 c          780 g          334 t
ORIGIN      
        1 gccctcagcg ggggcggcgc ccggggcctc gcccacatcg gggtgctgca gcgcctggaa
       61 gaggtgggct tccccctgga cagcatcgcg gggaccagtg ccggcgccat ggtcggcgcc
      121 ctgtatgcga gtgggttctc cgccctcgag atcgaggatc tcttcggccg cctcgacctc
      181 acgcgggcct tcctggagcc gctctggcgg aaccccggcg agaccctggg cgagcaggag
      241 gaccgaagtg ccacgctgat ttccatcgag cgccaggacg gccggctcac cctggcccag
      301 ggcctgcgaa gcgggatcga ggtgcagcac acgctccagg gcctcctggc ccgggggtcg
      361 tacttctcca atggcgattt cgaccggctg cagcggcccc ttcgggtgct ggccacgaac
      421 ctcgagacgg gccaggggcg cgtcttcggg aagggcgacc tggtggaggc ggtcagggcc
      481 tccatgtcca ttcccggcgg cttccgtccc gtggtgatcg acggacagca gtacgtggac
      541 ggcgccctgg tggagaacct gccggtcagc acggtgaagg aggccttcca tccggacctg
      601 gtcatcgccg tggacatcag cgcgcccctg gagcaccggc cttccaccag catcctgtcc
      661 gtggccaccc gcagcctgga cctggtggtg gagcggcggc agtgggaaag ccgggcagcc
      721 gccgatttcc tcatccgccc cgagatcaag gacgcgccct tcctcgagta cggcaccgcc
      781 tgggcgaagc tggtgcggga gggccgcgag gccttcgacg cccgccggag cgacctggac
      841 gtcctgctgc gcagccggat gagccaggag cggctgccgg tctcccgggt ggccttcgag
      901 tgccctgggg gacccagcga ggccatcctt gggctgctgt ccgacagctt gaagccggac
      961 aagggcggcg tactcctcca ggaggtccag atcctgctcc aacaggtgct ggtccacggc
     1021 ctcgcgcagg aggcctgggc gacggtggat gccggcgagg tgctgacggt ccacctgcgg
     1081 ccctacccgg cggtgacctc ggtggaggtg caggcccccg agggctggcg tccggcggtc
     1141 caggccgccg tggcccaggc catcaaactc ggagagccct tcaatcccca ggtgttcggc
     1201 cggatgatgg gtcacctggt ctaccgcttc ctcatggagg gcggacccct ggtggatgtc
     1261 cgcggttcgg tcttcgaccc ggccaagggc cgtctgcaca tcgccatcga ggagcccttc
     1321 atcacaaagg tggacatccg ccccgcgccg ggcgcccgcg tggacgaagc ccacctggtg
     1381 cggctgctgg gtgaactgaa gggccgcccc ttccgccccg acgacctcca gaagcgggtc
     1441 gccctggcgg aacaccgcct ccacctggcg gagctgcgct atcagatccg cccggccggt
     1501 ccctctggcg cggtgatcac gctggtcccc gtgccccagc agcgggagcg cctggatttc
     1561 tccctgggct acgagtcgac cctgggcggc cagatgggcc tggcctaccg ggccctgaac
     1621 ctgccgttcc gcagcgcgga gacggagctg agcgccgccc ggaaccgcct gcaggagcag
     1681 gcttcgctcg tcctgcgaag cccgttcggg ttttcgccgg gggcgggcat ggaactggcc
     1741 gccaactact ggcagcagcg gatggaggtg cccctttcct atgcgacggt ggaactgccg
     1801 ggcgatggca cggaggcccg gatcagcgcc tccgacctgc tcctgaaaac gtacatccgg
     1861 ttcagcaacc tgggcacagg caagctgagc ctggacctgg gccggcgtca cgccgccttc
     1921 cgcgaagatg gcatccggaa cacccagcgg caggattcga ttttcctctc gggggaatgg
     1981 gacaacctcg accggcacac gcttccgcgg cgcggcctgc tcctgcgggc cagggccggc
     2041 acggggcacg ccgaccccgg caacctccct gccacgagtt tccagcaggc ctacttccgg
     2101 atgaagggcc tggccacgtt cggggaatcc gtcggggcga acctggacct ggagctgggc
     2161 cagggtcgcc gcctgcccct ggatcgctgg tgggtgctgg gcggacc
//
LOCUS       DATGWW010000536         1671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_265091, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000536 DATGWW010000000
VERSION     DATGWW010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265091"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..866
                     /locus_tag="VK150_07775"
     CDS             30..866
                     /locus_tag="VK150_07775"
                     /EC_number="3.4.15.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR02069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009057 - macromolecule catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycinase"
                     /protein_id="HLP31245.1"
                     /translation="MKHLLLALAFTCFGLDAGNPPAPPKGTLVIVGGGGMPQDILDAF
                     LAASGGKGGVVGIVPTSTSDPDGALKEWKADLEKAGLAFVALDVRAREDASKPGLLAE
                     ARRCTGFWFSGGDQGRVGDKIVGTPLQQVILARYRAGAAVGGTSAGAAIMSKVMLTGD
                     DRNGKEALSEFGPGAYQTREGMGFLPEGVVVDQHFLRRGRENRLFSVIMERPDHLGLG
                     IDEATALVVKDGHAKVVGERSVMVFDPARMTLRGEAFRDLRIHVLRAGQSIDLTTRKV
                     SQ"
     gene            863..>1671
                     /locus_tag="VK150_07780"
     CDS             863..>1671
                     /locus_tag="VK150_07780"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HLP31246.1"
                     /translation="MSGARHAILALLLALPGLAGPVQAPFPADHRALRKTVSYAEMTA
                     FLKAAAKPGFITVSEEGRSTQGRSLFLVHLNRGGAKARFRVLYYAQQHGDEVAGKDAL
                     LTLIRDIAERPTLLPEDVDLYLMPMLNPDGAEAHRRFNGAGEDLNRDHLLLAQPETRA
                     LHRVARRVRPHLAVDSHEFGRDGEGYRARGWEAWPVITMDAANHPLIPEYLKTTGLAA
                     VAAAEPLQRKAGHAYRRYLVGGPPPDEELRPSTPEVDDGRNGLGTLGALSF"
BASE COUNT          242 a          646 c          556 g          227 t
ORIGIN      
        1 gctccaccgc cttgtgatgg aatggagaca tgaagcacct tctgctcgcc ctcgccttca
       61 cctgcttcgg ccttgacgca gggaatccgc ccgctccccc gaaaggcacc ctggtcatcg
      121 tcggcggcgg gggcatgccc caggacatcc tcgacgcatt cctcgcggcc tccggcggca
      181 agggcggcgt cgtgggcatc gtccccacgt ccaccagcga ccccgacggc gccctcaagg
      241 aatggaaggc cgacctcgag aaggccggtc tcgccttcgt ggcgctggac gtccgcgccc
      301 gggaggacgc ctcgaagccc ggactcctgg ccgaggcccg gcgctgcacg ggcttctggt
      361 tctccggcgg cgaccagggc cgcgtgggcg acaagatcgt gggcaccccg ctccagcagg
      421 tcatcctcgc gcgctaccgg gccggggccg ccgtcggcgg caccagcgcc ggcgccgcca
      481 tcatgtcgaa ggtcatgctc acgggcgatg accgaaacgg caaggaggcc ctctccgagt
      541 tcggtcccgg cgcctaccag acccgggagg gcatgggctt ccttcccgag ggcgtggtgg
      601 tggaccagca cttcctgcgc cggggccggg agaaccggct cttcagcgtc atcatggagc
      661 gcccggacca cctgggcctc ggcatcgacg aggccaccgc gctggtggtc aaggacggcc
      721 acgcgaaggt ggtgggggag cggtccgtca tggtcttcga tcctgcccgc atgaccctca
      781 ggggcgaggc cttccgcgac ctccgcatcc atgtgctccg ggccgggcag tccatcgacc
      841 tgaccacccg gaaggtctcc cagtgagcgg cgcgcgccac gccatcctgg ccctgcttct
      901 cgcgctgccg ggcctcgccg gcccggtgca ggcgcccttc ccggcggacc accgcgccct
      961 ccgcaagacc gtgagctatg ccgagatgac ggccttcctg aaggctgcgg cgaagcccgg
     1021 cttcatcacc gtctccgagg agggccggag cacccagggc cggtcgctct tcctcgtcca
     1081 cctcaaccgc ggcggcgcca aggcccgctt ccgggtgctc tactacgccc agcagcacgg
     1141 cgacgaggtg gccggaaagg acgccctgct caccctgatc cgcgacatcg ccgagcggcc
     1201 cacgttgctg cccgaggacg tggacctcta cctgatgccc atgctcaacc ccgacggcgc
     1261 cgaggcccat cgccgcttca acggcgccgg cgaggacctg aaccgggatc acctcctgct
     1321 ggcccagccc gagacccgcg ccctgcaccg ggtggcccgg cgcgtccggc cccacctggc
     1381 cgtggacagc cacgaattcg gccgcgacgg cgaaggctac cgggccaggg gctgggaggc
     1441 ctggcccgtc atcaccatgg acgccgccaa ccatccgctg atccccgagt atttgaagac
     1501 caccggcctg gccgccgtgg ccgccgccga gccgcttcag cggaaggccg gccacgccta
     1561 ccgccgctac ctggtgggcg gaccgccacc ggacgaggag ctgcgcccct ccacgccgga
     1621 ggtggacgac ggccggaacg gcctgggcac cctcggggcc ctgtccttca t
//
LOCUS       DATGWW010000537         1705 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_354793, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000537 DATGWW010000000
VERSION     DATGWW010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354793"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1344
                     /locus_tag="VK150_07785"
     CDS             <1..1344
                     /locus_tag="VK150_07785"
                     /inference="COORDINATES: protein motif:HMM:NF015926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF349 domain-containing protein"
                     /protein_id="HLP31247.1"
                     /translation="ALWTRFRTACNTFFERKDLQQQGNLERKLELCALAETLRDSTEW
                     KQTGARIKEAQERWKTIGPVPKDQAEAVWARFHGACEKFFQARKAHLEKLDEERPRNQ
                     AKKEELCALVESLDVLPTDAERFERIKEAQAAWKEIGPAPREVEDALWERFRKPIDAY
                     FEGRKSRMEGERKTREENAKAKEDICLEAESLKDSTEWKPTIEKIKALQERWKATGPA
                     PREVDQALWRRFRAACDVFFDRLKENAARRDQERGSNLRRKTDLCFLAEMLSERPLTP
                     EEQKARDDWKADKHPQDFVRFLANEGPVDWKDRTEKIKALQREWKAIGPVPKDVSESL
                     WERFHTACDAFFEERRDALGLPPEDPQVNLDKKLELIEEAEALAQAGPNEGAAERARA
                     LGREWRRIGSVPRAQSDYVWRRFTAAIDAVLGDSSVREGHGEGGSGNETEAETPA"
     gene            complement(1421..>1705)
                     /locus_tag="VK150_07790"
     CDS             complement(1421..>1705)
                     /locus_tag="VK150_07790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31248.1"
                     /translation="GLASQLASTLGEGAGRSDREFREQSLELTAAGVGHFSPYTHFRI
                     VQQYRYEEGMLVETVELFRRRDGKEEPFMRMEERAHIHARSRLSEAPTRL"
BASE COUNT          321 a          587 c          564 g          233 t
ORIGIN      
        1 gccttgtgga cccgcttccg caccgcttgc aacaccttct tcgagcgcaa ggacctgcaa
       61 cagcagggca acctcgagcg caaattggag ctctgcgccc tggcggagac cctgcgggac
      121 tccaccgagt ggaagcagac cggcgcccgc atcaaggagg cgcaggagcg ctggaaaacc
      181 atcggccccg tgcccaagga ccaggccgag gccgtctggg cccgcttcca cggcgcttgc
      241 gagaagttct tccaggcccg caaggcccat ctggagaagc tcgacgagga gcgtccgcgg
      301 aaccaggcga agaaggaaga gctttgcgcc ctggtggaga gcctggacgt cctccccacc
      361 gacgctgagc gcttcgagcg gatcaaggag gcccaggccg cctggaagga aatcggtccc
      421 gccccgcgcg aggtcgagga cgccctgtgg gagcggttcc ggaagcccat cgatgcctac
      481 ttcgaaggcc gcaagtcccg catggagggc gagcgcaaga cccgtgagga gaacgccaag
      541 gccaaggagg acatctgcct cgaggcggag tccctcaagg attccaccga gtggaagccc
      601 accatagaga agatcaaggc cctgcaggag cgctggaagg ccacgggtcc cgccccgcgc
      661 gaggtggatc aggcgctgtg gcgccgcttc cgcgccgcct gcgacgtctt cttcgaccgc
      721 ctcaaggaga acgccgcgag gcgcgatcag gagcgcggtt ccaacctgcg gcgcaagacc
      781 gatctctgct tcctcgcgga gatgctcagc gaacgtcccc tcacccctga agagcagaag
      841 gcccgcgacg actggaaggc cgacaagcat ccccaggact tcgttcgctt cctcgccaac
      901 gagggccccg tggactggaa ggaccgcacc gagaagatca aggccctgca acgcgagtgg
      961 aaagccatcg gccccgtgcc caaggacgtc agcgaatccc tctgggagcg tttccacacc
     1021 gcctgcgatg ccttcttcga ggagcgccgc gatgccctcg gacttcctcc ggaagatccg
     1081 caggtcaacc tggacaagaa gctcgagctc atcgaggagg cggaggccct ggcccaggcc
     1141 ggccccaacg agggggccgc ggagcgggcc cgcgccctgg gacgggaatg gcgccgcatc
     1201 gggtccgtcc cgcgggctca gagcgattac gtctggcggc gcttcaccgc ggccatcgac
     1261 gccgtcctgg gtgactcctc ggtccgcgag gggcatggcg aaggcggctc cggaaacgag
     1321 accgaggccg agacaccggc ctgaattccg cgcggggcgg cccgaaacga aatcgtgcga
     1381 ctccggcacc ccggcggtac ttcccgggac cggaggcttc ctagagccgg gtcggcgcct
     1441 ccgacaaacg gctgcgcgca tggatgtggg cgcgctcctc catgcgcatg aagggttcct
     1501 ccttcccgtc cctccgccgg aaaagttcca cggtctccac caacatgcct tcctcgtagc
     1561 ggtactgctg cacgatgcgg aaatgggtgt aagggctgaa atgcccgact cctgccgccg
     1621 tgagttccag gctctgctcc cggaactccc ggtccgagcg acccgctcct tcacccaggg
     1681 tcgaggcgag ctgggaggct aggcc
//
LOCUS       DATGWW010000538         3860 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_116389, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000538 DATGWW010000000
VERSION     DATGWW010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3860
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116389"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..730)
                     /locus_tag="VK150_07795"
     CDS             complement(<1..730)
                     /locus_tag="VK150_07795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31249.1"
                     /translation="MTASPLIEFIAREHPAFVHIPLGLVAVLPLAMLASFHPRHGKIL
                     TGTSFFLAGIGWLASTVALVSGLLWGRQINLIGPSGFLPVVASEKQVLQKILQIHILA
                     ACAGFLIGGICVFLLWRIWRRDYNSGLEGADHRHHAGRRFWERGVGAPALLLGFLWLG
                     SWGFSGKLGGIMVFGNEETNRAAAEADAAKRNDAEAELPIRALDYASLEPAEDKPVRS
                     KAHGDRWRRIWVTASGIDAYKAGRP"
     gene            complement(743..1612)
                     /locus_tag="VK150_07800"
     CDS             complement(743..1612)
                     /locus_tag="VK150_07800"
                     /inference="COORDINATES: protein motif:HMM:NF040196.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5777 family beta-barrel protein"
                     /protein_id="HLP31250.1"
                     /translation="MTRKTAPLLACALLAGGALQAESSEYPLVGNLPSAERMQYWDIG
                     VVFTHRFVQPVKDHGKDVYGLDGYTYAGLGFTFGIKPVPGLNAFIYRTADNKTFTFGL
                     QQQVWNGERIRMAVRAERFDEVVKESVTPFGKVGVSGAAVQVPTEIFITDDIIFSLVP
                     TYITKTTTTDTILAVPPGQTPNTTPNTGGVFNVGVGLRIGFTEKFSFVGEYYPRPSKF
                     SKAAPGGITDGTTYQNGFAAGFSYKTFKHRFTVMGTNATGTTANQVLSGDYGGGPRPS
                     AQWSIGFNVARVF"
     gene            complement(1632..1982)
                     /locus_tag="VK150_07805"
     CDS             complement(1632..1982)
                     /locus_tag="VK150_07805"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HLP31251.1"
                     /translation="MRKTLVLTLLAAGSALMAGDPAKDLPKFQGGDLQKYWMDACARC
                     HGVNGNGRDNSGKPLPDAGFDFTDSRKANKKKDSDWVKVTLEGKDKMPAFKDKMSADD
                     AQKMIAIMRKFSAK"
     gene            complement(2035..>3860)
                     /locus_tag="VK150_07810"
     CDS             complement(2035..>3860)
                     /locus_tag="VK150_07810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31252.1"
                     /translation="PAGTQPGCYNATLCHADAGAPHPLGAVWTDPTSSAYHGIQAKAD
                     LKYCQSCHGTPGTTKFDGGSATTACSSCHNKATGAGAHPTTWYHASVNTFPGYVPSHR
                     NATDPLNANGSCVICHAVTKTGTSTLPAAPSCYSASFGNSEHAAVSCHANGPGVAPHP
                     IGVTWTDPTNAGTTDANFHGIQAKSDLLYCQTCHGVPGTNKFDGGTTTTTCSSCHTQA
                     KAHPDSWYRSPSSFGSGTYVASHRNTPAAIDVTQRAAVCGLCHAVTSAGGTPPMAGAP
                     GCFTASFNAVGCHANGPGAAAHPAPFLSGMTTTSGTGNTHQLVTPAQFAGECINCHDE
                     TGPGTTKAGPSCTKCHISDSPLAAGKGPGTCASCHSDPNFKTKGPAGTTFPNIAGAHA
                     KHLGLPTALDCATCHAGSQPGEGGANQPHYNGANRGPNGTPTGTGPAPVTINAVFKAQ
                     TGTLGTTPSLSAFTCNAVSCHGGQTTPGWQSGKLTVDGNTYCRACHKTANTATQYNDA
                     TGTHTDNSTHSNAACNVCHDMTTANTSQGAVNHWKYLNTTAVIVAPDQLSSQTIKFIG
                     GTITDPGGTYTPSGTTIGNGNCTVNCHSGGGKNHNPESWRK"
BASE COUNT          545 a         1130 c         1474 g          711 t
ORIGIN      
        1 agggccgtcc cgccttgtag gcgtcaatgc cggaggccgt cacccagatc cgccgccagc
       61 ggtccccgtg ggccttgctg cgaacgggct tgtcctcggc gggttccagg ctggcatagt
      121 ccagggcccg gatgggcagc tccgcctcgg cgtcattgcg cttggctgca tccgcctcgg
      181 cggcggccct gttggtctcc tcgttgccga agaccatgat gccgcccagc tttccgctga
      241 agccccagct ccccagccag aggaatccga gcagcagcgc cggggccccc acaccccgct
      301 cccagaagcg ccggcccgcg tggtggcggt ggtccgcgcc ctcgaggccc gagttgtagt
      361 cgcggcgcca gatgcgccag agcaggaaga cgcagatgcc gccgatgagg aagcccgcgc
      421 aggccgccag gatgtgaatc tggaggatct tctggagcac ctgcttttca ctggccacca
      481 cgggcaggaa cccggagggg ccgatgaggt tgatctgccg gccccacagc agcccgctga
      541 ccagggcgac ggtgctggcg agccaaccga tgcccgcgag gaagaaggat gtgccggtca
      601 ggatctttcc gtgacggggg tggaaggagg ccagcatggc caggggcagc acggccacca
      661 ggcccagcgg gatgtggacg aaggccgggt gttcccgggc gatgaattcg atcaggggag
      721 atgcggtcat gggattcctg gattagaaga cgcgggccac gttgaacccg atggaccact
      781 gggccgaggg cctggggcct ccgccgtagt cgccgctcag cacctggttc gcggtggtac
      841 cggtggcatt ggtgcccatg acggtgaacc gatgcttgaa ggtcttgtag gagaagcccg
      901 cggcgaagcc gttctggtaa gtggtgccat cggtgatgcc accgggggcc gccttcgaga
      961 acttcgaggg ccggggatag tactcgccga cgaaggagaa cttctccgtg aagccaatgc
     1021 gcagccccac gcccacgttg aacacgccgc ccgtgttggg cgtggtgttc ggcgtctggc
     1081 ctggcggcac ggcaaggatg gtgtccgtgg tggtggtctt ggtgatgtag gtcggcacca
     1141 gggagaagat gatgtcgtcc gtgatgaaga tctcagttgg gacctgcacg gccgcgccgg
     1201 agacgcccac tttcccgaag ggcgtgacgg actccttcac gacctcgtca aaccgctcgg
     1261 cgcgaacggc catgcggatc cgctcgccgt tccacacctg ctgctgcagg ccgaaggtga
     1321 aagtcttgtt gtccgccgtg cggtagatga aggcattcaa cccgggaacg ggcttgatcc
     1381 cgaaggtgaa gcccaggccc gcataggtgt agccgtccag cccgtagaca tccttgccgt
     1441 gatccttcac gggctggacg aaccggtggg tgaacaccac gccgatgtcc cagtactgca
     1501 tccgctcggc gctgggcagg ttgcccacca gcgggtactc ggacgattcg gcctggagcg
     1561 ctcccccggc cagtagggcg caggcgagca ggggagcggt cttccgtgtc atcgatggat
     1621 ctccaggatc actacttggc cgagaacttg cgcatgatgg cgatcatctt ctgagcgtca
     1681 tcggccgaca tcttgtcctt gaaagccggc atcttgtcct tgccttccag ggtgaccttc
     1741 acccagtcgc tgtccttctt cttgttggcc ttgcggctgt ccgtgaaatc gaagccggcg
     1801 tcaggcaggg gcttgccgct gttgtcgcgg ccattgccgt tcacgccgtg gcagcgggcg
     1861 caggcatcca tccagtactt ctggagatcg ccaccctgga acttgggcag gtccttggcg
     1921 gggtcgccgg ccatgagggc cgagccggcg gcgagaaggg tgagaacgag ggtcttgcgc
     1981 atgaggaggc tccgtgaaaa ggaggttgaa aggcgaaggt gagctgctgg acgactactt
     2041 tctccaggac tcggggttgt ggttcttgcc gccgccggag tggcagttca cggtgcagtt
     2101 gccgttgccg atggtcgtgc ccgagggcgt gtaggttccg ccggggtcgg tgatggtgcc
     2161 accgatgaac ttgatcgtct ggctggatag ctggtcggga gcgacgatca ccgcggtcgt
     2221 gttgaggtac ttccagtggt tgaccgcgcc ctggctggtg ttggccgtgg tcatgtcgtg
     2281 gcacacgttg cacgccgcgt tgctatgcgt gctgttgtcg gtgtgggtgc cggtggcatc
     2341 gttgtactgc gtggcggtgt tggccgtctt gtggcaggcg cggcagtagg tgttgccgtc
     2401 caccgtgagc ttgccgctct gccagccagg cgtcgtctgg ccgccgtggc agctcaccgc
     2461 gttgcaggtg aaggccgaga ggctgggggt ggtgcccagg gtgccggtct gggccttgaa
     2521 caccgcgttg atggtcacgg gggccgggcc ggtgccggtc ggcgtcccgt tggggccccg
     2581 gttggcgccg ttgtagtggg gctggttggc gccgccctcg ccgggctgcg agccggcgtg
     2641 gcaggtggcg cagtccagtg ccgtcggcag gcccaggtgc ttggcgtggg cgccggcgat
     2701 gttggggaag gtggtgcccg cggggccctt ggtcttgaag ttggggtccg agtggcagga
     2761 ggcgcaggtg ccgggcccct tgccggcggc cagcggggaa tcactgatgt ggcacttggt
     2821 gcagctgggt ccggccttgg tggtgcccgg gcccgtctcg tcgtggcagt tgatgcactc
     2881 gccggcgaac tgggccgggg tcaccaactg gtgggtgttg cccgtgccgg aggtggtggt
     2941 catcccgctg aggaagggcg cgggatgcgc cgcggcgccg gggccgttgg cgtggcagcc
     3001 gacggcgttg aaggaggccg tgaagcagcc cggggctccg gccatgggcg gcgttccgcc
     3061 tgccgaggtc actgcgtggc agaggccgca gaccgccgcc cgctgggtga catcgatggc
     3121 cgccggcgtg ttgcggtggg aggccacata ggtgccgctg ccgaagctgc tgggcgagcg
     3181 gtaccagctg tccgggtggg ccttggcctg ggtgtggcag ctggagcagg tcgtggtggt
     3241 ggtgcctccg tcgaacttgt tcgtgccggg gacgccgtgg caggtctggc aatacaggag
     3301 atcggacttg gcctggatac cgtggaagtt ggcatccgtg gtgccggcgt tggtgggatc
     3361 cgtccaggtc acgccgatgg gatggggcgc cacgccggga ccattcgcgt ggcaggacac
     3421 ggccgcgtgt tcagagttcc cgaagctcgc gctgtagcag ctgggcgcgg cggggagcgt
     3481 ggaagtgccc gtcttggtca ctgcgtggca gatcacgcag gagccgttgg cgttcagcgg
     3541 atcggtcgca ttgcggtgcg acggcacata gccggggaag gtgttgaccg atgcgtgata
     3601 ccaggtggtc gggtgggctc cggcgcccgt ggccttgttg tggcaggagc tgcaggccgt
     3661 ggtggcggag ccgccgtcga acttggtggt gcccggcgtc ccgtgacagc tctggcagta
     3721 cttcaagtcg gccttggcct ggatgccgtg gtaggcggag ctggtgggat ccgtccagac
     3781 ggcccccagg ggatgcgggg cgccggcgtc cgcgtggcag agcgtagcgt tgtagcaacc
     3841 gggctgggtt ccggcggggg
//
LOCUS       DATGWW010000539         2658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_449829, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000539 DATGWW010000000
VERSION     DATGWW010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2658
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_449829"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..612
                     /locus_tag="VK150_07815"
     CDS             <1..612
                     /locus_tag="VK150_07815"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HLP31253.1"
                     /translation="LEFGIDLSVASATKYLAGHSDVVAGVIAGTDADVVACWHLTKIL
                     GPTLDPMAAWLLHRGLKTLPLRMRRASDNAQALAQWLLWQPHVARVDYPGLPAHPGHE
                     VAVRQMEKGFGAMVAFELRAGLRAGQAFCEALEIITRGVSLGGVESLIQHPASMSHLK
                     TPPDVKARLGITDGLLRFSVGIEDQPDLIADLEKGFQAAAGAR"
     gene            609..809
                     /gene="thiS"
                     /locus_tag="VK150_07820"
     CDS             609..809
                     /gene="thiS"
                     /locus_tag="VK150_07820"
                     /inference="COORDINATES: protein motif:HMM:TIGR01683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HLP31254.1"
                     /translation="MKLHINGEARETPALATVADLAAWLDLPAFGSAIELNGEVIRRA
                     DHPAAPLKEGDRLEVVRLVGGG"
     gene            complement(812..2503)
                     /locus_tag="VK150_07825"
     CDS             complement(812..2503)
                     /locus_tag="VK150_07825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HLP31255.1"
                     /translation="MSSTRSPLTHARTAGLGIMAAGLVFLAGCGGGSGSSGPSTVSVT
                     VQGQYEKRVLSATGFSATLTTLPTRYGFAQVVNSGSGQVVASGALGADGTRTFTVPRG
                     ITFYVALYATTEVPNTTGGGFYFYGEVKKATPAASYASADAFNQTPTWATTSADMAAD
                     SSGNLTLRATDATGEAGAFAIADQMTTFALGMRTLEPTLQLPELYPFWTAGTTTTYPA
                     AARATGGSLLVQSQNLGGRAIFQHEIRYAGPAAADRGADAYNDSVLGDTFAHLLFADS
                     SLAYGNGTYGTIVRRDNDPGYVAATDASEPATAFAGGFSTFLSAAFRNDPYVYDVPAG
                     GGAPFVFRLDQHTGFTPTGGGEFYAGSVSRSLWGIWKNGAVFGGSATGLKTLWSATIP
                     TTASQGYEYGNTPLACYPTYLTGLSRLAGAAATAAIQSELFLENVGNGVDPTSTLYLN
                     STALWRLPAIPFTDSGSFPTYAAGWSFDWNQAQAYRFTHGGGPRTLTLSTPGAGLVLD
                     LFDSVGLLRQTTASSAGNGVINLASLPTGTYVVRVRVDPYVVYPNGTITYTLSVN"
BASE COUNT          387 a          859 c         1029 g          383 t
ORIGIN      
        1 ctggaattcg gcatcgacct cagcgtggcc tcggcgacca agtacctcgc cggccactcg
       61 gacgtggtgg cgggcgtcat cgcgggcacg gacgccgacg tggtggcctg ctggcacctc
      121 accaagatcc tgggccccac gctcgatccc atggccgcgt ggctcctgca ccgcgggctg
      181 aagaccctgc ccctgcgcat gcggcgggcc tcggacaacg cccaggccct ggcccagtgg
      241 ctgctctggc agccccacgt ggcgcgggtg gactatccgg gcctgcccgc ccaccccggc
      301 cacgaggtcg cggtgcggca gatggagaag ggcttcggcg ccatggtcgc cttcgagctg
      361 cgggccggcc tccgggcggg ccaggccttc tgcgaggccc tggagatcat cacccggggc
      421 gtgagcctcg gcggcgtgga aagcctcatc cagcaccccg ccagcatgag ccacctgaag
      481 accccccccg atgtgaaggc ccggctgggc atcacggacg ggctgctgcg cttctcggtg
      541 gggatcgagg atcagcccga cctcatcgcc gacctggaga agggattcca ggcggctgcg
      601 ggggcccggt gaagctgcac atcaacgggg aggcccgcga aaccccagcc ctggcgaccg
      661 tggcggatct ggccgcctgg ctggacctgc cggccttcgg cagcgccatc gagctgaacg
      721 gggaggtcat ccgccgggcc gaccaccccg ccgcccccct gaaggagggg gaccggctcg
      781 aggtggtgcg gctggtgggc ggcggctagg ttcagttgac ggacagcgtg taggtgatgg
      841 tcccgttggg atagaccacg tagggatcca cccgcacacg gaccacatag gtgcccgtcg
      901 gcaggctggc caggttgatg accccgttcc ccgccgagga tgcggtggtc tggcgcagca
      961 ggccgacgct gtcgaagagg tcgagcacga gacccgcgcc gggcgtgctg agggtcaggg
     1021 tgcgcgggcc gcccccgtgg gtgaagcggt aggcctgggc ctggttccag tcgaaggacc
     1081 agcccgccgc gtaggtgggg aaggacccgg aatccgtgaa ggggatggcc ggcaggcgcc
     1141 acagggcggt gctgttcaga tagagggtgg aggtcggatc gacgccgttg cccacgttct
     1201 ccaggaacag ttcggactgg atggcggcgg tggcggccgc cccggccagg cggctgagcc
     1261 cggtcaggta ggtggggtag caggccaggg gcgtgttgcc gtactcgtag ccctgggagg
     1321 cggtggtggg gatggtggcg ctccacaggg tcttgagccc cgtcgcgctg cccccgaaga
     1381 cggcgccatt cttccagatg ccccaaaggg agcgggacac ggagccggcg tagaactcgc
     1441 cgccgcccgt gggcgtgaag cccgtgtgct ggtcgaggcg gaacacgaag ggagcgcccc
     1501 ccccggcggg cacgtcatag acgtagggat cgttgcggaa cgccgcggag aggaaggtgc
     1561 tgaacccgcc cgcgaaggcc gtggcgggct cggaggcgtc cgtggcggcc acatagccgg
     1621 gatcgttgtc tcggcggacg atggtgccgt aggtgccgtt gccgtaggcc aggctgctgt
     1681 cggcgaagag gaggtgggcg aaggtgtcgc ccaggacgct gtcgttgtag gcgtcagcgc
     1741 cccgatccgc cgccgccggg cccgcgtacc ggatttcgtg ctggaagatg gcccggccgc
     1801 ccaggttctg gctctggacc agcagggacc cgcccgtggc gcgggccgcg gccggataag
     1861 tggtcgtggt gcccgccgtc cagaaggggt atagctctgg cagctgcagg gtgggctcca
     1921 gggttcgcat ccccagggcg aaggtcgtca tctggtcggc gatggcgaag gccccggcct
     1981 cgccggtcgc gtccgtcgcc cgcagggtga ggttgccgct gctgtcggcg gccatgtcgg
     2041 cgctggtggt ggcccaggtc ggggtttggt tgaaggcgtc ggcgctggcg tacgaagcgg
     2101 cgggggtggc cttcttgacc tctccgtaga agtagaagcc gccgcccgtg gtgttgggca
     2161 cctcagtggt ggcgtagagg gccacgtaga aggtgatgcc ccggggcacc gtgaaggtgc
     2221 gggtgccgtc ggcgcccagg gcgcccgagg ccacgacctg acccgagccg ctgttcacca
     2281 cctgggcgaa gccgtaccgg gtggggaggg tcgtgagggt ggcgctgaaa cccgtggcgg
     2341 agaggacccg cttctcatac tgcccctgca cggtcaccga gacggtgctg gggccgctgc
     2401 tgccgcttcc gccgccgcaa cccgccagga aaacgaggcc cgcggccatg attccaaggc
     2461 ctgccgtccg tgcgtgggtg agtggggacc gggttgagga catggtggac tccaaggaag
     2521 ctgggggggg acagccctgc aggtcaaggg tcgtgccaac ggcgtcgccg gaccacctag
     2581 cgccagacgt cccaccgccc atcgggccag gtgcccgtgg ccaccaccgt ccagttcgcg
     2641 ggcaaacgca ggtctggc
//
LOCUS       DATGWW010000540         2002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_314054, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000540 DATGWW010000000
VERSION     DATGWW010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2002
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_314054"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1183)
                     /gene="der"
                     /locus_tag="VK150_07830"
     CDS             complement(<1..1183)
                     /gene="der"
                     /locus_tag="VK150_07830"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HLP31256.1"
                     /translation="MKLPLVALCGRPNVGKSTLFNRLTRSRAALVHDLPGMTRDRSYG
                     RVTCLGEDGGAEEVFELVDTGGLDFEGDDVITQGITRMAEAALGEAHVAILLVDGHDG
                     LTAGDEEIAARLRRQGKPILLVINKLDGMKGGAPDAGFYGLGFDQVLAISAAHGAGVP
                     ELIEALRARLPFHRTPEEATIHSLSDELRFALIGRPNVGKSSLTNRLLGYERSLVSEV
                     AGTTRDTVDTVFHVKDRVYRMIDTAGIRKKGKTHEGAEKLSILKAKQAMARADVSLLL
                     LDAVEGATHQDAVIAGYAQEAGAAVILVVNKWDLVEKDTHTIYGAEEDLRRSLGFLHH
                     APMIFLSALTGQRVPKLFGMIDTLAEAHGRRIPTGELNRFLRESVAAMSPHAIDGKLP
                     KL"
     gene            1285..1701
                     /locus_tag="VK150_07835"
     CDS             1285..1701
                     /locus_tag="VK150_07835"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HLP31257.1"
                     /translation="MRRPLPLLLIPALTAVAPLPAAPTPKVLSPAGTVARQIELFNAH
                     DLEGFLGLFAEEVEVSVIPGPAAPTGKAKLRELYGARFQANPDLHASATAQMVSGEFV
                     IQKEKLSGRAGKPNLEALVIYQVKAGKIVRMWGVGE"
     gene            complement(1706..>2002)
                     /locus_tag="VK150_07840"
     CDS             complement(1706..>2002)
                     /locus_tag="VK150_07840"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HLP31258.1"
                     /translation="PLFAALGDATRLGLLVSLCSGGPVSVTRLSATFEVSRQAITKHL
                     EVLAEAGLVRSSRQGRERIWTFEPKRLDDAHHYLERLSRQWDDALGRLKAFVER"
BASE COUNT          287 a          642 c          750 g          323 t
ORIGIN      
        1 agagcttggg cagcttgccg tcgatggcgt gggggctcat ggcggcaacg gattcgcgga
       61 ggaagcggtt cagctcgccc gtggggatgc ggcggccgtg ggcctcggcc agggtgtcga
      121 tcatgccgaa cagcttgggt acccgctgcc cggtcaaggc cgagaggaag atcatgggcg
      181 cgtggtgcag gaagcccagg ctgcggcgca gatcttcttc agccccgtag atggtgtgcg
      241 tgtccttctc gaccagatcc cacttgttca ccacgaggat cacggccgcg ccggcctcct
      301 gggcgtagcc ggcgatgacc gcgtcctggt gggtggcacc ctccacggca tcgagcagga
      361 gcaggctcac gtcggcccgg gccatggcct gcttggcctt caggatgctg agcttctccg
      421 cgccttcgtg ggtcttgccc ttcttgcgga tgccggcggt gtcgatcatc cggtagaccc
      481 ggtccttcac gtggaagacc gtgtccaccg tgtcgcgggt ggtgccggcg acctcgctga
      541 cgaggctgcg ttcgtagccc agcaggcggt tcgtcagcga cgacttgccg acgttgggcc
      601 ggccgatgag ggcgaagcgc aattcgtcgg acagagagtg gatggtcgcc tcttccggcg
      661 tgcgatggaa gggcaggcgg gcgcggaggg cctcgatgag ctcgggcacg ccggcgccgt
      721 gcgccgcgga gatggccagc acctggtcga agcccaggcc gtagaagccg gcgtccggcg
      781 cgccgccctt catgccgtcg agcttgttga tgacaaggag gatgggcttg ccctggcgcc
      841 gaagccgggc ggcgatctcc tcgtcgccgg cggtgaggcc gtcgtggccg tccaccagga
      901 ggatggcgac atgggcctcg cccagggccg cttcggccat gcgggtgatg ccttgggtga
      961 tgacgtcgtc gccctcgaaa tcgaggccgc cggtgtccac cagctcgaag acctcttcag
     1021 cgccgccgtc ctcgccgagg caggtgacgc ggccgtagct gcggtcccgg gtcatgcccg
     1081 gcaggtcgtg gaccagggcc gcccggcttc gggtgagccg gttgaagagg gtggacttgc
     1141 ccacgttcgg gcgtccgcaa agggcgacga gcggcagttt catatgcgtt ccaagccttt
     1201 cagtctatcg cccataggcc gaaagggcac ggacggattt cggaaggggt gggtacagtg
     1261 gatctcaccc cgcctggagc cgccatgcgc cgcccgcttc ccctcctgct gattcccgcg
     1321 ctcacggccg tcgcgcccct gccggcggcg ccgacgccca aggtgctcag cccggctggc
     1381 actgtggcgc ggcagatcga gctgttcaac gcccacgacc tcgaggggtt cctcgggctg
     1441 ttcgccgagg aggtcgaagt gtcggtcatc cccggcccgg cggcgcccac gggcaaggcg
     1501 aagctgcggg agctctacgg ggcgcggttc caggcgaacc ccgacctcca tgcctcggcc
     1561 acggcccaga tggtctcggg cgagttcgtg atccagaagg agaagctctc gggccgcgcg
     1621 ggaaagccca acctggaggc gctggtgatc taccaggtga aggccgggaa gatcgtgcgg
     1681 atgtggggcg tgggggagta gggcctcagc gctccacgaa ggccttgagc cgcccgaggg
     1741 cgtcgtccca ctggcgggag aggcgttcca ggtagtggtg ggcatcgtcg aggcgcttgg
     1801 gctcgaaggt ccagatgcgt tcccggccct ggcggctgct ccggaccagg cctgcctcgg
     1861 ccagcacctc caggtgcttg gtgatggcct ggcgggacac ctcgaaggtg gcgctcaggc
     1921 gcgtgaccga gacgggcccg cccgagcaga ggctcaccag caggccgagc cgggtggcgt
     1981 cgccgagggc cgcgaagagg gg
//
LOCUS       DATGWW010000541         2011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_265451, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000541 DATGWW010000000
VERSION     DATGWW010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265451"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..716)
                     /gene="rfaD"
                     /locus_tag="VK150_07845"
     CDS             complement(<1..716)
                     /gene="rfaD"
                     /locus_tag="VK150_07845"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR02197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HLP31259.1"
                     /translation="MFIVTGGAGFVGSNLVRELNRRGHTDILVVDNLSRSDKFRNLAD
                     LTLADYMDKREFRARLDAGTLDLAPEAVFHNGACSDTMEADGRYMMENNYGDSKALLH
                     WCLARKAPLVYASSAATYGASPDFEPVPANERPLNVYGYSKLAFDQHVRSLLPAIQSP
                     VVGLRYFNVFGPREAHKGRMMSVLHQLLSQLVATGACRLFEGTDGYENGGQRRDFIYV
                     GDVVAINLHFGGAGMAKGIV"
     gene            complement(748..1698)
                     /locus_tag="VK150_07850"
     CDS             complement(748..1698)
                     /locus_tag="VK150_07850"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HLP31260.1"
                     /translation="MPESRASHLVAVLSLAGIALVWAGGFPATKYCLQAGLSVGAILA
                     IRFAIGTVGLGLMLLLLRIPIRRRDALDGLWLGLVLATLFWLQTDGLRFTTTSKSGFI
                     TGLYVIFTPMVALLAGDRLRPSHGLGALVALAGLALLVREPGSAWGGWNRGDSETFLA
                     AILCGFHIVMTAHYSRRSSGWVLAFMQVAVTGAVSLAITLALPAPYGFQNVGPALAKG
                     GTWVALGFMGLLATTLAFYVQSTFQARLGATESAVIFSSEPVWTACIAISGLVPGIRE
                     HLSPLQLTGGGLILSATLVAELAPRLLRKVTPIEAEDTIG"
     gene            complement(1764..>2011)
                     /locus_tag="VK150_07855"
     CDS             complement(1764..>2011)
                     /locus_tag="VK150_07855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31261.1"
                     /translation="KELRQKLSLKQAEGKAFRVTGSRPTLQGMRVEGLNQKGPALELT
                     VVLPASLKAGRYSEVLALTTDDPDQPELTIRVVALLK"
BASE COUNT          324 a          654 c          737 g          296 t
ORIGIN      
        1 ttgacgatgc ccttggccat gcccgcgccg ccgaagtgga ggttgatggc cacgacgtcg
       61 ccgacgtaga tgaagtcgcg ccgctggccg ccgttttcgt agccgtcagt gccctcgaac
      121 aggcggcagg cgccggtcgc caccagctgg ctcagcagct ggtgcagcac ggacatcatg
      181 cggcccttgt gggcctcgcg cggcccgaag acgttgaagt agcgcaggcc caccacggga
      241 ctctggatgg ccggcaggag gctgcgcaca tgctgatcga aggccagctt cgagtagccg
      301 tagacgttga gagggcgctc gttggcaggc accggctcga agtcggggct ggcgccatag
      361 gtggcggcgc tgctggcgta gaccaggggc gccttgcggg ccaggcacca gtggagcagg
      421 gccttggaat ccccgtagtt gttctccatc atgtagcgcc cgtcggcctc catggtgtcg
      481 gagcaggccc cgttgtggaa cacggcctcg ggggcgagat ccagcgttcc tgcgtccagg
      541 cgggcgcgga actcgcgctt gtccatgtag tcggccaggg tgaggtccgc gaggttccgg
      601 aacttgtcgc tgcggctgag gttgtcgacc accaggatgt ccgtgtggcc tcgccggttc
      661 agctcccgca ccaggttgct gcccacgaat cccgcgccgc ctgtgacgat gaacatgccg
      721 actcctcgat cccctccaga atacctttta tccgatggtg tcttccgcct cgatgggcgt
      781 cactttccgc agcagccggg gcgccagctc ggccacgagg gtggcggaga ggatgaggcc
      841 tcccccggtg agctggaggg ggctgaggtg ctcgcggatg ccgggcacca gaccgctgat
      901 ggcaatgcag gcggtccaca ccggttccga ggagaagatg acggcgcttt ccgtggcgcc
      961 gaggcgggcc tggaaggtgc tctgcacgta gaaggccagg gtggtcgcca gcaggcccat
     1021 gaagcccagg gccacccagg tgccgccctt cgcgagggcc gggcccacgt tctggaagcc
     1081 gtacggggcg ggcagggcga gggtgatcgc cagggacacg gcgccggtca ccgccacctg
     1141 catgaaggcc agcacccagc ccgaggaccg gcgggagtag tgcgcggtca tgacgatgtg
     1201 gaagccgcag aggatggccg ccaggaaggt ttccgaatcg ccgcggttcc agccgcccca
     1261 ggcgctgccg ggctcccgca ccagcagagc cagccccgcg agcgccacca gggcgccgag
     1321 gccatgggag ggccgcaggc gatcccccgc cagcaaggcc accatgggcg tgaagatcac
     1381 gtagagcccg gtgatgaagc cggatttcga cgtggtggtg aagcgcaggc cgtcggtctg
     1441 cagccagaac agcgtggcca gcaccaggcc cagccagaga ccgtccaggg cgtctcgacg
     1501 gcggatggga atccgcagga ggaggagcat gaggcccagg cccacggtgc cgatggcgaa
     1561 gcggatggcg aggatggcgc cgacggagag gcccgcctgc aggcagtact tggtggcggg
     1621 gaagcccccg gcccagacca gggcgatgcc ggccagcgag aggacggcga cgaggtggga
     1681 ggcgcgggac tccggcatcc ctccaggcta tcgccggggt ggcgccgatc tgagcggaac
     1741 ttgcgccggc cggggattcc gggctatttc agcagcgcca ccacacgaat cgtcaactcc
     1801 ggctgatccg ggtcgtccgt ggtcagggcg agcacttcgc tgtagcggcc ggccttcagg
     1861 ctggcgggca gcaccacggt cagctccagg gcggggccct tctggttcag gccctcgacc
     1921 cgcatcccct gcagggtggg gcggctgccc gtcacgcgga acgccttgcc ctccgcctgc
     1981 ttgaggctca atttctgccg cagctccttg c
//
LOCUS       DATGWW010000542         3305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_116609, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000542 DATGWW010000000
VERSION     DATGWW010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3305
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116609"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..703
                     /locus_tag="VK150_07860"
     CDS             <1..703
                     /locus_tag="VK150_07860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31262.1"
                     /translation="RHWDWDPALILFQQVVPALSSDWHEPPIDLNSQGMPEGVLSLAG
                     LRQTFAEAVSDLRREPLGPVAARVAETFEWLPLRAVVFHDDAQLPLDFEGTGPCGRVS
                     LWLGIHRDRPVVIERQSPAPANRPWSAVVGERIQPETFLVAAGLDPEPPKGFDSALQS
                     ALTHVCRWMEAPLDAYRRTYPVGISWHHGRRERLLGRTIVDVRPGDPPMLVLDDGTEL
                     AINHDPVAAPEDRGI"
     gene            complement(700..1140)
                     /locus_tag="VK150_07865"
     CDS             complement(700..1140)
                     /locus_tag="VK150_07865"
                     /inference="COORDINATES: protein motif:HMM:NF012601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deaminase"
                     /protein_id="HLP31263.1"
                     /translation="MPRAQLKDEVFMNMALELSRLGTCCRLKVGAVLLRADGGIAAAG
                     FNGALPGMPHCTPDTCKPGQRCLHTSHAEENALGFCDGPVATAYVTHEPCLTCCRALV
                     RRGVRRVVFHHPYTSIADQERAERQAILDHFGVRWESIGSPETA"
     gene            1302..2366
                     /locus_tag="VK150_07870"
     CDS             1302..2366
                     /locus_tag="VK150_07870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31264.1"
                     /translation="MNTPSLILIAMLGLGFSSPGHAQGWDPARKATGWAYQEVDGSLV
                     FFDSEAGAFRTWVKGTGLTSSLSIALPPARRAAASAKPAPAVPRGATDYDAAAALLYG
                     TPRRPRPQAAARESAPVESPSAETTPDRWVTDSYSRTWVTTSERLIVLGKDGKPDLQL
                     TLPGPVEDLAVAPDGLLLLYRTLKPYLEKRDLRTGAVLWSFGEGSQLKEPDASPLRVP
                     LNRMALGADGTVYLAEGASLTFTVLDPARGPKAPGQAFFTCQDALPSRASLGHVGRGP
                     LLAWADRGVVFGVFTPSQVKSCGAPESRGLLLARFDLGRGTLDWLTTGLAEGHRLVGL
                     LDTEAVFLAPGGGLAFTPIR"
     gene            complement(2386..2461)
                     /locus_tag="VK150_07875"
     tRNA            complement(2386..2461)
                     /locus_tag="VK150_07875"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2426..2428),aa:Arg,seq:cct)
     gene            2634..>3305
                     /locus_tag="VK150_07880"
     CDS             2634..>3305
                     /locus_tag="VK150_07880"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP31265.1"
                     /translation="MEPTRVLVVEDDPINLDALVENLQFEGYETVGVSSGTEAWQAIS
                     SHSDPFDVILLDRVMPDMDGIEILRRLQARPASARASVIMQTSLSGDSDIVEGLRAGA
                     YYYLTKPFTSQALLAIVGAAARDRLGYRKLQLDAQQAARALACLTQAQFDFRTPEQAF
                     DLATLIAKATPRPERTVGGLSELMLNAIEHGNLGITYAGKSKLLAEDRWKEEIDQRLS
                     LPEHAS"
BASE COUNT          470 a         1253 c         1090 g          492 t
ORIGIN      
        1 ccgccactgg gactgggacc cggccctcat cctgttccag caggtggtcc ccgccctgtc
       61 ctcggactgg cacgagccgc ccatcgacct gaacagccag ggcatgcccg agggggtgct
      121 gagcctcgcc ggcctccgcc agaccttcgc cgaggcggtc tcggacctgc gccgcgagcc
      181 ccttgggccc gtggccgccc gggtggccga gaccttcgag tggctgcccc tgcgggcggt
      241 ggtcttccac gacgacgccc agctgcccct cgatttcgag ggcaccgggc cctgcggccg
      301 ggtctccctc tggctcggca tccaccgcga ccggcccgtg gtgatcgaac gccagtcccc
      361 ggccccggcg aaccggccct ggtccgccgt ggtgggcgag cgcatccagc cggaaacctt
      421 cctggtggct gcgggcctcg accctgagcc ccccaagggc ttcgattcag ccctccagtc
      481 cgccctgacc cacgtctgcc gctggatgga agccccgctg gacgcctacc gccgcaccta
      541 tcccgtgggc atctcctggc accatgggcg ccgggagcgg ctgctcgggc gcaccatcgt
      601 ggacgtgcgg cccggggatc cccccatgct cgtgctcgac gacggcacgg agctcgcgat
      661 caaccacgac cccgtggccg cgccggagga ccggggtatc taggctgtct cgggcgatcc
      721 gatcgactcc cagcgcacgc caaagtggtc gaggatggcc tgtcgctccg cccgctcctg
      781 gtccgcgatg ctggtgtagg ggtggtggaa gaccacccgg cgcacaccgc gccgcaccag
      841 cgcgcggcag caggtgaggc agggctcgtg ggtgacgtag gcggtggcca cggggccgtc
      901 gcaaaatccc agcgcgttct cttcggcgtg actggtgtgg aggcaacgct gccccggctt
      961 gcaggtgtcc ggcgtgcagt ggggcatgcc cggcagcgcc ccgttgaacc ccgcggcggc
     1021 aatgccgccg tccgcccgca gcagcaccgc gcccaccttc aggcggcagc aggtccccag
     1081 gcggctgagc tccagcgcca tgttcatgaa gacttcatcc ttcagctggg cacgcggcat
     1141 gcagatctcc ccccggggtg cccccatcat cgcaagaacc cggcgcggat gcagaactca
     1201 gcggatgcgc gggtccgtgg tccgtgtcgt gccgcaagtc acaggcttgg gcattcaacc
     1261 gaagtcgctc atgcgcataa taaaatataa gcaggtgatg aatgaacacc ccttccctga
     1321 ttctcatcgc gatgctgggc ctgggtttca gctccccggg gcatgcccag ggctgggacc
     1381 ctgcgcgcaa ggccactggc tgggcttatc aggaagtgga cggctccctg gtcttcttcg
     1441 attccgaggc cggcgccttc cgcacctggg tgaagggcac cggcctgacg tcgagccttt
     1501 ccatcgccct gccgcccgcg cggcgggccg cggccagcgc caagccggcc cctgcggtcc
     1561 cccgcggggc cacggattat gatgccgccg ccgcgctgct ctacggcacg ccgcgccgcc
     1621 cgcgccccca ggccgccgcc cgggaatcgg cgccggtcga gtccccgtcc gcggagacga
     1681 cgcccgaccg ctgggtgacg gattcctaca gccggacctg ggtgacgacc tcggagcgcc
     1741 tgatcgtgct gggaaaggac ggcaagcccg acttgcagct caccttgccc ggcccggtgg
     1801 aggacctggc cgtggccccg gacgggctgc tgctcctcta ccgcaccctg aagccctacc
     1861 tggagaagcg ggacctccgg accggcgcgg tcctctggag cttcggcgag gggtcccagc
     1921 tgaaggagcc agacgcctcg cccctccggg tgcccttgaa ccgcatggcc ctgggcgccg
     1981 acggcacggt ctatctcgcc gaaggcgcga gcctgacctt cacggtgctc gacccggccc
     2041 ggggccccaa ggcgcccggc caggccttct tcacctgcca ggacgcgctg ccttcgcggg
     2101 cgtccctggg ccatgtgggc cggggaccgc tgctcgcctg ggcggaccgg ggtgtggtct
     2161 tcggcgtgtt cactccgagc caggtcaaat cctgcggcgc gcctgaatca cggggcctgc
     2221 tcctcgcccg tttcgacctg ggcaggggca ccctcgactg gctgaccacg ggcctggccg
     2281 aggggcaccg gctggtgggc ctgctcgaca ccgaggcggt gttcctcgcg cccggcggag
     2341 gcctggcctt cacgcccatc cgctgaaggc gcaccccaca gctgctggtg gtcccggcgg
     2401 gaattgaacc cacgacctac cgcttaggag gcggtcgctc tatccgctga gctacgggac
     2461 ccacgcgcgg cagtccccat agtagcgtca gacgcccgtc tcagacgagc gcccaggcgc
     2521 cctccaggcc ggtcgtcccc gtcaatcctc agcacccacg cgggccctgc cgaggagggt
     2581 ccagggcccg ctccgtcact ccgggccttg ccccgcccca gccggacatc gccatggaac
     2641 ccacccgcgt gctggtcgtc gaggacgacc cgatcaacct cgacgccctg gtcgagaacc
     2701 tgcaattcga gggctacgag accgtgggtg tctcgagcgg cacggaagcc tggcaggcca
     2761 tttccagcca ttccgacccc ttcgacgtca tcctcctcga ccgcgtgatg cccgacatgg
     2821 acggcatcga gatcctgcgg cgcctccagg cgcggcctgc ctccgcccgc gcctccgtga
     2881 tcatgcagac ctcgctgtcg ggcgattccg acatcgtgga aggcctgcgg gccggggcct
     2941 actactacct gacgaagccc ttcacctccc aggcgctcct ggccatcgtg ggggccgccg
     3001 cccgcgaccg gctgggctac cgcaagctgc agctcgacgc ccagcaagcg gccagggcct
     3061 tggcctgcct cacacaggcc cagttcgact tccgcacgcc ggaacaggcc ttcgacctgg
     3121 cgacgctcat cgcgaaggcg acgcccaggc ccgagcgcac cgtcggcggg ctttccgagc
     3181 tgatgctcaa cgccatcgag cacggcaacc tcggcatcac ctacgccggc aagtcgaagc
     3241 tgctcgcgga ggaccgctgg aaggaggaga tcgatcagcg gctcagcctg cccgagcatg
     3301 cctcg
//
LOCUS       DATGWW010000543         2873 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_40575, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000543 DATGWW010000000
VERSION     DATGWW010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2873
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40575"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..448)
                     /locus_tag="VK150_07885"
     CDS             complement(<1..448)
                     /locus_tag="VK150_07885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31266.1"
                     /translation="MRPAALCLLAFPLLAQGLDEAAFRGDPRRLSAACADRARLLKPK
                     DARMLAEYGRAFLAAGERSKAEECFQLARIESPKDADIHRLIAAAWLRSGQRVEAMRA
                     ITDMQAADPKARSAFTRAAVNLQDAGLTKEADALMERAWILDPSEWQ"
     gene            complement(457..1995)
                     /locus_tag="VK150_07890"
     CDS             complement(457..1995)
                     /locus_tag="VK150_07890"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HLP31267.1"
                     /translation="MSLEKKIETLKAKHAQALAGGGEERVRKQHEGGKLTARERVAAF
                     LDEGSFEEMDALMVHRNWGVEKIPGDGVVTGFGRVDGRPVAVFAQDFTVFGGSLSEAY
                     AKKICKVMDLAMKVGCPVIGLNDSGGARIQEGVVSLGGYADIFLRNTLASGVIPQISL
                     IMGPCAGGAVYSPAITDFITMVKGTSYMFVTGPDVIKAVTHEEVTKEELGGAHTHSAK
                     SGVAHFVCASDLAALAHTRELLSFLPSNNLGEAPRRAPKAQMPLENPELDTIVPDDPG
                     KPYDIRDIIRGVVDDANFFEVHEAFAPNLVVGFARIEGRSVGIVANQPAFYAGVLDIS
                     SSEKGARFVRFCDAFNIPLITFEDVPGFLPGVTQEHGGIIRHGAKLLFAFCEATVPKI
                     TIITRKAYGGAYCVMASKHIRTDFNFAYPTAEIAVMGAEGAMNVLHGKSIAIAPDPDA
                     RKAELIAEYNEKFANPYIAAEFGFVDEVILPRETRQKLVKALAFLDTKRDSTPPKKHG
                     NIPL"
     gene            complement(2093..2770)
                     /locus_tag="VK150_07895"
     CDS             complement(2093..2770)
                     /locus_tag="VK150_07895"
                     /inference="COORDINATES: protein motif:HMM:NF025724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4410 domain-containing protein"
                     /protein_id="HLP31268.1"
                     /translation="MLRESALSAMLVACAVAQEATGPAPLAPPPAAAAPAPVATPKPA
                     APKPALLDDGLLDPAWFGEGVAFTRGDDVDFFWIKPGLDLSGRVLWMKPWEDPAMLRK
                     GRDGKDNAKATELTDSFPGMLRGALTGAFNGKAKVSRTEGDLTLTGRFVDANAGSKAA
                     KWLIGLGAGSETATWDLKVVDPKTGELLLAVHHRAISGTAMSTIQDKLVKWSDKFATF
                     IASRATK"
BASE COUNT          418 a          920 c         1037 g          498 t
ORIGIN      
        1 cttgccactc ggaaggatcc aggatccagg ctcgctccat gagcgcgtcc gcctccttgg
       61 tgagcccggc gtcctgcagg ttcacggccg cgcgcgtgaa ggcgctcctg gccttgggat
      121 cggcggcctg catgtcggtg atggccctca tggcctccac gcgctggccg gagcgcaacc
      181 aggcggcggc gatgaggcgg tggatgtcgg cgtccttcgg gctctcgatg cgggccagct
      241 ggaagcattc ctccgccttc gaccgctcgc cggccgccag gaaggcccgg ccgtattccg
      301 caagcatcct ggcgtccttc ggcttcagca gccgggcgcg atcggcgcaa gcggcggaga
      361 gcctgcgcgg gtcgccccgg aaggccgcct cgtccagccc ctgggcgagg agggggaagg
      421 ccagcaggca gagggcggct gggcgcatgg gggctcctag agcgggatgt tgccgtgctt
      481 cttggggggt gtgctgtcgc gcttggtgtc aaggaaggcc agggccttca ccagcttctg
      541 tcgggtttcc cggggcagga tcacctcgtc gacgaacccg aactctgccg cgatgtaggg
      601 attggcgaac ttctcgttgt actcggcgat cagttcggcc ttgcgggcgt cggggtccgg
      661 cgcgatggcg atggacttgc cgtgcagcac gttcatggcg ccttcggccc ccatgacggc
      721 gatttcggcc gtggggtagg cgaaattgaa gtcggtgcga atgtgcttgc tggccatcac
      781 gcagtaggcg ccgccgtagg ccttgcgggt gatgatggtg atcttgggca ccgtggcctc
      841 gcagaaggcg aagagcagct tggcaccgtg gcggatgatg ccgccgtgct cctgggtgac
      901 gcccggcagg aagcccggca catcctcaaa ggtgatcagc gggatgttga aggcgtcgca
      961 gaaccgcacg aaccgagcgc ccttctcgct cgaggagatg tcgagcaccc cggcgtagaa
     1021 cgcgggctgg ttggccacga tccccacgct gcgcccctcg atgcgggcga agcccacgac
     1081 gaggttcggc gcgaaggctt cgtggacttc aaagaaattc gcgtcgtcca ccacgccccg
     1141 gatgatgtcg cggatgtcgt agggtttccc gggatcgtca ggaacgatgg tgtcgagctc
     1201 cgggttctcc agcggcatct gggccttcgg tgcccggcga ggcgcctcgc ccaggttgtt
     1261 gctgggcagg aaggagagca gctcgcgcgt gtgggccagg gccgccaggt cgctggcgca
     1321 gacgaagtga gccacgccgc tcttggccga gtgcgtgtgg gcgccgccca gttcctcttt
     1381 cgtcacctcc tcgtgggtga cggccttgat gacgtccggc cccgtcacga acatgtagct
     1441 cgtgcccttg accatggtga tgaagtcggt gatggcgggg ctgtagacgg cacctccagc
     1501 acacggcccc atgatgaggc tgatctgggg gatgacgccg ctggccaggg tgttgcgcag
     1561 aaagatgtcg gcgtagccgc ccagactcac cacgccctcc tggatgcgcg cgccgccgct
     1621 gtcgttgagg ccgatgaccg ggcagcccac cttcatggcc aggtccatga ccttgcagat
     1681 cttcttggcg taggcctcgg acagcgagcc gccgaagacg gtgaaatcct gggcgaagac
     1741 ggccaccggg cggccgtcca cgcggccgaa gccggtgacc acgccatccc ccgggatctt
     1801 ctccacgccc cagttgcggt gcaccatcag ggcgtccatc tcctcgaagg agccctcgtc
     1861 gaggaacgcg gccacccgct cacgggccgt gagtttccct ccctcgtgct gcttgcggac
     1921 ccgctcctcg ccgcctccgg caagcgcctg ggcgtgcttg gctttgaggg tctcgatctt
     1981 cttctcgagg gacatggagg ctcccggtgc ggaaaactgg cggccgatct gtggggatca
     2041 gccgccagca tagcgcggag cgcgccggcc aggcatgtcc tcccggctgg cgctacttcg
     2101 tggcgcggga ggcgatgaag gtggcgaact tgtcagacca cttcacgagc ttgtcctgga
     2161 tggtgctcat ggcggtgccg ctgatggccc ggtggtggac agccaggaga agctcgccgg
     2221 tcttcggatc cacgaccttc agatcccacg tggccgtttc gctgccggcg cccagcccga
     2281 tgagccactt ggcggccttg ctgcccgcgt tggcgtccac gaagcggccg gtgagggtaa
     2341 ggtcgccctc ggtgcggctc accttggcct tgccattgaa agcgccggtg agggcgccgc
     2401 gcagcatgcc ggggaagctg tcggtcagtt cagtggcctt ggcgttgtcc ttgccgtccc
     2461 gtcccttgcg gagcatggcg gggtcctccc agggcttcat ccagaggacc cggcccgaga
     2521 ggtcgaggcc cggcttgatc cagaagaaat ccacgtcgtc gccccgggtg aaggcgacgc
     2581 cctcgccgaa ccaggcggga tccaggaggc cgtcgtccag gagcgcgggc ttgggtgctg
     2641 cgggcttcgg cgtcgcgacc ggcgcgggag cggcggccgc tggcggcggg gcaagagggg
     2701 cgggtccagt ggcctcctgt gcaacggcgc aggcgacgag catggcggaa agggctgatt
     2761 cgcgaagcat gggtctcctg gggggaattc cacacgctag accgcccggc agaccacgtc
     2821 aatgccgtgg cctgtcgggc ggctccgcgc tctggtgagg ggctaccgca tgg
//
LOCUS       DATGWW010000544         1880 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_40613, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000544 DATGWW010000000
VERSION     DATGWW010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1880
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40613"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..1162)
                     /gene="mraY"
                     /locus_tag="VK150_07900"
     CDS             complement(74..1162)
                     /gene="mraY"
                     /locus_tag="VK150_07900"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HLP31269.1"
                     /translation="MLPWLLYPFRDVVPGISVFRYVTFRTAMAAATAMVLSLLLGPWV
                     IRTLTALKMGQHIRDVGPEHHQKKAGTPTMGGILVLVVITVSTVLWCDLKSGAIWVAL
                     MALLGFGTVGAFDDAQKLLKKQNLGLTSWQKMALLTGISLFVAWLILHFGLRGTATSQ
                     LSVPFFKNFRPDIGLFLIPWIWLVMVGTSNAVNLTDGLDGLAIGGTLIVSLTYAILAY
                     SVGHAKIAAYLVVPHVPGGAELSVFMGAMAGACLGFLWFNAHPAEVFMGDTGSLGLGG
                     ALGTVAVMIKQEVLLVIAGGLFVVEAVSVILQVGSFKLRGGKRIFRMAPFHHHLELGG
                     LQETKVVIRMWITAIVCSILALSSLKLR"
     gene            complement(1189..>1880)
                     /locus_tag="VK150_07905"
     CDS             complement(1189..>1880)
                     /locus_tag="VK150_07905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31270.1"
                     /translation="WCRWISEQPWARHAVALPVGEGEAFGWEDIRSLGAAGSAFRLRT
                     PGGGFDLRIQLPGDHQVRNAALAAALALHLGFDAGRVAAGLASVAPEPGRGRLHALAG
                     GGCLLDETYNASADSIQACAQALLHLPGGEAVAILGCMRELGGDAARIHRDTAAALKR
                     LGLSRLFAYGDFAESYAEGFGAGAVAFPDFETLRDDPSGLSAIPPGARILVKGSRFWR
                     AERAVDWLLAR"
BASE COUNT          323 a          645 c          669 g          243 t
ORIGIN      
        1 ggggtcaggg cttcatcctg ggccagccct ggcccacggg ccccaagccc ctcgcggtgg
       61 tgccggagct gacctagcgc agcttcagcg aactcagggc caggatcgag cagacgatcg
      121 ccgtgatcca catgcggatg acgaccttgg tctcctgcag gccgcccagc tccaggtgat
      181 ggtggaacgg cgccatccgg aagatgcgct tgcccccgcg cagcttgaag ctgcccacct
      241 gcaggatgac gctgaccgcc tccaccacga agaggccccc ggcgatgacc agcagcacct
      301 cctgcttgat catcacggcc acggtgccca gcgcgccacc caggcccagg gagcccgtgt
      361 cgcccatgaa tacctccgcg ggatgggcgt tgaaccagag gaacccgagg caggccccgg
      421 ccatggcgcc catgaagaca gagagctctg cgccgccggg cacgtggggc accaccaggt
      481 aagcggcgat cttcgcgtgg cccacgctgt aggcgaggat cgcgtaggtg agcgacacga
      541 tcagcgtgcc gccgatggcg aggccgtcga ggccgtccgt gaggttcacg gcgttgctcg
      601 tgcccaccat caccagccag atccagggaa tgaggaacag gccgatgtcg gggcggaagt
      661 tcttgaagaa aggcacggag agctgactgg tggcggtccc ccgcaggccg aagtggagga
      721 tgagccaggc cacgaaaagc gagatgcccg tgaggagggc catcttctgc cagctcgtga
      781 gcccaaggtt ctgcttcttc agcagcttct gcgcgtcgtc gaacgcgccc accgtgccga
      841 agcccagcag ggccatgagc gccacccaga tcgcgccgct cttgaggtcg caccagagca
      901 ccgtggacac ggtgatcacc accagcacca ggatgccgcc catggtcggg gtgcccgcct
      961 tcttctggtg gtgctcgggc cccacgtcgc ggatgtgctg gcccatcttg agggccgtca
     1021 gcgtgcggat cacccagggg cccagcagca ggctgagcac catggcggtc gcggcggcca
     1081 tggccgtgcg gaaggtgaca tagcggaaga ccgagatacc cggcaccacg tcgcggaagg
     1141 gatagagcag ccaggggagc atgggtgtct cgaatcagga atcaggggtc agcgggccag
     1201 gagccagtcc accgcgcgct cggcacgcca gaaccggctt cccttcacca ggatacgggc
     1261 tccgggcgga attgcggaaa gtcccgacgg gtcatcgcgc agggtctcga aatccgggaa
     1321 ggccaccgcg cccgcgccga acccttcggc gtagctctcg gcgaaatcgc cgtaggcgaa
     1381 gagccgggaa aggcccaggc gtttcagggc cgcggctgtg tcgcggtgga tcctcgccgc
     1441 gtccccgccc agttcccgca tgcagcccag gatcgccacg gcctcgccgc cgggcaggtg
     1501 cagcagggcc tgggcgcagg cctggatgga atccgcgctg gcgttgtagg tctcatccag
     1561 gaggcagccg cccccggcca gggcgtgcag gcggccgcgg ccgggctcgg gcgcgacgga
     1621 ggccagaccc gcagcgacgc gcccggcgtc gaagccgagg tggagggcca gggccgcggc
     1681 cagggcggcg ttgcgcacct ggtggtcgcc cggcagctgg atgcgtaggt cgaagccgcc
     1741 acccggcgtg cgcaggcgga aggccgagcc ggccgcgccc aggctgcgga tgtcctccca
     1801 gccgaaggcc tcgccttcgc ccacgggcag ggccaccgcg tgccgcgccc agggctgctc
     1861 gctgatccag cggcaccagg
//
LOCUS       DATGWW010000545         2316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_450432, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000545 DATGWW010000000
VERSION     DATGWW010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_450432"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /locus_tag="VK150_07910"
     CDS             <1..631
                     /locus_tag="VK150_07910"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HLP31271.1"
                     /translation="WHAALHHTSAANATLLVTLAPIWVAVVSVLWLGVRLRRRFWAGV
                     LLALAGALVLGLAKGARWGTGLGELLGALASLAYGAFTLALGRARRDLSAPEALFWVV
                     VCCAVLFGALGWVRGETFTGYPARAWWALLGLGVVVQVAAWWLITWGMGHVPTNLGAM
                     GLMTQPVATVILGWILLGETVRPVQGLGTLLVLAGVALCAFTPPAATPE"
     gene            complement(618..1913)
                     /locus_tag="VK150_07915"
     CDS             complement(618..1913)
                     /locus_tag="VK150_07915"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/sulfonate/bicarbonate ABC transporter
                     ATP-binding protein"
                     /protein_id="HLP31272.1"
                     /translation="MRPSNGLPICELRGVQMRFTGPKGKVQRVLEDIRLDVRPEEILS
                     LIGPNGSGKSTLLRILCGLLEPTQGEVRHHGERLEGLNPGVAMVFQSFALYPWMTVEE
                     NVRIVVRARDLPEHEVRERAHQAIRKVGLEGFEEAFPRELSRGTKQRVGVARALAVDP
                     EILVMDEPFSQVDALTAEALRAEILDIWADKERNPTAIVMVSQSIREALLMADRVAVL
                     SGSPGTLRTIVDVPLPRPRDSRSPEFMKLVDHIHDIITSAELPDVLVTTPVATSAQEG
                     QVEPLPMVQSADILGLLEFLETQGGTSDLFQVASHTHVPFEKVLTTVKAAEMLDLVDT
                     PKRLVLLTPLGKRFVNANMDDRKDLWRAQLLELRLFRVVKEMMDLEEGEVSKEAIVLE
                     LATRLPMEDPEQTFETLVAWGRFGELFAYREERGVLTPE"
     gene            complement(1921..>2316)
                     /locus_tag="VK150_07920"
     CDS             complement(1921..>2316)
                     /locus_tag="VK150_07920"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HLP31273.1"
                     /translation="STQWYLLFNIIAGAQAIPADLREAARAYRLSLWRRCWTLYFPAV
                     FPFLVTGWVTATGGAWNASIVTEVLTAKHETLRTFGLGAEVVMATDQGSMPHLAASAL
                     LMAALVVLFNRLVWGPLYRLAETRYALNR"
BASE COUNT          311 a          769 c          861 g          375 t
ORIGIN      
        1 gtggcacgcc gccctccacc acaccagcgc cgccaacgcc accctgctcg tgaccctggc
       61 ccccatctgg gtggcggtgg tctcggtgct ctggctggga gtccggttgc gccggcgctt
      121 ctgggcgggg gtgctcctgg cgctggccgg ggccctggtg ctgggcctgg ccaagggcgc
      181 ccggtgggga acgggcctcg gtgaactgct cggggccctc gcctccctgg cctacggagc
      241 cttcaccctg gccctgggcc gcgcccggcg cgacctcagc gcccctgagg cgctgttctg
      301 ggtggtggtc tgctgtgcgg tgctcttcgg cgccctgggc tgggtgcggg gcgagacctt
      361 cacgggctac ccggcccgcg cctggtgggc cctcctgggc ctgggggtgg tggtccaggt
      421 cgccgcgtgg tggctcatca cctggggcat gggccacgtg cccaccaacc tgggggccat
      481 gggcctgatg acccagcccg tggccacggt gatcctcggt tggatcctcc tgggagagac
      541 cgtgcggcct gtgcaggggc tcggcacact gctggtgctg gcgggcgtgg ccctctgcgc
      601 cttcaccccg ccggcggcta ctccggagtg aggacgccgc gttcctcgcg gtaggcaaag
      661 agctcgccga agcggcccca cgccacgagg gtttcgaagg tctgttcggg gtcttccatg
      721 ggaaggcggg tggccagttc cagcacgatg gcttctttgg agacttcacc ttcctccaga
      781 tccatcatct ccttcaccac ccggaagagg cggagctcca ggagctgcgc gcgccagagg
      841 tccttgcggt cgtccatgtt ggcgttcacg aagcgcttcc ccagcggggt gagcagcacc
      901 aggcgcttgg gcgtgtccac caggtcgagc atctcggcgg ccttcacggt ggtgagcacc
      961 ttctcgaagg gcacgtgggt gtgcgaggcc acctggaaca gatccgacgt gccgccctgg
     1021 gtctccagga actccaggag gccgaggatg tcggcgctct gcaccatcgg gaggggctcc
     1081 acctggcctt cctgggcgga ggtggccacg ggcgtggtga ccagcacgtc gggcagctcg
     1141 gcgctggtga tgatgtcgtg gatgtggtcc accagtttca tgaactccgg cgaacggctg
     1201 tcgcggggcc ggggcagggg cacgtccacg atggtgcgca gggtgccggg gctgccggac
     1261 agcacggcca cccggtcggc catgagcagg gcctcgcgga tggactggct caccatgacg
     1321 atggccgtgg gattgcgctc cttgtcggcc cagatgtcca ggatctccgc gcggagcgcc
     1381 tcggcggtga gggcgtccac ctggctgaag ggctcgtcca tgacgaggat ctcgggatcc
     1441 accgccagcg cccgggccac gcccacgcgc tgcttggtgc cgcgcgacag ctcccgcggg
     1501 aaggcctcct cgaagccctc gaggcccacc ttgcggatgg cctggtgggc ccgctcgcgg
     1561 acctcgtgct cgggcaggtc ccgggcgcgg accacgatcc ggacgttctc ctccacggtc
     1621 atccaggggt agagcgcgaa gctctggaac accatggcca cgcccggatt caggccctcc
     1681 aggcgttcgc cgtggtggcg gacttcgccc tgggtgggtt cgagcaggcc gcagagaatg
     1741 cgcagcaggg tggacttgcc tgaaccgttg gggccgatga gggagaggat ctcctcgggg
     1801 cgcacgtcga ggcggatgtc ttccagcacg cgctgcacct tgcccttggg gccggtgaag
     1861 cgcatctgga cgccgcgcag ttcgcagatg ggaagcccat tggacggtcg catgtccacc
     1921 tcagcggttc agagcgtagc gggtttccgc caggcggtag agggggcccc agacgaggcg
     1981 gttgaacagc acgacgaggg cggccatgag gagggcgctg gccgccaggt gtggcatgga
     2041 gccctggtcc gtggccatga ccacctcggc gccgaggccg aaggtgcgca gggtctcgtg
     2101 cttcgccgtg agcacctcgg tgacgatgct cgcgttccag gcgccgccgg tggccgtgac
     2161 ccagccggtc accaggaagg ggaacaccgc cgggaagtac agcgtccagc agcgccgcca
     2221 cagcgacagc cggtaggccc gggccgcctc ccgcagatcg gcggggatgg cctgggcgcc
     2281 cgcgatgatg ttgaacagca ggtaccactg ggtgga
//
LOCUS       DATGWW010000546         1988 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_155583, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000546 DATGWW010000000
VERSION     DATGWW010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1988
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155583"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..403
                     /locus_tag="VK150_07925"
     CDS             <1..403
                     /locus_tag="VK150_07925"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP31274.1"
                     /translation="PGQPVPAPAEHGTPPSLVGCRILVVEDDAVLSDVLVELFTLRGA
                     RVTVAVDGAEGWRKLREAAFDLVVCDQQMPHMTGMELLAELRKVDRELPVVLVSGHGL
                     EGMDEGRDPRTRALAKPFGIDRLLDLIADVL"
     gene            472..>1988
                     /locus_tag="VK150_07930"
     CDS             472..>1988
                     /locus_tag="VK150_07930"
                     /inference="COORDINATES: protein motif:HMM:NF044849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLP31275.1"
                     /translation="MRYLLSNLPLNLGEEALDLAKPLAHALGGTPREYRAVILERRSL
                     DARHKGAIRFLAALSFDTDRPLVSGALPGGLKLEPAPTPAPYAVAPPPRRPRVVVVGS
                     GPAGTFCALRLLDYGIEPVVLERGPAMGERVQAIAGLWKDAVLDPEANAQFGEGGAGT
                     FSDGKLTTRIGHPATRYVLEAFVRFGANPRILYLAKPHVGTDVIRRCAVLIRKEAQHR
                     GAEYRFRARLADVRFDEAGRVRAAVLASGEEIPCEALVLAPGHSARDTFEMLHGHGVA
                     MRQKPFAMGVRVEHPQDLIDRSQYGPSAGHPSLPAADYKLVCNFGLNRAAYSFCMCPG
                     GEVIQCSSEAGGVVVNGMSNEKRDSGFANSGLVAKVNTADFGSDHLLGGMYFQRKWEQ
                     AAFRAAGETYGAPAMSVQDFLRERPTGHLPRTSFKPFAVAADLRTCLPDFVREQLAGA
                     LPAFDRKIHGFASREAVLLAIESRTSSPIQLLRGEDGQSLSHPGLYPCGEGAGFAG"
BASE COUNT          269 a          716 c          709 g          294 t
ORIGIN      
        1 cccgggccag ccggtgccgg cgccggcgga acacgggacg ccgccctccc tcgtgggctg
       61 ccgcatcctc gtggtggagg acgatgcggt gctcagcgac gtgctggtgg aactgttcac
      121 cctgcgcgga gcccgggtca ccgtggccgt ggacggcgcg gagggctggc ggaaactgcg
      181 ggaggcggcg ttcgacctgg tggtctgcga ccagcagatg ccccacatga ccggcatgga
      241 gctgctcgcc gagctgcgga aggtggaccg cgagctgccc gtggtcctgg tgtcggggca
      301 cggcctcgaa ggcatggatg agggccggga tccccgcacc cgggcgcttg ccaagccctt
      361 cggcatcgac cgcctgctgg acctgatcgc cgacgtgctc tgaccctggg tgctgtcggc
      421 tatcatcgga ccaggccttg ggtcccgtgg accccctccg ccgaggtgtt catgcgctac
      481 ctcctttcga acctgccctt gaacctgggt gaggaggcgt tggacctggc gaagcccctg
      541 gcccacgcct tgggcggcac gccgcgggag taccgagccg tcatcctcga gcgccgcagc
      601 ctggacgccc ggcacaaggg cgccatccgg tttctcgcgg ccctcagctt cgacaccgat
      661 cggcctctgg tttcgggggc gctgcccggc gggctgaagc tggagccggc cccgaccccc
      721 gcgccctacg ccgtggcgcc gcccccgcgc cgcccccggg tggtggtggt gggcagcggg
      781 ccggcaggca ccttctgtgc cctgcggctg ctggactacg gcatcgagcc cgtggtgctc
      841 gagcgcgggc ccgccatggg cgagcgggtg caggccatcg cgggcctgtg gaaggacgcg
      901 gtgctggatc ccgaggccaa cgcccagttc ggcgaaggcg gcgccggcac cttcagcgac
      961 ggcaagctca ccacgcgcat cggccacccc gccacccgct acgtgctgga agccttcgtg
     1021 cgcttcggcg cgaacccccg gatcctctac ctcgccaagc cccacgtggg cacggacgtc
     1081 atccgccgct gcgcggtgct gatccgcaag gaggcccaac accggggcgc cgagtaccgg
     1141 ttccgggcgc ggctggcgga tgtgcgcttc gacgaagcgg gtcgtgtccg cgcggcggtg
     1201 ctggccagcg gcgaggagat cccctgcgag gccctggtgc tggccccggg ccacagcgcc
     1261 cgcgacacct tcgagatgct gcacggccac ggcgtcgcca tgcgccagaa acccttcgcc
     1321 atgggtgtgc gcgtggagca tccccaggat ctcatcgacc gctcccagta cgggcccagc
     1381 gcgggccatc cgtcgctgcc cgccgcggac tacaagctgg tgtgcaactt cggcctgaac
     1441 cgcgcggcct acagcttctg catgtgcccg ggcggcgagg tcatccagtg cagcagcgag
     1501 gcgggcggcg tcgtggtgaa cggcatgagc aacgagaagc gcgactcggg cttcgccaat
     1561 tcggggctgg tggccaaggt gaacacggcg gatttcggca gcgaccacct gctgggcggc
     1621 atgtatttcc agcggaagtg ggaacaggcc gcgttccgcg ccgccggcga gacctacggc
     1681 gcgccggcca tgtcggtgca ggatttcctc cgggaacggc ccaccggcca cctgccacgc
     1741 acgagcttca agcccttcgc cgtggcggcg gacctgcgca cctgcctgcc tgatttcgtc
     1801 cgcgagcagt tggccggggc gcttccggcc ttcgaccgga agatccacgg cttcgcaagc
     1861 cgcgaggccg tcctgctggc catcgagagc cgcaccagca gtcccatcca gctgcttcgc
     1921 ggggaagacg gccagtccct gtcccacccg ggcctctatc cctgcgggga aggcgcgggc
     1981 ttcgctgg
//
LOCUS       DATGWW010000547         2412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_450711, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000547 DATGWW010000000
VERSION     DATGWW010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_450711"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..480)
                     /gene="sbcD"
                     /locus_tag="VK150_07935"
     CDS             complement(<1..480)
                     /gene="sbcD"
                     /locus_tag="VK150_07935"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcD"
                     /protein_id="HLP31276.1"
                     /translation="MRFLHTSDWHLGKTLCNANLLEDQAHALEQVAAMIRETRAQALV
                     VAGDIYDRAVPPKEAVALLDQTLDRIVRGLKVPVLLIAGNHDSPERLGFASGFLETQG
                     LHVAGPPEPSPQPVCIGSAAFHLLPYADHACIHHSQEMLHPRTIEILGRVARVSNHRD
                     "
     gene            705..1163
                     /locus_tag="VK150_07940"
     CDS             705..1163
                     /locus_tag="VK150_07940"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HLP31277.1"
                     /translation="MITILGEGTQWQGEIQAGPGGLRIEGSVEGTVISEGQVLIAPTG
                     HVKGTIHAKRLTVTGRAEGVFKVGGCLEILGTGWVEGEVELETLVVDEGGTLQGTCSR
                     RVPQKAKEPMPLLPRKDEALVERFPAAPSGTHGSPHDPPPPNRGVGRNRY"
     gene            complement(1176..>2412)
                     /locus_tag="VK150_07945"
     CDS             complement(1176..>2412)
                     /locus_tag="VK150_07945"
                     /inference="COORDINATES: protein motif:HMM:NF024986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HLP31278.1"
                     /translation="NLTGASLTGAQLDGAVLAGTLLVGANLSSVDLSRKNMKGADLSK
                     ADLTHTNLDGANLAGALFSGSKLHETHLGGANLRGARLSGDDLRTANLCGADLSGADL
                     SGADLAGSILSANLHDANLFAANLRGATLDRAVLTGANLSGVDLSGFTLEGMDLNHAV
                     LNNATLTGAKLKGAILRGAQALGADLSGADLGSADLRNSDFSGANFFACNLEGANLRE
                     ANLASLPTESRGEYRTNLSNANLSRANLSSANLYQANLNEANLVNADLTGASLVWADL
                     RGVDLRQTSLKDTDLRQANLDGANLCGADLRETILQDAYLDGANLSGANLSGVNLTGA
                     DLRHTNLIDASLDGADLSSANLVGANMVWANLSGANLGRADLTRAKLSGANLGGADLR
                     EAKLDDANLDATNLTGAKR"
BASE COUNT          336 a          740 c          946 g          390 t
ORIGIN      
        1 gtcacggtgg ttgctgaccc tggctactcg gccaaggatc tcaatcgtcc tgggatgcag
       61 catctcttgg gaatggtgga tgcaggcatg gtcggcgtag ggcagcaggt ggaaggccgc
      121 ggatccgatg cacaccggct ggggggaggg ctccggcggc ccggccacgt gcaggccctg
      181 ggtctccagg aagccggagg cgaagcccag ccgctcggga ctgtcgtggt tcccggcgat
      241 gagcagcacc ggcaccttca ggccccgcac gatgcggtcc agcgtctgat ccaacaaggc
      301 cacggcctct ttgggaggta cggcgcggtc atagatgtcc cctgccacca cgagggcctg
      361 ggcccgggtc tcccggatca tggccgccac ctgctccagg gcgtgggcct ggtcctccag
      421 gaggttcgca ttgcagaggg tcttgcccag gtgccagtcg gaggtgtgga gaaagcgcat
      481 gggttccctg caatgattgg gcgtagggcg agtatggcat ctaggagtgc acccgcgcgc
      541 cgcgcatctc gcctccggtg ctcaagatca agctcaagtc cgggggccgg tctggccgat
      601 ggaaagaaag cggcccggat cttcgggcgg ccttatgctg caggcgggga cccatgttca
      661 accgaggaac gacctccgga aaggcccgtc tggcgaatga ccccatgatc acgatcctgg
      721 gggagggcac ccagtggcag ggcgaaatcc aggcggggcc gggcggcctg cgcatcgagg
      781 gatcggtgga gggcacggtc atcagcgaag gccaggtgct gatcgccccc acgggccatg
      841 tgaaggggac gatccacgcg aagcggctca cggtgaccgg ccgcgcggag ggagtcttca
      901 aggtgggagg ctgccttgag atcctcggca ccggctgggt ggaaggcgag gtcgagctgg
      961 agaccctggt ggtggatgag ggcggaacgc tgcagggcac ctgctcccgc cgggttcccc
     1021 agaaggccaa ggagcccatg cccctgttgc cccgcaagga cgaggcgctg gtggagcggt
     1081 ttccggcggc gcccagcggc acccacggct cgccccacga cccgccgccc ccgaaccggg
     1141 gcgtgggccg caaccggtat tgatgccggg gttgactagc gcttggcgcc ggtgaggttc
     1201 gtggcgtcga ggttggcgtc gtccagcttg gcttcccgga ggtccgcgcc gcccaggttg
     1261 gcgccgctga gcttcgcccg ggtgaggtcg gcccggccca ggttggcgcc gctgaggttc
     1321 gcccacacca tgttggcccc caccaggttg gcggagctga ggtccgcgcc gtcgaggctg
     1381 gcgtcgatga ggttggtgtg gcgcaggtcg gcgccggtga ggttgacgcc ggagaggttc
     1441 gcgccggaaa ggttcgcgcc gtccaggtag gcgtcctgca ggatggtctc gcgcaggtcg
     1501 gcgccgcaga ggttggcgcc gtccaggttg gcctggcgga ggtccgtgtc cttcagcgag
     1561 gtctgccgca ggtccacgcc gcggaggtcg gcccacacca ggctggcgcc cgtgaggtcg
     1621 gcgttcacca ggttggcctc gttgaggttg gcctggtaca ggttcgcgct ggagaggttc
     1681 gcccggctca ggttggcgtt gctcaggttc gtgcggtact cgccgcggga ctcggtgggc
     1741 agggaggcca ggttcgcctc gcggaggttg gcgccctcga ggttgcaggc gaagaagttc
     1801 gcgccactga aatcggagtt gcgcaggtcg gcgctcccca ggtccgcgcc gctcaggtcc
     1861 gcgcccaggg cctgcgcgcc gcgcaggatg gcgcccttga gcttggcacc cgtcagggtg
     1921 gcgttgttga gcacggcgtg gttgaggtcc atgccttcga gggtgaagcc gctgaggtcc
     1981 acgccggaga ggttggcacc ggtcagcacg gcccggtcga gggtcgcgcc ccgcaggttg
     2041 gccgcgaaga ggttggcgtc gtgcaggttc gcgctgagga tgctgccggc caggtcggca
     2101 ccggagagat ccgcgccgga gaggtccgcg ccgcagaggt tcgcggtgcg caggtcgtcg
     2161 ccgctgaggc gggcgccgcg caggttggcg ccgccgaggt gggtctcgtg cagcttggag
     2221 ccgctgaaga gggcgccggc gaggttggcg ccgtcgaggt tcgtgtgggt gaggtcggcc
     2281 ttggacaggt cggcaccctt catgttcttg cgggagaggt cgacgctgct gaggttcgcg
     2341 cccaccagca gggtgccggc cagcaccgcg ccgtccagct gcgcgccggt gaggctggcg
     2401 ccggtgaggt tc
//
LOCUS       DATGWW010000548         2483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_315501, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000548 DATGWW010000000
VERSION     DATGWW010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_315501"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..451
                     /locus_tag="VK150_07950"
     CDS             <1..451
                     /locus_tag="VK150_07950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31279.1"
                     /translation="VRPSAKKTNFGASYLAHPKFQALMTAFKKGQAYQFDVTDKAKVC
                     TIGTDGSHISFNGRTLFYSRPLNRHEENLLLDRLTAAQFQTTDALVHLVFAVLRSLPE
                     LGPSTLFYMNHQFYLGHETLEAGAAEQGQNLLMGAYRHQKTQDLPRK"
     gene            complement(464..910)
                     /locus_tag="VK150_07955"
     CDS             complement(464..910)
                     /locus_tag="VK150_07955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31280.1"
                     /translation="MDQRVDRGVARAAGLALGAAFLSAVAARVGLWEGHLSLARYAGF
                     VRYTGEVNAFLPRGLHAPLAALATVAETSLGLALVAGFRPRATALGSAALFLLFGTAM
                     ALSQGLKSPLDASVFSAAGGALLLWRHHARLARRVRPEAEPAPPAS"
     gene            complement(931..1386)
                     /locus_tag="VK150_07960"
     CDS             complement(931..1386)
                     /locus_tag="VK150_07960"
                     /inference="COORDINATES: protein motif:HMM:NF024375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HLP31281.1"
                     /translation="MRRVPPTTFVDTRQLDWIPLAEGLSFKPLCFFPDLSGWQLLLRL
                     EPGTVIPRHRHTGEVHAFNLSGTRRLDTGELVGPGMYVHEPAGNEDSWEAVGEEPCVV
                     HIEVNGRNEYRDAEGRLVRIADARAARQDYLDWCRATRTSPIPSLAGTA"
     gene            1529..1924
                     /locus_tag="VK150_07965"
     CDS             1529..1924
                     /locus_tag="VK150_07965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31282.1"
                     /translation="MNLTLKHKAQAILREAGWDLAPPPVIWSPRMARCAGLFVIEKDA
                     RGTWHPEIRLSIPLLRRRDWPWPQQVCGMNCHDPEQVQRRILEHELIHFKLWKDGERD
                     WGHSERFRQLAWEAFGHQAITHGIGTEPD"
     gene            2043..>2483
                     /locus_tag="VK150_07970"
     CDS             2043..>2483
                     /locus_tag="VK150_07970"
                     /inference="COORDINATES: protein motif:HMM:NF017568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase domain-containing protein"
                     /protein_id="HLP31283.1"
                     /translation="MTAWDSAFLASPPLLGEDDRLPPAHKLYALRTLPMGEIKAIGFD
                     MDHTLARYRSPEIDELAFKKAARLLVRERGYSPWLLELGYDPAFAVRGLVLDGLRGNL
                     LKLNRERQVVRACHGSQPMPRPRMDAVYSRRRLSTAAKGFRSIDT"
BASE COUNT          416 a          907 c          838 g          322 t
ORIGIN      
        1 ggtgcggccc agcgccaaga agacgaattt cggcgccagc tacctggcgc accccaagtt
       61 ccaggccctg atgaccgcct tcaagaaggg gcaggcctac cagttcgacg tcacggacaa
      121 ggccaaggtc tgcaccatcg gcacggatgg ctcccacatc tccttcaacg ggaggaccct
      181 cttctactcg cgccccctga accggcacga ggagaacctg ctgctggacc gtctcaccgc
      241 cgcccagttc cagaccaccg acgccctggt gcacctggtc ttcgccgtgc tgcgcagcct
      301 gccggaactc gggccctcca ctctgttcta catgaaccac cagttctacc tcggccacga
      361 gaccctggag gcgggcgccg ccgagcaggg gcagaacctg ctgatgggag cctaccggca
      421 ccagaagacc caggacctgc cccgcaagta ggcggccgcc ggatcaggac gcgggcggcg
      481 caggctcggc ctccggtcga acccgccggg ccagccgggc gtggtggcgc cagagcagca
      541 gcgcaccgcc cgccgcggag aagacagagg cgtccagggg cgacttgagc ccctgggata
      601 aggccatggc cgtgccgaag agcaggaaca gcgccgcgct tccgagggcg gtcgcgcggg
      661 gccggaagcc cgcgaccagg gccaggccca gggaggtctc ggccaccgtc gccagcgccg
      721 cgaggggcgc gtggaggccc cggggcagga aggcgttcac ctcgcccgtg taccggacga
      781 accccgcgta ccgcgccagg ctcaggtgcc cctcccagag cccgacgcgc gccgcgaccg
      841 ccgagaggaa ggccgccccc agggcgaggc cggcggcccg ggccacgccc cggtccacac
      901 gctggtccat gcgatcctga cggccggcca tcacgcggtc cccgcgagcg aggggatcgg
      961 cgaggttctc gtggcccggc accagtccag gtagtcctgg cgcgcggccc gggcatcggc
     1021 gatccgcacg agccggccct cggcatcccg gtactcgttg cggccgttca cctcgatgtg
     1081 gacgacgcag ggctcctccc ccacggcctc ccagctgtcc tcgttccccg ccggctcgtg
     1141 cacatacatg ccgggcccca cgagctcccc cgtatcgagg cgccgcgtgc ccgagaggtt
     1201 gaacgcatgc acctcccccg tgtgccggtg gcggggaatc accgtgcccg gctccaggcg
     1261 cagcagcagc tgccatccgc tcaggtccgg gaagaaacag agcggcttga aggaaagccc
     1321 ctccgcgagg gggatccagt cgagctgacg ggtatccacg aaggtcgtcg gcggaacgcg
     1381 gcgcatgggg gctcctgggc gaagggggac cacgggtccc acccccaaag gttcgagcga
     1441 tggtggacca tcaaaaaggt ccaattttgt catattgaat agaccatcgg gttggccggg
     1501 accccccatc ctgcctcaac atggtcagat gaacctgacc ctcaagcaca aggcccaggc
     1561 catccttcgc gaggcaggct gggatctggc gccgccgcca gtgatctggt cgccgcgcat
     1621 ggcgcggtgc gcggggctgt tcgtcatcga gaaggatgcg cggggcacgt ggcatccgga
     1681 gatccgcctc tccatcccac tgctgcgccg ccgggactgg ccctggccgc agcaggtgtg
     1741 cggaatgaac tgccacgacc ccgagcaggt gcagcggcgc atcctggagc acgagctcat
     1801 ccacttcaag ctctggaagg acggggagcg ggactggggc cacagcgagc ggttccgaca
     1861 gctggcctgg gaggccttcg gacaccaggc gatcacccac ggcatcggca cggaaccgga
     1921 ctgagccgcc tcggcgcgga tggccctgac ccgtctggcg ggcggaaagc atcagaggca
     1981 tgccgtcccg ttccggccag gactgatccg gggcccggaa cctgccgagg tacactccag
     2041 ccatgaccgc ctgggactcc gccttcctcg cctcaccccc gctgctgggg gaggacgacc
     2101 ggctgcctcc cgcccacaag ctctacgccc tgcgcaccct gcccatgggg gagatcaagg
     2161 ccatcggctt cgacatggac cacaccctgg cccggtaccg gtcccccgaa atagacgaac
     2221 tggccttcaa gaaggcggcc cggctgctgg tgcgggagcg cggctactct ccctggctgc
     2281 tggagctcgg ctacgacccg gcattcgcgg tgcgggggct ggtgctggac ggcctgcggg
     2341 gcaacctcct gaagctcaac cgggagcgcc aggtggtgcg cgcctgccac ggcagccagc
     2401 ccatgccgcg gccccgcatg gacgcggtct acagccgccg gcggctgtcc acggcggcca
     2461 agggcttccg cagcatcgac acc
//
LOCUS       DATGWW010000549         4914 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_88882, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000549 DATGWW010000000
VERSION     DATGWW010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4914
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88882"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..2833)
                     /locus_tag="VK150_07975"
     CDS             complement(89..2833)
                     /locus_tag="VK150_07975"
                     /inference="COORDINATES: protein motif:HMM:NF037561.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="binary toxin-like calcium binding
                     domain-containing protein"
                     /protein_id="HLP31284.1"
                     /translation="MNPGIPLRLSLLLALSFALGCGGRSRSAPSATPGGLTVAQVYEK
                     TIASLRAGTPDTDGDGIPDDVERDLLRTDPLKVDSDGDGIFDNVEVFGDMKWGESDAL
                     PDVNGNGVIAALDKDDDGNGINDGELVDSDGDGIPNYLEFYGFTYDALAGKPKLWDGV
                     DHSARYYKTDPNQRSTDQDPFDDRTEVSGTNMDVSVKGPGDLPMVPALPEIVVRMEGY
                     RVTLNDSITVTQGRSVSKGTTWDATTTATHSRTREDNWEVGVEAEVGFEFPGVKASVK
                     AHANYGGLIANTHETSSATSRGGSLVSTEEWSQATTTNPTEAAKIKLFLRVYNQGSAC
                     ASNVVPTLTLRIGGHNVATFKPGENQVNLLEPGGMYPSTPGVCWVVDSNQAGKDIYLT
                     LNELRALECGAPVNITMTQMAADVMRLNPATGAYERMGDWNEYRARCKAVCANLYFDI
                     GDGNFVHSLVYADGRPTAPSVTLGDAFLWGVGGYTHQGLGFTYRDMGGLTKEMKLDDW
                     AICLDGATYTANGLEKGKPLPAGFNLFNLRLNPSSVIVAKVPRDSVDGTPVDGVFVYE
                     PEIYYAYYDSATGSVNAVVDDYNGVAKAEFIDKDGNARLMSVDLAGSDFYVYHPQADA
                     LAYPSGYVFKGTEKIRVTNVKGDHAEQTLTGIYTTPEPVAPTIEWAVIDASDPLKPFM
                     EAKVIAGLNAPLDWIKLFPNNANLSPVQLTLVADVYRRPDVWTCSLADEMNLGMDMWN
                     TMTLTAHAQGGLYSEWNGKFDILRPYNVGLKDLYSYYGWYWDDDWSQNVLNLDNSEVS
                     GFAWEEGDSVPYPNDNFELWVWWQGGNWELRINKVQSYKTSGIPYDDITQQTANFLKD
                     HLATVPSYATIQNGDTFLLRTSEGRLAKLEIVECVPYDPSGAYNRAQRTRVRYTVFGN
                     "
     gene            2955..3629
                     /locus_tag="VK150_07980"
     CDS             2955..3629
                     /locus_tag="VK150_07980"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLP31285.1"
                     /translation="MSQSNPILLIEDDPAQRLLLAAYLRQAAFRVEEAESLAQGRTLA
                     AATHPRLVLLDLNLPDGDGMELARELIRRAVPVLVVTSRPEDRLAALELGVDDFVEKP
                     YDPRELLARIQNLLRRCGEPSLPTLPVGSFHLDAPGRRLLDGEGTEVELTRGEFDLLV
                     ALMEAKGRVLTRADLSEIISPEGSTVCSRSVDTLVSRLRRKLADDPRHPSLLQTVPGV
                     GYRAPG"
     gene            3633..>4914
                     /locus_tag="VK150_07985"
     CDS             3633..>4914
                     /locus_tag="VK150_07985"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HLP31286.1"
                     /translation="MQAGPLALSRWLGVFIHPATEAAFQEDLQPRLAAQLRFLAFLPG
                     LYVAALAFDHQTFGNTRPLWILATLRLGVWGLLGIAGLLARSRRPLKSAQRFLFAGTT
                     LVTVTEVVEYHLLSLTRGPAHPQDLPFMVLFVLGIYMMLPMALRLSLISALIGTVVFL
                     GYLVAAEGPGAPAVGLMALYLLFANGVGFAFRVTWNRTQRRDFALRDRLEHEVAERKA
                     AEDAARRANEAKGRFLAMMSHEIRTPLNGVLGGVQLLQAPGLRPEQRQPLEIIAHNGH
                     LLARLLDDLLDLARMEAGRLGLAREAFSAGDLLAAVDATLHPQALAKGLAFRVEQHGP
                     VPPSLVGDGLRLRQVLVNLAGNAVKFTDRGEVVLSLEATEEPGPPRQVRCAFCVRDTG
                     PGLDRAAQHRVFAPFEQGDMSTQRRHGGAGLGLAI"
BASE COUNT          718 a         1622 c         1680 g          894 t
ORIGIN      
        1 ctgcgcccaa ggcagggggt aggtcttcgc gtttccgggg aaggtctggt caggctggcc
       61 ttccccggaa ttcgcgggaa ccctggtttc agttcccgaa cacggtgtac cggacgcgcg
      121 tccgctgggc gcggttgtag gcgccggagg gatcgtaggg cacgcattcg acgatctcaa
      181 gcttggccaa ccgtccctcg ctggtcctga gcaggaaggt gtcgccgttc tggatggtgg
      241 cgtaactggg aacggtcgcc aggtgatcct tcaggaagtt ggcggtctgc tgggtgatgt
      301 cgtcataggg gatgcccgac gtcttgtagg actggacctt gttgatgcgc agctcccagt
      361 tgccaccctg ccaccagacc cacagttcga agttgtcgtt ggggtagggc acgctgtcgc
      421 cctcttccca cgcgaagccg ctgacctcgc tgttgtcgag attcaggaca ttctgggacc
      481 agtcgtcatc ccagtaccac ccgtaatagg aatagaggtc cttcaggccc acgttgtagg
      541 ggcggaggat gtcgaatttc ccgttccact cgctgtagag ccccccctgg gcgtgggccg
      601 tcaaggtcat ggtgttccac atatccatgc ccaggttcat ctcatccgcc aggctgcagg
      661 tccacacatc cggtcgccgg tagacgtccg cgaccagggt gagctggacg ggggacaaat
      721 tggcgttgtt gggaaagagc ttgatccaat ccagcggggc gttgaggccc gcgatcacct
      781 tggcctccat gaagggcttg agcgggtcgc tggcgtcgat cacggcccac tcgatggtcg
      841 gcgccacggg ctctggcgtc gtgtagatcc ccgtgagggt ctgctcggcg tgatcgccct
      901 tgacgttggt gacacggatc ttttccgtgc ccttgaagac atagccgctg ggataggcca
      961 aggcatccgc ctgcgggtgg tagacgtaga agtccgatcc ggccaggtcc acggacatga
     1021 ggcgggcgtt cccgtccttg tcgatgaact ccgccttggc gacgccgttg tagtcgtcca
     1081 ccaccgcatt gacgctgccg gtggcgctgt cgtagtaggc gtaatagatc tcgggctcat
     1141 agacgaagac accgtccacg ggggtgccgt ccaccgagtc ccggggcacc ttggccacga
     1201 tcacggaact aggattcagg cggaggttga agaggttgaa gcccgccggg aggggctttc
     1261 ccttctccag gccattcgcg gtgtaggtgg caccgtccag gcagatggcc cagtcgtcca
     1321 gcttcatctc cttggtcagc ccgcccatgt cccggtaggt gaagcccagc ccctggtgcg
     1381 tgtagccgcc cacgccccac aggaaggcgt ctcccagggt caccgagggc gccgtcggcc
     1441 ggccatccgc gtagaccaag ctgtggacga agttgccgtc gccgatgtcg aagtagaggt
     1501 ttgcgcagac ggccttgcag cgggcccggt actcgttcca gtcccccatg cgctcatagg
     1561 cgccggtggc ggggttcagg cgcatgacgt ccgcggccat ctgggtcatc gtgatgttca
     1621 cgggggcgcc gcattccagg gccctcagtt cattcaaggt gaggtagatg tccttgccgg
     1681 cctgattgct gtccaccacc cagcagacgc cgggggtgga gggatacatg cctccaggtt
     1741 caaggaggtt gacctggttt tcgccgggct tgaacgtggc cacattatgg cccccgatcc
     1801 gcagggtgag ggtgggcacg acattgcttg cgcaggcgct cccctggttg tacaccctca
     1861 ggaagagctt gatcttggcg gcctcggtgg ggttcgtggt cgtggcctgg gaccactcct
     1921 ccgtgctcac cagggagccg ccgcgggacg tggcgctgct ggtctcgtgg gtgttcgcga
     1981 tgagaccgcc gtagttcgcg tgggccttga cggaggcctt gacgccgggg aactcgaatc
     2041 ccacctcggc ctcgacgccc acttcccagt tgtcctccct cgtgcgggag tgcgtggcgg
     2101 tggtggtggc gtcccaggtg gtccccttgc tcacggacct gccctgggtg acagtgatgg
     2161 aatcgttgag ggtcacccgg tacccctcca tccgcaccac gatctccggc agggcgggca
     2221 ccatgggcag gtcacccggg cccttcacgg acacgtccat gttggtgccg gagacctcgg
     2281 tgcggtcgtc gaaaggatcc tgatccgtgg agcgctggtt cggatcggtc ttgtagtagc
     2341 gcgcggagtg gtcgacgccg tcccagagct tgggctttcc ggccagggca tcgtaggtga
     2401 agccgtagaa ctccaggtag ttggggatgc cgtccccgtc gctgtccacc agttcgccat
     2461 cgttgatgcc gttgccgtcg tcgtccttgt cgagggcggc gatgacgccg ttcccgttca
     2521 cgtcgggaag ggcgtcgctc tcgccccact tcatgtcgcc gaagacctcg acattgtcga
     2581 agatgccatc tccatccgaa tccaccttca gggggtcggt gcggagcagg tcccgctcga
     2641 cgtcatcggg gatgccgtcc ccgtccgtgt cgggggtgcc ggcccggagg gacgcgatgg
     2701 tcttttcgta gacctgggcg acggtcagcc cgcccggggt cgcggagggg gcggacctgc
     2761 ttctgccgcc gcagccgagg gcgaaggaca gggccagcag gagggacagg cgcaagggga
     2821 ttccggggtt catgggggcc tccgcggcgg tgcgtggcgg ttgagtgggc acgactttcc
     2881 cgggaaaggt aacgaaccca tgtcaatagc ttgccaacgg gtggacaatg gcctgtcaac
     2941 cacccctccc agccatgagc cagtcgaatc ccatcctgct catcgaggac gaccccgccc
     3001 agcgtctcct gctggcggcc tacctgcgcc aggcggcctt ccgcgtggag gaggcggaga
     3061 gcctggccca gggccgcacc ctggccgcgg ccacgcatcc ccgcctggtg ctgctggacc
     3121 tgaacctgcc ggatggcgac ggcatggaac tggcccggga gctgatcagg cgggccgttc
     3181 ccgtgctcgt cgtgaccagc cgcccggagg accggcttgc ggccctggaa ctgggggtgg
     3241 atgacttcgt ggagaagccc tacgaccccc gcgaactgct ggcccgcatc cagaacctgc
     3301 tgcggcgctg cggcgagcct tccctcccca ccctccccgt ggggagcttc cacctggatg
     3361 cgccgggacg acgcctcctg gacggcgaag ggacggaggt cgaactcacc cggggcgagt
     3421 tcgacctgct cgtcgccttg atggaggcca agggacgggt gctgacccgg gcggacctgt
     3481 ctgagatcat cagccccgaa ggctccaccg tctgcagccg cagcgtggac acgctggtgt
     3541 cccggctgcg ccggaaactg gcggacgacc cgaggcaccc gtccctgctc cagaccgtgc
     3601 caggcgtggg ctaccgggcc ccgggctgag ctgtgcaagc cgggcccctg gccctttccc
     3661 ggtggctggg cgtcttcatc caccccgcca cggaagccgc cttccaggag gacctccagc
     3721 cgcgcctggc cgcgcagctc cggttcctgg ccttcctgcc cggcctctat gtggcggccc
     3781 tcgccttcga ccatcagacc ttcgggaaca cccggcccct atggatcctg gcgaccctgc
     3841 gcctaggtgt ctggggcttg ctgggcatcg ccgggctcct ggcccgatcc cgccgtcccc
     3901 tgaaatcggc gcagcgcttc ctcttcgcgg gcaccacctt ggtcacggtg acagaggtgg
     3961 tggagtacca cctgctctcc ttgacccgtg gccctgccca cccccaggac ctccccttca
     4021 tggtcctctt cgtgctcggc atctacatga tgctgcccat ggcgctgcgc ctgagtctga
     4081 tctccgcgct catcggcacg gtggtcttcc tgggctacct ggtggccgcg gagggcccgg
     4141 gcgccccggc ggtgggcctc atggccctct acctgctgtt cgcgaacggg gtcgggttcg
     4201 ccttccgcgt gacctggaac cgcacccaac gccgggattt cgccctgagg gaccgtctgg
     4261 agcacgaagt ggcggaacgg aaggcggcag aggacgcggc gcgccgggcg aacgaggcca
     4321 agggccgctt cctggccatg atgagccacg agatccgcac cccgctgaac ggtgtgctcg
     4381 gtggcgtcca gctgctccag gcgccaggcc tgcgtcctga gcagcggcag ccgctggaga
     4441 tcatcgccca caacggacat ctgctggcgc ggctgctgga cgacctgctg gacctggccc
     4501 gcatggaagc cgggcgcctg gggctggccc gggaggcttt cagcgccggg gacttgctgg
     4561 ccgccgtgga tgccaccctc cacccccagg ccttggccaa gggcctggcc ttccgggtgg
     4621 agcagcacgg ccccgtgcca ccgagcctgg tgggggacgg actgcgcctg cgtcaggtgc
     4681 tggtcaacct ggccggcaac gccgtgaaat tcaccgaccg cggggaggtg gtgctctccc
     4741 tggaggcgac ggaggaacct ggtccgccgc ggcaggtccg ttgcgccttc tgtgtgaggg
     4801 acacggggcc gggcctggac cgggcggccc agcaccgggt gttcgccccc ttcgaacagg
     4861 gggacatgtc cacccagcgc cgacatggcg gggcgggcct cggcctcgcc atca
//
LOCUS       DATGWW010000550         1692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_356836, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000550 DATGWW010000000
VERSION     DATGWW010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356836"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VK150_07990"
     CDS             <1..188
                     /locus_tag="VK150_07990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31287.1"
                     /translation="LLNLKDMVSGFNVTLQDLQNTQQDTDYPQAIADYNTDQIIQQAT
                     LNTMARSNQTNLFDYLG"
     gene            complement(176..1519)
                     /gene="trmFO"
                     /locus_tag="VK150_07995"
     CDS             complement(176..1519)
                     /gene="trmFO"
                     /locus_tag="VK150_07995"
                     /inference="COORDINATES: protein motif:HMM:NF003739.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HLP31288.1"
                     /translation="MIHIIGAGLAGSEAAWQLASRGHKVRLSEMRPQWNTPAHTTGQA
                     AEMVCSNSFKSDDPNSATGILKAELRQMNSLILGCAEATRVPAGSSLAVDREAFSNRV
                     TETLKAHPNIQWHEEQIVAPDLSHPTILATGPLTADPLADWLSAVTGQGRLHFYDAIA
                     PIVERDSVDMDVAWMAARYDKGGADFINCPLDKAQYECFLDALLAAERTPLHDVDTPY
                     FEACLPIEVMADRGRETLRHGPMKPVGLDDPRTGRWPHAVVQLRQDTLAGDHFNLVGF
                     QTRLKWGAQKEVFRLIPGLGAAEFARFGSIHRNTYVQAPSVLDATLAVKSVPNLWLAG
                     QLSGVEGYLESAAGGLAAAFAVDRATRGLAPSPFPPETVIGSLLHYLAHASAKDFGPT
                     NAMLGLLPPISEEGLDLRALKRTGGTRAVKQAKGEVHRRRALEALTAHLQAAQPR"
BASE COUNT          278 a          532 c          601 g          281 t
ORIGIN      
        1 ggctgctgaa cctcaaggac atggtctccg gattcaacgt caccctgcag gacctgcaga
       61 acacccagca ggacacggac tatccccagg cgatcgccga ctacaacacg gaccagatca
      121 tccagcaggc caccctgaac accatggcga ggtccaacca gaccaacctg ttcgactacc
      181 tgggctgagc cgcctgcagg tgggcggtca gggcctcgag cgcccgccgt cggtggacct
      241 cgcccttggc ctgcttgacg gcccgagtgc cgccggtccg cttcagagcg cgcagatcga
      301 gaccttcctc ggagatgggc ggcaggaggc cgagcatggc gttggtgggg ccgaaatcct
      361 tggccgaggc gtgggccagg tagtgcagga ggctcccgat gaccgtctcg ggagggaagg
      421 gcgagggtgc gagcccccgg gtggcacggt ccacggcgaa ggctgccgcc aggccacctg
      481 cggcggattc caggtagccc tcgacgcccg agagctgacc ggcgagccaa aggttcggca
      541 ctgatttgac agccaatgtc gcatccagca ccgagggcgc ctggacgtag gtgttgcggt
      601 ggatgctgcc gaaccgtgcg aattcggcgg caccgaggcc ggggatcagg cggaagacct
      661 ctttctgcgc gccccacttg agccgggtct ggaagcccac caggttgaag tggtcgcccg
      721 cgagcgtgtc ctggcgcaac tgcaccaccg cgtggggcca gcggccggtc ctggggtcgt
      781 cgaggcccac cggcttcatg gggccgtgac gcaaggtctc gcgtccgcga tcggccatca
      841 cctcgatggg caggcaggcc tcgaaatagg gcgtgtccac atcatgcagg ggcgtgcgtt
      901 ccgcggccag cagggcatcc aggaaacact cgtactgcgc cttgtcgagg gggcagttga
      961 tgaagtcggc gccgcctttg tcatagcggg cggccatcca cgcgacatcc atgtcgacgc
     1021 tgtcgcgctc cacgatgggc gcgatggcat cgtagaagtg gaggcgtccc tggcccgtga
     1081 cggcagagag ccagtccgcg agcggatccg cggtgagcgg gcccgtcgcg aggatggtcg
     1141 ggtggctgag gtcgggcgcg acgatctgct cctcgtgcca ctggatgttc gggtgggcct
     1201 tcaaggtctc ggtgacgcga tttgagaagg cctcccgatc cacggccagg ctgcttccag
     1261 cgggaacccg cgtggcttcc gcgcagccca ggatcaggga attcatctgc cgcagctcgg
     1321 ccttgaggat gccggtggcg gaattgggat cgtcgctctt gaaggagttc gagcacacca
     1381 tttccgcggc ctggccggtg gtgtgggccg gcgtgttcca ttggggccgc atctccgaaa
     1441 gccggacctt gtgtcccctg gaagccagct gccaggcggc ctccgatccc gccagccccg
     1501 ccccgatgat gtggatcacg cgctccccca gtgggggctg attctacgcc aggcctggag
     1561 attcgaggtt ccgggcgggg ccggggaaaa tttctgttgc actttcgggc ctcggtgtta
     1621 gtctgaatgt cctgcgcagt tgaggctgcg aggtgccagg gggagccgag aggcgacttc
     1681 ggaccatgcg ga
//
LOCUS       DATGWW010000551         2212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_117301, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000551 DATGWW010000000
VERSION     DATGWW010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117301"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..888
                     /locus_tag="VK150_08000"
     CDS             <1..888
                     /locus_tag="VK150_08000"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HLP31289.1"
                     /translation="YRRLAAAGTLPIRVFAYLNHDHALMLRELKAPRAKQLSFLQVQG
                     VKFYLDGALGSRGARLLAPYADEPATSGLWVTDPIKVGQDAAITLRAGYQPAIHAIGD
                     AANQVALDLLAKALKKGRGGLPPRIEHAQIVTAEDAARFGRLGVVASVQPVHCTSDHS
                     WTPARLGPQRVNEAFPWRAFLNGGALLAFGSDAPVEEPNPFAGLAAAETRQDAHGNPP
                     GGFLPDQRLTRLEAVRAYTAGNAQALGRAKDLGTLEKGAVADLLWVQAPLGGLSPEAL
                     RTVRPGRLWVNGVEVPLAH"
     gene            893..1576
                     /gene="rpe"
                     /locus_tag="VK150_08005"
     CDS             893..1576
                     /gene="rpe"
                     /locus_tag="VK150_08005"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HLP31290.1"
                     /translation="MNLRPSSPMLAPSLLSADFTRLGEELRMIETAGAQVVHVDVMDG
                     RFVPNITIGLPVVESLRKATSLPLDCHLMIVEPLRYAAEFVKAGADWVSIHQEADPHL
                     HRTLAAIRQAGGKAGVVLNPGTPVETLVDLVGDFDFVLLMSVNPGFGGQSFIPRVLDK
                     VKRLDALRSERGVPFFIQVDGGVGMKNAADLTRAGADSLVAGNAVFKAEHPALAVSGL
                     LDEMRKGRG"
     gene            1573..>2212
                     /locus_tag="VK150_08010"
     CDS             1573..>2212
                     /locus_tag="VK150_08010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31291.1"
                     /translation="MRFDLDRYNRVVWGLLGTLALIGLALLLVTGAVSLWPSRHLAGT
                     IPTQGAPDQPGPDLPAPSLRLGLPEPVPGTEFVLIPVEALVDGRRGGGGGFSGYSKGE
                     SGAPLFNMVFLNTRTRTTHALLARKALITRYEVLEDGHGDAAKAAALVLRVVDADTNR
                     NGRLDDEDAEKVYLCDPSGKDLREILPVGAICERWQYEPSRRTLYLLTRPQGE"
BASE COUNT          310 a          852 c          741 g          309 t
ORIGIN      
        1 taccggcgcc tggccgccgc cggcaccctg cccatccgcg tgttcgccta cctgaaccac
       61 gaccacgccc tcatgctgcg cgagctgaag gctcctcggg cgaagcagct ctccttcctg
      121 caggtgcagg gcgtgaagtt ctacctggac ggcgccctcg gcagccgcgg cgcccgcctg
      181 ctggccccct acgccgatga gccggccacc tcgggcctgt gggtcaccga tcccatcaag
      241 gtgggccagg acgccgccat caccctccgc gccggctacc agcccgccat ccacgccatc
      301 ggcgacgcgg ccaaccaggt cgccctggat ctgctggcga aggccctgaa aaagggccgg
      361 ggcggcctgc cgccccggat cgagcacgcg cagatcgtca ctgccgagga cgccgcccgc
      421 ttcggccgtc tcggcgtggt cgccagcgtg cagcccgtgc actgcacctc ggaccacagc
      481 tggacgcccg cgcggctggg gccccagcgc gtgaacgaag ccttcccctg gcgcgcgttc
      541 ctcaacgggg gcgccctgct cgccttcggc agcgacgcgc cggtggagga gcccaacccc
      601 ttcgcgggcc tcgcggccgc ggagacccgg caggacgccc acggcaaccc gcccggcggc
      661 ttcctgccgg atcagcgcct cacccgcctt gaggccgtcc gcgcctacac cgccggcaac
      721 gcccaggccc tgggccgggc caaggacctg ggcaccctcg agaagggggc cgtggccgac
      781 ctgctgtggg tgcaggcgcc cctcggcggc ctcagccccg aggccctgcg gacggtccgg
      841 cccgggcgcc tctgggtgaa cggcgtggaa gtccccctgg cacactagag ccatgaacct
      901 ccgtccctcc tcccccatgc tcgcgccctc cctcctctcg gcggatttca cgcggctggg
      961 cgaggaactc cggatgatcg agaccgccgg cgcccaggtg gtgcatgtgg acgtcatgga
     1021 cggccgcttc gtgccgaaca tcaccatcgg cctgccggtg gtggagagcc tgcggaaggc
     1081 caccagcctg cccctcgatt gccacctcat gatcgtggag ccgctccggt acgccgccga
     1141 gttcgtcaag gcgggcgccg actgggtgag catccatcag gaagccgatc cccatctcca
     1201 ccgcaccctg gcggccatcc gccaggcggg cgggaaggcc ggggtggtgc tcaatcccgg
     1261 cacaccggtg gagacgctcg tggatctcgt cggcgacttc gacttcgtgc tgctcatgag
     1321 cgtgaaccca ggctttggcg gccagagctt catcccccgg gtgctcgaca aggtgaagcg
     1381 gctcgacgcc ctgcgcagcg agcgcggcgt gcccttcttc atccaggtgg acggcggcgt
     1441 gggcatgaag aacgccgcgg acctcacccg cgccggcgcc gacagcctcg tggcagggaa
     1501 tgccgtgttc aaggccgagc atcccgccct tgccgtgtcc ggcctgctcg acgaaatgcg
     1561 gaagggccgc ggatgaggtt cgacctggac cgctacaacc gggtcgtctg gggcctcctc
     1621 ggaacccttg cgctcatcgg cctggcgctc ctgctcgtca ccggggcggt ctccctctgg
     1681 cccagccggc acctggccgg gaccatcccg acccagggcg cccccgacca gccgggtccg
     1741 gacctcccgg cgccgtccct gcgcctcggc ctgcccgagc cggttcccgg gacggagttc
     1801 gtcctcatcc ccgtcgaggc cctggtggac ggccggcgcg gcgggggcgg cggcttcagc
     1861 gggtattcga aaggcgaatc cggcgcgccg cttttcaaca tggtcttcct gaacacccgc
     1921 acccggacca cccacgcgct cctggcccgg aaggccctca tcacccgcta cgaggtgctg
     1981 gaggatggcc acggggacgc cgccaaggcc gcggccctgg tgctgcgggt ggtggatgcc
     2041 gacacgaacc gcaacggccg gctggatgac gaggatgccg agaaggtcta cctctgcgac
     2101 ccgtccggca aggacctgcg ggagattctc cccgtcggcg cgatctgcga acggtggcag
     2161 tacgagccca gccggcgcac gctctacctc ctcacgcggc cccagggaga gg
//
LOCUS       DATGWW010000552         1561 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_267551, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000552 DATGWW010000000
VERSION     DATGWW010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267551"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /locus_tag="VK150_08015"
     CDS             complement(<1..465)
                     /locus_tag="VK150_08015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31292.1"
                     /translation="MTSAMVDWRRRALWLSALTIVYNLAEGLVSMAFGWADDSIALFG
                     FGADSFIEVASALLVLWKLLDHGNLARERKATRAIGWLFLALTAGIAGGALLQLTAQR
                     HPPTTVPGLVISLLSLSFMVFLWRAKLQAARALDSATVAADAACSLACIQLSL"
     gene            complement(462..902)
                     /locus_tag="VK150_08020"
     CDS             complement(462..902)
                     /locus_tag="VK150_08020"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP31293.1"
                     /translation="MAHPALLPVVLTCNTDLRFIDLIQVVGAEFLKHLSFSQEDGERL
                     WLAIQEGIANAMRHGNKLQKDKPVKVTFTPRVDRFEIRIEDRGPGVDLEALPDPNLPE
                     NLLKPGGRGVFFMRQVMDEVLMERTPGGSTLVLVKARKVREPHS"
     gene            1114..>1561
                     /locus_tag="VK150_08025"
     CDS             1114..>1561
                     /locus_tag="VK150_08025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31294.1"
                     /translation="MKARWWLVLLVLLAGFGVLGLGGRQIAQNAPPIPQRVVAEDGTV
                     LVAPGQILEGQVSYLGHGGQHIGSIWGHGAYLAPDWTAKALHQWASHTLAGVQAQGGS
                     PADAKASTISIFQNFRYESSTGTLTLGAAQAAAYLKTRTELAKVAVD"
BASE COUNT          276 a          489 c          556 g          240 t
ORIGIN      
        1 cagggagagc tggatgcagg ccaggctgca ggccgcgtcg gccgccacgg tggcgctgtc
       61 cagggcgcgg gccgcctgga gcttggcgcg ccacagaaac accatgaagg agagcgagag
      121 cagcgagatg accagacccg gcaccgtggt cggcgggtgc cgctgcgccg tcagctgcag
      181 gagcgcaccg ccagcgatgc ccgccgtgag ggccaggaag agccagccga tggcgcgggt
      241 ggccttgcgc tcgcgcgcga ggttgccatg gtccagcagc ttccacagca ccagcaaggc
      301 cgaggccacc tcgatgaagc tgtcggcgcc aaagccgaag agggcgatgg aatcatcggc
      361 ccagccgaag gccatggaca ccagcccctc ggcgaggttg tagacgatgg tcaaggcgga
      421 gagccagagg gcccgccgcc gccagtccac cattgccgac gtcacgaatg gggctcgcgg
      481 accttgcggg ccttcaccag gaccagcgtg gagccgcccg gggtgcgctc catgaggact
      541 tcgtccatca cctggcgcat gaagaacacg ccccggccgc cgggcttgag gaggttctcg
      601 ggcaggttcg gatccgggag ggcctcgagg tccacgccgg ggccgcgatc ctcgatgcgg
      661 atctcgaagc gatccacccg cggcgtgaag gtcaccttga cgggcttgtc cttctggagc
      721 ttgttgccgt ggcgcatggc gttggcgatg ccttcctgga tcgccagcca gagccgctcg
      781 ccgtcctcct ggctgaagct gaggtgcttg aggaactcgg cgcccaccac ctggatcagg
      841 tcaatgaagc gcagatccgt gttgcaggtc aggacgacgg gcagaagcgc tggatgggcc
      901 atgggcgagg attccctttc acagaccgga agaaccaagc tcaaggtact tggaatccga
      961 ccccacaggc cagtggtttt gccatggcca gcctgggttc ccccggggaa tcggggcgtg
     1021 tcgaggatca caattaagaa tagttggtcc taaataagca gatttatgga acactgctgt
     1081 ccggcgagca gatccgccgt gagggaggtt tcgatgaagg cacgttggtg gctggtgttg
     1141 ctggtgctcc tggcggggtt cggagtgctc gggttgggcg ggcggcagat cgcccagaac
     1201 gccccgccca tcccccagcg ggtggtggcc gaggacggca cggtgctggt ggcgccgggg
     1261 cagatcctcg aggggcaggt cagctacctg ggtcacggtg gccagcacat cggctccatc
     1321 tggggccatg gcgcctacct ggcgcccgac tggacggcca aggcgctgca ccagtgggct
     1381 tcccacaccc tggcgggcgt gcaggcccag ggcgggtccc ccgcggatgc caaggccagc
     1441 accatctcca tatttcagaa ttttaggtat gaatcatcga cgggcacgct gaccctcggc
     1501 gccgctcagg cggcggccta cctcaagacc cgcaccgagt tggcgaaggt cgccgtggac
     1561 g
//
LOCUS       DATGWW010000553         1756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_42015, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000553 DATGWW010000000
VERSION     DATGWW010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42015"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..964
                     /locus_tag="VK150_08030"
     CDS             122..964
                     /locus_tag="VK150_08030"
                     /inference="COORDINATES: protein motif:HMM:NF013539.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HLP31295.1"
                     /translation="MSASKNPLLNRLHSAEGLSPSQRQIADCLIANMNEAALWGVEEL
                     AAKSQTCVATVVRFAKKLEYSGYLEMRKALVSSAKKHYGRGEQLLQAPVQASATLLEV
                     ARRDVRNIETLVKAVNEDLLQRVVKQLKASRIRLAIGDGVSALMARQLAYLLINTGLP
                     VMEGNPADFATQVGMLDSKDLLIAISITPYTQETLDAAAYARKRGIPILAFTDTLNSP
                     LAKSATLTLPIPGENLLFSHSVTAFGVLAHAIATSIASQAPQRALSKLREVERVAHRK
                     FAKT"
     gene            1173..>1756
                     /locus_tag="VK150_08035"
     CDS             1173..>1756
                     /locus_tag="VK150_08035"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HLP31296.1"
                     /translation="MPRHGKSLFSALVLALVAAPAALVAQSTTSSALTGTILDQNGRP
                     VVGALVRVTSESLIGGSRTAVTAENGRYRIPILPPGRYSITVEAKGFPTRKASEIAEL
                     GKTTTVDFKLSPEASAVVEVVGQSGAEEMVSTTTRNFRAEDIENLPIKRDIAAIAALT
                     PGVNLTVSSGARVSASGFGGDRDNANAYLINGINV"
BASE COUNT          311 a          640 c          536 g          269 t
ORIGIN      
        1 cacgaaggcc cgccggcgag gcctcgacga ggccctggcg cagctggcct ccttcctggg
       61 cgccgaccgg atccagctcc ccacctaatt gggagtgggc gttcgcgcta tcctttgccc
      121 catgtccgcc tccaagaacc ccctgctgaa ccgcctacac agcgctgaag ggctgtcccc
      181 cagccagcgg cagatcgcgg actgcctcat cgccaacatg aacgaggcgg ccctctgggg
      241 cgtggaggag ctggccgcca agtcccagac ctgcgtggcc acggtggtgc gcttcgccaa
      301 gaagctggag tactcgggct acctggagat gcgcaaggcc ctggtcagct ccgccaagaa
      361 gcactacggc cggggcgagc agctgctgca ggccccggtg caggcctcgg ccacgctgct
      421 ggaggtggcc cgccgcgacg ttcgcaacat cgaaaccctg gtgaaggccg tgaacgagga
      481 cctgctgcag cgggtggtga agcagctgaa ggccagccgc atccgtctgg cgatcggcga
      541 cggcgtctcc gccctcatgg cccggcagtt ggcctacctc ctcatcaaca ccggcctgcc
      601 ggtcatggag ggcaacccgg ccgatttcgc gactcaggtc ggcatgctgg attccaagga
      661 cctgctcatc gccatcagca tcacgcccta cacccaggaa accctggacg cggcggccta
      721 tgcgcgcaag cggggcatcc ccatcctggc cttcacggac accctgaatt cccccctggc
      781 caagtccgcc accctgacgc tccccattcc cggcgagaac ctgctgtttt cccacagcgt
      841 cacggccttc ggtgtcctgg cccacgccat cgccacctcc atcgccagcc aggcgcccca
      901 gcgggccctg agcaagctgc gcgaggtgga gcgggtggcc caccggaagt tcgccaagac
      961 ctagcccgcg ccgcgagaca gggctggatc aagcatgggg ggaggccgag cgcttccccc
     1021 ggggggcggg gctccagctg aaacctggat gcaacctcat tcaggcgggc aggatccgcc
     1081 aggatggcga atgaaaaaaa acttgactca agtttcactg aagcattact tttttgtcac
     1141 caatccaatt ctaacttttt tcaggaggcg tgatgcctag acatggcaag tccctcttca
     1201 gcgcgcttgt cctggcgctg gtggccgcgc ctgcggccct ggtggcccag agcaccacca
     1261 gctcagccct cacgggcacg atcctggacc agaacggcag gcctgtggtc ggcgccctgg
     1321 tgcgcgtgac ttccgaatcg ctgatcggcg gcagccgcac agcggtcacg gccgagaacg
     1381 gccgctaccg catccccatc ctgcctcccg gccggtactc gatcacggtc gaggccaagg
     1441 gcttccccac ccgcaaggcc agtgagatcg ccgagctcgg caagacgacc accgtggact
     1501 tcaagctctc ccccgaggcc tcggccgtgg tcgaggtggt gggccagtcc ggcgccgagg
     1561 agatggtgtc caccaccacc cgcaacttcc gcgcggaaga catcgagaac ctgcccatca
     1621 agcgcgacat cgcggccatt gcggccctca cccccggcgt gaacctcacc gtgagctccg
     1681 gcgcccgcgt gtccgcgtcg ggcttcggcg gcgaccgcga caacgccaac gcctacctca
     1741 tcaacggcat caacgt
//
LOCUS       DATGWW010000554         2559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_42060, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000554 DATGWW010000000
VERSION     DATGWW010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2559
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42060"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1631)
                     /gene="ggt"
                     /locus_tag="VK150_08040"
     CDS             complement(<1..1631)
                     /gene="ggt"
                     /locus_tag="VK150_08040"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HLP31297.1"
                     /translation="MSSPRFRLALAFSLTLAATQSPALRAGDRVTGRAFATRSEVAAQ
                     HGMACTSQALVTQIALDVLKQGGSAVDAAIAADAALGLMEPTGSGMGGDLYAIVWDAK
                     GRKLHGLNASGRSPKSLTLEHFQKLGLKHIPPHGPLPVSVPGCVDGWFELHRKFGKLP
                     MAQVLAPAIRYAKEGFPVSELIAYYWDRSVPALGKFPGFLDTFTVDGKRAPRNGEIFR
                     NPRLARTLELLGKEGRDAFYKGEIARKIDAYMKAQGGFLSYEDLAAHHSDWVEPVSVN
                     YRGYDVWELPPNGQGIAALQMLNILEGYDFSKIPFGSPRHVHLFTEAKKLAFEDRAKF
                     YADAPFMKVPLSWLLSKDYAAQRRALIHEDRAARRLEAGHPPLKEGDTIYLTTADGEG
                     NMVSLIQSNYRGMGSGMTPGDLGFCLQDRGELFNLEAGNANTYAPGKRPFHTIIPGFI
                     TKDGQPFLSYGVMGGEFQPIGHAQIVMNLVDFGMNAQEAGDAPRMSHDGSPEPTGEKG
                     KLPGTIQLESGFPYETVRELMNMGHGVAWMLGGYGG"
     gene            complement(1681..>2559)
                     /locus_tag="VK150_08045"
     CDS             complement(1681..>2559)
                     /locus_tag="VK150_08045"
                     /inference="COORDINATES: protein motif:HMM:NF027637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HLP31298.1"
                     /translation="GATTLGTKNLQRVMGYLPQVALKPGQDFRELAHLYDAVWGQWRR
                     ELGHVAQLVGGFDTQNKHAGQSGGRFTPIARARQAEAVKYLQGAVFKTPAWILDPALL
                     AKLEPGSGQMRLLAAQRGILMTLLDRARLTRLEEQESLLGDKAYSAGQLLLDLRGGIF
                     TELQRPGSRVDPYRRNLQRAYLDLLGNLLNQPPTPSVAMGGLGLSLLPVNTADDTRGA
                     VRAELKALQALVAKPTQDKAAKDKAAKAHLDDLKDQIARILDPKFNQGAQGVPVTVTT
                     RRLGDTCWPGADDVLN"
BASE COUNT          346 a          806 c          967 g          440 t
ORIGIN      
        1 ccgccgtagc cgcccagcat ccaggccacg ccatggccca tgttcatgag ttcccgcacg
       61 gtctcgtagg ggaagccgct ctccagctgg atggtgcccg gcagtttgcc cttctcgccg
      121 gtgggctcgg gcgagccgtc atggctcatg cgcggcgcgt cgccggcttc ctgggcgttc
      181 atcccgaaat ccacgaggtt catgacgatc tgcgcatggc cgatgggctg gaactcgccg
      241 cccatgacgc cgtagctgag gaagggttgg ccgtccttcg tgatgaagcc ggggatgatg
      301 gtgtggaagg gccgcttgcc cggcgcgtag gtgttggcgt tgcccgcttc caggttgaac
      361 agctcgccgc ggtcctggag gcagaaaccc aggtcgccgg gcgtcatgcc gctgcccatg
      421 ccgcggtagt tgctctggat gaggctcacc atgttgcctt cgccgtcggc ggtggtgagg
      481 tagatggtgt cgccctcctt caggggcggg tggcccgctt cgagccgccg cgcggcgcgg
      541 tcctcgtgga tgagcgcccg gcgctgggcg gcgtagtcct tggacagcag ccaggagagg
      601 ggcaccttca tgaagggcgc gtcggcgtag aatttggccc gatcttcaaa ggccagcttc
      661 ttggcctcgg tgaagaggtg cacgtggcgg gggctgccga aggggatctt cgaaaaatcg
      721 tagccctcga ggatgttcag catctgcagg gcggcaatgc cctggccgtt ggggggcagt
      781 tcccacacgt cgtagccccg gtagttcacg ctcacgggct ccacccagtc cgagtggtgg
      841 gcggcgagat cctcgtagct gaggaatccc ccctgggcct tcatgtaggc gtcgatcttc
      901 cgggcgatct cgcccttgta gaaggcgtcg cggccctcct tgccgaggag ctccagggtg
      961 cgggccagcc gcgggttgcg gaagatttcg ccgttcctgg gcgcgcgctt gccgtccacc
     1021 gtgaaggtgt ccaggaagcc cgggaacttg cccagggcgg gcacgctgcg atcccagtag
     1081 taggcgatga gttcgctcac cgggaaacct tccttggcgt agcggatggc cggggctagg
     1141 acctgggcca tgggcagctt gccgaatttc ctgtgcagct cgaaccagcc gtccacgcag
     1201 ccgggcacgc tcacgggcag ggggccgtgg ggcgggatgt gcttgaggcc gagcttctgg
     1261 aaatgttcca gcgtgagcga tttcggggag cgcccgctgg cgttgaggcc gtgcagcttc
     1321 cggcccttgg cgtcccacac gatggcgtag aggtcgccgc ccatgccgct gcccgtgggt
     1381 tccatgaggc ccagggccgc gtccgccgcg atggcggcgt ccaccgccga tccgccctgc
     1441 ttcagcacgt ccagggcgat ctgcgtcacc agggcctggc tggtgcaggc catgccgtgc
     1501 tgggcggcca cctccgagcg ggtggcgaag gcccggcccg tgacccggtc cccggcccgg
     1561 agggcggggg actgggtcgc ggccagcgtc aggctgaagg cgagggcgag gcggaaacgc
     1621 gggctggaca tggaacctcc cggaggcggg atgggaactg aaggctgacg tcagtgtggg
     1681 ctagttcagg acgtcatcgg cgccgggcca gcaggtgtcg cccaggcggc gggtggtgac
     1741 cgtgacgggc acgccctgcg cgccctggtt gaacttgggg tccaggatgc gggcgatctg
     1801 atccttgaga tcgtccaggt gggcctttgc agccttgtcc tttgcggcct tgtcctgggt
     1861 gggcttggcc accagggcct ggagggcctt cagctcggcc cgcaccgcgc cgcgggtgtc
     1921 atcggcggtg ttcacgggca ggaggctgag gcccaggccg cccatggcca cgctgggcgt
     1981 cggcggctgg ttgagcaggt tgccgagcag gtccaggtag gcgcgctgga ggttgcggcg
     2041 gtagggatcc acgcgggatc cgggccgctg cagctcggtg aagatgccgc cgcgcaggtc
     2101 cagcagcagc tggccggcgg aataggcctt gtcgcccagc agggattcct gctcctccag
     2161 gcgggtgagc cgggcccggt ccagcagggt catgaggatg ccgcgctgag ctgccagcag
     2221 ccgcatctgg ccgctgcccg gttccagctt ggcgagcagc gccgggtcga ggatccaggc
     2281 gggcgtcttg aacacggcgc cctgcaggta tttcacggcc tcggcctggc gggcccgggc
     2341 gatgggcgtg aagcggccgc cggactgccc ggcgtgcttg ttctgggtgt caaagccgcc
     2401 cacgagctgg gccacgtgac ccagctcccg gcgccactgg ccccagacgg catcgtagag
     2461 gtgggccagc tcgcggaagt cctggccggg cttcagggcc acctggggca ggtagcccat
     2521 gacgcgctgg aggttcttgg tgcccagggt ggtggcgcc
//
LOCUS       DATGWW010000555         2340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_117397, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000555 DATGWW010000000
VERSION     DATGWW010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117397"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2014)
                     /locus_tag="VK150_08050"
     CDS             complement(<1..2014)
                     /locus_tag="VK150_08050"
                     /inference="COORDINATES: protein motif:HMM:NF040057.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative LPS assembly protein LptD"
                     /protein_id="HLP31299.1"
                     /translation="MGWTGKGSGGLILGTLPVLLAAQGLPDVRPMTPLDAPTPAELLP
                     LRPYQMERGPGASRVPFDWRGERVREAGDIWILEQGAIQAEGLLLLADRIEYRISDGL
                     LVAEGHIRLEGPDLRLRGERLQMDWTRRSGEAWALQMDLPPSWTLRSSHVAFTTLRTW
                     SFDEVALSPCPEEKPGWTAKLSSMKVDLDGFATLWNARVQLGPVPIFYLPYAIYPAQA
                     ERTSGLLPPLLGLSSAFGTRVGLSYYQVLGPTADVTFSPEYLSKEGMLWGGEMRWKPD
                     LTHQGSFSGQSIHQRSLDTQRYRYSLKEVWQREDGWQLTADVNQSSDNLVDADFGRGF
                     GNLGAPNYDSALYLGRSFTFGSLSLSAAEQRSFFFTKDQGDPFYSPDFPASLKRQTLP
                     QGEFRFFPVPVLGPMYLDGGVRLGRFAYRIEGSSAVGDQSYAWDRQDANTRLHGRLGQ
                     WGPFRADLELMGRATHYSSTLSSAVFDPTAGADGTAVNPATSPFQVDGAAATRFLLSS
                     HLRLSGPQVGRNFKDVSILGYKGELKHVAEPYFGLTETSRYGEAGTLPRFDGVDSFPG
                     VNDSASGERSFELGLKQHILGRPGSGHGFADLARFRVATRYHATPIILSDGRYKKGWA
                     SVDTDLDVEPDDRWRISLRRSSDLGAGGSDNALSLDVKARDGGRFNL"
     gene            complement(2022..>2340)
                     /locus_tag="VK150_08055"
     CDS             complement(2022..>2340)
                     /locus_tag="VK150_08055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31300.1"
                     /translation="GILFHRIPEGGTIASIFLVRGFGNRGALMAAGTLALAALVGSAG
                     QSLLNLPTGPILGLTAGLALYVASSDLLPEVQKVSGLRSTVALLSGVGIFLLSARLLP
                     HQH"
BASE COUNT          377 a          773 c          863 g          327 t
ORIGIN      
        1 ccaggttgaa gcggccgcca tcccgggcct tcacgtccag gctgagggcg ttgtccgatc
       61 cgccggcgcc gaggtccgaa gaccgccgca ggctaatgcg ccaacggtcg tccggctcca
      121 cgtccaggtc cgtgtccacg gaggcccagc cctttttgta gcggccgtcg ctcaggatga
      181 tgggggtcgc gtgataccgc gtggccaccc ggaaccgggc caggtccgcg aacccgtggc
      241 ccgagccggg ccgcccgagg atgtgctgct tgaggcccag ctcgaagctc cgctcgccgg
      301 aggcgctgtc gttgacgccc gggaaggaat ccaccccgtc gaaccgaggc aaggtccccg
      361 cttcgccgta acggctggtc tcggtgaggc cgaagtaggg ctccgccaca tgcttgagct
      421 cgcccttgta gccgaggatg gagacgtctt tgaagttccg gcccacctgg ggcccggaga
      481 ggcgcaggtg gctggagagg aggaagcggg tcgcggccgc gccgtccacc tggaagggac
      541 tggtggccgg attcacggcg gtaccgtccg cgccggccgt gggatcgaag accgctgagg
      601 acagggtcga gctgtagtgg gtggcccggc ccatcaactc aaggtcggcc cggaaggggc
      661 cccactggcc cagacggccg tgcaggcgcg tgttggcgtc ctggcggtcc caggcgtagc
      721 tctggtcccc cacggcggag ctgccctcga tgcggtaggc gaagcggcca agccgcacac
      781 cgccatccag gtacatcggc ccgagcaccg gcacggggaa gaagcggaac tcaccctggg
      841 gcagggtctg gcgcttcagg gaggccggga aatcgggact gtagaaggga tcgccctggt
      901 ctttggtgaa gaagaagctg cgctgctcgg cggcggaaag gctgaggctg ccgaaggtga
      961 agctgcgccc caggtagagc gccgaatcgt agttgggcgc gccaaggttg ccgaagcccc
     1021 gtccgaaatc cgcgtccacc aggttgtcgg aggactggtt cacgtccgcc gtgagctgcc
     1081 agccgtcctc ccgctgccag acctccttga gggaatagcg gtaccgctgc gtgtccaggc
     1141 tgcgctgatg gatggactgc cccgagaagc tgccctggtg ggtgaggtcg ggcttccagc
     1201 gcatctcccc accccagagc attccctcct tgctcaggta ctcgggtgag aacgtgacat
     1261 cggcggtggg gcccagaacc tggtagtacg agaggccgac ccgcgtgccg aaggcgctgg
     1321 acagccccaa cagcggcggc agcaggcccg aggtgcgctc ggcctgggcg ggatagatgg
     1381 cgtagggcag gtagaagatc ggcaccggtc ccagctggac ccgggcattc cagagggtgg
     1441 cgaagccgtc gagatcgacc ttcatgctgg agagcttggc ggtccacccg ggcttctcct
     1501 ccgggcaggg actcagggcc acctcgtcga aggaccaggt ccgcagggtg gtgaaggcca
     1561 catggctgga ccgcagggtc cagctggggg gcaggtccat ctggagcgcc caggcctcgc
     1621 cggaacgccg ggtccagtcc atctgcaggc gctcgccccg cagccgcagg tctgggcctt
     1681 ccaggcggat gtggccctcg gcgacgagca gcccgtcgga gatgcggtac tcgatgcggt
     1741 ccgccagcag gagcaggcct tcggcctgga tggcgccctg ttcgaggatc cagatgtcgc
     1801 cggcttcccg cacccgctcg ccccgccagt cgaagggcac ccgggaagca cccggcccgc
     1861 gctccatctg gtaggggcgc aggggcagca gttcggcagg ggtgggagcg tccagcgggg
     1921 tcatgggccg gacgtcaggc aggccctggg ccgccagcag caccggcagg gtgcccagga
     1981 tcagccctcc gctccccttc ccggtccagc ccatgggcgg ctcagtgctg gtgcggcagg
     2041 agccgcgcgc tgaggaggaa gatccccacg ccggagagca gggcgaccgt gctgcgcaga
     2101 ccggacacct tctgcacctc gggcagcagg tcggaactgg ccacgtacag cgccagccca
     2161 gccgtgagcc cgaggatggg gcccgtgggc aggttcagca gcgactggcc ggcggagccc
     2221 accagggccg ccagggccag ggtgcctgcc gccatgagcg cgccgcggtt gccgaagccc
     2281 cgcacgagga agatcgaggc gatggtgccg ccttcgggaa tgcgatggaa caggatcccc
//
LOCUS       DATGWW010000556         5313 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_357217, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000556 DATGWW010000000
VERSION     DATGWW010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5313
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357217"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(165..1160)
                     /locus_tag="VK150_08060"
     CDS             complement(165..1160)
                     /locus_tag="VK150_08060"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLP31301.1"
                     /translation="MNKRTLGINGLNVSALGLGCMGLSFGLGPALDKQEGIALIRAAV
                     ERGVTFFDTAEVYGPWVNEELVGEALAPFKGRVAIATKFGFAIDQVSGQNPGGLNSRP
                     ERIKAVAEASLKRLRVESLDLFYQHRVDPEVPIEDVAGAVKDLIGQGKVKHFGLSEAG
                     VQTIRKAHAVQPVAALQSEYSLFWREPEVEVIPTLEELGIGFVPFSPLGKGFLTGKID
                     ETTTFDPTDFRNVVPRFTPEARKANLALVEVLKALAAAKGSTPAQLALAWLLAQKSWI
                     VPIPGTTKLHRLEENLGGAALALSAEDLKAIDAAASQIELQGDRYPAHLQKLVGR"
     gene            complement(1165..2352)
                     /locus_tag="VK150_08065"
     CDS             complement(1165..2352)
                     /locus_tag="VK150_08065"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLP31302.1"
                     /translation="MSFKSNFEASEASKHLDRRTFLQATGALAATTLGAGLSLPAFGQ
                     DPGGAPVKPRVNGRRKLGKLEVSSIGLGCQDMTGTFYGTAPRRADMIALIHTAYDRGV
                     TFFDAAEAYGPHEVERILGEGVAPFRNQVVIATKFGWDIDQETGKRLGLQNSRPDHIR
                     RVVEGMLKRLKTDRIDLLYQHRVDPKVPIEDVAGTVKDLIAQGKVLHFGLSEPGPGTL
                     RRAHAVQPVTAVQNEYSMMVRDPEATILPICKELGIGFVPWSPLAMGFLTGGIGLETA
                     FAPGDFRGMVPWFTPENRPHNLKLVEVVKEWARRKGATPAQIALAWLMAQDPCVVPIP
                     GTTKMAHLLDNLGADGVRFTPKEHAELNAAMARVPIHGARLPAGILAMSGVEAPLKRS
                     TAE"
     gene            complement(2422..3417)
                     /locus_tag="VK150_08070"
     CDS             complement(2422..3417)
                     /locus_tag="VK150_08070"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLP31303.1"
                     /translation="MQTRKLGGSNLEVSALGLGCMSMSSGYGPAGDPQQMISLIRSAV
                     DKGVTFFDTAEVYGPYVNEELVGEALAPFKGKVVIATKFGFDLDPVSQQRTGGVNSRP
                     DHVKAVAEASLKRLRVETIDLFYQHRVDPQVPIEDVAGAVKDLIQQGKVRHFGLSEAG
                     AQTIRRAHAVQPVTALQSEYSLFWREPEVEVIPTLEELGIGFVPFSPLGAGFLTGKID
                     ETTTFDPTDFRNSVPRFSPEARKANLALVEIIRSVAVRKGATPAQIALAWLLAQKPWI
                     VPIPGTTKQPRLEENLGGAAIRLGPDDLQVIELAAAKISLQGARLPEAALKMTGR"
     gene            complement(3462..4001)
                     /locus_tag="VK150_08075"
     CDS             complement(3462..4001)
                     /locus_tag="VK150_08075"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HLP31304.1"
                     /translation="MGKKVLILSSSPRKGGNSDTLCDRFLAGALEGGHAAEKVFLKDK
                     TIGYCTGCGACTKGTKTCSQKDDMAKLLDQMVHADVIVMATPVYFYTMAAQMKTLIDR
                     TCARYQEISGREFYFILAAADGHKKAMHRTLEGFRGFTSCLDGAQEKGVVYGTSAWEV
                     GDIKGSPALKEAYQMGLSL"
     gene            complement(4009..5064)
                     /locus_tag="VK150_08080"
     CDS             complement(4009..5064)
                     /locus_tag="VK150_08080"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HLP31305.1"
                     /translation="MPLNALGYAAQSATAELAPFHFERRDARPDDVVIDILYCGVCHS
                     DLHTARNDWGWTTYPIVPGHEIIGRVREVGAQVTRFKVGDAVGVGCMVDSCRHCKPCE
                     KGEEQYCKEGSTFTYGGQDRHDRTTTQGGYSDQIVVSDRFVLKVPDGLDLKGAAPLLC
                     AGITTWSPLRHWKVGPGSQVAVVGLGGLGHMGLKLAKALGAEVTLFTRSKGKEADARR
                     LGADHIVLSTDPARMAAVADRFDLILDTVPYVHDLNPYIPTLASSGTLVLVGYLGGLE
                     PLLNTTPMVLGRKSVAGSLIGGTKETQEMLDFCGEHGIVSDVEMIRVQEINAAYERLL
                     KGDVKYRFVLDLASLKA"
BASE COUNT          864 a         1699 c         1790 g          960 t
ORIGIN      
        1 ggtgaaccac tcggccggac ctctggccga gggttgggtc ccgttcctga ggatctcgat
       61 ggttccgggt atcggctttg gctccggaga tgccgcccat cctgccaggc aggctgggag
      121 gcaaagcgcg gcttggcaga aggatcgcga cctggccatg gcgctcagcg ccccaccagc
      181 ttctgcaggt gcgctgggta gcggtccccc tgcagctcga tctgcgaggc ggcggcgtca
      241 atggctttca gatcctcggc gctgagtgcg agggccgcgc ctcccaggtt ctcctcgagc
      301 cgatgcagct tggtggtgcc cggaatggga acgatccagg acttctgggc cagcagccag
      361 gccaaggcga gctgcgcggg cgtggaaccc ttcgccgcgg cgagggcctt gagcacctcg
      421 accagggcga ggttcgcctt gcgggcctcg ggcgtgaagc gcggaacgac gttgcggaag
      481 tctgtcggat cgaaggtggt ggtctcgtca attttcccgg tgaggaagcc cttgcccagg
      541 gggctgaagg ggacgaagcc gatgccaagt tcttccaggg tggggatgac ctccacctcc
      601 ggctcccgcc agaacagcga atactcgctc tggagggcag ccaccggctg gacggcgtgg
      661 gccttccgga tggtctgcac gcccgcttcc gacaggccga agtgcttgac cttgccctgc
      721 ccgatgaggt ctttcacggc gcccgccaca tcctcgatgg gcacctcggg atccacccgg
      781 tgctggtaga agaggtcgag gctctccacc cgcaggcgct tcaaggaggc ctccgccacg
      841 gccttgatgc gctcgggacg gctgttcagg ccgcccggat tctggccgct cacctggtca
      901 atggcgaagc cgaacttggt ggcgatggcc acccgaccct tgaagggcgc cagggcctcg
      961 cccaccagct cctcgttcac ccaaggccca tagacttcgg ccgtgtcgaa aaaggtgacg
     1021 cccctctcca ccgcggcccg gatgagggcg atgccctcct gtttgtcgag ggccgggccg
     1081 aggccgaagc tcaggcccat gcagcccagg ccgagggcgg atacgttgag gccgttgata
     1141 ccaagggttc gcttattcat ggggttactc cgctgtactg cgtttgagag gggcctccac
     1201 tccagacatg gcgaggatgc ctgcgggcag gcgggccccg tggatgggga cccgggccat
     1261 ggccgcattc agttccgcat gctccttggg cgtgaagcga acaccgtcag ccccgaggtt
     1321 gtccagcagg tgcgccatct tggtggtccc ggggatgggt acgacacaag ggtcctgggc
     1381 catcagccag gccagtgcga tctgggcggg cgtcgcgcct ttgcgtcggg cccattcctt
     1441 gacgacttcg accagcttga ggttgtgggg gcggttttcg ggcgtgaacc aggggaccat
     1501 tccccggaag tcgccggggg caaaggctgt ctccaggcca atgccgccgg tcaggaagcc
     1561 catcgcgagc gggctccagg gcacgaaccc gatgccgagt tccttgcaga tcggcaggat
     1621 cgtggcctct gggtcccgca ccatcatgga gtattcgttc tggacagcgg tcacgggctg
     1681 gactgcatgg gcccggcgga gggtgccggg gccaggttcg gagagcccga aatgcagcac
     1741 cttgccctgg gcgatcagat ccttgacggt gcccgccaca tcctcgatgg ggaccttggg
     1801 atcgacccgg tgctggtaga gcaggtcgat gcgatccgtt ttcaggcgct tcagcatccc
     1861 ctcaaccacc cgccgaatgt gatcgggccg actgttctgg agccccagcc gcttgccggt
     1921 ttcctgatca atgtcccacc cgaacttggt ggcgatcacc acctggtttc ggaagggcgc
     1981 aaccccctcg cccaggatcc gttccacctc gtggggacca taggcctcgg cggcgtcgaa
     2041 gaaggtgact ccccggtcgt aggccgtgtg gatcagggca atcatgtcgg cccggcgagg
     2101 ggccgtaccg tagaaggtgc cggtcatgtc ctggcagcca agcccaatgc tggagacctc
     2161 cagcttcccg agcttccgcc gcccgttcac ccgaggcttg acgggtgcgc cgccggggtc
     2221 ctggccaaaa gctggcaggg aaaggccggc acccagagtc gtggcagcca gggccccggt
     2281 cgcctgcaga aaggtgcgac ggtccagatg cttgctcgct tctgaggctt cgaagttgct
     2341 tttgaacgac atggtgtcca ctcctggttg ggggtcaaac gctggtggga aggtctatcc
     2401 aagtgcgact tcctagaggt gtcatcggcc agtcattttc aacgccgcct ccggaagccg
     2461 ggctccctgc aagctgatct tcgctgctgc caactcgatc acctgtaggt cgtcaggacc
     2521 aagccggatg gccgctcccc cgagattctc ttcaagtcgt ggctgcttgg tggtgccagg
     2581 gatcggcacg atccagggct tctgcgccag aagccaggcc agcgcgattt gcgctggcgt
     2641 cgcgcccttg cgcacggcga ccgaacggat gatctcgacc aaggcgaggt tcgccttgcg
     2701 ggcctccgga ctgaaccggg gaacggaatt ccggaagtcc gtgggatcga aggtcgtggt
     2761 ttcgtcgatc ttccccgtga ggaagcctgc acccaggggg ctgaagggaa caaagccgat
     2821 gccgagttct tcaagggtgg ggatgacctc cacttccggc tcccgccaga acagggagta
     2881 ttcgctctgg agggcggtca caggctggac ggcatgggcc cggcggatgg tttgcgcgcc
     2941 cgcctcggag aggccgaagt gcctgacctt gccctgctgg atgaggtcct tcaccgcacc
     3001 agccacgtcc tcgatgggga cctgaggatc cacccggtgc tggtagaaca ggtcaatggt
     3061 ctcgacccgg aggcgcttca gggaggcttc cgccacggcc ttgacgtggt cggggcggct
     3121 gttcacccct cccgtgcgct gctggctcac cgggtccagg tcaaaaccga atttggtggc
     3181 gatgaccact ttgcccttga agggagccaa ggcctccccg acgagttcct cgttcacata
     3241 ggggccatag acctcggcgg tatcgaagaa ggtgacgccc ttgtccacgg cggaccggat
     3301 caaggagatc atctgctggg gatctcccgc cggaccgtat cccgagctca tgctcatgca
     3361 gcccagtccg agcgcggaga cctcaaggtt gctgccgccg agtttgcgag tctgcatggt
     3421 gtcctccttg tagctggctg atgtgggatg ctgaaccctg gctagagtga aaggcccatc
     3481 tggtaggcct ctttcagggc tgggctgccc ttgatgtccc ccacttccca ggcgctcgtg
     3541 ccgtagacga cgcccttctc ctgcgccccg tcgaggcagg aggtgaagcc cctgaaccct
     3601 tcgagggtgc ggtgcatcgc cttcttgtgg ccatcggcag cggccaggat gaagtagaac
     3661 tccctgccgg agatctcctg gtagcgggcg caggtgcggt caatgagggt cttcatctgc
     3721 gcggccatgg tgtagaagta gaccggcgtg gccatgacga tgacatcggc gtggaccatc
     3781 tggtcgagca gcttcgccat gtcgtccttc tgggagcacg tcttcgtccc cttggtgcag
     3841 gcgccgcagc cggtgcagta gccgatggtc ttgtctttga ggaagacctt ctcggcggca
     3901 tggccaccct ccagcgcccc cgcgaggaag cggtcgcaga gggtgtccga gttgccgccc
     3961 ttccgggggc tggaggacag gatgagcacc ttcttcccca tggccgcctc aggctttcag
     4021 ggaggccagg tcgagcacga agcggtactt cacatcgccc ttcagcaggc gttcgtaggc
     4081 ggcgttgatc tcctgcacgc ggatcatttc cacgtcggag acgatgccgt gctcgccgca
     4141 gaaatccagc atctcctggg tctccttggt gccgccgatg agggaccccg ccacggactt
     4201 ccgcccgagg accatgggcg tggtgttcag caggggctca agaccgccca ggtagcccac
     4261 cagcaccagg gtgccgctgg aggccagggt cgggatgtag gggttcaggt cgtggacgta
     4321 gggaaccgtg tcgaggatca gatcaaagcg gtccgcgacg gcggccatcc gagcgggatc
     4381 tgtggacagc acgatgtggt ccgcgcccag gcggcgggca tcggcctcct tacccttgga
     4441 gcgggtgaag agcgtcacct cggcgcccag ggccttggcc agcttcaggc ccatgtggcc
     4501 caggccgccg agacccacca cggccacctg gctgcccggg cccaccttcc agtgccgcag
     4561 gggcgaccag gtggtgatgc ccgcgcagag caggggcgcg gcgcccttca agtccaggcc
     4621 atcgggaacc ttcagcacga agcggtcgga caccacgatc tggtccgagt agccgccctg
     4681 ggtcgtggtg cggtcgtggc gatcctggcc gccataggtg aaggtggagc cttccttgca
     4741 gtactgctcc tcgcccttct cgcagggctt gcagtgacgg caggaatcca ccatgcaacc
     4801 cacgcccacg gcgtcgccga ccttgaaacg ggtcacctgg gcgcccactt cgcggacgcg
     4861 gccgatgatc tcgtggccgg ggacgatggg gtacgtggtc caaccccagt cgttccgggc
     4921 ggtgtgcagg tccgagtggc agacgccgca gtagaggatg tcgatgacca cgtcgtccgg
     4981 gcgtgcgtcg cgccgttcga aatggaatgg ggccagctcc gcggtggcgg actgcgcggc
     5041 gtagccgagg gcattcaagg gcatggttcc tccggtaccg ggtcgatcct cgaccaccgg
     5101 tcacagatgg aagtctagga aacggcccag gccccggctt gcccattcct ctggaatcct
     5161 tacccaatcc tgcagacgat cgaccggggt tccatcacct gcgggcggat cccggcgatc
     5221 ggcatgcgca gaacccttta cggatggaag gcatggcggg gcctctccga cctgctcccg
     5281 acgcgacatc cagtcgcgtc ctccacctcc cac
//
LOCUS       DATGWW010000557         1817 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_267935, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000557 DATGWW010000000
VERSION     DATGWW010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267935"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..191)
                     /locus_tag="VK150_08085"
     CDS             complement(<1..191)
                     /locus_tag="VK150_08085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31306.1"
                     /translation="MGYIASIVALPEYRMKVLKSFLLGATAGLVLAVALAVGAYVSPL
                     RETLYLDFDPEIAALRERL"
     gene            257..868
                     /locus_tag="VK150_08090"
     CDS             257..868
                     /locus_tag="VK150_08090"
                     /inference="COORDINATES: protein motif:HMM:NF012708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HLP31307.1"
                     /translation="MAKIVIRCQNQILGEQPLRAGFTAIGRLPTHPICIENLGISRNH
                     AFILGDIDEKVFILEDLQSLNGTYVNKKRVQKYLLKNNDVITIGQHALEYIDEDFRAK
                     EPLGDSGLGPYLEALDSGKRITLVKESTYFGNSSSDDVHISNLMVGKQFASINRKGTA
                     WVINLLVKRFSNLKVNGEEVQSTRLKNGDEIEVGGVRFRFHLP"
     gene            complement(963..1466)
                     /gene="ispF"
                     /locus_tag="VK150_08095"
     CDS             complement(963..1466)
                     /gene="ispF"
                     /locus_tag="VK150_08095"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF014588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HLP31308.1"
                     /translation="MIKVGIGQDSHRIQEPAAGKSLVLGGVTLAEAYALEGNSDSDVV
                     LHAVTNAISGITGKPILGPVADKLCKAGQKDSAVYLQKALEDLDAMGYRLSHVSVSLE
                     CARPKILPIIPAMTARLSELTGLSFEDIAFTATTGEGLTDFGKGLGIQGLAVATAFRI
                     GSSLEQG"
     gene            complement(1477..>1817)
                     /locus_tag="VK150_08100"
     CDS             complement(1477..>1817)
                     /locus_tag="VK150_08100"
                     /inference="COORDINATES: protein motif:HMM:NF013308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070567 - cytidylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HLP31309.1"
                     /translation="VAPDACVLAALPATDTVKEADGPRVSRTLDRSRIVLAQTPQVFP
                     RKALEAMHAADWSDRTPTDEASMAELTGWPVRWVRGADMNRKVTGSADLAWAAWMAQR
                     LEAGETLPDA"
BASE COUNT          356 a          578 c          585 g          298 t
ORIGIN      
        1 tcaagccttt cccgaagagc cgcgatctcc ggatcgaagt cgaggtagag cgtctcgcgc
       61 aaaggcgaaa cataggcgcc cacggcgaga gcgaccgcga ggaccaggcc ggcggtggcc
      121 ccgaggagaa atgatttcaa aaccttcatg cggtattcgg gaagtgctac aatactagca
      181 atatatccca acccaactcc agtcccatca aaggcttgga aaagggccca gggagggtta
      241 ttttcggggt ccgaccatgg cgaaaatcgt catccgatgc caaaaccaaa ttctcggcga
      301 acagccgctc cgagcgggct tcaccgccat cgggcgactg cccactcatc ccatctgcat
      361 cgagaacctg ggcatctccc gcaaccacgc cttcattctg ggagacatcg acgaaaaggt
      421 gttcatcctc gaggatctcc aaagcctcaa cggcacctat gtcaataaga agcgggttca
      481 gaagtacctg ctcaagaaca acgacgtcat caccatcggc cagcacgccc tcgagtatat
      541 cgacgaggac ttccgcgcca aggagcctct cggagattcg gggctcgggc cctacctgga
      601 ggccttggac tcgggcaaac ggatcaccct ggtgaaggag agcacctact tcggcaacag
      661 cagctcggac gatgtccaca tctccaatct catggtgggc aagcagttcg cgtccattaa
      721 tcgcaaggga acagcctggg tcatcaacct gctcgtgaag cgcttctcca acctcaaggt
      781 gaacggggag gaggtgcagt caactcgcct caagaacggg gatgagatcg aggtgggtgg
      841 ggtgcggttc cggttccact tgccttaaga tcccgcgagg tcgctgctcc gggggcggcg
      901 ggaagcggga aggcggctcc ggacgcgcaa gaagctgaac ctcgcctcgg ggcgaagccc
      961 gctcagcctt gttccaacga ggaaccgatg cggaaggccg tggccacggc gaggccctga
     1021 atgcccaggc ccttgccgaa gtcggtgaga ccctcgcccg tcgtcgccgt gaaggcgatg
     1081 tcctcaaagg agaggcccgt gagctcggag aggcgggcgg tcatggccgg gatgatgggc
     1141 aggatcttcg ggcgggcgca ttccaggctc acagagacgt gactcaggcg ataccccatg
     1201 gcgtccaggt cctccagggc cttctgcaag tagaccgcgc tgtccttctg ccccgccttg
     1261 cacagcttgt cggcgaccgg gcccaagatg ggcttgccgg tgatgccgga gatggcgttg
     1321 gtcaccgcgt ggagcaccac gtcggagtcg ctgttgccct cgagggcgta agcctcggcg
     1381 agggtgaccc cgcccagcac cagggacttg cccgcggcgg gctcctggat acggtggctg
     1441 tcctgtccga tgccgacctt gatcatggcg tcctcctcat gcgtcgggaa gggtttcccc
     1501 cgcctccagg cgctgggcca tccacgcggc ccaggcgaga tcggcggatc cggtaacctt
     1561 gcggttcatg tccgcgccgc gcacccaccg caccggccaa cccgtgagct ccgccatgga
     1621 ggcttcgtcc gtgggcgtcc ggtccgacca gtccgcggcg tgcatggcct ccagggcctt
     1681 gcgcggaaac acctgcggcg tctgcgccag gacaatgcgg gagcgatcga gggtacggga
     1741 gacccggggg ccgtccgcct ccttcacggt gtcggtggcc ggcagggccg cgagcacgca
     1801 ggcgtccggg gcgacaa
//
LOCUS       DATGWW010000558         2966 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_316601, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000558 DATGWW010000000
VERSION     DATGWW010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2966
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316601"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..891)
                     /gene="folD"
                     /locus_tag="VK150_08105"
     CDS             complement(<1..891)
                     /gene="folD"
                     /locus_tag="VK150_08105"
                     /inference="COORDINATES: protein motif:HMM:NF010783.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HLP31310.1"
                     /translation="MATILDGKAHADRMLEAVRLGVEGRVAQGRRAPALAVVLVGDDP
                     ASHVYVRNKSAACAKVGITSIEHRLPADTPQADLDALIDRLNADLAVDGILVQLPLPK
                     GLDSKRALHRISPAKDVDGFHPVNQGLLLEGLPGLRPCTPSACMSLLAHHGVALKGIR
                     AVVLGRSEIVGKPMALMLLEQHATVTIAHSRTRDLPAVCREADLLVAAVGRPGLVEGS
                     WIKPGAVVVDVGINRVEDPALGERIFAAEPKKLETLHAKGGVLCGDVRFGEAMQVASA
                     VTPVPGGVGPLTIAGLLTNTL"
     gene            1252..1821
                     /locus_tag="VK150_08110"
     CDS             1252..1821
                     /locus_tag="VK150_08110"
                     /inference="COORDINATES: protein motif:HMM:NF014617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HLP31311.1"
                     /translation="MDLKKAQPALERQLALLGYELVHLETVREGRDEMLRLYIDHLDA
                     ETSHRKVTLEDCTAAHEGLLLWMDVEFPDLREKLGVEVSSPGMERPLVKADHFRRFAG
                     RLCRVQTAAPINGQKRFKGWIGPVEAGVVTLEEDGVLKTIPVEAIQKARLAPFDEEKT
                     PRPKHLTAKLTDVPDADGVETSAAEEEEA"
     gene            1823..>2966
                     /gene="nusA"
                     /locus_tag="VK150_08115"
     CDS             1823..>2966
                     /gene="nusA"
                     /locus_tag="VK150_08115"
                     /inference="COORDINATES: protein motif:HMM:TIGR01953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HLP31312.1"
                     /translation="MANVATTFFDSVKMIAAEKGINEEDVFAAVEEALAKAADKYFNA
                     QDFYGNFQAQMDRETGEFHVYALKQVVAEVEEEDLEISLAEAQELNPDAAEGDTLWLP
                     QDTSQLGRIAAQAAKQVLVQKVREAERERIFTEFADRIGEVVVAEVKRFEKSAIILEI
                     DRVESMLRRSEALRGDRFDKGQRIKVVIVSVDRSAKDPQVQVSRTDPRLLIKLFENEV
                     PEIHDGTVVIRNCVREAGDRAKVAVHSLDPDVDPVGACVGLKGSRVQAIIRELKNEKI
                     DIVRYSDDAAQFIANALNPAKAIRVNLVDPEGRRVEVVVDDEQLSVAIGKRGQNVRLA
                     AKLTGWNIDVRSEADKRREAEVAMGLALPAAEEANAPEGEAATPAST"
BASE COUNT          515 a         1073 c          973 g          405 t
ORIGIN      
        1 cagcgtgttc gtcagcagcc ccgcgatggt gaggggcccc acgccgccgg gcaccggcgt
       61 cacggccgag gccacctgca tggcctcgcc gaagcgcacg tcgccgcaga gcacgccgcc
      121 cttggcatgg agcgtctcca gcttcttggg ttccgccgcg aagatccgct cacccaaggc
      181 gggatcctcc acccggttga tgcccacgtc caccaccacg gcgccgggct tgatccacga
      241 cccctccacc aggcccggac ggcccacggc ggccaccagc aggtcggctt cccggcagac
      301 cgcgggcagg tcccgcgtgc ggctgtgggc gatggtcacg gtggcgtgct gttccagcag
      361 catgagggcc atgggcttgc ccacgatctc gctgcggccc agaaccacgg cccggatgcc
      421 cttgagggcc acgccgtggt gggccagcag ggacatgcag gcgctggggg tgcagggccg
      481 caggcccggc aggccctcga gcagcaggcc ctggttcacg ggatggaagc cgtccacgtc
      541 cttggcaggg ctgatgcggt gcagggcccg cttggaatcc aggcccttgg gcaggggcag
      601 ctgcaccagg atgccgtcca ccgccaggtc ggcgttcagc cggtcgatca gcgcgtccag
      661 gtccgcctgg ggcgtgtcgg cgggcagccg gtgctcgatg gaggtgatcc ccaccttggc
      721 gcaggccgcg ctcttgttgc ggacgtagac gtgactggcc ggatcatcgc ccaccagcac
      781 caccgccagg gccggcgcgc gccgcccctg ggccacccga ccctcgaccc ccagccgcac
      841 cgcctccagc atgcggtccg cgtgcgcctt gccgtccagg atcgtggcca tgagtccccc
      901 cctcccattg aatcccagcc cgcctgtggc ccccatcaag tttttgacgc ccgcccccca
      961 ggggcatgcg cgaagcgcag aacccccagg ggtcccagcg aggcacggct ccgccgggcc
     1021 aagcgcaacc tccccgaagg atcaagcagt cgcacggctc cgccgggccg ctgcgcgggg
     1081 gcccgggggt gtgcgcgcag cgcggaaccc ccggacttta ttaaccatcc ttgagattcc
     1141 tggccaggag ggctagactg ataagtcaat tcggccatgg cgtcccgttc ccgggtgcca
     1201 agactgggtg ggttcggccc accttttttg ttgtcccccc ctggagtgtc cttggatctg
     1261 aagaaagccc agcccgccct cgaacgccag ctggccctgc tgggctacga gctggtgcac
     1321 ctggagaccg tccgcgaagg ccgcgacgag atgctgcgcc tctacatcga tcacctggac
     1381 gccgagacca gccaccgcaa ggtcaccctg gaagactgca ccgccgccca cgagggactg
     1441 ctgctgtgga tggacgtcga attccccgac ctgcgcgaaa agctcggcgt cgaggtgagc
     1501 agccccggca tggagcgccc cctcgtcaag gccgaccact tccgccgctt cgccggccgg
     1561 ctctgccgcg tgcagaccgc cgcgcccatc aacggccaga agcgcttcaa gggctggatc
     1621 ggccccgtgg aagccggcgt cgtcaccctc gaggaggacg gcgttctcaa gaccattccc
     1681 gtcgaggcca tccagaaggc ccggctggcg ccctttgacg aagagaagac cccgcggccc
     1741 aagcacctga ccgcaaagct gaccgatgtt cccgatgccg acggcgtaga gacaagcgcc
     1801 gccgaagaag aggaggcctg agatggcgaa cgtggcaacg acctttttcg acagcgtgaa
     1861 gatgatcgcc gctgagaagg gcatcaacga agaagatgtc ttcgcggcgg tggaagaggc
     1921 cctggccaag gccgcggaca aatacttcaa cgcccaggat ttctacggca acttccaggc
     1981 ccagatggac cgggagaccg gcgagttcca tgtctacgcc ctcaagcagg tcgtggccga
     2041 ggtcgaggag gaggatctcg agatcagcct ggccgaagcc caggagctga atcccgacgc
     2101 cgccgagggc gacaccctct ggctgcccca ggacaccagc cagctgggcc gcatcgccgc
     2161 ccaggccgcc aagcaggtgc tcgtgcagaa ggtccgcgag gccgagcgtg agcgcatctt
     2221 caccgagttc gccgaccgca tcggcgaggt ggtggtggcc gaggtcaagc gcttcgagaa
     2281 gagcgccatc atcctcgaga tcgaccgcgt ggagtccatg ctccgccgca gcgaagccct
     2341 ccgcggcgac cgtttcgaca agggccagcg catcaaggtt gtcatcgtca gcgtcgaccg
     2401 cagcgcgaag gatccccagg tccaggtcag ccgcaccgat ccgcggctgc tcatcaagct
     2461 cttcgagaac gaggtgcccg agatccacga cggcaccgtg gtcatccgca actgcgtccg
     2521 cgaggcgggc gaccgagcca aggtggccgt ccacagcctc gaccccgacg tcgatcccgt
     2581 gggcgcctgc gtgggcctca agggcagccg cgtccaggcc atcatccgcg agctcaagaa
     2641 cgagaagatc gacatcgtcc gctactcgga cgacgccgcg cagttcatcg ccaacgccct
     2701 gaaccccgcc aaggccatcc gcgtgaacct cgtggatccc gagggccgcc gcgtcgaggt
     2761 ggtggtggac gacgagcagc tgagcgtcgc catcggcaag cgcggccaga acgtgcgcct
     2821 cgcggccaag ctcaccggct ggaacatcga cgtccgcagc gaggccgaca agcgccgcga
     2881 agccgaagtc gccatgggtc tcgccctgcc tgccgccgag gaggccaacg cccccgaggg
     2941 cgaggctgcc acccccgcgt ccaccc
//
LOCUS       DATGWW010000559         4137 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_316886, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000559 DATGWW010000000
VERSION     DATGWW010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4137
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316886"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1074)
                     /locus_tag="VK150_08120"
     CDS             complement(<1..1074)
                     /locus_tag="VK150_08120"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLP31313.1"
                     /translation="MPPRLLASLLLLGFASGLPLFLTGSTLKAWMTDEGLSLATIGLF
                     SFVTLPYSLKVFWAPFLDRFALPGLGRRRGWMMLMQLGMALALAALAFTQPHLDLQRV
                     VVLALAVAVTSATFDIAVDAWRAEALDAKHLGLGNSLHIATYRVAMLVSGGLALILAQ
                     TLGWRATYLGMALLTLLGMAGTWLAANTDGAAKPPRTLQDAIVGPLKDLLSRKGIGYL
                     LAFAVFYKLGDWLAESMTIPFLLRGMAFSKMEIGFVQKTTAMVAIILGGLLGGWMLTR
                     MSLRKALWICGFVQAGSILGFWAISLLGRHLPLLVAANTLENLAYGMGGSAFAALLMG
                     ACNRSYTGTQYALFSALMALPRTL"
     gene            complement(1152..1637)
                     /locus_tag="VK150_08125"
     CDS             complement(1152..1637)
                     /locus_tag="VK150_08125"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HLP31314.1"
                     /translation="MPPWNHLHPALVHFPIALLLVAPLLVAAGLAWPAQRRGLHTAAL
                     ILLGLGFAGLVLALLSGEAVTRYARATADLQAGVRDHELAAQWTTLLFAGICPAFAVL
                     WALPLLRKRPLARALDLGLMALWLLLATAGALALARTAHAGGHLVHDLHTHAAPEPRV
                     E"
     gene            1802..2608
                     /locus_tag="VK150_08130"
     CDS             1802..2608
                     /locus_tag="VK150_08130"
                     /inference="COORDINATES: protein motif:HMM:NF040196.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5777 family beta-barrel protein"
                     /protein_id="HLP31315.1"
                     /translation="MRFRPAPRVLGLLACLLAPAALAQEAAQESEVPLGLSLPTASMV
                     EGWRPAIRFTHRFTEPARGHSKDLFGLDGGNYAGFGLDLGIGALPGLNAQIYRTADNK
                     TLVLALQQRLLAGPRLRASLRVERFDEGVERTVLPGGTLGITGVAAQLPVEAPLGSVT
                     FRLVPTWLSRTSTQDKGLLTAGAGLTWAFLEGHAILGEVYPRPARLDSTRYEPGYGLG
                     YRYATRGHRFTLLATTATGTTAHQVLGGDYAGGPRHAGDWTLGFNLVRMF"
     gene            complement(2884..>4137)
                     /locus_tag="VK150_08135"
     CDS             complement(2884..>4137)
                     /locus_tag="VK150_08135"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLP31316.1"
                     /translation="VHRRGSRPGDEPVTFASEREKDFYDIQQGREIHCEPEMVDAEHP
                     LFILYTSGTTGKPKGVVHATGGYLVGVNYLSKAFYQIQERDIYWSTSDIGWVVGHSFI
                     VYGPLSIGATVLCREGAPDYPSPEVTWEICERFGVNVMFTAPTAVRMWMSHGAEAPGK
                     FDLSKLRLMACAGEPLNPEAHRWAQQHLVGQGNGMVVDNWWQTEIAGPVIGTLPTFEA
                     RPGKAGKPMPGAQMAVVNRDGSPVPDGQGGLLVIKFPLPYMLRTVWNDPKRYEDYWKD
                     IPGCYSAGDVAVKDADGYIAVLGRADDVLNVAGHRIGTADVEGSLIRHPAVAESAVVG
                     IPDPIKGESIKAFVVVKAGVSTGPGLIASLKDHVREDLGGIATPADIEIRASLPKTRS
                     GKIVRRALKAEAMGQDPGDLSTLAD"
BASE COUNT          601 a         1468 c         1476 g          592 t
ORIGIN      
        1 gagcgtgcgc ggcagggcca tgagggcgct gaagagcgcg tactgggtgc cggtgtagct
       61 gcggttgcag gcgcccatga gcagagccgc gaaggcgctg ccgcccatgc cgtacgccag
      121 attctccagc gtgttcgccg ccaccagcag gggcaggtgg cgccccagca gcgagatggc
      181 ccagaacccc aggatgctgc ccgcctgtac gaacccacag atccagagcg ccttccgcag
      241 gctcatgcgg gtgagcatcc agcccccgag cagcccgccc aggatgatgg ccaccatggc
      301 cgtggtcttc tggacgaagc cgatctccat cttggagaac gccatccccc gcaggaggaa
      361 tgggatggtc atggactccg ccagccagtc gccgagcttg tagaacacgg cgaaggccag
      421 gaggtagccg atgcccttcc ttgagaggag gtccttcagg ggacccacga tggcatcctg
      481 gagggtgcgg gggggcttcg ccgccccgtc cgtgttcgcc gcgagccagg tgccggccat
      541 gcccaggagg gtgagcaggg ccatgccgag gtacgtggcc cgccagccga gggtctgggc
      601 gaggatcagg gcgaggccgc cgctcaccag catggccacg cggtacgtgg cgatgtggag
      661 gctgttgccg aggcccaggt gcttcgcgtc gagcgcctcg gcccgccagg catccacggc
      721 gatgtcgaag gtcgcgctgg tgacggccac cgccagtgcc agcaccacca cccgctgcag
      781 gtcgaggtgg ggctgggtga aggcgagcgc ggcgagggcc agggccatgc cgagctgcat
      841 gagcatcatc cagccccggc gccggcccag gcctggcagg gcgaagcgat ccaggaaggg
      901 cgcccagaag accttcaggc tgtagggcag cgtcacgaag ctgaagagcc cgatggtggc
      961 gaggctcagc ccctcgtccg tcatccaggc cttgagcgtg gatccggtga ggaagagcgg
     1021 aaggcccgag gcgaatccga ggagcagcag cgaggcgagg aggcgcggag gcatgggaga
     1081 tggtaacggg tgcgccgcct tcccgcccct gcttccatcc gccctccacg cctgccactg
     1141 acctccgccc ttcactccac gcgtggctcc ggggccgcgt gcgtgtgcag gtcgtgcacc
     1201 aggtgtccgc cggcgtgggc cgtgcgcgcc agtgccagtg cgcccgccgt cgcgagcagg
     1261 agccacagcg ccatgaggcc caggtccagg gcccgggcca ggggccgctt gcgcagcagc
     1321 ggcagggccc agagcaccgc gaaggccggg cagatcccgg cgaacagcag ggtcgtccac
     1381 tgggccgcca gctcatggtc gcgcacgccg gcctgcaggt ccgccgtggc ccgggcgtag
     1441 cgggtcaccg cctcgccgct gagcagggcc agcacgagcc cggcaaaacc gaggcccagc
     1501 aggatcagcg ccgcggtgtg caggccccgg cgctgggcgg gccaggccag gcccgccgcc
     1561 accagcagtg gcgcgaccag cagcagggcg atggggaaat ggaccagggc tgggtgcagg
     1621 tggttccagg gtggcatggg ccctccggtg atgcgggacg ggggaagtgc cccgaggatg
     1681 gggccgatcc gggtcccgcg gaagcccgga ggggtcggga atccggaacc ggatctggga
     1741 ggccggtggc accggatcca tcgtggcgaa ggtccccctc ccaccttctt ccggagtctc
     1801 cgtgcgcttc cgccccgccc cccgtgttct cggcctcctc gcctgcctgc tggcgccggc
     1861 cgccctggcc caggaggccg cccaggaatc cgaggtgccc ctgggcctca gcttgcccac
     1921 cgcctcgatg gtcgagggtt ggcggcccgc gatccggttc acgcaccggt tcacggagcc
     1981 ggcccggggc cactcgaagg acctgtttgg cctggacggc ggcaactacg cgggcttcgg
     2041 cctcgacctg ggcatcggcg ccctccccgg cctcaacgcc cagatctacc gcaccgcgga
     2101 caacaagacc ctggtgctgg cgctccagca gcggcttctc gcgggaccgc gcctgcgggc
     2161 gtccctgcgg gtggagcgct tcgacgaggg tgtggagcgc acagtgcttc ccggcggcac
     2221 cctcggcatc accggggtgg ccgctcagct ccccgtggag gcccccctgg gatccgtgac
     2281 cttccgcctc gtgcccacct ggctctcccg cacctccacc caggacaagg gcctgctcac
     2341 cgccggggcg ggcctcacct gggccttcct ggagggtcac gcgatcctgg gcgaggtcta
     2401 tccgcgcccc gccaggctcg actcgacccg ctacgaaccc ggctatggcc tgggctaccg
     2461 ctacgccacc cggggccacc gcttcaccct gctcgccacg acggccaccg gcaccaccgc
     2521 ccaccaggtg ctgggcggcg actacgcggg cggcccgcgc cacgccggcg actggaccct
     2581 ggggttcaac ctggtgcgga tgttctgagg gcgtgtcgcg ttcgatcgcc aaggatccac
     2641 caccgaggcg cggagtcccc agagatggca ccgaggcatc cgtgttccac ccaccggcct
     2701 cgccgggact acgcgtgggg gtccaggggg tgtgcgcgcg gcgaagcgaa gcgcgaccct
     2761 agatcctcgc aacgcatgcg ttgcggggag aacccccgaa cgagcatcaa gcgaggcacg
     2821 gctctgccgg gccgagcgcg ggggcccggg ggtgtgcgcg cagcgcgaaa cccccggaca
     2881 atttcaatcc gccagcgtgc tcaggtcgcc gggatcctgg cccatggctt cggccttcag
     2941 ggcccggcgc acgatcttgc ctgaccgcgt cttgggcagg ctggcgcgga tctcgatgtc
     3001 ggccggggtg gcgatgccgc ccaggtcctc gcggacgtgg tccttgaggc tggcgatgag
     3061 gcccgggccc gtggagaccc cggccttcac caccacgaag gccttgatgc tctcgccctt
     3121 gatgggatcg ggaatgccca ccacggcgct ctcggccacc gccggatggc ggatgagcga
     3181 gccctccaca tcggcggtgc cgatgcggtg ccccgccacg ttgagcacgt cgtcggcccg
     3241 gcccagcacg gcgatgtagc cgtcggcatc cttcaccgcg acgtcgcccg cgctgtagca
     3301 gccggggatg tccttccagt agtcctcgta ccgcttgggg tcgttccata cggtgcgcag
     3361 catgtagggc agcgggaact tgatgaccag caggccgccc tggccgtccg gcaccgggct
     3421 tccgtcgcgg ttcaccacgg ccatctgcgc gcctggcatg ggcttgccag ccttccccgg
     3481 ccgggcctcg aaggtgggca gggtgccgat gaccggcccc gcgatctccg tctgccacca
     3541 gttgtccacc accatgccgt tgccctggcc caccaggtgc tgctgggccc agcggtgcgc
     3601 ctccgggttc aggggttctc ccgcgcaggc catgagacgc agcttgctga ggtcgaactt
     3661 cccgggcgcc tcggcgccgt ggctcatcca catgcgcacg gccgtggggg ccgtgaacat
     3721 cacgttcacg ccgaagcgct cgcagatctc ccaggtcact tcggggctcg ggtagtccgg
     3781 ggcgccttcg cggcagagca ccgtcgcgcc gatgctgagc gggccgtaga cgatgaagct
     3841 gtggcccacc acccagccga tgtcggaggt gctccagtag atgtcgcgct cctggatctg
     3901 gtagaaggcc ttgctcaggt agttcacccc caccaggtag ccgccggtgg cgtgcaccac
     3961 gcccttgggc ttcccggtgg tgccgctggt gtagaggatg aagagcgggt gctcggcgtc
     4021 caccatctcc ggctcgcagt ggatctcgcg gccttgctgg atgtcgtaga aatccttctc
     4081 gcgctcgctg gcgaacgtca cgggctcgtc gccgggacgc gagccgcggc ggtggac
//
LOCUS       DATGWW010000560         2037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_42918, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000560 DATGWW010000000
VERSION     DATGWW010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42918"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..314)
                     /locus_tag="VK150_08140"
     CDS             complement(<1..314)
                     /locus_tag="VK150_08140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31317.1"
                     /translation="MKSRTLLFSLVGACALPLSLSAQASDVQIYGTFLPFLDHVKTSG
                     ATAPGLSPANGGATQVAASAYTGDLGNLPGRNRMTSGTSNLGFRGSFKVNDDLKIIWQ
                     IE"
     gene            complement(490..1332)
                     /locus_tag="VK150_08145"
     CDS             complement(490..1332)
                     /locus_tag="VK150_08145"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HLP31318.1"
                     /translation="METVFTVWPLNERSNLNWRLGEPAPHCHPFHQVFFITEGTGTHW
                     VDGVETRIHGPWVMLVAKGKTHLYLPDVDDGGWMFDFGEDFLDPDASWVFSDFLATSN
                     LPLPKDDLFQQASVLARLMWDVGKLRADESRPVLRHLLSAFLHLLQSRIREQAQHKQA
                     HRSSDFKLFQAFLRQLDDSFTREKEVDFYARQLRCTARRLGAVCKLVLGKTPQVIIQE
                     RCMLEAKRLLLHTDQSIQQIAASLGCEDQSNFTKAFRKATGETPTRFRKSRDLVQPGS
                     AEAM"
     gene            1476..>2037
                     /locus_tag="VK150_08150"
     CDS             1476..>2037
                     /locus_tag="VK150_08150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31319.1"
                     /translation="MRTLPLLSSALVAAAATVASAQVDARLMRYPDVSATQIAFTYAN
                     DLWVVPKAGGVAQRLSIPKGEESFARFSPDGKELAFSANYDGNLDVYVLPVSGGIPTR
                     VTHHPGNDRMVDWTPDGKSLLFASGMESGKDRFSKLFRAPKGGGLPEALPLPYAEFGA
                     LSPDGKVLAYQPVSTDFRTWKRYRGGM"
BASE COUNT          344 a          686 c          645 g          362 t
ORIGIN      
        1 ctctcgatct gccagatgat cttcagatcg tcgttgacct tgaagctgcc ccggaacccc
       61 aggttcgagg tgcccgacgt catgcggttc cgcccgggca ggttgcccag gtcgccggtg
      121 taggccgagg ccgccacctg cgtggcgccg ccgttcgccg gggagaggcc cggggccgtg
      181 gcgccgctgg tcttcacgtg gtcgaggaag ggcaggaagg tgccgtagat ctgcacgtca
      241 ctcgcctggg ccgacaggct cagcggcagc gcgcacgctc cgacaaggga gaaaagaagg
      301 gttctggatt tcacgacaga cctccgtcac gttgcttagt cgcaacattt caatgattga
      361 tttaatgatg acccatgggt tttcaattgc ccatggcatg gccagagctt agacccgaac
      421 agcccctttc ctctcggtac ccgagcgccc atttctggta aatctcggtc cggagttccg
      481 gcctgtgacc tacatcgcct cggcggagcc cggctggacg aggtcccgcg acttccggaa
      541 acgggtgggc gtctccccgg tggccttccg gaacgccttc gtgaagttgg actggtcttc
      601 gcaccccagg ctcgcggcga tctgctggat gctctggtcg gtgtggagca gcaaccgttt
      661 ggcttccagc atgcagcgct cctggatgat cacctggggc gtcttcccga gaaccagctt
      721 gcacaccgcg cccaggcgcc gggccgtgca gcgcagctgg cgcgcgtaga agtccacttc
      781 tttctcacgg gtgaagctgt cgtccagctg gcgcaggaag gcctggaaga gcttgaagtc
      841 ggagctgcgg tgtgcctgct tgtgctgcgc ctgctcgcga atcctcgact ggagcaggtg
      901 caggaaggcg gacagcaggt ggcgcaggac cggccgcgac tcatcggccc tgagcttgcc
      961 gacgtcccac atgagccgcg ccaggaccga ggcctgctgg aacagatcat ccttgggcag
     1021 cggcaggttc gacgtggcca ggaaatccga gaacacccac gacgcgtccg gatcgaggaa
     1081 gtcctctccg aaatcgaaca tccatccgcc gtcgtccaca tccggcaggt agaggtgagt
     1141 cttgcccttg gccaccagca tcacccaggg cccgtggatg cgggtctcca cgccgtccac
     1201 ccagtgggtg cccgttcctt ccgtgatgaa gaagacctgg tggaagggat ggcagtgggg
     1261 ggcgggctcg cccaggcgcc agttcaggtt gctgcgctcg ttgaggggcc agaccgtgaa
     1321 aaccgtttcc atgagaaagc atccctggcg acccgccagg gccgggccac atttttgatc
     1381 gaaaggttgt ttaacacaag cagtccgttc ccactcaacg gaccggccac tccccccgta
     1441 tgctgcctgg accctcacga gccctggagc agcctatgcg cactcttcca ctcctttcct
     1501 ccgccctggt cgcggcggcc gcgacggtcg cctcggcgca ggtggacgcg cgcctcatgc
     1561 gctatcccga cgtttcggcc acccagatcg cgttcaccta cgcgaacgac ctctgggtcg
     1621 tgcccaaggc cggaggcgtg gcccagcggc tctccatccc gaagggagag gaatccttcg
     1681 cccgcttctc gccggacggc aaggagctgg ctttcagcgc gaactacgac ggcaacctcg
     1741 atgtgtacgt gctccccgtg agcggcggca tccccacccg cgtgacccac caccccggca
     1801 acgaccgcat ggtcgactgg acgccggacg gcaagtcgct gctcttcgcc tcgggcatgg
     1861 aatcggggaa ggatcgcttc agcaaactct tcagggctcc caagggcggc ggcctgcccg
     1921 aggccctgcc cctgccctac gccgaattcg gcgccctgtc gccggacggc aaggtgctcg
     1981 cctaccagcc cgtcagcacc gacttccgca cctggaagcg gtaccgcggc ggcatgg
//
LOCUS       DATGWW010000561         1659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_452103, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000561 DATGWW010000000
VERSION     DATGWW010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_452103"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            955..>1659
                     /locus_tag="VK150_08155"
     CDS             955..>1659
                     /locus_tag="VK150_08155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31320.1"
                     /translation="MWQNMRKAPHGYGFGSTLSDAGGPILRVWWGGSHELPHVVASGE
                     KAPAVADLLRSEWPGHRVSRVDVCEDYAEPGSYDRLQELALSVARDTGVKVGTAGDHL
                     LTKEGRTLYLGAPTSHTRLRLYDKAAELRGQFHAQPDKLADIPAELARFEVQVRPQTP
                     QAKAAAATADPVSLMGSAAWMRRLMLLVAGLELEPFHAGKVWRQADDDRAYAALLAQY
                     GGLLQRICTDLGSWDCV"
BASE COUNT          250 a          516 c          614 g          279 t
ORIGIN      
        1 gcaggcttgg agctggagcc attccacgcc ggcaaggtgt ggcgccaagc ggacgatgac
       61 agggcgtatg cggccctcct ggcgcagtac ggggggctct tgcagcggat ctgcaccgac
      121 ctgggctcat gggactgcgt aggccgtcag atcggccacg atctggctgc acgctccaac
      181 aactccgcca ggggcagacg ctaggccgcg cccgcctccg gagcggggcg agcttgcgag
      241 gccacgggcc ggagggaagc ggccggtgta gggcacccgt cggggggctg ggggcgtgcc
      301 cccagtgagg cccggaaggg ccgtagctag tcacgctgcg actagggtgg ggcctcccca
      361 cgtgcgcggc gcctcgcggc gctaggcggg cggattcgtg ccttccaaag cccactagcg
      421 ttatgccgca ccttgcgcta gagtgcagca cctcaccatg aagtgcagca catgcccgcc
      481 aagaacccac gactgtccgt tgtgctctct ccttcgcttg ccgcgacgct tgctgcgctc
      541 tcggaagcga cgggggaaag tgcttcgtcc cttgtgcggt cgatcctcga gcagtcgcaa
      601 cctgccttgg ctcgcatgct tcagctcgta gtggctgcaa agacggcgaa gggccagatt
      661 ggcgagggcg tctcggagtc gctccggaag gtggttgatg agttgcagga cgcgatggca
      721 gtcgcggatt cccgcctgga ccgggtttcg acggatctgg ttggccaggc cgaaacggtg
      781 tccgggaggc ggcggcgggc ggtttcaacc cccggtcctg taacacgggg gtcaggttcc
      841 ccccggaagg ctcggaaggg ggtttgaatg gctcgctttg actggtatca ggccacggtc
      901 ccggcgccag ttggggacgt cctggcagcc cttcctgggc tgtcggatgg gtcggtgtgg
      961 cagaacatgc ggaaagcgcc gcacggctac gggttcgggt ctacgctgag cgatgccggc
     1021 gggccgattc tgcgggtgtg gtggggcggc tcccacgaat tgccgcatgt cgtcgcttcc
     1081 ggcgaaaagg cccctgcggt tgccgatctg ctcagatccg agtggcccgg ccaccgggtc
     1141 agccgcgtgg acgtctgcga ggactacgcg gagcccgggt cctatgacag gttgcaggag
     1201 ctggctttgt cggtggcccg agatacgggg gtcaaggttg gcacggccgg cgatcacctg
     1261 ctgacgaagg aggggcgcac gctgtacctt ggcgccccca cctcgcacac taggctcagg
     1321 ctctacgaca aggcggccga gctgcgcggg cagttccacg cacagccgga caagctggcc
     1381 gacatcccgg cagagcttgc ccgcttcgag gttcaggtgc gcccgcagac cccgcaggcg
     1441 aaggcggcgg ccgcgactgc ggacccggtg tccctcatgg gttcggcggc ctggatgcgg
     1501 cggctcatgc tgctggttgc aggcttggag ctggagccat tccacgccgg caaggtgtgg
     1561 cgccaagcgg acgatgacag ggcgtatgcg gccctcctgg cgcagtacgg ggggctcttg
     1621 cagcggatct gcaccgacct gggctcatgg gactgcgta
//
LOCUS       DATGWW010000562         2676 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_42999, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000562 DATGWW010000000
VERSION     DATGWW010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2676
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42999"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..871
                     /locus_tag="VK150_08160"
     CDS             <1..871
                     /locus_tag="VK150_08160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31321.1"
                     /translation="MRKGPVIGLALLLAALAVAGFLLYREGLVPVPLADGRSAFVPGN
                     PEYGEGEAQVQALMPASPGLEAFLAHQSDLALIEPAPDGGWAGVLAAGLQASRHGRRW
                     RVQIGPGWRMQDGALLDAAKAGAALASEVTRLGGEIRPVDAMTLDLRFKARPAGFPDR
                     LAQWRVPGTGPFRREGHTLTRHEGFIPGRAGFARLEVVTDAALLESRAWAEGLAAGRW
                     AWAVFPGHIAPEDMAKVRLAPYDELRMKDGSVWFLSRRMRRLRPTADDWTRTRLFGAW
                     RGAMDLPYDPLGM"
     gene            complement(881..1756)
                     /locus_tag="VK150_08165"
     CDS             complement(881..1756)
                     /locus_tag="VK150_08165"
                     /inference="COORDINATES: protein motif:HMM:NF015699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1732 domain-containing protein"
                     /protein_id="HLP31322.1"
                     /translation="MKSMTAFAEIVRPLAAGQLRLTLRSVNSKSLDLSLRLPPALFPL
                     EAGLRAQVREAAQRGKLDLAVEVQDEPSLEPHLNRALLRAVAKGWQEDAEWLNLPPLT
                     AEAFFRLPGAFQSPASDLGERLEAPVREALDALLEVWNEGRSREADRLRPFFEDGVAR
                     LKALKDRLQAEATLQAAELPALYRQRIEQLLDDARLAGQLPAERLLAEAGVLAERQDV
                     REELIRLSAHLDDFAERLAKGRLEGKAVDVWCQEVLRELNTTGSKCKRLDMTRAVMEA
                     KGVLDQIREQSANLE"
     gene            1989..>2676
                     /locus_tag="VK150_08170"
     CDS             1989..>2676
                     /locus_tag="VK150_08170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31323.1"
                     /translation="MAESFFSTASNPTLQGWQAPGSLDFQAAFLRAGGWALPRTDAFP
                     DAAQLRARLQELKASMREGAKIGLDLRGLRDSADHVMAAAREAGVAFLLHTAELPPSL
                     AMLRHANMPRLVAVQNPEEAAQAKAGGASALLARACDVASLRRFGLPVMAVADTEAEA
                     RQAMADGAIGLQPRTPGLLDASPLAAFRTRLMAGLDSMAQAFVRRGACTLPRLKIRNL
                     DLAYPIQQGGM"
BASE COUNT          347 a          970 c          957 g          402 t
ORIGIN      
        1 catgcgcaag ggacctgtca tcggtttggc cctgctgctc gcggccctcg ccgtggcggg
       61 cttcctgctc taccgcgagg gcctggtccc ggtgccgctc gccgatggcc gatcggcctt
      121 tgtgcccggg aaccccgagt acggcgaggg cgaggcccag gtgcaggccc tgatgcccgc
      181 gagcccgggg ctcgaggcct tcctggccca ccagtcggac ctcgcgctga tcgagccggc
      241 gcctgacggc ggctgggccg gggtgctggc cgccggcctg caggcctccc gccacggccg
      301 tcgctggcgc gtgcagatcg ggcccggctg gcggatgcag gacggcgcgc ttctggacgc
      361 cgcgaaggcc ggcgcggcgc tcgccagcga ggtgacccgc ctgggcggcg agatccgtcc
      421 cgtggacgcc atgaccctgg acctgcggtt caaagcgcgg cccgcaggct tccccgaccg
      481 cctggcccag tggcgcgtcc cgggcaccgg gcccttccgg cgggagggcc acaccctgac
      541 ccggcatgag ggattcatac cgggccgcgc cggcttcgcc cggctggagg tcgtcaccga
      601 tgccgccctg ttggaaagtc gcgcctgggc cgagggcctc gctgcgggcc gctgggcctg
      661 ggcggtgttc ccgggccaca ttgcgcccga ggacatggcg aaagtgcggc tcgcccccta
      721 cgacgagctg cgcatgaagg acggcagcgt gtggttcctc tcccggcgca tgcgtcggtt
      781 gcggcccacc gcggacgact ggactcgcac ccgcctcttc ggcgcgtggc gcggcgccat
      841 ggatctgccg tacgatccgc tcgggatgtg aacccggagg ctattccagg ttggcggact
      901 gctcgcggat ctgatccaga acgcccttgg cctccatgac ggcccgggtc atgtccaggc
      961 gcttgcactt gctgccggtg gtgttgagct cccggaggac ctcctggcac cacacgtcca
     1021 cggccttgcc ctcgaggcgg cccttggcca gccgctcggc gaagtcatcc aggtgggccg
     1081 agaggcggat gagctcctcc cggacatcct ggcgctccgc cagcaccccg gcctcggcga
     1141 gcaggcgttc ggcgggcagc tggccggcga gacgcgcgtc atcgagcagc tgctcgatgc
     1201 gctggcgata gagggcgggc agctcggcgg cctggagcgt cgcctccgcc tggagacggt
     1261 ccttcaaggc cttcagccgc gcgaccccgt cctcgaagaa ggggcggagg cggtcggcct
     1321 cgcggctccg gccttcgttc cacacttcga gcagggcgtc gagcgcctcc cgaactggag
     1381 cctccagccg ctcgccgagg tccgatgccg gtgactggaa ggcgccgggc agccggaaga
     1441 aggcttcggc cgtgaggggg ggaaggttca gccactcggc gtcctcctgc cagcccttgg
     1501 ccacggcgcg gagcagggcg cggttcaggt gcggttccag ggagggttcg tcctgcacct
     1561 ccaccgcgag gtcgagcttg ccgcgttggg ccgcttcgcg cacctgggcg cgcaggccgg
     1621 cctccagggg gaagagcgcc ggcggcaggc gcaggctgag gtcgagggac ttcgaattga
     1681 cgctccgcag ggtgagccgg agctggcccg ccgcgagggg gcggacgatc tctgcgaagg
     1741 cggtcatgga tttcatcggc gtcatcccgg gagtcgagat ccaggttatc ccaggctccc
     1801 ggtcgctccg gcgcccagga ccctgccaag gtcgtgaagg gttggcgggt tttgcatttt
     1861 aaaatcaatt aaaacaataa ttaaaaacgt ttcctgactc cgggtcgaat ccttgaaccc
     1921 ggtcacagga cacaggcccc agaatggggg ggcggcggaa tcctttccgg cgccccccgg
     1981 aggcccggat ggccgagtcc ttcttttcca ccgcgtccaa ccccaccctg caggggtggc
     2041 aggccccggg ctcgctggat ttccaggccg ccttcctgag ggccggaggc tgggcgctgc
     2101 cccgcaccga cgcctttccg gacgcggccc agctccgggc gcggctgcag gaactcaagg
     2161 cctccatgcg ggagggcgcc aagatcgggc tggacctgcg gggcctgcgg gacagcgccg
     2221 accacgtgat ggccgccgcc cgggaggccg gcgtggcctt cctgctgcac acggctgaac
     2281 tgccgccctc cctcgccatg ctccggcacg ccaacatgcc ccgcctggtg gcggtgcaga
     2341 atcccgagga ggccgcccag gccaaggccg gcggcgcctc cgcgctgctc gcgcgggcct
     2401 gtgatgtggc gtccctccgg cgcttcggcc tgcccgtcat ggccgtggcc gacacggaag
     2461 ccgaggcgcg ccaggccatg gccgacggtg ccattggcct ccagccccgc acgccgggcc
     2521 tgctggacgc ctccccgctg gccgccttcc gcacccgcct catggccggc ctggattcca
     2581 tggcccaggc cttcgtccgc cgcggggcct gcacgctgcc ccgcctcaag atccgcaacc
     2641 tcgacctggc ctatcccatt cagcagggcg gcatgg
//
LOCUS       DATGWW010000563         1886 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_43327, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000563 DATGWW010000000
VERSION     DATGWW010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43327"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..387
                     /locus_tag="VK150_08175"
     CDS             <1..387
                     /locus_tag="VK150_08175"
                     /inference="COORDINATES: protein motif:HMM:NF013155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31324.1"
                     /translation="AAGLRLAAHAGENGPGANVREAVLEGGVSRIVHGLRADMATFEL
                     LAERGIPVDICPSSNRALAADVAPHPLPRMLAAGVRCALGTDDPGVIPCDLGTEQEAA
                     RAMGLSPGDLALLRRHGAEDAWCLLP"
     gene            599..675
                     /locus_tag="VK150_08180"
     tRNA            599..675
                     /locus_tag="VK150_08180"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:633..635,aa:Arg,seq:tcg)
     gene            700..784
                     /locus_tag="VK150_08185"
     tRNA            700..784
                     /locus_tag="VK150_08185"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:734..736,aa:Leu,seq:tag)
     gene            920..>1886
                     /gene="tig"
                     /locus_tag="VK150_08190"
     CDS             920..>1886
                     /gene="tig"
                     /locus_tag="VK150_08190"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HLP31325.1"
                     /translation="MSATLHHQSPTRKAVEVTVPAAEVSAAFNEVVAKIAPKVRIPGF
                     RPGKAPRPVLMQKYAREIQSDVAQQLVEKHFWRAAQEAGALPISHPSLEKLDLKEGAD
                     AVFRAQFDVAPEVALPDYKALTLTKRKRAIDAATIDEHVEGLRQRATKLLPVDDGAVA
                     TGLVVTCDIRVKPQGLKAQEYKDQVLEIDATRPFDGELVGLKADEKKSFTLTHPADDS
                     NRVLAGKSLSYDVLVKDIRRKEVPALGDEFAKDMGAFENLEALKAAVKKDLEEASERD
                     GLARLQATLLDTLLDAAPFEVPRSMVILQLDDYCQEFAQHVARQGM"
BASE COUNT          328 a          689 c          599 g          270 t
ORIGIN      
        1 gccgcgggcc tgcgcctcgc cgcccatgcc ggcgagaacg gccccggcgc caacgtgcgg
       61 gaggcggtgc tggagggtgg cgtctcccgc atcgtccatg gccttcgcgc ggacatggcc
      121 accttcgagc tgcttgcgga gcggggcatc cccgtcgaca tctgccccag ctccaaccgg
      181 gccctcgctg ctgacgtcgc cccccatccc ctgccccgca tgctggccgc cggcgtccgc
      241 tgcgccttgg gcaccgatga tcccggcgtc atcccctgcg acctgggcac ggagcaggaa
      301 gcggcccgag ccatgggcct ctcgcccggg gacctggccc tcctccggcg gcatggggcc
      361 gaagatgcct ggtgcctgct gccctgaccc acccatggct cgaagcgccc ggccgatcca
      421 ggtagacatc gatgccctcc tcgccggcac cgcgcgagac gcgcggaagg gcacaccagc
      481 ggacgcgtcc cacgacccaa gcacgactgg atggcgcctt tggcgtcggc ggcgccatcc
      541 agcccaaccc agggctcgaa gcgcccggcc gatccaggta gactagtgga ttcggtgcgc
      601 gcccatagct cagctggata gagcatcagg cttcgaacct gagggtcggg cgttcgagtc
      661 gctctgggcg caccaccgga acattgacaa ttcggctttg cgagcgtggc ggaactggta
      721 gacgcactgg atttaggttc cagcggttca caccatgtcg gttcgagtcc gaccgttcgc
      781 accatttcgc aggattgcga gataggacgg aatggacgcg aagcggccat ggccgcccga
      841 agggcgaggg cacaggaggt gcccgagtca ccagaaaagc cggatcatcc acagccatta
      901 cacgattcat ggagcatcca tgtccgccac cctccaccac cagtccccca cccgcaaggc
      961 tgtcgaagtg acggtccccg ccgccgaggt gagcgccgcc ttcaacgagg tcgtggccaa
     1021 gatcgctccg aaggtccgca tccccggctt ccgccccggc aaggcccccc ggcctgtgct
     1081 gatgcagaag tacgcccggg agatccagtc cgatgtcgcc cagcagctcg tggagaagca
     1141 cttctggagg gccgcccagg aagcgggcgc cctgcccatc tcgcatcctt cgctcgagaa
     1201 gctggatctc aaggagggcg ccgatgccgt cttccgcgcc cagttcgacg tggcccccga
     1261 agtggccctg cctgactaca aggcgctgac cctcaccaag cggaagcggg ccatcgacgc
     1321 ggccaccatc gacgagcacg tcgagggcct gcgccagcgc gccaccaagc tcctccccgt
     1381 ggacgacggc gccgtggcca cgggcctcgt ggtcacctgc gacatccgtg tgaagcccca
     1441 gggcctcaag gcccaggaat acaaggacca ggtgctggag atcgacgcca cccgtccctt
     1501 cgacggggaa ctcgtgggcc tcaaggcgga cgagaagaag agcttcaccc tcacccaccc
     1561 cgcggatgat tcgaaccgcg tgctcgccgg caagtcgctc tcctacgacg tgctggtcaa
     1621 agacatccgc cgcaaggaag tgccggcgct gggcgacgaa ttcgccaagg acatgggcgc
     1681 cttcgagaac ctcgaagccc tcaaggccgc cgtgaagaag gacctggagg aggcttccga
     1741 gcgcgatggc ctggcccgcc tgcaggccac cctgctcgac accctcctgg acgccgcgcc
     1801 cttcgaggtg ccccgctcca tggtcatcct gcagctcgac gactactgcc aggagttcgc
     1861 gcagcacgtg gcccgccagg gcatgg
//
LOCUS       DATGWW010000564         1645 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_90498, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000564 DATGWW010000000
VERSION     DATGWW010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90498"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..972
                     /locus_tag="VK150_08195"
     CDS             <1..972
                     /locus_tag="VK150_08195"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HLP31326.1"
                     /translation="VGGSAWDYANPMDRETALRLYEAMLLTRLTEERLVKLFRQGKTL
                     GSVYRSLGQEATACATAMALGPEDVIAPLIRNLGSMMVRGVTPEEIFLQYLGRATSPS
                     GGREHNNHFGSVARGIIAPTSMLGALIPVMAGVALSFRQKGERRVAMTWIGDGGSSTG
                     AFYEGLNFAVVQKLPLIVVGESNGFAFSTPPDRQMAGRMSMRSQGAFTLTVDGNDGAA
                     VFEAAAQGRQRCLEGKGPVFIVCETFRMKGHAEHDDQRYVDPALLDQWAAKDPLPRLE
                     AWMAQRGWTVQAGLAARLEAHLEAAAESALAAPWPDPATLTTGVVSL"
     gene            1046..>1645
                     /locus_tag="VK150_08200"
     CDS             1046..>1645
                     /locus_tag="VK150_08200"
                     /inference="COORDINATES: protein motif:HMM:NF024140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCP four helix bundle domain-containing protein"
                     /protein_id="HLP31327.1"
                     /translation="MDNLKLRGKFNLLLALQTAALLLVAVVGWLSVNELQSGQREVSS
                     QLAKTATLSRVLNGMNVFRTVHVSMIGGAADPAYIAMRQGVMKKYGEALEKDLTAAKA
                     LAWSREEQVILDEAIQAFRQYDQGFPVLLAQAQADRSPQAISRLMEGNVEIMRTARDR
                     VLKLQKAAEAAAETLIVDDLRHSSAAKAWIAGVGLVSIVI"
BASE COUNT          277 a          570 c          546 g          252 t
ORIGIN      
        1 gtcggagggt cagcatggga ctatgctaac ccgatggacc gcgagaccgc cctccgcctc
       61 tacgaggcca tgctgctcac ccgcctcacc gaggagcggc tggtgaagct cttccgccag
      121 ggcaagaccc tcggcagcgt ctaccgaagc ctcggccagg aagccacggc ctgcgccaca
      181 gccatggccc tcggcccgga ggatgtcatc gcgcccctga tccgcaacct gggctccatg
      241 atggtccgag gcgtcacgcc ggaggagatc ttcctgcagt acctcggccg ggccaccagc
      301 cccagcggag gacgggagca caacaaccat ttcggcagcg tggcgcgtgg catcatcgcg
      361 ccgacctcca tgctcggagc ccttatcccg gtcatggcgg gcgtggccct ctccttccgg
      421 cagaagggcg agcgccgggt ggccatgacc tggatcggcg acggaggcag ttccacgggc
      481 gcgttctatg aagggctcaa cttcgcggtg gtccagaagc tgcccctcat cgtggtgggg
      541 gaatccaacg gtttcgcctt ctccacgccg ccggaccggc agatggccgg ccgcatgtcg
      601 atgcggtccc agggggcctt caccctcacc gtggacggca acgacggggc cgccgtgttc
      661 gaggccgcag cccaaggccg acagcgctgc ctggagggca aggggccggt gttcatcgtc
      721 tgcgagacct tccgcatgaa gggccacgcc gagcacgatg accagcgcta tgtcgacccg
      781 gcgctgctcg accagtgggc cgccaaggat cccctgcccc ggctggaagc ctggatggcc
      841 cagcggggct ggacagtgca ggctggcctg gccgcacgcc tggaggctca cctcgaggcg
      901 gcggcggaat ccgccctcgc cgccccatgg cctgatcccg ccaccctcac cacgggcgtg
      961 gtgtcgcttt gacccgggat taatccgacc cacccgtccc ccgataagag ggcattcggg
     1021 gtggatcatg agcttgggaa aaagattgga taacctgaaa ctgcgcggga agttcaacct
     1081 gctgctggcc ctccagacag ccgccctctt gctggtggcg gtggtcggct ggctctcggt
     1141 gaacgaactc cagtcggggc agcgggaggt gagttcccaa ctcgcgaaga ctgcgacgct
     1201 gtccagagtg ctgaacggca tgaacgtgtt ccggactgtc cacgtcagca tgatcggcgg
     1261 ggccgccgac cctgcctaca tcgccatgcg ccagggcgtc atgaagaagt acggcgaggc
     1321 cctggagaag gacctgaccg ccgccaaggc cctggcctgg tcccgggagg agcaggtcat
     1381 ccttgacgag gccatccaag ccttccggca gtacgaccaa gggttccccg tcctgctcgc
     1441 ccaggcccag gccgaccgct cgccccaggc catctcccgc ctgatggaag gcaacgttga
     1501 gatcatgcgc acggcccggg accgggtgct gaagctccag aaggccgccg aggcggcggc
     1561 ggagaccctg atcgtcgatg acctgcggca ctcctccgcc gccaaggcct ggatcgccgg
     1621 ggtgggcctt gtctccatcg tgatc
//
LOCUS       DATGWW010000565         2290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_156986, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000565 DATGWW010000000
VERSION     DATGWW010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156986"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2104
                     /gene="lon"
                     /locus_tag="VK150_08205"
     CDS             <1..2104
                     /gene="lon"
                     /locus_tag="VK150_08205"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: protein motif:HMM:TIGR00763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HLP31328.1"
                     /translation="YLLPEPTHPAGQTLQPFHQAVEAFLGRNSDASRLLSMDQIRELS
                     LGKAIDTVAGLVPAEVKQKQEILEQLEIGPRLEALMHLLELDAARSEVDRTLDEKTRQ
                     RLDQDHKQYVLNEKMRVIQQELGKKEEKDEGTRLKDQIEAAGMSAEAKAKALEELERL
                     EAMPPQSAEATVSRTYLDWLLALPWQAMAEERLDLMEAERVLDEDHSGLDKIKARILE
                     HLAVMARLQKGPAGAAEGSDRPPLRGPILCLVGPPGVGKTSLARSIARALNRPFVRLS
                     LGGVRDEAEIRGHRRTYIGSMPGRIISLMKKAKVRNPLMLLDEIDKMASDFRGDPSSA
                     LLEVLDPEQNGSFQDHYLDVGFDLSQVLFLATANVRHQIPEPLEDRLEVLELSGYTTK
                     EKLAIAEQHLLPRALEGHGMKDMAVRFEPAALEKVVQAYTREAGVRQLEREIANILRK
                     LARHTLQPHLSDSAGEAFDPVITAERVPKLLGPEKILETRAEDTVPPGLVNGLAWTPT
                     GGDLLTIEAAVLPGKGLLKLTGKLGEVMQESANLALSYVRARAERLGLKRDFLDSVDL
                     HVHVPEGAIPKDGPSAGITLATALISVLTGIPARADMAMTGELTLRGRVLPIGGLKEK
                     LLAAHRQGRKAVLIPSENARHLEEVPAEVREQLSIHLVGHMDEVIQLALTRMPEPLMP
                     DVAAPTGQGPARENPTPQ"
BASE COUNT          392 a          841 c          747 g          310 t
ORIGIN      
        1 ttacctgctc cccgagccca cccatcccgc gggccagacg ctgcagccct tccaccaggc
       61 cgtggaggcc ttcctgggcc gcaactctga tgcgtcccgc ctgctcagca tggatcagat
      121 ccgcgagctg tccctgggca aagccatcga caccgtggcg ggccttgtgc ccgccgaggt
      181 caagcagaag caggagatcc tcgagcagct ggagatcggc ccccggctgg aggcgctcat
      241 gcacctgctg gagctggacg ccgcccgctc cgaggtggac cgcaccctcg atgagaagac
      301 ccgccagcgc ctggaccagg accacaagca gtacgtgctg aacgagaaga tgcgcgtcat
      361 ccagcaggaa ctgggcaaga aggaagagaa ggacgaaggc acccgcctga aggaccagat
      421 cgaggccgcg ggcatgagcg cggaggccaa ggccaaggcc ctggaggagc tggagcgcct
      481 cgaggccatg ccgccccaga gcgccgaggc caccgtcagc cgcacctacc tcgattggct
      541 gctggccctg ccctggcagg ccatggcgga agagcgcctc gacctcatgg aggccgagcg
      601 ggtgctggac gaggatcatt ccggcctcga caagatcaag gcccgcattc tcgagcacct
      661 ggcggtgatg gcccggctgc agaagggccc cgcgggcgcc gccgagggct cggaccggcc
      721 tcccctgcgc ggtccgatcc tgtgcctggt gggccccccc ggcgtgggca agacctcgct
      781 ggcccgcagc atcgcccggg ccctgaaccg gcccttcgtg cgcctgtccc ttggcggcgt
      841 gcgcgacgag gctgagatcc gcggccaccg ccgcacctac atcggctcca tgcccggccg
      901 catcatctcg ctgatgaaga aggcgaaggt gcgcaacccg ctcatgctgc tcgacgagat
      961 cgacaagatg gcctcggatt tccgcggcga cccgagctcg gccctgcttg aggtgctgga
     1021 tcccgagcag aacggaagtt tccaggacca ctacctggac gtgggcttcg acctcagcca
     1081 ggtgctcttc ctggccacgg ccaacgtgcg ccaccagatt cccgaacccc tcgaggaccg
     1141 cctcgaggtg ctggaactga gcggctacac caccaaggag aagctggcca tcgccgagca
     1201 gcacctgctg ccccgggccc tcgagggcca cggcatgaag gacatggccg tgcggttcga
     1261 gccggcggcg ctggaaaagg tcgtgcaggc ctacacccgt gaggcgggcg tgcgccagct
     1321 ggagcgcgag atcgccaaca tcctgcggaa gctggcccgc cacaccctgc agccccacct
     1381 ctccgattcg gcgggcgagg cctttgatcc cgtcatcacc gccgagcggg tgccgaagct
     1441 cctcgggccc gaaaagatcc tggagacccg cgccgaggac acggtccctc cgggtctggt
     1501 gaacggcctg gcctggaccc ccacgggcgg cgacctgctg accatcgagg ccgcggtgct
     1561 gccgggcaag ggcctgctca agctcacggg caagctcggc gaagtgatgc aggagagtgc
     1621 caacctcgcg ctgagctacg tccgcgctcg ggccgagcgc ctgggcctga agcgggactt
     1681 cctcgactcc gtggatctgc acgtccacgt tcccgaaggc gccattccga aagacggccc
     1741 cagcgccggc atcaccctgg ccacggccct gatctccgtg ctcacgggga tccccgccag
     1801 ggccgacatg gccatgaccg gcgagctcac cctccgcggt cgggtgctcc ccatcggcgg
     1861 cctgaaggag aagctcctgg cggcccaccg gcagggccgg aaggcggtgc tcatccccag
     1921 cgagaacgcc cggcacctcg aggaagtgcc cgctgaggtg cgcgagcagc tgagcatcca
     1981 cctcgtgggc cacatggacg aggtcatcca gctggccctc acccgcatgc ccgagcccct
     2041 gatgccagac gtggcggcac ccaccgggca gggacccgcc cgcgagaacc cgacgcctca
     2101 gtaaggcagt tccgagtctg ggccccaggc gccccccttc cgcctgctac cctgatccca
     2161 tgcgttttct gtccagccac gtcatccact tcatcgtcat gggactcggc atcgccctgg
     2221 tgctgggcct gctgcaccca accacgcggc ccgagcggac gcgcgcctcg atcctcaagc
     2281 acgcggcggg
//
LOCUS       DATGWW010000566         2953 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_269623, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000566 DATGWW010000000
VERSION     DATGWW010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2953
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269623"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..476)
                     /locus_tag="VK150_08210"
     CDS             complement(72..476)
                     /locus_tag="VK150_08210"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HLP31329.1"
                     /translation="MRLSSSRQRGFTLIELIVVMTILALLTTVGIAGYRQKVRTAKEA
                     VLKENLFQINHALEQFRADRGKYPASLGPLREFGYLRDIPYDPMTQSKDMWQTELEPP
                     DPDNPDAELGVFRVRSGSTEVGSNGLPYNEWL"
     gene            complement(619..1728)
                     /gene="hppD"
                     /locus_tag="VK150_08215"
     CDS             complement(619..1728)
                     /gene="hppD"
                     /locus_tag="VK150_08215"
                     /EC_number="1.13.11.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR01263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003868 - 4-hydroxyphenylpyruvate
                     dioxygenase activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HLP31330.1"
                     /translation="MSQPSFALTAPTSQKPASNPLGLSRIDHFQLTGSIAGLEPLYRR
                     LGFARVASGTLAWGRVVHLRQQRMDILIFEADTTHPAGRYQQAHGEGVCALNFLVDHL
                     ETAVDWARAKGARIMVEPQTHALGEGTVSFAAIQGVGDVWNFLVERKGTPTVFWPGLT
                     PDPAPALCDPGLVRVDHLTNNVGPAEMDALVDFYEQVYGFGVTREFHIRGALGTGLDS
                     KVVQSANNQVIIPINQPTDEKSQVQEYVNRHKGQGVQHIAMSTNDIFHTLRTLNEQGF
                     RFLRVPDTYYELLPGRIARSGYTVQEDLATVKELGVQIDGDGTGYLLQIFTEDQIGPL
                     FFEIIQRRGNMGFGEGNFQALYDSIELDQKKRGVL"
     gene            complement(1874..2314)
                     /locus_tag="VK150_08220"
     CDS             complement(1874..2314)
                     /locus_tag="VK150_08220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31331.1"
                     /translation="MLRYALGQLILILLVVLAIAMIGGQAATWLHPLPWALVLVLATP
                     LAALLSIHPWATLRQAVRDAGHPSAASPSGTASAGLWRRFESFIYTGALLGALMGWMV
                     TFSQLSPDLPRLGTQLAACLVPPFVGVLLGLACRVLRARIQTAS"
     gene            complement(2466..>2953)
                     /locus_tag="VK150_08225"
     CDS             complement(2466..>2953)
                     /locus_tag="VK150_08225"
                     /inference="COORDINATES: protein motif:HMM:NF023413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31332.1"
                     /translation="ENDVLLAEASKATIIGFHTKAEKKTEELAREEGVDLRFHDIIYK
                     VTEEIEQAMVGMLDATEKETIHGQAEIRQLFKIGRTVIAGSFVTEGKVQKSFKVRVKR
                     GEAVLFEGGLKNLKRFKEDVTEVKNGLDCGISLDGFDDLKEGDILEFFSKEKVIATSL
                     S"
BASE COUNT          471 a          888 c         1075 g          519 t
ORIGIN      
        1 tggtcgaggc ggtgcagggt ggaggggctc atggcaggcc ggcaggttgg gggcggaagg
       61 ggcgggggcc cctagagcca ctcgttgtaa gggaggccgt tcgaacccac ctcggtggag
      121 ccgctgcgca cgcggaacac ccccagttcg gcatccgggt tgtcggggtc ggggggttcc
      181 agctccgtct gccacatgtc cttcgactgg gtcatggggt cgtaggggat gtcgcggagg
      241 tacccgaact cccgcagggg ccccaggctc gcggggtact tgccccggtc ggcccggaac
      301 tgctccaggg cgtggttgat ctggaacagg ttctccttga gcacggcctc cttggccgtc
      361 ctcaccttct ggcgatagcc cgcgatgccc accgtggtca gcagggccag gatggtcatg
      421 accacgatca gctcgatgag cgtgaagccg cgctggcggg aggaggagag gcgcatggaa
      481 tcaccttacc gcaagggatg cggggccgcc gcccccaggt tccgggctgg catgctgagc
      541 gtgacctccg gagcgccgct gtttctgggg gagcctgcgg cgccgggacc cggcgaggcg
      601 cgaatgaggt aagggaggct acaggacgcc gcgctttttc tgatccagtt cgatggagtc
      661 gtagagcgcc tggaaattgc cctcgccaaa gcccatgttc ccccggcgct ggatgatctc
      721 gaaaaacagc ggcccgatct ggtcctccgt gaagatctgg agcaggtagc cggtgccgtc
      781 gccgtcgatc tggacgccca gctccttcac ggtggcgagg tcctcctgca cggtgtaccc
      841 gctgcgggcg atgcggccgg gcagcagctc gtagtaggtg tcgggcaccc gcaggaaccg
      901 gaagccctgc tcgttcaggg ttctcagggt gtggaagatg tcgttggtgg acatggcgat
      961 gtgctggacg ccctgcccct tgtgccggtt cacgtactcc tgcacctgac tcttctcgtc
     1021 ggtgggctgg ttgatcggga tgatcacctg gttgttggcg ctctgcacca ccttggaatc
     1081 caggcccgtg cccagcgcgc cgcggatgtg gaactcgcga gtgactccga agccatagac
     1141 ctgctcgtag aagtccacga gggcgtccat ctcggcgggc ccgacgttgt tggtgaggtg
     1201 gtccacgcgc accaggccgg ggtcgcagag ggcgggggcg ggatccgggg tgagtccggg
     1261 ccaaaatact gtcggggtgc ccttgcgttc cacgaggaag ttccagacgt cgcccacacc
     1321 ctggatggcc gcgaagctca ccgtgccctc ccccagggcg tgggtctggg gttcgaccat
     1381 gatgcgggcg cccttggccc gggcccagtc cacggccgtc tccaggtggt cgaccaggaa
     1441 attcagggcg cagacgccct cgccgtgcgc ctgctggtag cggcccgctg ggtgggtggt
     1501 gtcggcttcg aagatgagga tgtccatgcg ctgctggcgc aggtggacga cccggcccca
     1561 ggcgagggtg ccgctggcga cgcgggcgaa gccgagcctg cggtagagcg gttccaggcc
     1621 tgcgatggaa ccagtcagct ggaagtggtc gatgcggctg aggcccagcg ggttgctggc
     1681 gggtttctgg ctggtgggcg cggtgagggc gaagctgggc tggctcatgg gcggtcctgg
     1741 gatgggtcgg ttccagtctg cggaacttcg gccgtgacct ggatcacaca gtgatggtta
     1801 ctttaatgta atcaatattt gaacaccatt gagtcaataa tggaacgcaa tggtcgaagc
     1861 ccgtgccctc gggtcaggag gcggtttgga tcctggcccg gagcacgcgg caggcgaggc
     1921 ccagcagtac cccgacgaag ggcggcacca ggcacgccgc cagctgggtg ccgagcctgg
     1981 ggaggtcagg ggacaactgg gagaaggtga ccatccagcc catgagggcc ccgaggaggg
     2041 cgccggtgta gatgaaggac tcgaagcggc gccacaaccc ggcagaggcg gtgcccgaag
     2101 gggaggcggc cgaggggtgg cccgcgtcgc ggaccgcctg gcgcagggtc gcccacggat
     2161 ggatggacag gagggccgcc aggggcgtgg ccaggaccag gaccagggcc cagggcaggg
     2221 gatggagcca ggtggcggcc tgcccgccga tcatggcgat ggcgaggacc accaacagga
     2281 tgaggattag ttgacccagg gcgtaccgca gcatgaacac ctcccgactc cgccccttcg
     2341 ggtggggagg agccactcat gagcttcatg gccgcgggaa tcagatcacc cgcccctcgc
     2401 cagacgcctc gccacgaaca caaggggccc gcagtgcggg ccccttgctg catgcggtgc
     2461 gcgggtcagc tcagcgaggt ggcgatcacc ttctccttgc tgaagaactc gaggatgtcg
     2521 ccttccttca ggtcgtcgaa gccatccagg gagatgccgc aatcgaggcc gttcttcacc
     2581 tcggtcacgt cctccttgaa gcgcttgagg ttcttgaggc cgccttcgaa gaggaccgcc
     2641 tcgccgcgct tcacgcggac cttgaaggac ttctggacct tgccttcggt gacgaaggag
     2701 ccggcgatga ccgtgcggcc gatcttgaag agctgacgga tctcggcctg gccgtggatc
     2761 gtctccttct cggtggcgtc gagcatgccg accatggcct gttcgatctc ttccgtgacc
     2821 ttgtaaatga tgtcgtggaa gcgcaggtcc acaccctctt cgcgggcgag ttcctcggtc
     2881 ttcttttcgg ccttggtgtg gaagccgatg atggtggcct tggaggcctc ggcgagcagc
     2941 acgtcgttct cgg
//
LOCUS       DATGWW010000567         2894 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_384982, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000567 DATGWW010000000
VERSION     DATGWW010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2894
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384982"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..1197
                     /locus_tag="VK150_08230"
     CDS             142..1197
                     /locus_tag="VK150_08230"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: protein motif:HMM:TIGR02089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009027 - tartrate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0046395 - carboxylic acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tartrate dehydrogenase"
                     /protein_id="HLP31333.1"
                     /translation="MRDIRIAVIPGDGIGKEVVPEGIRVLEAAAAKHGLRFHWDTFPW
                     SCEYFLEHGRMMPEDGLDQIRHHDAIFLGAVGFPGVPDHVSLWGLLIPIRRGFKQYAN
                     IRPVKLMPGVPCPLAGRQVGDIDFIVVRENNEGEYSSIGGRLYEGTDQEMAVQQSVFT
                     RQGVDRILKVAFDIAQSRPRKHLTSATKSNGIAITMPYWDERVKAMSAAYPGVKVDQF
                     HVDILTAHFVRNPHWFDVVVGSNLFGDILSDLGPACTGTIAIAPSANLNPERAFPSMF
                     EPVHGSAPDIYGKGIANPIGQIWAGAMMLDHLGCPEAGASVMAAIETVLASGLRTPDM
                     GGTASTTDMGKAIADAV"
     gene            complement(1199..1705)
                     /locus_tag="VK150_08235"
     CDS             complement(1199..1705)
                     /locus_tag="VK150_08235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31334.1"
                     /translation="MALLLISRGAPPPLEIVIPLFLLMFFGTSQLTFRLLGIRALYQA
                     FPADRSDPIEQNLGWIQIEFGAWRGHTPMSVKAGRRCLHLKQPFPFQPMVWLGPASIP
                     WEQVRLIEAIGDDRWAFWKAAVFELGPENRRIRLRGRAARTLQALLEARQGRAQAPPV
                     PVSAIRPR"
     gene            complement(1705..2496)
                     /gene="mazG"
                     /locus_tag="VK150_08240"
     CDS             complement(1705..2496)
                     /gene="mazG"
                     /locus_tag="VK150_08240"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF007113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HLP31335.1"
                     /translation="MTPTTLRAVMAALRHPESGCPWDLKQDHQTLARYLREEAAEVLE
                     ALAEHRPGEAATEVHLCEELGDLWLQIAFHAQLAADRGAWDLHDVERTIVDKLVRRHP
                     HVFAEVAVAGAEEVLTNWTAIKREERGQADDHEPRLLEGIPASLSPLDEALEIGHRCA
                     KVGFEWPDLEGVLDKVKEEVAELQAESDPVRVEEEFGDVLFSLMQWARKKGVDPDAAL
                     RKQMVRFKARFASVEDDARAAGGWEQRNLEQMEAAWQAAKRRGKG"
     gene            2601..>2894
                     /locus_tag="VK150_08245"
     CDS             2601..>2894
                     /locus_tag="VK150_08245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31336.1"
                     /translation="MPRLKPFPLAWVLPLLLAAPLAGQGFADEIQVYTNDIQTPGKVG
                     LEVHLNRILKGPKDAPDGLPFNGSWNLTPELSYGLLPSLDIGLYLPTALDTDHH"
BASE COUNT          455 a         1054 c          936 g          449 t
ORIGIN      
        1 catggggagc ctccatggat ggaatttcgg tgcgtagttt actcataagt cagatattgt
       61 ggagacccat ctcacgcccc ctgaaggtcg cattcccggt caggggcgcg ctgctcccca
      121 gcgctttcca gcggaggttc catgcgtgac atccggatcg cggtcattcc tggcgatggc
      181 atcggcaagg aggtggtgcc cgagggcatc cgcgtgctgg aggccgccgc ggcgaagcac
      241 ggcctgcggt tccactggga caccttcccc tggagctgcg aatacttcct cgagcacggc
      301 cgcatgatgc cagaggacgg cctcgaccag atccgccatc acgacgcgat ctttctcggc
      361 gcggtgggct ttccgggggt gcctgaccac gtctcgctgt ggggcctgtt gatccccatc
      421 cgccgggggt tcaagcagta cgccaacatc cgccccgtga aactcatgcc cggcgtgccc
      481 tgccccctcg ccggacggca ggtgggcgac atcgacttca ttgtggtgcg cgagaacaac
      541 gagggcgagt actcctccat cggcggccgg ctctacgagg gcaccgacca ggagatggcc
      601 gtgcagcaga gcgtcttcac ccggcagggc gtggaccgca tcctgaaagt cgccttcgac
      661 atcgcccagt cgcgacccag gaagcacctc acctcggcca cgaaatccaa cggcatcgcc
      721 atcaccatgc cctactggga cgagcgggtg aaagccatgt ccgcggccta ccccggggtg
      781 aaggtggacc agttccatgt ggacatcctc acggcccatt tcgtgcgcaa tccccactgg
      841 ttcgacgtgg tggtgggctc gaacctcttc ggcgacatcc tctcggacct gggccctgcc
      901 tgcacgggca ccatcgccat cgcccccagc gcgaacctga acccggagcg cgcgttcccc
      961 tccatgttcg aaccggtcca cggctccgcg cccgatatct acggcaaggg catcgccaat
     1021 cccatcggcc agatctgggc gggcgccatg atgctcgacc acctggggtg tccagaggcg
     1081 ggcgcttccg tcatggccgc catcgagacg gtgctggcca gcggcctgcg cacccccgac
     1141 atgggcggca cggccagcac caccgacatg ggcaaggcca tcgccgacgc ggtctaggtc
     1201 agcggggccg gatggcggag acagggacgg gcggggcctg cgcccggccc tgccgcgcct
     1261 cgagcagggc ctggagggtg cgcgccgccc tgccccggag gcggatgcgg cgattctcgg
     1321 gccccagctc gaacacggcg gccttccaga aggcccaacg gtcgtccccg atggcctcaa
     1381 tgaggcggac ctgctcccag ggaatggaag ccgggcccag ccagaccatg ggctggaagg
     1441 ggaagggctg cttgaggtgg aggcagcgcc ggcccgcctt caccgacatc ggcgtgtgcc
     1501 cccgccaggc gccgaattcg atctggatcc agcccaggtt ctgctcgatg ggatcggacc
     1561 ggtccgccgg aaaggcctgg tagagggccc ggatgcccag gagacggaag gtgagctggg
     1621 acgtgccgaa gaacatcagg aggaacagcg ggatcacgat ctccaggggc ggcggcgccc
     1681 cccgcgagat cagcagcagc gccatcatcc cttcccccgc cgcttcgcgg cctgccacgc
     1741 cgcctccatc tgctccagat tgcgctgctc ccacccgccc gcggcccggg cgtcgtcctc
     1801 caccgaggcg aagcgggcct tgaagcgcac catctgcttg cgcagcgccg cgtcgggatc
     1861 cacgcccttc ttccgcgccc actgcatgag gctgaacagc acgtcgccga actcctcctc
     1921 cacgcgcacc gggtcggatt ccgcctgcag ctccgccacc tcctccttca ccttgtcgag
     1981 caccccttcg aggtcgggcc actcgaagcc caccttggcg cagcggtgcc cgatctccag
     2041 ggcttcatcc aggggcgaca gcgaggccgg gatgccctcc agcaggcgcg gttcgtggtc
     2101 gtccgcctgg ccccgctcct cgcgcttgat ggcggtccag ttggtgagca cctcctcggc
     2161 cccggccacg gccacctccg cgaacacatg cgggtggcgg cgcaccagct tgtccacgat
     2221 ggtccgctcg acgtcgtgca ggtcccaggc gccgcggtcg gccgccagct gggcatggaa
     2281 ggcgatctgc agccacaggt cgcccaactc ctcgcagagg tggacctccg tggccgcctc
     2341 gccggggcgg tgctcggcca gggcctccag cacctccgcc gcctcctcgc ggaggtagcg
     2401 ggccagggtc tggtggtcct gcttcaggtc ccaggggcag cccgactccg gatggcggag
     2461 cgcggccatg acagcgcgga gggtcgtagg cgtcatggct ccagtgtagg cgggaaggtc
     2521 ggaggtgttc gccgccgccg gaaacccctg gcacaaaacc gctgtctaga ctacgttcgt
     2581 tcgatccccg gagaggtgtc atgccccgat tgaagccctt ccccctggcc tgggttctgc
     2641 ccctgctgct ggccgccccc ctggcgggcc agggcttcgc cgacgagatc caggtctaca
     2701 ccaacgacat ccagaccccc gggaaggtgg gcctcgaggt gcacctgaac cggatcctga
     2761 agggccccaa ggacgcgccg gacggcctgc ccttcaacgg ttcctggaac ctcacgccgg
     2821 agctctcgta cggcctcctc ccctcgctgg acatcggcct ctacctgccc accgccctgg
     2881 acaccgatca ccac
//
LOCUS       DATGWW010000568         2311 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_157541, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000568 DATGWW010000000
VERSION     DATGWW010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157541"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1604
                     /locus_tag="VK150_08250"
     CDS             <1..1604
                     /locus_tag="VK150_08250"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HLP31337.1"
                     /translation="QDLVSNLILCAPDGSFLTLIRTTVGWDLIEGGPSFGPGRGRLTK
                     QVDAPGSQVSWIRLPENYPQDRPWFKEGMVLDRPGWMNHPYQFVGTPMGGLSYLVPVI
                     NLEGARLGLVCLDSTQTRVSRAMAAVLDNPFGRAMITNPAGQVVVPPQWPTMPEAEDA
                     YRVPAVRDIPWAGGLLDQTPKGQAPAEATAVIGGLTFLTYRAPVALGSTFQGELWVAY
                     PMTLPGPFLPGGGLALVVVVGVLLLAWFTYLRWMSRRYDQPMQRLLHSAEAASQGVDV
                     PDLDSDIWELRQVGHSLQLTGRALKARRGLEDQLLQTQRFEVMSALSGGVIHDSNNVL
                     SIVMLRIERALERGWNAQSADDLKEGLDAARRCIAMNRQMLNLGRKEDDTIQWLDLSE
                     CMKDISLLVRPALGREIVLAMDLAPEPLPVAIRTVELTQAVLNLALNARDAMPQGGRL
                     LIRTRRMAGEAHLEVEDGGEGIPEAIQSRIFEPYFTTKPKGKGTGLGLAVVKRVVERH
                     GGRIELHRREGRGQCFLLVFPLAPE"
     gene            complement(1605..2051)
                     /locus_tag="VK150_08255"
     CDS             complement(1605..2051)
                     /locus_tag="VK150_08255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31338.1"
                     /translation="MAKRNEPVRKSVKDTLEDLLAGHREAAFSGPESALKYLRRTFES
                     QGSLPNAVKAVAHDLNAEAFAQTGQWEACVESVGQALGYLPELEAAFPHEYRRMLEGL
                     TCFERGVQANSELGDFHAALELCERAIALGLGAHYTAKRDSLEWAR"
BASE COUNT          363 a          835 c          753 g          360 t
ORIGIN      
        1 agcaggacct ggtctccaac ctcatcctct gcgcgcccga cggcagcttc cttaccctga
       61 tacggaccac cgtcggctgg gatctcatcg agggaggccc gtccttcggc ccaggccgcg
      121 ggcgcctcac caagcaggtg gacgccccgg gcagccaggt gagctggatt cgcctgccgg
      181 agaactaccc ccaggaccgg ccctggttca aggagggcat ggtcctcgac cggcccggat
      241 ggatgaacca cccctaccag ttcgtgggca cccccatggg cggcctctcc tacctggttc
      301 ccgtcatcaa cctggagggc gcgcgcctgg gcctcgtctg cctggacagc acccagaccc
      361 gggtgagccg cgccatggcg gcggtcctcg ataacccctt cggccgggcc atgatcacca
      421 accccgccgg ccaggtcgtc gtcccgcccc agtggcccac catgcccgag gcggaggacg
      481 cttaccgcgt gccggccgtg cgggacatcc cctgggccgg agggcttctc gatcagacgc
      541 cgaaaggcca ggcccccgcc gaagccacgg ccgtcatcgg cggactcacc ttcctcacct
      601 accgcgcacc ggtggccctg ggatcgacct tccagggcga gctctgggtg gcctacccca
      661 tgaccctgcc cggccccttc ctgccaggtg gcggcctcgc cctggtcgtg gtggtgggcg
      721 tgctgctgct ggcctggttc acctacctcc gctggatgag ccgccgctac gaccagccca
      781 tgcagcggct gctgcactcc gccgaggcgg ccagccaggg cgtggacgtg cccgacctgg
      841 attccgacat ctgggagctc cggcaggtgg gccacagcct gcagctcacg ggccgcgccc
      901 tgaaggcccg gcgcggcctg gaggaccagc tgctgcagac gcagcggttc gaggtcatgt
      961 ccgccctgtc cggcggcgtg atccacgatt cgaacaacgt gctctccatc gtcatgctgc
     1021 gcatcgagcg ggccctggaa cggggctgga acgcccagtc cgccgatgac ctgaaagagg
     1081 gcctggacgc cgcccggcgc tgcatcgcca tgaaccgcca gatgctcaac ctcggccgca
     1141 aggaagatga caccatccag tggctggacc tgagcgagtg catgaaggac atcagcctgc
     1201 tggtgcggcc ggccctgggc cgggaaatcg tcctcgccat ggacctggcg cccgaacccc
     1261 tgccggtggc catccgcacc gtggaactca cccaggccgt gctcaacctc gccctcaacg
     1321 ccagggacgc catgccccag ggcggccgcc tcctgatccg gacccggcgc atggccgggg
     1381 aggcccacct ggaagtggag gacggcgggg agggcatccc cgaggccatc cagtcccgca
     1441 tcttcgagcc gtacttcacc accaagccca agggcaaggg cacgggcctc ggcctcgccg
     1501 tggtcaagcg ggtggtggag cgccacggcg gacgcatcga gctgcaccgc cgcgagggcc
     1561 ggggccagtg cttcctcctc gtcttccccc tggccccgga atagctaccg ggcccactcc
     1621 agggaatcgc gcttggccgt gtagtgggcg ccgagcccca gggcgatggc ccgctcgcag
     1681 agctccagcg ccgcgtggaa gtcgcccaac tcgctgttcg cctggacgcc ccgctcgaag
     1741 caggtgaggc cctccagcat gcgccggtac tcgtggggaa acgcggcctc cagctccggc
     1801 aggtagccca gcgcctggcc cacggactcc acgcaggcct cccactgccc ggtctgggcg
     1861 aaggcttccg cgttcaggtc atgggccacg gccttcaccg cgttcggcag actgccctgg
     1921 ctttcgaagg tgcgccgaag gtacttcaag gccgactccg gcccgctgaa cgccgcctcg
     1981 cggtggcccg ccagcaggtc ttccaaagtg tccttcacgg acttgcggac gggctcgttg
     2041 cgcttggcca tgctgttcct aggaaaagac tgagtccaca ggttccacag attgcacaga
     2101 ttaataaagc cagatcgggg tgatccgaag gaggtgagat cgccttcgcc tgaatctgtg
     2161 tgaatcggtg aaatctgtgg accaattctt tattcgtact cgatggtggc cggcggcttg
     2221 ctggtgatgt caaacaccac ccggttgatg ccgcgcactt cgcgcacgat gcgctgggcg
     2281 atgcggtcca gcagctcgtg ggggaggcgg g
//
LOCUS       DATGWW010000569         2431 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_270513, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000569 DATGWW010000000
VERSION     DATGWW010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_270513"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VK150_08260"
     CDS             complement(<1..268)
                     /locus_tag="VK150_08260"
                     /inference="COORDINATES: protein motif:HMM:NF018404.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ClpX C4-type zinc finger protein"
                     /protein_id="HLP31339.1"
                     /translation="MNKYKREQKCSFCGKEPHEVEQLLAGPEAFICNECLEAGQLQLR
                     MSRQGKPLGKHEARLSRPKEIKTFLDDYVIGQEAAKKRLSVAVYN"
     gene            complement(366..836)
                     /locus_tag="VK150_08265"
     CDS             complement(366..836)
                     /locus_tag="VK150_08265"
                     /inference="COORDINATES: protein motif:HMM:NF013440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GreA/GreB family elongation factor"
                     /protein_id="HLP31340.1"
                     /translation="MPKHVLAKLEKELKDIKQALLVEIPQEIARAAGQGDLSENAEYE
                     QALAKRDMFQNKLVTLEKRIAEVASLDISRLPKSRAAYGSKITILDLDSDEEFTYTLV
                     LPEELDGHPQHLSISSPIGMALVGQEEGNEVRVQIPAGIRRFEILELKTIHDVA"
     gene            complement(887..1798)
                     /locus_tag="VK150_08270"
     CDS             complement(887..1798)
                     /locus_tag="VK150_08270"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HLP31341.1"
                     /translation="MLDGVLGHLPWATVQALGEGAGALFYLVDPRHRRIVRENLRLAD
                     LGLDEAQTRALSKACFRHFGALFVSLLRLRHATPEELKRWIKVEGLEHFDAAKAAGKG
                     FIQLTGHYGNWEAIALGQSLHGRTLDAIGRELDNPLLEPISLGFRTRFGNRVILKDGA
                     MRDTLKALKAGRGVGFLLDQDALTTGVWVKFLGQWASTFGTAGSLAARYGLPVLPVFS
                     WPNGDGTTTVRFEAPFEVPVTGDPAKDAWVATQLMTARIEAQIRKDPRWWFWMHRRFK
                     TRPGEGNPLPPPLPPQDWVESVPTSPV"
     gene            complement(1940..>2431)
                     /locus_tag="VK150_08275"
     CDS             complement(1940..>2431)
                     /locus_tag="VK150_08275"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HLP31342.1"
                     /translation="EPYATLAFGTRGFGKRWFPEDRTWPTLMRLLQQRGIRPVLLGGP
                     DEAPLGAALADAVPGALNLAGQTTLPEACAVQASAWGNVAIDTGLAHTAAATGRPTVT
                     LFGPSPEVWVNPIGPRALALRGPDVDCEAAALADFPTHGSSAHRIGPDRVLQVLEILV
                     KES"
BASE COUNT          357 a          777 c          885 g          412 t
ORIGIN      
        1 ggttgtagac cgccacgctc agccgcttct tggccgcctc ctgcccgatg acgtagtcgt
       61 cgaggaaggt cttgatctcc ttgggccggc tgaggcgggc ctcatgcttg ccgaggggct
      121 tgccctggcg gctcatgcgc agctgcagct ggccagcctc caggcactcg ttgcagatga
      181 aggcctcggg tcccgcgagg agctgttcca cctcgtgggg ctccttgccg cagaaggaac
      241 atttctgctc acgcttgtac ttgttcacgc ggcacctcct gtgccgcgcc ctgcgggctt
      301 cggcttggcc aaagtggcac tccgctcctg cttcgtgctc atcttacttc ccttcaaggg
      361 gtggactagg ctacatcgtg aatggtcttg agttccagga tctcgaaacg tcggatgcca
      421 gcggggatct ggacgcggac ctcgttgccc tcctcctggc ccaccagcgc catgccgatg
      481 ggggagctga tgctgagatg ctggggatgg ccgtccagtt cctcggggag caccagcgtg
      541 tacgtgaact cctcgtcgga atccaggtcc aggatcgtga ttttggagcc gtaggccgcg
      601 cgggacttgg gcagtcggct gatgtcgagg ctggccacct cggcgatgcg cttctccaga
      661 gtgacgagct tgttctggaa catgtcgcgc ttggccaggg cctgctcgta ttcggcgttc
      721 tcggagaggt ccccctgtcc cgcggcccgg gcgatctcct gggggatctc cacgagcagg
      781 gcctgcttga tgtccttgag ttctttctcg agcttcgcaa gtacgtgctt gggcatggga
      841 tttccgggaa aggtgggtca aaaaaaggcg ggccgtgggg cccgggtcag acaggggagg
      901 ttggtactga ttctacccag tcctgggggg ggagcggggg cggaaggggg ttcccctcgc
      961 cgggccgggt cttgaagcgg cggtgcatcc agaaccacca gcggggatcc ttccggatct
     1021 gggcctcgat gcgggcggtc atgagctggg tggccaccca ggcatccttg gccgggtcgc
     1081 cggtgacggg cacctcgaag ggcgcctcga agcggacggt ggtggtgccg tcgccgttgg
     1141 gccagctgaa gacgggcagc accggcaggc cgtaccgggc cgccaggctg cccgcggtgc
     1201 cgaaggtgga ggcccactgg cccaggaatt tcacccagac cccggtggtg agggcgtcct
     1261 gatccagcag gaaacccacg ccgcggccgg ccttgagggc tttcagcgtg tcccgcatgg
     1321 ccccgtcctt gaggatcacc cggttgccga accgggtccg gaagcccaat gaaatgggct
     1381 ccagcagggg attgtcgagc tcccggccaa tggcatccag ggtgcgccca tggaggctct
     1441 gccccagggc gatggcctcc cagttgccgt agtggccggt gagctggatg aagcccttgc
     1501 cggcggcctt ggcggcatcg aaatgctcca atccctcgac cttgatccag cgcttcaact
     1561 cttccggcgt cgcgtggcgc aggcggagga ggctcacgaa cagggcgccg aagtggcgga
     1621 agcaggcctt cgacagggcc cgcgtctgcg cctcgtcgag gcccaggtcc gccaggcgca
     1681 ggttttcccg cacaatgcgc cggtgccttg ggtccaccag gtagaacagg gcgccggcgc
     1741 cctctcccag ggcctgcacc gtcgcccagg gcaggtggcc caggacgcca tccagcacgc
     1801 gaaagagccc gtactccagg cggtggcgga ggctgggcgc ggcggcggag atgggggtgg
     1861 gcgtgggaat gggtcggcca aaaaaaaggg gcgcctcggg ggggcgaggc gcggagagtc
     1921 agcttagcag gaaccctgtt caggattcct taacgagtat ttccaacact tgtagcacac
     1981 ggtcggggcc gatccggtgg gcgctcgacc cgtgggtggg gaagtccgcc agggccgcgg
     2041 cctcgcagtc cacatccggc ccccgcaggg ccagggcccg ggggccgatg gggttcaccc
     2101 acacttccgg gctgggcccg aagagggtca ccgtgggccg gcccgtggcc gccgccgtat
     2161 gggccaaccc ggtgtcgatg gccacgttgc cccaggccga ggcctggacc gcgcaggcct
     2221 cgggcagggt ggtctgcccg gccaggttca gggcgccggg caccgcgtcc gccagggccg
     2281 ctcccagggg cgcctcgtcg ggcccgccca gcagcacggg gcggatgccc cgctgctgga
     2341 gcagccgcat cagggtgggc caggtgcggt cctcggggaa ccagcgcttg ccgaagcccc
     2401 gggtgccgaa ggccagggtc gcgtagggct c
//
LOCUS       DATGWW010000570         3196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_270690, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000570 DATGWW010000000
VERSION     DATGWW010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3196
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_270690"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1179)
                     /locus_tag="VK150_08280"
     CDS             complement(<1..1179)
                     /locus_tag="VK150_08280"
                     /inference="COORDINATES: protein motif:HMM:TIGR00757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HLP31343.1"
                     /translation="MSPKKTMMINATDPEEIRVATLVDGVLFDYDVEFLHNEKIKGNL
                     YKARVVRVDTSLQAAFVHFGGQKNGFLPLGELPRDMSGDGRRGRIQDVLQRDQEILVQ
                     AVREELGSKGAMMTGQISLAGRYLVITPGNPVNGISRKIEATEERRHFKQLVDTLDIP
                     EDIGVIVRTASLGVTKEDFERDLEYLLDTYKEVLNRYKHRHGVGLVWQEDDVVTRTLR
                     DTFSADVEEVQIDDEDTFHAAQSFFKRTMPQHLDVLKHYTGKKPLFSRHQLEEQIDRV
                     YGRKVGLPSGGALVLDQTEALVAIDVNSGKTSGDGVEDMAFKTNMEAAEEVARQLRLR
                     DLAGLIAIDFIDMKRESHIRAVQDKLVDCLKADKARMEVGKINRFGVLVMTRQRIRPS
                     L"
     gene            1509..2483
                     /locus_tag="VK150_08285"
     CDS             1509..2483
                     /locus_tag="VK150_08285"
                     /inference="COORDINATES: protein motif:HMM:TIGR02136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein"
                     /protein_id="HLP31344.1"
                     /translation="MRIRFLAQTLLATLVGLTATAQTVKVDPKVTTYKKVSGISGNLN
                     SIGSDTLNNLMAFWVEGFNKKYPNVKIQVEGKGSTTAPPALIESTSQLGPMSREMKNE
                     EIDKFEKKFGYKPTKVAVAIDALAVFVNKNNPVKSLSLQQVDAIFSKTRKGGAAKDLK
                     TWGDLGLAGDLAARPLSLYGRNSASGTYGYFKEHALFKGDYKDSVKEQPGSSSVVQSI
                     GSDRFGIGYSGIGYATSGVRALPLSDEKKNGGAAFAATYENALNGKYPLSRFLYIYIN
                     KDPKKPMDPLTREFLRFVLSKEGQEIVVKDGFLPLTAKMETDELAKLK"
     gene            2565..>3196
                     /locus_tag="VK150_08290"
     CDS             2565..>3196
                     /locus_tag="VK150_08290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31345.1"
                     /translation="MPSLPSHQTRAQRMDRFMAFTISGGGILIIGAVLAMLLFILKEA
                     LPLFAPATVKRAGTVQAAPSDGAWLDESGKAAVLASRTGGLSALRLPEGTALPVPSEG
                     PALPWRALLPPDTRGETLVIGVDGRMSVARLAWSKPAGENDPAQWTLEPHWQGGIPLK
                     AFPEAILHFRLLGGGGLDGGQTLRVVARFPEGLAWLETPLDATSAPAWAP"
BASE COUNT          526 a         1104 c         1028 g          538 t
ORIGIN      
        1 gaggctgggc cggatgcgct ggcgggtcat gaccagcacg ccgaagcgat tgatcttccc
       61 cacctccatg cgggccttgt cggccttgag gcagtccacc agcttgtcct ggacagcgcg
      121 gatgtgggat tcgcgcttca tgtcgatgaa gtcgatggcg atgaggccgg ccaggtcgcg
      181 caggcggagc tggcgcgcca cttcctcggc ggcttccatg ttggtcttga aggccatgtc
      241 ctccacgccg tcgcccgagg tcttgccgct gttgacgtcg atggccacca gggcctcggt
      301 ctggtccagc accagggcgc cgccgctggg caggcccacc ttgcggccgt agacgcggtc
      361 gatctgctct tccagctggt gccgggagaa caggggcttc ttgccggtgt agtgcttcag
      421 cacgtcgagg tgctggggca tcgtgcgctt gaagaaggac tgggcggcgt ggaaggtgtc
      481 ctcgtcgtcg atctgcactt cctccacgtc ggcgctgaag gtgtcgcgca gggtgcgggt
      541 gacgacgtcg tcctcctgcc acaccaggcc gacgccgtgg cggtgcttgt agcggttgag
      601 cacttccttg taggtgtcca gcaggtactc gaggtcgcgc tcgaagtcct ccttggtgac
      661 gcccaggctg gcggtgcgga cgatgacgcc gatgtcctca gggatgtcga gggtgtccac
      721 cagctgcttg aagtgccggc gctcctcggt ggcctcgatc ttgcggctga tgccgttgac
      781 ggggttccct ggcgtgatca ccaggtagcg gcccgccagg ctgatctggc cggtcatcat
      841 ggcgcccttg gagcccagct cctcacgcac ggcctgcacc aggatctcct ggtcccgctg
      901 cagcacatcc tggatgcggc cgcggcggcc atcgccgctc atgtcgcggg gcagctcgcc
      961 caggggcagg aagccgttct tctggccccc gaagtggacg aaggcggcct gcaggctggt
     1021 gtccacgcgg accacccggg ccttgtagag gttgcccttg atcttctcgt tgtggaggaa
     1081 ctcgacgtcg tagtcgaaca gcacgccgtc caccagcgtg gccacgcgaa tctcttccgg
     1141 atccgtggca ttgatcatca tggttttctt ggggctcaag gaggctcctc tcggggccca
     1201 ggtacctggc tgcggcttac gcccggcagg ctcggcggcc ctggggtggg atgtcttgga
     1261 tggtggaacg ggaaactgaa gggggccctg ccctgacttc agccacccgg agggaaaaaa
     1321 tcgggatggt cacgatccag gtgcgtgggc tgatgcctcg tacggcacgc aggatcttca
     1381 atcattaaac ccacttgttc tcggggaggc aagcttcatc ccaaaaggcg aagttacagg
     1441 gaagtcacag gccggcccgc ggggcttcac ggccggcccc cagcatcaag gccatgaagg
     1501 aggcatccat gcggatccga ttcctggccc agaccctgct ggccaccctg gtgggcctca
     1561 ccgccaccgc ccagaccgtc aaggtggacc cgaaggtcac cacctacaag aaggtgtccg
     1621 gcatcagcgg aaacctcaac tccatcggct ccgacaccct gaacaacctc atggccttct
     1681 gggtggaggg cttcaacaag aagtatccca acgtgaagat ccaggtcgag ggcaagggct
     1741 cgaccaccgc cccgccggcc ctcatcgaga gcaccagcca gctgggcccc atgagccgcg
     1801 agatgaagaa cgaggagatc gacaagttcg agaagaagtt cggctacaag cccaccaaag
     1861 tggccgtggc catcgacgcc ctggccgtgt tcgtgaacaa gaacaacccg gtcaagtccc
     1921 tcagcctcca gcaggtggac gccatcttct ccaagacccg caagggcggc gccgccaagg
     1981 acctgaagac ctggggcgac ctgggcctcg ccggtgacct ggcggcccgt cccctcagcc
     2041 tctatggccg caacagcgcc agcggcacct atggctactt caaggagcac gcgctcttca
     2101 agggcgacta caaggattcc gtgaaggagc agcccggttc ctcctccgtg gtccagagca
     2161 tcggctccga ccgcttcggc atcgggtaca gcggcatcgg ctacgccacc tccggcgtgc
     2221 gggcccttcc cctgtccgac gagaagaaga acggcggggc cgccttcgcc gcgacctacg
     2281 agaacgccct gaacgggaag taccccctct cccgcttcct ctacatctac atcaacaagg
     2341 atcccaagaa gcccatggat cccctgaccc gcgagttcct gaggttcgtc ctcagcaagg
     2401 aaggccagga gatcgtcgtc aaggacggct tcctgcccct caccgccaag atggaaaccg
     2461 acgagctggc caagctgaag tagccgacca ccgcagtggg cgtgccgggg gctcccccgg
     2521 cacgcctgtt tgcggatcct gccgttccac ccggacgaga ccccatgccc agcctcccca
     2581 gccaccagac gcgcgcccag cgcatggacc ggttcatggc cttcaccatt tccggtggcg
     2641 gcatcctgat catcggcgcc gtgctggcca tgctcctgtt catcctgaag gaggcgctgc
     2701 ccctgttcgc gcccgccacc gtgaagcgcg cgggcactgt gcaggcggct ccctctgacg
     2761 gtgcctggct ggatgaatcg ggcaaggcgg cggtgctcgc ctcccggacc ggcggcctga
     2821 gcgccctgcg cctgcccgag ggcaccgccc tgccggtgcc ctcggaaggc ccggccctgc
     2881 cctggcgcgc cctcctcccc cccgacaccc ggggcgaaac cctggtcatc ggcgtggacg
     2941 ggcggatgtc cgtggcccgc ctggcctggt ccaagcccgc cggcgagaac gaccccgccc
     3001 agtggaccct ggaaccccac tggcagggcg gcatccccct gaaagccttc cccgaagcga
     3061 tcctgcactt ccgcctgctg ggcggcggcg gcctggacgg cgggcagacc ctccgcgtgg
     3121 tggcccggtt tccggagggc ttggcctggc tggagacgcc gctcgacgcg acctccgcac
     3181 ccgcctgggc ccccat
//
LOCUS       DATGWW010000571         2191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_201817, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000571 DATGWW010000000
VERSION     DATGWW010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201817"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..319
                     /locus_tag="VK150_08295"
     CDS             <1..319
                     /locus_tag="VK150_08295"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLP31346.1"
                     /translation="GATAGPAYLNPSKGYKSRFLSFPGGARLELMNTSALDPVRAVAG
                     AQRMGLTHLAFSVGSEAQVDALTRRLSEDGVRVLDGPRRTGDGYYESVVLDPEGNRIE
                     ITA"
     gene            385..825
                     /locus_tag="VK150_08300"
     CDS             385..825
                     /locus_tag="VK150_08300"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLP31347.1"
                     /translation="MLTSDRHPYSISTETHRMDVGAVHAFLSRSYWSPGIPREKVQRA
                     IDHSLCFGIFHGADQVGFARVITDRTTFAYLADVYVLEDHRGKGLSKWLMDVIQAHPD
                     LQGLRRFMLATRDAHGLYRQFGFREAAHPSRLMEIVNPDAYRAS"
     gene            955..1398
                     /locus_tag="VK150_08305"
     CDS             955..1398
                     /locus_tag="VK150_08305"
                     /inference="COORDINATES: protein motif:HMM:NF024917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLP31348.1"
                     /translation="MQIKRLAPTDRDRARALFEVMARVFGEARRPLGDRYLDRLLRRS
                     SFWALVALHEGEVVGGLTAHALPMTTSEVSELLIYDLAVREDHQRKGIGRQLLAALRT
                     AAAEQGIGMLYVPVDDGDAHALEFYRAVGGEATPVTFFLFHQAGA"
     gene            1478..2014
                     /locus_tag="VK150_08310"
     CDS             1478..2014
                     /locus_tag="VK150_08310"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLP31349.1"
                     /translation="MTTTLTIRDLQPGEFEGLGRLMVEVYSKLEGFPTPQEQPRYYEL
                     LANIGRFAEKRDARVLVALTAEGELVGGVVYFGDMAEYGSGGTATAEKHASGIRLLGI
                     HPRFRGQGAGRALTQACIDLAREQGHGQVILHTTEAMRVAWGLYERLGFTRSEDLDFS
                     QQGLQVYGFRLPLTGKQP"
     gene            2011..>2191
                     /locus_tag="VK150_08315"
     CDS             2011..>2191
                     /locus_tag="VK150_08315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31350.1"
                     /translation="MKRVVGIGGIFIKAADPVALRDWYQRHLGVDVQDWGGAVFPNDR
                     PGGMTVWNLFPETTDY"
BASE COUNT          347 a          732 c          759 g          353 t
ORIGIN      
        1 cggcgcgacg gcgggcccgg cctacttgaa tccgtccaag ggctacaagt cgcgcttcct
       61 atccttcccg ggcggcgccc gtctcgagct catgaacaca tcggcgctgg accccgtccg
      121 ggccgtggcg ggggcccagc gcatgggact cacccacctc gccttctcgg tgggatccga
      181 ggcgcaggtg gacgccctga cgcgccggtt gagcgaggat ggggttcggg tcctggacgg
      241 ccctcgccgg actggcgacg ggtactacga gagcgtggtg ctggatccgg aaggaaaccg
      301 gatcgagatc acggcctgac gccgcaggtc ctggcagcac cggtgtcaac ctgagttcat
      361 ccaccagcca cccgcggggt tcgcatgctc acctccgacc gccatccgta ttcgatttcc
      421 accgagactc accgcatgga tgtcggggct gtccacgcgt tcctctccag aagctactgg
      481 tcgcccggca ttccgcgcga gaaggtccag cgggccatcg accactctct ctgtttcgga
      541 atcttccacg gggcggatca ggtcggattc gcacgtgtca tcaccgaccg gacgaccttc
      601 gcctacctcg ccgatgtcta tgtcttggag gaccaccggg gcaaaggcct gtccaagtgg
      661 ctgatggacg tgatccaggc gcaccccgac ctgcagggcc tgaggcggtt catgctggcc
      721 acccgggatg cccacgggct ctaccgccag ttcgggttca gggaggccgc ccacccctcg
      781 cgcctcatgg aaatcgtcaa tccggacgcc taccgggcgt cttgagcaac ctccgatggt
      841 ggcgccaggc cacccacccc ctccgaaaac cgaccctcgg ggagggggcc tcatccccga
      901 ccggcggcga ggatggctga tggatcggag gttccagcag ggaggggggc agccatgcag
      961 atcaagcgac tcgcgccgac agaccgggac cgtgcccggg cactgttcga ggtgatggcc
     1021 agggtcttcg gcgaggcgcg ccggccgctg ggggaccggt acctggaccg gctcctgcgc
     1081 cgatcctcct tctgggccct ggtggccctg cacgagggcg aggtcgtggg gggtctcacg
     1141 gcccacgcgc tgcccatgac cacctcggag gtctcggagc tgctcatcta cgatctggcc
     1201 gtgcgggagg accaccagcg gaaggggatc ggccggcagc tcctggcggc gctcagaaca
     1261 gccgccgccg agcaggggat cgggatgctc tacgtgccgg tggacgacgg ggacgcccat
     1321 gccctcgagt tctaccgggc ggtggggggc gaggcgactc cggtgacctt cttcctcttc
     1381 catcaagcgg gggcttgaaa cggccgccgc cgctgccccg ggccgagggc ctgattgcgg
     1441 ggtgggttac cctcttcgag acgcgaggaa cacccgcatg accaccaccc tcaccatccg
     1501 tgacctccag cccggcgagt tcgaggggct ggggcggttg atggtcgagg tgtactcgaa
     1561 gctggaaggc tttcccacgc cccaggagca gccccgctac tacgagctgc tggcgaacat
     1621 cggccgcttt gcggagaaga gggacgcgcg ggtgctggtg gccctcaccg ccgaaggcga
     1681 gctggtcggc ggggtggttt acttcggcga catggccgag tacggatccg gcggaaccgc
     1741 cacggcggag aagcatgcct ctggcatccg gctgctcggg atccatcccc ggttccgcgg
     1801 ccagggggcg gggcgggccc tcacccaggc ctgcatcgac ttggcgcggg agcaggggca
     1861 cggccaggtc atcttgcaca ccaccgaggc catgcgcgta gcctggggcc tctacgaacg
     1921 gctggggttc acgcgatcgg aagacctgga cttctcccag caggggctcc aggtctatgg
     1981 cttcaggctt ccactgacgg ggaaacaacc atgaaacgag tcgttggcat cggggggatt
     2041 ttcatcaagg ccgctgatcc ggtggcgctc cgggactggt accagcgcca tctgggcgtc
     2101 gacgtgcagg actggggcgg cgccgtgttt cctaacgacc gccccggcgg catgacggtg
     2161 tggaacctgt tcccggagac gacggactac t
//
LOCUS       DATGWW010000572         4206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_118743, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000572 DATGWW010000000
VERSION     DATGWW010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4206
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118743"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1692)
                     /locus_tag="VK150_08320"
     CDS             complement(<1..1692)
                     /locus_tag="VK150_08320"
                     /inference="COORDINATES: protein motif:HMM:NF013395.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunoglobulin domain-containing protein"
                     /protein_id="HLP31351.1"
                     /translation="MKVVTRLALWSLCLALLGMGSTTVWSQPATNEKNHGRHSGWEHK
                     PNHIRILTQPASQTVVLGQPVDFTVEAVGKPARLHYQWRKDGVRLDAHTATYHIAATT
                     PASAGSYTVTVSNPTGHVTSARAVLTLNAPPVIQAQPASLTVVQGGTATFSVSASGSG
                     TLGYQWRKGGNPVAGATAASLTLASVTAGDAGSFDVVVTNALNGTVTTTTSQAATLQV
                     NVPPTITSQPLSQTVDLGSGATFAVAATTNGGTLSYQWRKDGQPLAGATLDTFTLAAV
                     AGTDAGTYDAVVSNSLNGTTTTATSLGAVLTVHEPPTIQTQPQSRTVQPPDAVTFTVA
                     ALSNHGGPLTYTWKKNGTAIPDATSASYTVASTEFPTNGDAYSVLVSDGVFSVESQTV
                     YAQASVPSPVYAGDPVPVPSRPLTVLPSFHVDPVQFPNGAFRLGYDEALKNPVWTAYV
                     NFPVHQPYANSQADYTQDLRLAAPQVGKTDYNGIYTGGAGVPNSYDRGHQVPRADISY
                     RYTPVAGDDATMMSNLVPQISQFNQQTWQRLEEAIGGNQGGDTDGLTSFKGRVWVY"
     gene            complement(1965..2708)
                     /locus_tag="VK150_08325"
     CDS             complement(1965..2708)
                     /locus_tag="VK150_08325"
                     /inference="COORDINATES: protein motif:HMM:NF016296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLP31352.1"
                     /translation="MKPLKVLVVDDEPLARERLSRLLQEAGCELIGELGDGVALLDWL
                     KAPHDVVDVIFLDIQMPGLSGLEVLAEVPDGPPVVFVTAYSSYAVRAFELAAVDYLLK
                     PVFEDRLGKCLQRLRDRLVRRLSPSELKALVPAPVRFPIRVEDGEIYMELDHITHFEL
                     DSDHVWACRGLNRYLTRWATLAEVEQAFPDDGMLRIQRHLLLRPGMVKGIRPASVGRI
                     KVMVAPKVELVVSRAMTPRTKECVRSNAQ"
     gene            complement(2677..3540)
                     /locus_tag="VK150_08330"
     CDS             complement(2677..3540)
                     /locus_tag="VK150_08330"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HLP31353.1"
                     /translation="MRSPWGFILGLISSIIGCEFVAVLLPLLDGWLYTRAHVVFDGSR
                     LVVLYVALVGPAMMVVGGLIAARVHAEELRKASEAEAHIAKNRLLQGQVHPHVLFNAL
                     NGLAELVHKDPKAAEGAIRHLSDLLRRILVASEHARMPLSEERKVVSDFLALEAIRLG
                     DRLRVTWEWDTRLDGIELPPLLLQPLVENAIKHGISPSIPGGDLVLRAHAREGAIILE
                     VWNSGKPFRDSGGTSGIGVRNLRSRLALTFGDKASLFIGPSTPGTLARITIEATQVEF
                     PHEAAESPGRR"
     gene            complement(3803..3976)
                     /locus_tag="VK150_08335"
     CDS             complement(3803..3976)
                     /locus_tag="VK150_08335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31354.1"
                     /translation="MSNALSFRKESIQRSSSASAPANRLQGADAGVQGMRAPHDPKIP
                     AITTILTLTIPTL"
BASE COUNT          672 a         1256 c         1557 g          721 t
ORIGIN      
        1 gtagacccac acgcggccct tgaaggaggt gaggccgtcg gtgtcgccgc cctggttgcc
       61 gccgatggcc tcttccaggc gctgccaggt ctgctggttg aactgggaga tctggggcac
      121 gaggttcgac atcatggtgg cgtcgtcgcc ggccacgggg gtgtagcggt acgagatgtc
      181 cgcccggggc acctggtggc cgcggtcgta gctgttgggc acgccggcgc cgccggtgta
      241 gatgccgttg tagtcggtct tgccgacctg cggggccgcc agccggaggt cctgggtgta
      301 gtcggcctgg gagttggcgt agggctggtg gaccgggaag ttcacgtagg cggtccagac
      361 ggggttcttc agggcctcgt catagccgag gcggaaggcg ccgttgggga actgcacggg
      421 gtccacgtgg aaggagggga gtacggtgag gggacggctc ggcacgggca cgggatcgcc
      481 ggcgtagacc ggggagggca cggaggcctg ggcgtagacg gtctggcttt ccacgctgaa
      541 cacgccgtcg ctcacgagga ccgagtaggc gtcgccattg gtggggaatt ccgtcgaggc
      601 cacggtgtac gaggcgctgg tggcatcggg gatggcggtg ccgttcttct tccaggtgta
      661 ggtgaggggg ccgccgtggt tggacagggc cgccaccgtg aacgtcacgg cgtcgggggg
      721 ctggacggtc cggctctggg gctgggtctg gatggtgggc ggctcgtgga ccgtgagcac
      781 cgcgccgagg gacgtggccg tcgtggtggt gccgttgagg ctgttggaca ccactgcgtc
      841 gtaggtgccc gcgtccgtgc cggccacggc ggcgagggtg aaggtgtcga gggtcgcgcc
      901 ggccaggggc tggccgtcct tgcgccactg atagctcagc gtgccgccgt tcgtggtggc
      961 ggccacagcg aaagtcgcgc cgctgccgag gtccaccgtc tgggacagcg gctggctggt
     1021 gatggtcggg gggacgttga cctggagtgt cgccgcctgg gaggtcgtcg tggtgaccgt
     1081 gccgttcagc gcgttggtca ccaccacgtc gaagctgccc gcgtctcccg cggtcaccga
     1141 ggcgagggtc aggctggcgg ccgtggcgcc ggcgacggga ttgccgccct tgcgccactg
     1201 gtagccgagg gtgccagagc cgctggcgga gaccgagaag gtggcggtgc caccctggac
     1261 caccgtgagg ctggcgggct gggcctggat gacggggggc gcgttgaggg tcagcacggc
     1321 ccgcgcgctg gtcacgtggc cggtggggtt gctcacggtc accgtgtagg aaccggcgct
     1381 ggcgggagtc gtggccgcga tgtggtaggt ggcggtgtgg gcatcgagcc gcacgccatc
     1441 cttccgccac tggtagtgga ggcgcgcggg cttgcccacg gcctcgaccg tgaagtcgac
     1501 cggctggccc agcaccaccg tctggctcgc gggctgggtg aggatgcgga tgtggttggg
     1561 cttgtgttcc caccctgaat gccgcccatg gttcttctca tttgtggcgg gctgtgacca
     1621 aacggtggtg gaacccatgc cgagcaaggc taggcacagg ctccagagag caagtcgcgt
     1681 gacgaccttc atggtggtct cctgaggaca cggtgttgat gacagaaaaa tcatctaacg
     1741 aggtgcactc ggaggcttgt taatttttgc taaggtcgcg taaaaaaagt gaaacttccc
     1801 accttgcggg aaggggcgga atcgacgcag ggcgcggcag atggctcctg cgggcgagct
     1861 tgcggccctc gacctttccc tggttcaggg gcagccgatc cgggcgggat ccctgaattc
     1921 gacggcccgg cgtggaaaag gggcggtcgc ctgggcgagg ccgatcactg cgcgttggac
     1981 cggacgcatt ccttggtgcg gggagtcatg gcgcggctga cgaccagctc caccttgggc
     2041 gcgaccatga ctttgatgcg gccgacggag gctgggcgga tccccttcac catcccgggg
     2101 cgcaggagga ggtggcgctg gatccggagc atgccgtcgt ccggaaaggc ctgctcgact
     2161 tccgccaggg tcgcccagcg ggtcaggtac cggttgaggc cccggcaggc ccagacgtgg
     2221 tcgctgtcca gctcgaagtg ggtgatgtgg tccagctcca tgtagatctc gccatcctcc
     2281 acccggatgg gaaatcgcac gggggctggc acgagcgcct tcaactcgga ggggctgagc
     2341 cgccggacca gccggtcgcg gaggcgctgc aggcatttgc cgaggcgatc ctcgaacacc
     2401 ggtttcagca gatagtccac ggcggcgagt tcgaaggcgc ggaccgcgta ggacgagtag
     2461 gccgtgacga acaccaccgg cggcccgtcg ggcacttcgg ccaggacttc cagcccgctg
     2521 agcccgggca tctgaatgtc gaggaagatg acatccacca catcgtgggg cgccttcagc
     2581 cagtcaagca gcgccacccc gtcgccgagt tcgccgatga gctcgcaacc cgcctcctgg
     2641 agcaggcggg agagccgctc cctcgccagg ggctcatcat cgacgaccag gactttcagc
     2701 ggcttcatgg gggaattcta cttgagttgc ctcgatggtg atgcgggcga gggtgccggg
     2761 cgtggagggg ccgatgaaga ggctggcctt gtcgccgaag gtcaacgcca gcctcgacct
     2821 gaggttccgc acgccaatgc cgctcgttcc gccgctgtcg cggaagggtt tcccggaatt
     2881 ccacacttcg agaatgatgg ccccctccct ggcgtgcgcc cgcagcacca ggtcgcctcc
     2941 cgggatgctg ggcgagatcc cgtgcttgat ggcgttctcg accagaggct ggaggaggag
     3001 cggcggcagc tcgatgccgt ccaggcgcgt gtcccactcc caggtgacgc gcagccggtc
     3061 tccgagccgg atggcttcca gggccaggaa gtcggagacg accttccgct cttcgctcag
     3121 gggcatgcgc gcgtgctcgg aggccacgag gatccgccgc agcaggtccg acaggtgccg
     3181 gatggcgccc tcggcggcct tcggatcctt gtggaccagc tccgcgaggc cgttcagggc
     3241 gttgaacagc acatgggggt ggacctggcc ctggaggaga cggttcttgg cgatgtgggc
     3301 ctccgcctcg gaagccttcc ggagctcttc cgcatggacg cgggcggcga tgagtcctcc
     3361 cacgaccatc atggctggac cgaccagggc gacatacagg accacgagcc tggagccgtc
     3421 gaagacgaca tgcgcccggg tgtacagcca cccatcgaga agcggcagga ggaccgccac
     3481 aaattcgcag ccgatgatcg aggagatgag ccccagaatg aatccccacg gagatcgcat
     3541 tcgacggaag aggatccagg gcagcggggc catgaacgcg aaggcgcaaa tgtgggtgag
     3601 gggagctgtg atgatgctcg cccagatcca tcctgaggcg atccgggtgg acgcccagtg
     3661 accatgcaga agaaacagga cccagagtag atagcagacc cccatcagtc gccagttttt
     3721 atgcagaggg aacagggcag cccaggtgaa cgccgactga cggctccttt ccgcctccaa
     3781 ttcggcgaag gtgaagtgct cgtcagaggg tggggatggt gagagtgaga atggtcgtga
     3841 tcgcggggat cttcgggtca tggggcgctc tcatgccctg gacgcccgca tccgcacctt
     3901 gcaggcggtt ggccggcgcg ctggctgaac tcgagcgctg gatggattcc ttgcggaagg
     3961 aaagtgcgtt gctcatggcg gctccctggc agcgcgttct ggcgcgacct tggttctgag
     4021 cccttttccg gggatatcca acgcctttcc atcaacggta tctaaccacg acttcaaccg
     4081 ttgggacctg cggacactac cgttcggtgg tctggcgggc gccatcctaa gaaggctgtt
     4141 ctcctgattg cagaacctcc ctggaagcga ccgcccatgc ccttttcctc cacctgccag
     4201 gccgcg
//
LOCUS       DATGWW010000573         5541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_359952, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000573 DATGWW010000000
VERSION     DATGWW010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5541
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_359952"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..417
                     /locus_tag="VK150_08340"
     CDS             <1..417
                     /locus_tag="VK150_08340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31355.1"
                     /translation="GCRTPMPWTADAPHGGFSEVEAWLPMSPEHLKRSVAGQTADPDS
                     VLAFYRRFLAWRKGSEALCRGAIHFHQTSEPILALRREDGPERVLAVFNLSPAPAQYT
                     LQAKAVPFEGHGLASGRLEGRVLHLPPWGGFFGRLA"
     gene            495..1853
                     /locus_tag="VK150_08345"
     CDS             495..1853
                     /locus_tag="VK150_08345"
                     /inference="COORDINATES: protein motif:HMM:NF014335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HLP31356.1"
                     /translation="MNRLSLLKAALPMALVCGPLLAQDVVEIHGYTRAGVGRSSNGGE
                     QVSFFMANTGGSPTGGPGYRLGNETDNYLELAVDVRAYEKGNTTFKLHFRPAFREYYQ
                     VRDASADAGGDVDNSKSPSPNQQVWIREAWGEATGIFGTTGAFKDASIWAGRRFYMRQ
                     DLHMRDQWYWNNSGDGVGIENIDLGPVKMHYAYIQHDTGNVNSDWNNGAIRGVLAPYS
                     QWVGGAGHTIIGSHDLRFSDIKLWEGGSLTLGVQFNDAHPKSGTENDGNKNDGTQFNV
                     ILNQAGVLGGDNRVYATYGNGSTYWNWYNPDVKTENKWWHVMDAFYIKPMANLEMQGV
                     VQYRKQNGEGTMKDSTNAWTSIGVRPVYFFTKHFSVAYEVGLDKLKFDNETEARKLMK
                     NTIALQWSPQASFWSRPVIRLFATRADWNKNANNWNKIGEGQFGNAMQGMTFGAQIEA
                     WW"
     gene            1928..3613
                     /locus_tag="VK150_08350"
     CDS             1928..3613
                     /locus_tag="VK150_08350"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HLP31357.1"
                     /translation="MTFRPVPTALLLAGLLTGGLGCHGPSTETSSRYPVDTTTIAPGQ
                     QLEGAPGWYNDAVIYHIWVKAFADGVYGDGIGDLPGIQARLDHLQSLGVNTLWLSPIF
                     ECDYKGANMHGYDTTDYYAVNDRFGTRADLKALIDAVHARGMRILFDFVPNHTSTKHP
                     WFTDAVTRDSWYLWKSTQEASWGFPWGGGTTQDVWKQSGDRYFYTSFGVTSLADLNFY
                     NPAVQSEMRKVQAYWLDRGFDGMRVDAVRYLCESGPGQAADQADTHARLQAFRALLDE
                     YDSGDLHPHPGGDPARHSSKVMLAEAWTNGPIGVAPYFGSGANEFHLCLDFSAPWAIS
                     DAITKGDGAKVTALWELEQQTFPAGQRSATFDSNHDNLISRPGTQYGGAKAKVILAEA
                     LTLLSPGTPILYYGNEIGMTGQSGTDLNLRQPMDWAAVATQSGQPDSILSWCKYLIQA
                     RRAYPALRGGYATLATDVGPGKALAYLRDAGTERVLVVANLSAATQTVVVSGLTAHGV
                     PSGGPVQAVLGDLKGVAALSGDAYTATSIPPYGVRVLYVAGSGFQTTLHGDLP"
     gene            3684..4781
                     /gene="ugpC"
                     /locus_tag="VK150_08355"
     CDS             3684..4781
                     /gene="ugpC"
                     /locus_tag="VK150_08355"
                     /inference="COORDINATES: protein motif:HMM:NF008653.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HLP31358.1"
                     /translation="MANLQFQALRKSFGDSEILHGIDLEIQDGEFIVFVGPSGCGKST
                     LLRCIAGLEEITSGELSIGGQKVNDVPPSKRGIAMVFQSYALYPHMTVAENMAFGLKL
                     AGHSKTEIASAVNRAAEILQIESLLDRRPKALSGGQRQRVAIGRAIVRKPGVFLFDEP
                     LSNLDAGLRVQMRVELARLHKDLATTMVYVTHDQVEAMTLAHRIVVLNQGRIEQVGSP
                     LELYHHPANRFVAGFIGSPKMNFLPCHLVAAKEGGATVRLEDGTLLTAGADARGLAEG
                     TPLTLGIRPERLQAETTGGEGTARTTVLVAEHLGDTVFLYVQAPGGTGQLTVKAQPEN
                     PLRTGDETHLRFPAKHCLLFGPDDQTLPRLL"
     gene            4837..>5541
                     /gene="malE"
                     /locus_tag="VK150_08360"
     CDS             4837..>5541
                     /gene="malE"
                     /locus_tag="VK150_08360"
                     /EC_number="7.5.2.1"
                     /inference="COORDINATES: protein motif:HMM:NF007011.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015144 - carbohydrate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter
                     substrate-binding protein MalE"
                     /protein_id="HLP31359.1"
                     /translation="MSHPIKFRKLATTAALCIIAGACTLAPAAEKGKLLIWINGDKGY
                     NGLQKVGDEFTKKTGIKVVVEHPEDAPGKFQQAAEEGKGPDIWMWAHDRVGEWAESGV
                     INAVNPGKKIKDDIDPTAWQAFTIKGKVWAYPVAIEAVSLIYNKNLVKTPPKTFEEIF
                     ALDKKFAAQGKKAILWDYTNTYFTMPMLAANGGYAFKMKADGTYDPKDTGVNNAGALK
                     GAELLTKMVKEGVMPKG"
BASE COUNT         1001 a         2030 c         1706 g          804 t
ORIGIN      
        1 ggctgccgca cgcccatgcc gtggactgcc gacgcccctc acggcggatt ttccgaagtg
       61 gaggcctggc tgcccatgtc gccggagcac ctcaagcgat ccgtggcggg ccagacggcc
      121 gaccccgact ccgtgctggc cttctaccgc cgcttcctgg cctggcgcaa gggctcggaa
      181 gccctctgcc gcggcgccat ccatttccac cagacctcgg agccgatcct cgcccttcgc
      241 cgggaggacg gcccggagcg cgtcctggcg gtcttcaacc tcagtcccgc cccggcccag
      301 tacaccctcc aggccaaggc cgtgcccttc gaggggcacg gcctggcctc gggtcgtctc
      361 gagggtcggg ttctccacct tcccccttgg ggaggcttct tcggtcgtct ggcctgaacc
      421 ccatgcgccg acccctctcc gccccctgcc actcacccag ccgccacgcg gcttctcaca
      481 ctggaggcaa gaccatgaac cgtctttccc tactcaaggc cgcgctgccc atggcgctgg
      541 tctgcggacc cctcctcgcc caggacgtgg tcgagatcca tggctacacc cgcgccggcg
      601 tcggccgctc gtccaacggc ggcgagcagg tgtccttctt catggcgaac accggcggca
      661 gcccgacggg cggcccgggc taccgcctcg gcaatgagac cgacaactac ctcgagctgg
      721 ccgtcgacgt ccgcgcctac gagaagggca acaccacctt caagctccac ttccgccccg
      781 ccttccgcga gtactaccag gtgcgcgacg cctcggccga tgccggcggc gacgtggaca
      841 acagcaagag cccgagcccg aatcagcagg tgtggatccg tgaagcctgg ggcgaggcca
      901 ccggcatctt cggcaccacc ggcgccttca aggacgcctc catctgggcc ggccgccgct
      961 tctacatgcg ccaggacctc cacatgcgcg accagtggta ctggaacaac agcggcgacg
     1021 gcgtgggcat cgagaacatc gacctcggcc ccgtcaagat gcactacgcc tacatccagc
     1081 acgacaccgg caacgtgaac agcgactgga acaacggcgc catccgcggc gtgctggccc
     1141 cctacagcca gtgggtcggc ggcgccggcc acaccatcat cggctcccac gacctgcgct
     1201 tctcggacat caagctctgg gaaggcggct cgctgaccct gggcgtgcag ttcaacgacg
     1261 cccaccccaa gtccggcacc gagaatgacg gcaacaagaa tgacggcacc cagttcaacg
     1321 tcatcctgaa ccaggccggc gtgctgggcg gcgacaaccg ggtctacgcc acctacggca
     1381 acggctccac gtactggaac tggtacaacc ccgacgtgaa gaccgagaac aagtggtggc
     1441 acgtgatgga cgccttctac atcaagccca tggccaacct tgagatgcag ggcgtcgtcc
     1501 agtaccgcaa gcagaacggc gaaggcacca tgaaggacag caccaacgcc tggacctcca
     1561 tcggcgtgcg ccccgtgtac ttcttcacca agcacttcag cgtggcctac gaagtgggcc
     1621 tcgataagct gaagttcgac aacgagaccg aagcccgcaa gctgatgaag aacaccatcg
     1681 cgctgcagtg gagcccccag gcctccttct ggagccgccc ggtgatccgc ctcttcgcca
     1741 cccgcgcgga ctggaacaag aacgccaaca actggaacaa gattggcgaa ggccagttcg
     1801 gcaatgcgat gcagggcatg accttcggtg cccagatcga ggcctggtgg taggtccttt
     1861 cccgaacgaa cggcccgtcc aggtggacgg gccgttcctc ggctgaacct gacaccaagg
     1921 aaccgacatg accttccgtc ccgtaccgac cgccctcctc ctcgccggcc tcctgaccgg
     1981 tgggcttggc tgtcacgggc ccagcacgga aacctccagc cgctacccgg tggacacgac
     2041 gaccatcgcc ccgggccagc agctggaggg cgcgccgggc tggtacaacg acgcggtgat
     2101 ctaccacatc tgggtgaagg ccttcgcgga tggcgtctac ggcgacggca tcggcgacct
     2161 gccgggcatc caggccaggc tggaccacct gcagtccctg ggcgtgaaca ccctctggct
     2221 gtcgccgatc ttcgagtgcg actacaaggg cgccaacatg cacgggtacg acacgacgga
     2281 ctactacgcc gtgaacgacc ggttcggcac cagggccgac ctcaaggccc tcatcgacgc
     2341 ggtgcatgcc cggggcatgc gcatcctctt cgacttcgtg cccaaccaca cctccacgaa
     2401 gcacccctgg ttcaccgacg cggtcacccg cgacagctgg tacctctgga agtccaccca
     2461 ggaggcgagc tggggcttcc cctggggcgg cggcacgacg caggacgtct ggaagcagag
     2521 cggggaccgg tacttctaca cctcgttcgg cgtgacctcc ctcgccgacc tgaacttcta
     2581 caaccccgcc gtgcagtccg agatgcgcaa ggtccaggcc tactggctgg atcgcggttt
     2641 cgacggcatg cgggtcgacg cggtgcgcta cctctgcgaa tcggggccgg gccaggccgc
     2701 cgaccaggcg gacacccacg cccgcctgca ggccttccgc gcgttgctcg acgagtacga
     2761 cagcggcgac ctgcatcccc atccgggtgg cgacccggcc cggcacagca gcaaggtgat
     2821 gctcgccgag gcctggacca atggcccgat tggcgtggcg ccctactttg gcagcggtgc
     2881 caatgaattc cacctctgcc tggacttcag cgcgccctgg gccatctccg acgcgatcac
     2941 gaagggggac ggcgccaagg tgacggcgct ctgggagctg gagcagcaga ccttccccgc
     3001 ggggcagcgg tcggcgacct tcgactcgaa ccacgacaac ctgatctcgc ggccaggcac
     3061 gcagtacggc ggcgccaagg ccaaggtcat cctggccgag gccctgaccc tgctctcccc
     3121 gggcacgccg atcctctact acggcaacga gatcggcatg accggccagt ccggcaccga
     3181 cctcaacctc cggcagccca tggactgggc agctgtcgca acccagtcgg ggcagcccga
     3241 ttccatcctc agctggtgca agtacctcat ccaggcccgg cgcgcctatc ccgccctgcg
     3301 ggggggctat gccaccctgg ccacggacgt gggaccgggc aaggcgctgg cctacctccg
     3361 cgacgccggc accgagcggg tgctggtggt ggcgaacctt tccgcggcga cccagacagt
     3421 ggtggtgtcg ggcctgacgg cccacggcgt gccaagcggg gggcccgtgc aggccgtcct
     3481 cggcgacctc aagggcgtgg ccgccctgtc aggcgatgcc tacacggcga ccagcattcc
     3541 gccctacggc gtgcgggtgc tctacgtggc cggttccgga ttccagacca ccctccacgg
     3601 cgacctgccc tgaccttgca ccccgacccg cggggcctat ccctctggtt ccaccccttc
     3661 cgccctttcc cggactcccc cccatggcca acctccaatt ccaagccctg cgcaagtcct
     3721 tcggagactc ggagatcctc catgggatcg accttgagat ccaggacggc gagttcatcg
     3781 tcttcgtggg gccctcgggc tgcgggaaat ccacgctgct gcgctgcatc gcgggactgg
     3841 aggagatcac cagcggcgag ctgtccatcg gcggccagaa ggtgaacgac gtgccgccct
     3901 ccaagcgcgg catcgccatg gtgttccaga gctacgccct ctacccccac atgaccgtgg
     3961 ccgagaacat ggccttcggc ctcaagctcg ccggacattc gaagacggag atcgcctcgg
     4021 ccgtaaatcg ggccgcggag atcctccaga tcgaatccct gctcgatcgc cgtccgaaag
     4081 cgctgtcggg gggacagcgc caacgggtgg cgatcggcag ggccattgtc cgcaagcccg
     4141 gcgtgttcct cttcgacgag cccctgtcga acctggacgc ggggctccgg gtgcagatgc
     4201 gcgtggagtt ggcccggctg cacaaggacc tggcgaccac gatggtctac gtcacccacg
     4261 accaggtgga ggccatgacg ctggcccacc gcatcgtggt gctcaaccag ggccgcatcg
     4321 agcaggtggg ctcccccctg gagctctacc accaccccgc caaccgcttc gtggcggggt
     4381 tcatcggctc gccgaagatg aacttcctcc cctgccacct ggtcgccgcg aaggagggcg
     4441 gggccacggt gcgtctcgag gacggcaccc tgctcaccgc cggcgcggac gcgcgcggcc
     4501 tggccgaggg cacgcccctc accctgggca tccgccccga gcgcctgcag gcggagacca
     4561 ccggaggcga gggcacggcc cggaccaccg tgctggtggc cgagcacctg ggcgacacgg
     4621 tgttcctcta cgtgcaggcg cccggcggga cgggccagct caccgtcaag gcccagcccg
     4681 aaaatcccct gcggaccggc gacgagacgc acctccgctt ccccgccaag cactgcctcc
     4741 tcttcgggcc ggacgaccag accctgcccc gccttctcta ggtccttcca accgcttcac
     4801 cgggccccct ggggcctctc accaaaggag tcagacgtga gccatcccat caagttccgc
     4861 aagctggcga ccaccgccgc cctgtgcatc atcgctggcg cctgtacgct ggcaccggcc
     4921 gctgagaagg gcaagctgct catctggatc aacggcgaca aaggctacaa cggcctccag
     4981 aaggtgggcg acgagttcac caagaagacg ggcatcaagg tcgtcgtcga gcatcccgaa
     5041 gacgcccccg gcaagttcca gcaggccgcc gaagagggca agggccccga catctggatg
     5101 tgggcccatg accgggtggg cgaatgggcc gagagcggcg tcatcaacgc cgtgaacccc
     5161 ggcaagaaga tcaaggacga catcgacccc accgcctggc aggccttcac catcaagggc
     5221 aaggtctggg cgtaccccgt ggccatcgaa gccgtgtcgc tgatctacaa caagaacctg
     5281 gtgaagaccc cgcccaagac cttcgaggag atcttcgccc tcgacaagaa gttcgcggcc
     5341 cagggcaaga aggccatcct gtgggactac accaacacct acttcaccat gcccatgctg
     5401 gccgccaacg gcggctacgc cttcaagatg aaggccgacg gcacctatga tccgaaggac
     5461 acgggcgtga acaacgccgg agccctgaag ggcgccgagc tgctcacgaa gatggtgaag
     5521 gagggcgtca tgcccaaggg c
//
LOCUS       DATGWW010000574         2151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_385919, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000574 DATGWW010000000
VERSION     DATGWW010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_385919"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(90..674)
                     /locus_tag="VK150_08365"
     CDS             complement(90..674)
                     /locus_tag="VK150_08365"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HLP31360.1"
                     /translation="MTRFLLSLLLTPILAAQAPSGLKLGDPCPAFRLPGTDGKVHGPE
                     AGAPLLVVFLSTECPYVMATQARINAYAKQYSGSVKVLAINANDVETHAQESMAAMQA
                     QAKGQGFVFPYLKDAPQAVTRAFGAVCTPDFFLFDAAGKLVYRGRMDDSWRDPAKVTV
                     RDLEAATGAVLAGNAVSPDQPASRGCSIKWKPVS"
     gene            complement(744..>2151)
                     /locus_tag="VK150_08370"
     CDS             complement(744..>2151)
                     /locus_tag="VK150_08370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31361.1"
                     /translation="AGGEARVRAIRGLKLEAICHTPLVEQSDRPEGPYVTAYGEITLW
                     RDVMNGREYREERQRRMFFEDWTPFPSVYFTTTESYRSVRGKWGAGDLRSWEEGQEAL
                     ALSPERLLITACDAPDLRADGQETFQGMAQDRLRFTWRQRKVTLLLNPHTHLPTRLEV
                     VRTHPESLFLHLWGDVATQTTFGNWQLVQGVALPLLQVSSTLGWPGRSLTILRATLDP
                     SDAPWPTLEENLRPAAAQVVRSGPSAIAFRPNGQTLAQGVVFHAGPWNTTLVSQGDGV
                     VVLEAPLPSEYSEGVIQEAARAFPDQPLKAVVSTSDAWPHLSGVRAYAARRLPIYGLD
                     LNQSLLNRMLDAPHRLAPDAWERTKAADPRLKAQLISVSAKTVIGTGPNRLELYPIRG
                     QSGERMLMAYFPEHRLLYGSDLVQRNPRGGFLMPIYLVDLARAVAREGLQVDTVFAMH
                     LGPTPWAQVLEAIAQAQK"
BASE COUNT          311 a          704 c          813 g          323 t
ORIGIN      
        1 ggtccagccc gccacgcccg gcgtggcccg ctcccactgg gcgagggcgt cgcagacctc
       61 cggcggcagc ggcagggcga agaagagcct caggagacgg gcttccattt gatggagcag
      121 ccccggctgg cgggctgatc aggcgagacg gcatttcccg ccagcacggc ccccgtggcg
      181 gcctccaggt cgcgcacggt gaccttggcc gggtcgcgcc agctgtcgtc catgcggccg
      241 cggtagacca gcttgccggc ggcgtcgaac aggaagaagt ccggcgtgca caccgcgccg
      301 aaggctcggg tcaccgcctg gggcgcgtcc ttcaggtacg ggaagacgaa gccctggccc
      361 ttggcctggg cctgcatggc ggccatggat tcctgggcgt gggtctccac gtcgttggca
      421 ttgatggcga gcaccttcac gctgcccgag tactgcttgg cgtaggcgtt gatgcgggct
      481 tgggtggcca tgacgtaggg gcattcggtg ctcaggaaca ccaccagcag gggcgcgccg
      541 gcctcggggc cgtgcacctt cccatcggtt cccggcagcc ggaaggcggg gcaggggtcg
      601 cccagcttaa ggccgctggg agcttgggcg gcgaggatgg gcgtgagcag gagcgacagc
      661 aggaaacggg tcattcggga cctccgggcg gcgctgtgtg ctcgggttgg atgcccaggg
      721 ccccgggttt gttccccgcc gtcctacttc tgcgcctggg cgatggcttc gagcacctgg
      781 gcccagggcg tgggccccag gtgcatggcg aagaccgtgt ccacctgcag cccctcccgg
      841 gccacggcgc gggccaggtc caccaggtaa atgggcatca agaagccgcc gcggggattg
      901 cgctgcacca ggtcgctgcc gtagagcagc cggtgctcgg ggaagtaggc catgagcatg
      961 cgctcgcccg attggccgcg gatggggtag agctccagcc ggttgggccc ggttccgatc
     1021 acggtcttgg cgctgaccga aatcagctgc gccttcaggc ggggatccgc cgccttggtc
     1081 cgctcccaag cgtcgggcgc cagccggtgg ggcgcgtcca gcatgcggtt caggagggac
     1141 tggttcagat ccaggccgta gatgggcagg cggcgggccg cgtaggcccg gacgccgctg
     1201 aggtggggcc aggcatccga ggtggaaacc acggccttca ggggctggtc cgggaacgcc
     1261 cgggccgctt cctgaatcac gccttcgctg tactcgctgg gcagcggcgc ctccagcacc
     1321 accaccccat cgccctgcga gaccagcgtg gtgttccagg gccccgcatg gaacaccacg
     1381 ccctgggcga gcgtctggcc gttcggacgg aaggcgatgg cggaagggcc ggaacgcacc
     1441 acctgggccg cggcggggcg caggttttcc tcgagggtgg gccagggcgc gtcggaagga
     1501 tcgagggtcg cgcggaggat ggtcagggag cgcccgggcc agcccagggt ggaactgacc
     1561 tgcagcaggg gcagcgccac gccctgaacc agctgccagt tgccgaaggt cgtctgggtg
     1621 gccacgtcgc cccacaggtg gaggaacagc gactcggggt gcgttcgcac cacttcgagg
     1681 cgggtgggga ggtgcgtgtg cgggttgagc aggagcgtga ccttccgctg gcgccaggtg
     1741 aagcggaggc gatcctgggc catgccctgg aatgtctcct gcccgtcggc cctcaggtcc
     1801 ggggcgtcgc aggcggtgat gagcaggcgc tccggcgaga gggccagggc ctcctggccc
     1861 tcctcccagg accgcagatc tcccgcgccc cacttgcccc gcacggaacg atagctctcg
     1921 gtggttgtga agtagacgct cgggaacggc gtccagtctt cgaagaacat ccggcgctgg
     1981 cgttcctcgc ggtactcgcg accattcatc acgtcccgcc acagggtgat ctcgccgtag
     2041 gcggtgacgt aggggccttc gggtcggtcg gactgctcca ccaggggcgt gtggcagatg
     2101 gcctccagct tgaggccacg gatggcccgc acccgggcct cgccgcccgc g
//
LOCUS       DATGWW010000575         1794 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_45033, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000575 DATGWW010000000
VERSION     DATGWW010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1794
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45033"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VK150_08375"
     CDS             complement(<1..443)
                     /locus_tag="VK150_08375"
                     /inference="COORDINATES: protein motif:HMM:NF013232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HLP31362.1"
                     /translation="MPASDALSILRAKGPFVPELAIVLGSGLGALADSPEAKAGTTIP
                     FTDLPGFPAPTVAGHGGKLVFCAFEGRKVVLQAGRFHYYEGHPMSLVTSPMRLYGRLG
                     VKAVMLTNAAGALNPGFGVGELMALTDHINLFGTNPLIGPNVEPGA"
     gene            complement(466..>1794)
                     /locus_tag="VK150_08380"
     CDS             complement(466..>1794)
                     /locus_tag="VK150_08380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31363.1"
                     /translation="AFRLNNLEAPLLGQAVLETSLPGRTAGLGSGSRVIGIGDTIATF
                     VAAYEYAHPGTTLDLHYWPGRTESRGTFIDYDHAPYPQSFDSSTGRFHYFGSISAGPV
                     NDDAWDEGVILPMLARNYLFAGQDGRTFSTPLNPLLPTSAALTDLSPDMARIEGLADG
                     MAANLLKSPYLADTQGTGLAVPVKDIRDVSALTAAQLGPFSAPAIRALAWDVILKANS
                     IPNPGLASDWANINVLAAARFFRAPAPTNGATDATARDIEPLNIFAQLKLLQEAKATG
                     EPVDLAPLFTDALLTPMTSPYGITWPRPTSGPLAAFVLDWGTDPNTSTTPLAPVTLSM
                     AKAVQVNGVYPNLSQGEVAYAGFSLSADKRYVVTTTIVPALSAGAALDLDLPYMNRSF
                     TFSGAGGTTGSITIPVNNTAPFYHPVRLRLKSPSSVQPDVAVTVAFTPAP"
BASE COUNT          295 a          488 c          717 g          294 t
ORIGIN      
        1 gcgccgggtt caacgttggg cccgatgagg gggttggtgc cgaagaggtt gatgtggtcg
       61 gtcaaggcca tgagctcgcc cacgccgaag ccgggattca gcgcgccggc ggcgttggtg
      121 agcatgacgg ccttcacgcc caggcggccg tagaggcgca tgggggaggt gacgagggac
      181 atgggatggc cctcgtagta gtggaagcgc cccgcctgga ggaccacctt ccgcccctcg
      241 aacgcgcaga agaccagctt gccgccatgg cccgccaccg tgggcgccgg gaagcccggg
      301 agatccgtga acggaatggt cgtgcccgct ttggcctccg ggctgtcggc cagggccccc
      361 agccccgaac ccaggacgat ggccagctcc gggacgaacg ggcccttggc cctcagaatg
      421 gaaagggcgt cggatgcggg catggaagtc tccgggtgcc gaggatcagg gcgcaggcgt
      481 gaaggccaca gtcaccgcca cgtccggctg gacagaggag gggctcttca ggcgcaggcg
      541 cacggggtgg tagaacggag cggtgttgtt cactggaatg gtgatgcttc ccgtggtacc
      601 gccagcgccg gagaaggtga aggaccggtt catgtacggg aggtccaggt ccaacgcggc
      661 tcctgcggac agggcgggga cgatggtagt ggtgaccacg taccgcttgt cggcactcaa
      721 gctgaacccg gcgtaggcca cttcgccctg agacaggttc gggtagacgc cattcacctg
      781 cacggccttg gccatgctga gggtgaccgg ggccagtggg gtggtggagg tgttgggatc
      841 agtgccccag tccagcacga aagctgcgag tgggccgctg gtgggcctcg gccaggtgat
      901 gccgtagggg ctggtcatgg gcgtgagcag ggcatcggtg aacaggggtg ccaggtccac
      961 tggctcaccg gtggccttgg cttcctgcag cagtttgagc tgggcgaaga tgttcaacgg
     1021 ctcgatgtcc cgggcggtgg cgtcggtcgc gccgttggtg ggcgcgggag cgcggaagaa
     1081 tcgggcggcg gccagcacgt tgatgttggc ccaatccgag gcgaggccag ggttggggat
     1141 gctgttggcc ttgaggatca catcccaagc caaggcacgg atggccgggg cggagaaggg
     1201 gccgagctgg gcggcggtga gagcggatac atcccggatg tccttcacgg ggacggccag
     1261 gcccgtgccc tgggtatcgg ccaggtaggg ggacttgagc aggttggcgg ccatgccgtc
     1321 ggcgagtcct tcgatgcgtg ccatgtctgg ggagagatcg gtcagcgcgg cggaggtggg
     1381 gaggagtgga ttgagtggcg tcgagaaggt ccgcccgtcc tgacccgcga agaggtagtt
     1441 tcgggcgagc atggggagaa tcaccccctc gtcccaggcg tcgtcgttga ccgggccggc
     1501 gctgatggag ccgaaatagt ggaatcgtcc agtggagctg tcgaaggatt gcggataagg
     1561 cgcatggtcg tagtcgatga aggtgcctcg gctttccgtg cggcccggcc agtagtggag
     1621 gtccaaggtg gttccgggat gggcgtattc ataggcggcc acgaaggtgg cgatggtgtc
     1681 gccgatgccg attacccggc tgcctgagcc gaggccggcg gtacggcccg ggaggctggt
     1741 ttcgagcacg gcctggccga ggaggggcgc ttccaggttg ttgagcctga aggc
//
LOCUS       DATGWW010000576         2782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_385950, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000576 DATGWW010000000
VERSION     DATGWW010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2782
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_385950"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..221)
                     /locus_tag="VK150_08385"
     CDS             complement(<1..221)
                     /locus_tag="VK150_08385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31364.1"
                     /translation="MIAQGLPSVDALTQARAAEVTPEASDKTEKAARQFEGLLMGLLF
                     QTMRKTVEPSGLLGDSGQSRATYEYLMDQA"
     gene            complement(218..1342)
                     /locus_tag="VK150_08390"
     CDS             complement(218..1342)
                     /locus_tag="VK150_08390"
                     /inference="COORDINATES: protein motif:HMM:NF014206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HLP31365.1"
                     /translation="MRFTALFLAALLLPFTSLMGADAAKPEKKIEVRLKEVARLQGVR
                     SNQLLGYGVVVGLDGSGDKDQTKFTVQSLMNLMARQGLTVNPATVKVKNVAAVMVTAE
                     LPPFARAGSRIDVTVSSTGDAKSLAGGVLLMTALQGPDSQVYAVAQGPLLVGGFSAAA
                     GGASVTKNHPTVGRVPEGALIEREVGGSFNARATLRYSLMEEDFTTAVRVVHAINEEL
                     GEQLAQPLDSRTVELQIPKAFQGRAVELVARLENLSVQLQTKARVVVNERTGTVILGS
                     DVRIGAVSIVQGGLSIVVSSTPLVSQPAPFSQGKTVTATKKDVTAQEEKPKTVSVEPG
                     VSVGKLAEMLNGMGVTPRDLVAILQAIKEAGALQAELRVL"
     gene            complement(1352..2014)
                     /locus_tag="VK150_08395"
     CDS             complement(1352..2014)
                     /locus_tag="VK150_08395"
                     /inference="COORDINATES: protein motif:HMM:NF014195.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009427 - bacterial-type flagellum basal
                     body, distal rod, L ring [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HLP31366.1"
                     /translation="MLPITLVFLGVGCSIPRRHDPNLVKKPAIPLVEEAPAAQPLNEG
                     SLWRDRPLVADLRAYRVNDLVTLKISESTNAISKADVTTNRAGSNKLSSPNLFGALAG
                     FGIGSSTADKATSNTNKFAGTGTTGRSATFTTTITARVVKVIGNGNLIVEGFRDIQLN
                     NETQRLYVAGMIDPNRLDGTNSITSGQVAELRIGYGGEGVVDETLKPGYISRLLNYIW
                     PF"
     gene            complement(2068..>2782)
                     /gene="prmC"
                     /locus_tag="VK150_08400"
     CDS             complement(2068..>2782)
                     /gene="prmC"
                     /locus_tag="VK150_08400"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HLP31367.1"
                     /translation="SRTWMVAHGTEQVPAEVRRRISGWVRRRKKGEPWAYILGSCLFR
                     DRRFRVNPDTLIPRPETELLVEAALDVGHRLKVDRCVDVGTGSGIIAVSLALETNWRM
                     SASDVSSGALATARENASTLGATVQFHEGHLLDPVPDPLGLVVANLPYVDPADQPTLQ
                     RELAFEPASALFAPDRGLALSDALLHQARTRQAPACLLEIGAGQGGELCRRAMGMGWH
                     KAMVHQDFAGHDRILIALM"
BASE COUNT          417 a          928 c          955 g          482 t
ORIGIN      
        1 gcctggtcca tcaggtattc atacgtggcc cgggactgac ccgaatcccc aagcagacct
       61 gagggttcca cggtcttgcg catggtctgg aagagcaggc ccatcaggag gccttcgaac
      121 tgtcgggcgg ccttctccgt cttatccgag gcctccggcg tgacctcggc cgcccgggcc
      181 tgggtcaggg cgtcgacgga gggaagcccc tgggcgatca caggaccctc agctccgcct
      241 gcagggcgcc ggcttccttg atggcctgca ggatcgccac caggtcgcgg ggggtgacgc
      301 ccatgccgtt cagcatttcc gccagcttgc ccacgctgac gccgggttcc acgctgacgg
      361 tcttgggctt ttcctcctgg gccgtcacgt ccttcttggt ggccgtgacc gtcttgccct
      421 ggctgaaggg cgccggctgg ctcaccagcg gcgtggagct gaccacgatg ctcagcccgc
      481 cctgcacgat gctcacggcg ccgatgcgga cgtcggagcc caggatcacc gtgcccgtgc
      541 gctcgttcac caccacccgg gccttggtct gcagctgcac gctcaggttc tccaggcggg
      601 cgaccagctc cacggcacgg ccctggaagg ccttgggaat ctgcagttcc acagtgcggg
      661 aatccagggg ctgggccagc tgctcgccca gttcctcatt gatggcgtgc accacgcgca
      721 cggccgtggt gaagtcctcc tccatcaggc tgtagcgcag ggtggcccgg gcgttgaagc
      781 ttccgccgac ctcgcgctcg atgagggcgc cctcgggcac gcggcccacg gtcgggtggt
      841 tcttcgtgac ggaggcccca ccggcggcgg cgctgaagcc acccaccagc agcggcccct
      901 gggccacggc gtagacctgg ctgtccggcc cctggagggc ggtcatcagc aggacgccac
      961 cggccaggga cttggcgtcg cccgtgctgg agaccgtcac gtcgatgcgc gaaccggcgc
     1021 gcgcgaaggg cggcagttcc gccgtcacca tcaccgcggc cacgttcttc accttcacgg
     1081 tggcggggtt gacggtcaga ccctgccggg ccatgaggtt catgagggac tggaccgtga
     1141 acttggtctg gtccttgtcg ccgctgccgt ccaggcccac gaccacgccg tagcccagca
     1201 gctggttgga acgcaccccc tggaggcgcg ccacttcctt caggcggact tcgatcttct
     1261 tctcgggttt cgccgcgtcc gcccccatca gggaggtgaa cgggaggagc agggccgcca
     1321 ggaagagagc cgtgaagcgc atggatgcct cctagaaggg ccagatgtag ttgaggaggc
     1381 ggctgatgta gccgggcttc agggtctcgt ccaccacgcc ctcgccgccg tagccgatgc
     1441 gcagctcggc cacctggccc gaggtgatgg agttggtgcc atccagccgg ttggggtcga
     1501 tcatgccggc cacatagaga cgctgggtct cgttgttcag ctggatgtcg cggaagcctt
     1561 ccacgatgag gttgccgttg ccgatcacct tcacgacccg ggccgtgatg gtggtggtga
     1621 aggtggcgct gcggcccgtg gtgccggtgc cggcgaactt gttggtgttg gaggtggcct
     1681 tgtcggcggt gctgctgccg atgccgaagc cagccaaggc tccgaagaga ttggggctgc
     1741 tcagcttgtt gctgccggcc cggttggtgg tcacatccgc cttgctgatg gcgttggtgc
     1801 tctcgctgat cttcagggtg acaaggtcat tcacccggta ggcgcggagg tccgccacca
     1861 ggggacggtc ccgccagagg ctgccttcat tgaggggctg cgccgctggg gcctcctcca
     1921 cgagggggat ggccggcttc ttcaccaggt tcgggtcatg gcgccgggga atggagcagc
     1981 cgactcccag gaacaccagg gtaatgggca gcattttcct cattggacac ctccgctcct
     2041 gaacagggcg aggatggtgc caagcgctta catgagggcg atcagaatcc ggtcgtgtcc
     2101 cgcaaaatcc tgatgaacca tagccttatg ccaacccatg cccatggctc ggcggcataa
     2161 ctcgcccccc tggcccgccc cgatctccag caggcaggcc ggtgcctgcc gggtgcgggc
     2221 ctggtggagc agcgcgtcgg acagggccag gccccggtct ggcgcgaaca gggccgaagc
     2281 cggctcgaag gctagctccc gctgaagggt gggctggtcg gcgggatcca cgtagggcag
     2341 gttcgccacc accagtccca acgggtcggg caccgggtcc agcaggtgcc cttcatggaa
     2401 ttggacagtc gcgcccagag tgctggcgtt ctcgcgggcc gtggccaggg cgccggaact
     2461 cacatctgaa gcggacatgc gccaatttgt ctccagggct aggctcacgg cgatgatccc
     2521 gctgccggtg cccacgtcca cgcagcggtc gaccttcagc cggtgcccca cgtccagggc
     2581 agcctccacc agcagctcgg tttcaggccg ggggatgagg gtgtcggggt tgacccggaa
     2641 gcggcgatcc cggaacaggc aggagcccag gatgtaggcc cagggctcgc ccttcttccg
     2701 acggcgcacc cagccgctga tgcgacgccg cacctcggcg ggcacctgct cagtaccatg
     2761 ggccaccatc caggtcctgg at
//
LOCUS       DATGWW010000577         1843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_359996, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000577 DATGWW010000000
VERSION     DATGWW010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_359996"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1247)
                     /locus_tag="VK150_08405"
     CDS             complement(<1..1247)
                     /locus_tag="VK150_08405"
                     /inference="COORDINATES: protein motif:HMM:NF024592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HLP31368.1"
                     /translation="MLDLSTLKEAGMAVALGLMMGLERERSGFERSLQGREEVHQRRE
                     SDRMEGQQGSLGARTFALLTLLGWISVKVGGEGLALPIAVMAFAALLIGLFYFETSST
                     QRGLTTEIAALAAPLLGMLLTRDALLAVALAVIVTLLLLSKPWIRAWIPKLHREDLTS
                     TMQLLLVFAILLPLLPERTLDPWQVLSPRKVGWMVALIAAVDFLGYALNRILGHRRGA
                     LMTGLVGGLVSSTMVTVTMSRQARQDPSHQGPAQVAVLLACAMMACRVAFLAGVVGGP
                     TVAQPLLLPMAAMVLVLLAGSAWIYQSGAMGLGEAELAVRNPFHLKRAAAWGLALALV
                     LLASAAARAWFGDQGLLWTAGLSGLADVHAITLAVSSQVNSVRLPAATAVLAMIIAIG
                     ANTLAKAAFAWFSGGRAFGRRLTG"
     gene            complement(1266..1739)
                     /locus_tag="VK150_08410"
     CDS             complement(1266..1739)
                     /locus_tag="VK150_08410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31369.1"
                     /translation="MLVGMITVEPWVPPTTPDLATLAMAAADEAGIASLRAWPEVRKG
                     GIGFATLPPFLCWRGMQGGTRHLVLLQAREVGALVPGARTERLPEGWLDSLDLAALAR
                     PLARHPAFPGGASIHVVHLPGGESFRVRTFGTAAPELVAEVLKRTSHIQIWNLAD"
BASE COUNT          305 a          657 c          659 g          222 t
ORIGIN      
        1 ccggtcaggc ggcggccgaa ggcgcggccg ccggagaacc atgcgaacgc cgccttggcg
       61 agggtgttcg cgccgatggc gatgatcatc gccaggaccg cggtcgcggc gggcagtctg
      121 acgctgttca cttggctgct caccgccagg gtgatggcgt gcacgtccgc gaggccagac
      181 agccccgccg tccacaggag gccctggtcg ccgaaccagg cccgggccgc cgccgaagcc
      241 agcagcacca gggccagggc cagcccccag gccgccgccc gcttcaggtg gaagggattg
      301 cgcacggcca gttccgcctc gcccaggccc atggcgcccg attgataaat ccaggcgctg
      361 ccggccagga gcaccagcac catggcggcc atggggagca gcagcggctg ggccacggtc
      421 ggtccgccca ccacgccggc caggaaggcc acgcggcagg ccatcatcgc gcaggccagc
      481 agcaccgcca cctgcgcggg tccctggtgc gagggatcct gccgggcctg ccgcgacatg
      541 gtgacggtca ccatcgtgga gctgacgagc ccgcccacca gcccggtcat gagggccccc
      601 cggcggtgcc ccaggatccg gttcaaggcg tagccgagga aatccaccgc tgcgatgagg
      661 gccaccatcc agcccacctt gcggggcgag agcacctgcc agggatccag ggtccgctcg
      721 ggcagcagcg ggaggaggat ggcgaagacc aggagcagct gcatggtcga cgtgaggtcc
      781 tcccggtgca gcttggggat ccacgcgcgg atccagggct tcgacagcag cagcagggtg
      841 acgatcaccg ccagcgccac ggccaggagg gcgtcccgcg tgagcagcat gcccagcaga
      901 ggcgcggcca gggcggcgat ctcggtggtg aggccgcgct gggtggagct ggtctcgaag
      961 tagaacaggc cgatcagcag ggcggcgaag gccatgacgg cgatggggag ggccagaccc
     1021 tcgccgccga ccttgaccga gatccaaccg agcagcgtca acaaggcgaa ggtgcgggcg
     1081 cccaggctgc cctgctggcc ctccatacga tccgactcgc gccgctggtg gacttcctcc
     1141 cgcccctgca ggctgcgctc gaagccgctg cgctcccgtt cgaggcccat catcaggccc
     1201 agcgccacgg ccatgccggc ttccttcagg gtggacaggt ccagcatggt cagcctccgc
     1261 aatgcctaat cggccagatt ccagatctgg atgtgactgg tgcgtttcag cacttccgcc
     1321 accagctccg gggcggccgt gccgaaggtg cggacccgga aggattcccc accgggcagg
     1381 tgcaccacat ggatggaggc gccgccggga aaggccgggt gccgggccag gggccgggcc
     1441 agggccgcca ggtcgagcga atcgagccag ccctccggca gacgctcagt ccgcgcgccg
     1501 ggcacgaggg cgcccacctc gcgggcctgc agcagcacca ggtgccgggt ccccccctgc
     1561 atgcctcgcc agcagaggaa gggggggagc gttgcgaacc cgatgccccc cttgcgcacc
     1621 tcgggccatg cacgcaggga ggcgatgccc gcttcatccg cggccgccat ggcgagggtg
     1681 gcgaggtccg gcgtggtcgg gggaacccag ggttcgacgg tgatcatccc gacgagcatc
     1741 gcatatcggg taggctgggg cccatgtgta cgacgcaccc atgcgggccc ctggcctcca
     1801 gccaagccat ccggagccga ccatgagccc ccgccccgtc att
//
LOCUS       DATGWW010000578         2768 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_271127, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000578 DATGWW010000000
VERSION     DATGWW010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2768
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271127"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..876
                     /locus_tag="VK150_08415"
     CDS             <1..876
                     /locus_tag="VK150_08415"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP31370.1"
                     /translation="LLKPRLPEKVTLFVDLEPSLPPIEADAAQIQQLILNLVTNASEA
                     LGEEEGSIRLSTRAIRLVPDGLVKDADGQPLGPGEFVVLEVIDTGCGMSPDVQARIFD
                     PFFTTKATGRGLGLSAILGILRGHHAGLKVESEPGRGTSFKVYFRATAQPLVVQERKA
                     RPAQTQLHGTVLLVEDEEIVALSVSEMLESMGLKVILARDGRQAVNLFRKQDVHLDLV
                     LMDITMPHMDGLEALRQMHQIDPATPVILSSGYTRHESIHDGKGEEAVGFLQKPYSIH
                     DLYEAVSAHLGTRVT"
     gene            916..1725
                     /locus_tag="VK150_08420"
     CDS             916..1725
                     /locus_tag="VK150_08420"
                     /inference="COORDINATES: protein motif:HMM:NF014658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MqnA/MqnD/SBP family protein"
                     /protein_id="HLP31371.1"
                     /translation="MKFTIAHSPDSDDAYMMAPLALGWLDPEGFDITFIRKDIETLNA
                     EATESRYDVTAISFGAYPELKDRYDLLTAGSSIQEGTGPLVVSRAPLEPAALKSLTIA
                     IPGRRTSAYLSMRKWCAEHGFEPTVELLPFDQILPAVAEGRFEAGLLIHESQLMYHDL
                     GLRLVVDLGAWWKHAYDLPLPMGGNAIRKDLPPDVKQTFAVLMRKSVELARARHWESV
                     DYSQSFGRGMDRDMIGRYVNAWVNDFTVDPGPRGRQAVQKLLGLEPVWIQG"
     gene            1782..2216
                     /locus_tag="VK150_08425"
     CDS             1782..2216
                     /locus_tag="VK150_08425"
                     /inference="COORDINATES: protein motif:HMM:NF020551.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtaL-like protein"
                     /protein_id="HLP31372.1"
                     /translation="MPRHQVSSPVDASPETVWAVLLDKMEHPQRYIADALDADILVRH
                     PDSVIRQLVLPGGVAYRERITADPSARTITFTLLDHPVFEGTVLNRLQVDGAGGVELT
                     FELDWTPRPGTRDERDPEEPLTLILSSIQQTRRIAEALEVRS"
     gene            complement(2224..>2768)
                     /locus_tag="VK150_08430"
     CDS             complement(2224..>2768)
                     /locus_tag="VK150_08430"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HLP31373.1"
                     /translation="IQSATRRRITGVIQTDAAINPGNSGGPLLDSAGRLIGVNTAIQS
                     PSGASAGIGFAVPVDTVNRVVPQLIARGRLDRPDLGFEPVEPRLVERAFGPQKGVMVG
                     KVFRGGAAARAGLQGVGVEGRRVFAGDLIQGVNGRAVTDWDTLLDVVEAQPLGSTVDL
                     DIQRDGRRVKVPIKLEAGRE"
BASE COUNT          444 a          996 c          914 g          414 t
ORIGIN      
        1 ctcttgaagc cccgcctccc ggagaaggtc accctcttcg tcgacctcga gccctccctc
       61 ccgcccatcg aggcagacgc cgctcagatc cagcagctca tcctgaacct ggtgaccaac
      121 gcatccgagg ccctgggtga ggaggaagga tccatccggc tgtcgacccg ggccatccgg
      181 ctggttcctg acggcctggt gaaggatgca gatggccagc cgctcgggcc gggcgagttc
      241 gtcgttctcg aggtcatcga cacgggctgc gggatgagcc cggatgtgca ggccaggatc
      301 ttcgacccct tcttcaccac caaggccacg ggccggggcc ttgggctatc ggccatcctg
      361 ggcatcctcc gcgggcatca cgccggcctc aaggtcgaga gcgaacccgg gcggggcacg
      421 agcttcaagg tctatttccg ggccaccgcc cagcccctgg tggtgcagga gcgcaaggcc
      481 cgccccgccc agacccagct gcacggcacg gtgctcctgg tcgaggatga agagatcgtc
      541 gcgctgtccg tctccgaaat gctggagagc atgggactga aggtcatcct cgcccgggat
      601 ggccgccagg ccgtgaacct gttccggaag caggacgtcc acctcgacct ggtcctcatg
      661 gacatcacca tgccccacat ggacggcctc gaggccctgc ggcagatgca ccagatcgat
      721 cccgcgaccc ccgtgatcct cagcagcggc tacacccggc atgaatccat ccacgacggc
      781 aagggcgagg aggccgtggg cttcctccag aagccctact cgatccacga cctctacgaa
      841 gcggtcagcg cccacctggg gacccgggtg acctagaacc gtccgatttg tgctgaactg
      901 gaggggaggt ccgccatgaa gttcaccatc gcccacagcc ccgattccga tgacgcctac
      961 atgatggcgc ccctggccct ggggtggctg gatcccgagg gcttcgacat caccttcatc
     1021 cgcaaggaca tcgagaccct gaacgccgag gcgaccgagt cccgctacga cgtcaccgcc
     1081 atcagcttcg gcgcctatcc cgagctgaag gaccgctacg acctgctcac ggccggcagc
     1141 agcatccagg agggcacggg ccccctggtg gtgagccggg cgcccctgga accggcggcc
     1201 ctcaagtccc ttaccatcgc catcccggga cggcgcacca gcgcctacct ctccatgcgc
     1261 aagtggtgtg ccgagcacgg cttcgaaccc accgtcgaac tgctgccttt cgaccagatc
     1321 ctgcccgccg tggccgaggg ccgcttcgag gcgggcctgc tcatccatga aagccagctc
     1381 atgtatcacg acctgggcct gcgcctggtg gtggacctgg gcgcctggtg gaagcacgcc
     1441 tacgatctgc ccctgcccat gggcggcaat gcgatccgca aggacctgcc accggacgtg
     1501 aagcagactt tcgccgtcct catgcggaag agcgtggagc tggcccgggc gcggcactgg
     1561 gagagcgtgg actacagcca gtccttcggc cgcggcatgg accgcgacat gatcggccgc
     1621 tacgtgaacg cctgggtgaa cgacttcacc gtggacccgg ggccccgggg ccgccaggcg
     1681 gtgcagaagc tgctgggcct tgagcccgtg tggatccagg gctaggaatc cgtggcgggc
     1741 caggctccgc ggacgtaggc ttgggtcccc aagggattcc catgccccgg caccaggtca
     1801 gcagccccgt ggacgcctcg ccggaaacgg tgtgggcggt gctgctggac aagatggaac
     1861 atccccagcg ctacatcgcc gacgccctcg acgcggacat cctggtccga catccggaca
     1921 gcgtcatccg ccagctggtc cttcccggcg gggtggccta ccgcgagcgg atcaccgccg
     1981 acccctcggc ccgcaccatc acgttcacgc tgctggacca cccggtgttt gaaggcaccg
     2041 tgctcaaccg gctgcaggtg gatggcgcgg gcggcgtgga actgaccttc gagctcgact
     2101 ggacgccccg cccgggaacc cgggacgagc gagatccgga ggaacccctg accctgatcc
     2161 tcagctccat ccagcagacc cggcgcatcg ccgaggcgct ggaggtgcgt tcctaggcgg
     2221 ccctcactcc cggcccgcct cgagcttgat gggcaccttc acccgccggc cgtcccgctg
     2281 gatgtcgagg tccacggtgc tgcccagggg ctgggcctcc accacgtcga gcagggtgtc
     2341 ccagtccgtc acggcccggc cgttcacgcc ctggatgagg tcgccggcga agacgcgccg
     2401 gccctcgacg cccacgccct ggaggcccgc gcgcgccgcg gcgccgcccc ggaacacctt
     2461 gcccaccatg acgcccttct gggggccgaa ggcgcgctcg accaggcggg gctccacagg
     2521 ttcgaagccc aggtcggggc ggtcgaggcg gccccgggcg atgagctggg gcaccacgcg
     2581 gttcacggtg tcgacgggca cggcgaagcc gatgcccgcg ctggcgccgc tggggctctg
     2641 gatggctgtg ttcacgccga tgaggcggcc agcgctgtcg agcagcgggc cgccgctgtt
     2701 gcccgggttg atggcggcat cggtctggat gacgcccgtg atgcgccggc gggtcgcgct
     2761 ctggatct
//
LOCUS       DATGWW010000579         2511 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_202013, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000579 DATGWW010000000
VERSION     DATGWW010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202013"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..973
                     /locus_tag="VK150_08435"
     CDS             116..973
                     /locus_tag="VK150_08435"
                     /inference="COORDINATES: protein motif:HMM:NF012372.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HLP31374.1"
                     /translation="MRALELFSGLGGWRFALGNRGSVAAAFDVSEAANATYALNHGEI
                     PKARELATLPLGDLASHGADTWLLSPPCQPFCRMGNHQGLEDRRSRAFRHLMDLFHQA
                     PPEQLVLENVSGFLGSDAHALLLARLRGHGLHHLDLEACPSRFGLPNQRPRVFVVASR
                     RPLKRLPLPDLPTPPLAAFLDPVEDEALYLDFEALARHRPGLDLVEAEDRRSACFIGG
                     YGRRYVGSGSFLKTARGVRRFSPAEVARLLGLPDSFRFPEGIALEARYRLLGNGLSIP
                     VAGWALDHL"
     gene            983..1564
                     /locus_tag="VK150_08440"
     CDS             983..1564
                     /locus_tag="VK150_08440"
                     /inference="COORDINATES: protein motif:HMM:NF013232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31375.1"
                     /translation="MRLLLSAFVPELGPLAEHPPAGWETATVGVGAVTAAAATARLLA
                     ERRPEAVLFLGTCGRYDDRLQLFEAIWASEAIATSLAEVRGEAYRPALERSRWASTLA
                     GALPCHAVAVPPAITKTREGAALLAQVAPVEHLELTGVFAACHAAGVPCGGALVVVNE
                     VGPDAQAQWKANHAEGSRRLVERLRAAGLFEGA"
     gene            complement(1533..>2511)
                     /locus_tag="VK150_08445"
     CDS             complement(1533..>2511)
                     /locus_tag="VK150_08445"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLP31376.1"
                     /translation="LTGIAPLATGLLWPWLLLALGWLALAHAHSRMRPTRALTAGLVA
                     LSFGLLALRGTGRAAASLTVEAVDIGQGDALLLRVPGGEATLVDTGPSPWSGRRLARV
                     LSRRGVREPVHLVITHPHGDHAGGWATLARLWPLASTTVPVLASAADPWDAYRPPDLV
                     PSALRRGDGWTRGPASFSVRWPPRPFTLPDANMVSLVLRVSWVDRELWLMGDALAIQE
                     RDLLDLGDPGPFRHRLLKAGHHGSRTASDPAWIAALRPEVALLPAGLRNRFEHPHPET
                     LEVLRRAGVTGWTTGPRSGVQVVAVPGGWWCAFGDGTSVFTPLRTGPPP"
BASE COUNT          316 a          940 c          931 g          324 t
ORIGIN      
        1 cggcgacggc cctggtcctg gccctgcgcc tgttcatgga gggccagacg ctggcccggg
       61 gcaccaccct tcccgtggcc tgcggaggct gcggcagcgg ttgcggctgc gggtgatgcg
      121 cgccctggag ctgttctccg gcctgggggg ctggcggttc gccctcggga accggggaag
      181 cgtcgccgcc gccttcgacg tgagcgaggc cgccaacgcg acctacgccc tgaaccacgg
      241 cgagatccca aaggcccggg aactggccac cttgcccctt ggcgacctgg cttcccacgg
      301 cgccgacacc tggctgctga gtcccccctg tcagcccttc tgccgcatgg ggaaccacca
      361 gggtctggag gatcgccgct cccgggcctt ccgccacctg atggacctgt tccaccaggc
      421 gccgccggag cagctggtgc tcgagaacgt gagcggcttc ctgggatcgg acgcccacgc
      481 cctgctgctg gcgcgcctgc gcggccacgg cctgcaccac ctggacctgg aggcctgtcc
      541 cagccgcttc ggcctgccca accagcggcc cagggtgttc gtggtggcct cgcggcgccc
      601 cttgaagcgc ctgccgctcc cggatctgcc gacgccgccc ctggccgcct tcctggatcc
      661 cgtcgaggac gaggccttgt acctggattt tgaagccctc gcccggcacc gccccgggct
      721 cgacctggtg gaagcggaag accgccgcag cgcctgcttc atcggaggct acggccggcg
      781 ctacgtggga agcggctcct tcctgaagac cgcccggggg gtgcgccggt tctcgcccgc
      841 cgaagtggcc cggctcctcg gcctgccgga ctcgtttcgc ttccccgagg gaatcgcgct
      901 ggaggcccgg taccggctgc tggggaatgg cctctccatc ccggtggcgg gctgggcgct
      961 ggaccacctg tagaatcacg ccatgcgact cctgctctcc gccttcgtcc ccgagctggg
     1021 ccccctggcg gagcatccgc ctgctggatg ggagacggcc accgtggggg tcggcgcggt
     1081 gaccgccgcc gccgccacgg cccgcctgct ggcggagcgg cggccggaag cggtgctctt
     1141 cctgggcacc tgcggccgct acgacgaccg gctccagctg ttcgaagcca tctgggcctc
     1201 tgaggccatc gcgacgtcgc tggcggaggt gcgcggcgag gcctaccggc cggccctcga
     1261 gcggtcccgc tgggcctcga ccctggccgg ggcgctgccg tgccacgccg tggccgttcc
     1321 ccctgcgatc acgaagaccc gggaaggtgc ggccctgctg gcgcaggtgg caccggtgga
     1381 gcacctcgaa ttgacgggcg ttttcgccgc ctgccatgcg gcgggtgtgc cctgcggcgg
     1441 cgccctggtg gtggtcaacg aggtgggtcc cgacgcccag gcccagtgga aggccaacca
     1501 tgccgaggga agccgccgcc tggtcgagcg gctcagggcg gcgggcctgt tcgaaggggc
     1561 gtgaacacgg aggttccgtc cccgaacgcg caccaccacc cgccggggac cgccaccacc
     1621 tgcacgccgg accggggccc cgtggtccag ccggtcaccc cagcgcgccg gaggacctcg
     1681 agggtctccg ggtgcgggtg ctcgaagcgg ttgcggaggc ccgccgggag gagggccacc
     1741 tccggccgca aggccgcgat ccaggccgga tccgacgccg tgcggctgcc gtggtgcccc
     1801 gccttcagca ggcggtgccg gaaaggcccg ggatccccca ggtcgaggag gtcccgctcc
     1861 tggatggcga gggcgtcgcc catgagccac agctcccggt ccacccagga gacgcgcagc
     1921 accagggaga ccatgttggc gtccggcagg gtgaagggcc tgggtggcca gcgcacgctg
     1981 aaggacgccg ggccccgcgt ccagccgtcc cctcgccgca gggcggacgg caccaggtcc
     2041 ggggggcggt aggcatccca gggatccgcc gccgacgcga ggaccgggac cgtcgtggag
     2101 gccaggggcc agagccgcgc cagcgtggcc cacccgcccg cgtggtcgcc gtggggatgg
     2161 gtgatgacga ggtgcaccgg ctcccgcacc ccgcgccggc tcagcacccg cgccaggcgc
     2221 cggcctgacc agggggatgg ccccgtgtcc accagggtgg cctcgccgcc gggcacgcgg
     2281 agcagcagcg catccccctg gccgatgtcc acggcctcca ccgtcaggct ggctgcggcg
     2341 cggcccgtgc cgcgaagggc cagcaggccg aaggagagcg ccacaaggcc cgccgtcagg
     2401 gcgcgcgtgg gccgcatccg gctgtgggcg tgggccaggg ccagccagcc cagagccagg
     2461 agcagccagg gccagagcag gcccgtggcc agaggggcga tgcccgtcag g
//
LOCUS       DATGWW010000580         3922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_360154, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000580 DATGWW010000000
VERSION     DATGWW010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3922
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360154"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1033
                     /locus_tag="VK150_08450"
     CDS             <1..1033
                     /locus_tag="VK150_08450"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLP31377.1"
                     /translation="PEDRLLGGKGKGARIAFGILNIGRFKLGASSAGAGKRVLEYTLK
                     YAGERTQFGKPLTAFGLIQQKLANMAIRIFVGESMNFRTIGYLDEALARTSWESETGG
                     ADKMKAIEEYAVEASMAKVWGSEALFATADDAVQTFGGAGFSAEYPAEKIYRDCRINR
                     IFEGTNEINRLLIAGTFLKRCSGAEGLPLQEAATAPLDLPQDALLRTVALAKARALKV
                     IALAQADRGPKILDNQEAAARIANLLLEIYAMESAVIRARRMAETGHRWAGLAQDMAT
                     VYAQEAWNRVQAEARMLAAELASDAVLDTLVADLLAMHAPVPVALSGLRHDISRILVE
                     QGRYPLSPA"
     gene            1108..1629
                     /locus_tag="VK150_08455"
     CDS             1108..1629
                     /locus_tag="VK150_08455"
                     /inference="COORDINATES: protein motif:HMM:NF024818.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HLP31378.1"
                     /translation="MSPRPQPTQQERVLGEDDFIVSKTDLRGNITYGNRIFIQISGYT
                     EQELLGEPHNILRHPDMPRAVFKLLWDTLQAKREIWAYVKNLAKDGSFYWVFANITPS
                     FDSSGNPIGYYSVRRKPRPEAIQAIAPLYRTMLEAERRAGDGQAAMTASTAILQQVLE
                     QKGVSYEEFILGL"
     gene            1619..3061
                     /locus_tag="VK150_08460"
     CDS             1619..3061
                     /locus_tag="VK150_08460"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HLP31379.1"
                     /translation="MGSKVHFLVAAALALLLVFGYQAGTAGRLSTAAWTTFTLLVLVL
                     ALSLYTVHRILKAVDNLTQKLKQAAAGNLGQRITQIKSGAATHELAWALNDLLDQQEA
                     YFSEVFSAFDHAARGQTFRLAVDQGLHGAFKDAMKRINISVGSLGQVQQMALKEKLVS
                     QVTDLNSGNLIGNLRSIQEYLMNMTQELSIVGQLSKETAHEADDSRATIEHLVANLNQ
                     VAEMVAQTNAQITLLHEKSDEITQIVQVITDVADRTNLLALNAAIEAAHAGEVGKGFA
                     VVAEEVRTLSENTKDAAASIAATIESFGQATARMIQDSEQVKDLAEGSRSAVTDFRAQ
                     VLKFAGSAKTSLFQINKAQDFSFASLVKVDHFLYKQNGYRVIHQGTDSAEARAIQADH
                     RSCRLGNWYYQGQGAELFSQVPSFGTLEAPHTSVHQNIHQAVDLLQGHWENDHAIQQR
                     IYGHFEAAEQASEAVVQIIDRMVEERHRAM"
     gene            complement(3062..3754)
                     /locus_tag="VK150_08465"
     CDS             complement(3062..3754)
                     /locus_tag="VK150_08465"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLP31380.1"
                     /translation="MPEGRQVQQMFSAIAGKYDVLNHVLSGGVDFWWWWRMARASGAG
                     PGKRFLDVAAGTGDSSLALARRGAEVVSTDFTHAMLRLGPSKFARKGLAHRIWASSDA
                     DAQQLPFRDDSFDGLTICYGIRNVENRARAYAEFLRVLRPGGRLTILEFSTPVVPGLK
                     AFYDWYSLRVLPRIGAWISGDASAYTYLPESIRTFPDQGALAAELEAAGFRGVGWTNL
                     TGGIAALHTAAK"
BASE COUNT          733 a         1412 c         1211 g          566 t
ORIGIN      
        1 ccccgaggac cggctgctgg ggggcaaggg caagggcgcc cgcatcgcct tcggcatcct
       61 gaacatcggg cgcttcaagc tcggggccag ttcggccggg gccggcaagc gcgtgctgga
      121 atacaccctg aaatacgccg gggagcgcac gcaattcggc aagccgctca cagccttcgg
      181 cctcatccag cagaagctgg ccaacatggc catccgcatc ttcgtgggcg aaagcatgaa
      241 cttccgcacc atcggctacc tggacgaggc cctggcccgc accagctggg agagcgagac
      301 gggtggcgcc gacaagatga aggccatcga ggagtacgcg gtggaggcct ccatggccaa
      361 ggtgtggggc agcgaggccc tcttcgccac cgccgacgac gctgtgcaga ccttcggcgg
      421 cgcgggcttc agcgccgagt accccgccga gaagatctac cgcgactgcc gcatcaaccg
      481 catcttcgaa ggcaccaacg agatcaaccg cctcctcatt gccggcacct ttctgaagcg
      541 ctgcagcggc gcggaggggc tgcctttgca ggaggccgcc accgcccccc tcgacttgcc
      601 ccaggacgcc ctgctccgca ccgtggccct ggccaaggcc cgggccctca aagtcatcgc
      661 cctggcccag gccgatcgcg ggcccaaaat ccttgataac caggaggccg ccgcccgcat
      721 cgccaacctt ctgctggaga tctacgccat ggaatcggcc gtgatccggg cccggaggat
      781 ggccgagacg ggccaccggt gggccggcct ggcccaggac atggccaccg tctacgctca
      841 ggaggcctgg aaccgcgtcc aggccgaggc ccgcatgctg gccgctgagc tggcctccga
      901 cgctgtgctg gacaccctcg tggccgacct cctggccatg cacgcccccg tgcctgtggc
      961 cctgtccggc ctgcgccacg acatcagccg catcctggtc gagcaggggc gctaccccct
     1021 ctccccggcc tagacccggt tccttgttta agacattact cagcccgggg gcccaggcca
     1081 cccgatagag cgggggtgga gacccccatg agccccaggc cccaacccac ccagcaggaa
     1141 cgcgtcctcg gcgaagacga cttcatcgtg tccaagaccg acctgcgggg aaacatcacg
     1201 tacgggaacc ggatcttcat ccagatctcg ggctacaccg agcaggaact cctgggagag
     1261 ccccacaaca tcctgcggca tcccgacatg ccccgggcgg tgttcaagct cctgtgggac
     1321 accctgcaag ccaagcggga gatctgggcc tatgtgaaga acctggccaa ggacggcagc
     1381 ttctactggg tgttcgccaa catcacaccc tccttcgatt ccagcggcaa cccgatcggc
     1441 tactactcgg tgcgccgcaa gccccgcccc gaggccatcc aggccatcgc ccccctctac
     1501 cggaccatgc tcgaagctga gcgcagggcc ggcgacgggc aggcggccat gacggcgtcg
     1561 actgccatcc tccagcaggt tctcgaacag aagggcgtga gctatgaaga atttatcctt
     1621 gggctctaag gtccacttcc tggttgccgc ggccctggcg ctcctgctgg tcttcggcta
     1681 tcaggccggg accgccggtc gcctgtccac cgccgcctgg acgaccttca cgctgctggt
     1741 cctggtcctt gccctgtccc tctacaccgt ccaccgcatc ctcaaggccg tggacaacct
     1801 gacccagaag ctcaagcagg ccgcggccgg caacctcggc cagcgcatca cccagatcaa
     1861 gagcggggcc gccacccatg agctggcctg ggccctcaat gacctcctcg accagcagga
     1921 ggcctacttc agcgaggtgt tctccgcctt cgaccatgcc gcccgcggac agaccttccg
     1981 gctggcggtg gatcagggcc tgcacggcgc cttcaaggac gccatgaagc gcatcaacat
     2041 ctccgtgggc agcctcgggc aggtccagca gatggccctc aaggagaagc tggtctccca
     2101 ggtcaccgac ctcaactcag gcaacctcat cggaaacctg cgttccatcc aggaatacct
     2161 gatgaacatg acccaggagc tgagcatcgt ggggcagctg tcgaaggaga ccgcccacga
     2221 ggccgacgac agccgcgcga ccatcgagca cctggtggca aacctcaacc aggtggccga
     2281 gatggttgct cagaccaacg cccagatcac cctcctccac gagaagagcg acgagatcac
     2341 ccagatcgtc caggtgatca ccgatgtggc cgaccgcacg aacctgctgg cgctcaacgc
     2401 cgccatcgag gcggcccacg ccggcgaggt gggcaagggc ttcgccgtgg tcgccgagga
     2461 ggtccgcacc ctctcggaga atacgaagga cgccgccgcg agcatcgccg ccaccatcga
     2521 atccttcggc caggccaccg cccggatgat ccaggactcc gagcaggtga aggacctggc
     2581 cgagggcagc cgcagtgccg tcaccgactt ccgcgcccag gtgctgaagt tcgccggatc
     2641 ggccaaaacc tccctcttcc agatcaacaa ggcgcaggat ttcagcttcg cctccctggt
     2701 gaaggtggac cacttcctct acaagcagaa cggctaccgg gtcatccacc agggcacgga
     2761 ctccgccgag gccagggcca tccaggccga ccaccggagc tgccgcctgg gcaactggta
     2821 ctaccaggga cagggcgccg agctgttctc ccaggtgccc tccttcggaa ccctggaggc
     2881 tccccatacc agcgtccacc agaacatcca ccaggcggtg gacctgctgc aaggccactg
     2941 ggagaacgat cacgcgatcc agcagcgcat ctacgggcat ttcgaagcgg cggaacaggc
     3001 aagcgaggcg gtggtccaga tcatcgaccg catggtggag gagcgccacc gcgccatgtg
     3061 atcacttcgc ggcggtgtga agcgccgcga tgccgcccgt gaggttcgtc caacccaccc
     3121 cccggaagcc ggcggcctcc agctcggcgg ccagggcccc ctggtcgggg aaggtgcgga
     3181 tgctctcggg gaggtaggtg taggcggagg cgtccccgct gatccaggcg ccgatccggg
     3241 gcagcacccg cagactgtac cagtcgtaga aggccttcag gcccggcacc acgggcgtac
     3301 tgaactccag gatggtgagc cggcccccgg gcctcagcac ccgcaggaac tcggcatagg
     3361 cccgggcccg gttctccacg ttgcggatgc cgtagcagat cgtgaggcca tcgaaggaat
     3421 catcccggaa gggcagctgc tgggcgtccg cgtcggacga ggcccagatc cggtgggcca
     3481 gccccttgcg cgcgaatttg gaaggcccca ggcgaagcat cgcgtgggtg aaatccgtgc
     3541 tgaccacctc cgcgccccgg cgggccaggg ccaggctgga atcccctgtg cccgccgcga
     3601 cgtccaggaa gcgcttccca gggcccgcgc cgctggcccg ggccatgcgc caccaccacc
     3661 agaagtccac cccgcccgag agcacgtggt tcaggacgtc atacttcccg gcaatggccg
     3721 agaacatctg ctgcacttgc ctgccttccg gcatccaacc tccgcgggag cttccattga
     3781 accagatggc ccggcctacc cgaagcatcc atcccgtggc gcctgggtca ggtctggcct
     3841 ggcgcgggag ccgagtgggg cgtcgcgaca ccagagagca ggtggtcacc aataggccta
     3901 tcagcacaat aactatcttc ac
//
LOCUS       DATGWW010000581         2003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_360210, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000581 DATGWW010000000
VERSION     DATGWW010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360210"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="VK150_08470"
     CDS             <1..266
                     /locus_tag="VK150_08470"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HLP31381.1"
                     /translation="LPGVTFQEGRASMDPGDVLVIFTDGVVEAENAAGEELGDGPLAE
                     AVLRRPDAGADELFEALLVAAFQHLEEGKFRDDVTLVVIKRMG"
     gene            312..1151
                     /gene="htpX"
                     /locus_tag="VK150_08475"
     CDS             312..1151
                     /gene="htpX"
                     /locus_tag="VK150_08475"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF002826.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HLP31382.1"
                     /translation="MNQTKTLLLIVAMTGLLVWMGDMLGGRSGMVLALAIGLVMNGVS
                     YFFSDRIVLASYGAQPVTREQAPELHAIVANLAQRAGLPMPRIAIIPEDTPNAFATGR
                     NPDHAVVAVTEGIMRVLSRPELEAVIGHELGHVKNRDILIGSLAAVLAQAIMFLSRMA
                     MWVSPRDEEGRSNPLAGIAIMILGPLAAFLLQMAVSRSREYMADDYSAHLTGRPDLLA
                     SALERLHSYNQQLPMHTAEPATAHMMIVNPLSGGGLMSLFSTHPPMAVRVERLRRMPI
                     EAR"
     gene            1243..>2003
                     /locus_tag="VK150_08480"
     CDS             1243..>2003
                     /locus_tag="VK150_08480"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HLP31383.1"
                     /translation="MLGKGAMGEVYLGRDPRLGREVALKVISAGSAFGEEAQARFERE
                     ARAAAMLNHPHVVTVYEFGEDEGLHYLAMEFVQGEELESLIQAGQAPKAELLEVLAQI
                     CDGLGYAHERGVIHRDIKPANILVTRQGKRPHAKLMDFGVAQMGPSGLTQTGTWMGTV
                     SYMAPEYLDTGKSTSSSDLFALGVILYEILTGGRKPFQGETSTSVLNRILLHPPEPLR
                     PADLKDVSGRLLAVAERALAKRPEDRYPDAESLGAA"
BASE COUNT          318 a          698 c          684 g          303 t
ORIGIN      
        1 tgctgcccgg ggtcactttc caggagggcc gggcctccat ggaccccggc gatgtgctgg
       61 tcatcttcac ggacggcgtg gtggaagccg agaacgccgc gggcgaggag ctgggcgacg
      121 gtcccctggc agaggcggtg ctgaggcggc ccgacgccgg cgccgacgag ctgttcgagg
      181 ccctgctggt ggcggccttc cagcacctgg aagagggcaa gttccgggac gatgtcacgc
      241 tggtggtgat caagcgcatg ggctgagggg gccttgaacg ccttcgtatc ctggtacctg
      301 gaggcccctt catgaaccag accaagaccc tgctcctcat cgtggccatg accggcctgc
      361 tggtgtggat gggagacatg ctcggtggcc ggtccggcat ggtgctggcg ctcgcgatcg
      421 gcctcgtcat gaacggcgtg agctacttct tctccgacag gatcgtgctg gccagctacg
      481 gcgcccagcc cgtcacccgg gaacaggccc cggagctgca cgccatcgtg gcgaacctcg
      541 cccagcgggc cgggctgccc atgccccgca tcgccatcat ccccgaggac acgcccaacg
      601 ccttcgccac cgggcgcaac cccgaccacg cggtggtggc ggtgacggaa ggcatcatgc
      661 gggtgctcag ccggcccgag ctggaggcgg tcatcggcca cgagctgggc cacgtgaaga
      721 accgcgacat cctcatcggc agcctggcgg cggtgctggc ccaggccatc atgttcctct
      781 cccgcatggc catgtgggtc tccccccggg atgaagaagg ccgctccaac cccctggcgg
      841 gcatcgccat catgatcctc gggcctctgg cggccttcct gctgcagatg gccgtgagcc
      901 gctcgcggga gtacatggcc gacgactaca gcgcccacct gaccggccgg cccgacctgc
      961 tggcctcggc cctggagcgt ctgcacagct acaaccagca gctgcccatg cacaccgccg
     1021 agccggccac ggcccacatg atgatcgtga accccctcag cgggggtggg ctcatgagcc
     1081 tcttttcgac ccaccccccg atggcggtcc gcgtggagcg tctccgccgc atgcccatcg
     1141 aggcccggta ggacgccccg gtcgcctgga ttgaacgcca ggcgcacccc tgccgatagg
     1201 gttcccatgc gggagaggct aggcaaattc gaggtggtgc gcttgctggg caagggagcc
     1261 atgggcgagg tctacctggg gcgggatccc cgcctgggcc gggaagtcgc gctgaaggtc
     1321 atctcggcgg gatcggcctt cggcgaggag gctcaggccc ggttcgagcg ggaggcccgc
     1381 gccgcggcca tgctgaacca cccccatgtc gtcaccgtct atgagttcgg cgaggacgag
     1441 gggctgcact acctggccat ggaattcgtc cagggcgagg agctggaatc gctcatccag
     1501 gccggccagg cccccaaggc cgagcttctg gaggtactgg cgcagatctg cgacggactg
     1561 ggctacgccc acgagcgcgg ggtgatccac cgggacatca agcccgcgaa cattctcgtc
     1621 acgcggcagg gcaagcgccc ccacgccaag ctcatggatt tcggggtggc ccagatgggc
     1681 ccctcgggtc tcacgcagac cggcacctgg atgggcacgg tgagctacat ggccccggaa
     1741 tacctggaca cgggcaagtc caccagcagc tcagacctgt tcgcccttgg cgtgatcctc
     1801 tacgagatcc tcaccggcgg gcggaagccg ttccagggcg agaccagcac ctcggtgctg
     1861 aaccgcatcc tgctgcatcc cccggaaccc ctgcgccccg cggatctgaa ggacgtgtcc
     1921 gggcggctcc tggccgtggc tgaacgggcc ctggccaagc ggccggagga ccgctacccg
     1981 gatgcagagt ccctcggcgc cgc
//
LOCUS       DATGWW010000582         1974 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_360266, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000582 DATGWW010000000
VERSION     DATGWW010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360266"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VK150_08485"
     CDS             complement(<1..219)
                     /locus_tag="VK150_08485"
                     /inference="COORDINATES: protein motif:HMM:NF012497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31384.1"
                     /translation="MLLTLPDDRCLGPGEALRPVRIPGSKSVTNRALLLAALSPGTSR
                     LEGGLEAEDTRWMRQALRGLGFELKEDGG"
     gene            complement(260..649)
                     /locus_tag="VK150_08490"
     CDS             complement(260..649)
                     /locus_tag="VK150_08490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31385.1"
                     /translation="MRQQRGEGKVGCIITLLILGVITAAAIKAVPVYYGDSELVDACD
                     FIASGASKKPIETLEREVKDKARELGVVEALTDKGAIRITKTGGGDAGICTITLHYKR
                     TINFYDVYKFTRTIDKRITKPIFENIS"
     gene            complement(663..>1974)
                     /locus_tag="VK150_08495"
     CDS             complement(663..>1974)
                     /locus_tag="VK150_08495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31386.1"
                     /translation="DLSAPFVISELPPGKHQLELRAPCFRTKILELGPELATPLADHT
                     LEPIRLAPSKGTLTVTSAWPGGELFLAGQSKGPLPVTDLPVCSGPYDLMVRFPAGGFA
                     QRITVDEGKALRVEARPKPRLAFVGLEGGDFTGRARFLAQLDAFGDRLQHLAFFPRRP
                     DEPPKEALARLKASKEVELVLLATPVPDKVVHRVALVVATLDGEEEHLVVKPLEQDPL
                     AMLAARLNQVPPTREPGLGLALLDVPGEPGPWVLGASEAALKAGIQVGKPILQADGKP
                     VATTQALQQRLLVAKGSLSVTQDGAPVPLSLTSEALEIPLGSADLCYPALIARLRLQY
                     AGATGDDANLIKLNLALALMQFRKHDKAIELLRDARLSTVRGVSQGTLDYETGLCFLR
                     LGSAYHSEAAQAFRQALKYPQSTLLGPNGPLVAPLARQALEDLK"
BASE COUNT          288 a          621 c          749 g          316 t
ORIGIN      
        1 gccgccgtcc tccttcaact cgaaccccag cccccggagc gcctgtcgca tccagcgggt
       61 gtcctcggct tccagcccgc cctccaggcg gctcgtcccg ggcgacaggg cggccaggag
      121 cagggcgcgg ttggtgacgg acttggaacc cgggatccgc acgggacgca gggcttcgcc
      181 ggggccgagg cagcggtcgt cgggcagcgt cagaagcatg gagccagcgt ggaaggggac
      241 ggtccggatc ccgattggat caactgatgt tttcgaagat cggcttggtg atgcgcttgt
      301 cgatcgtcct ggtgaacttg tagacgtcgt agaaattgat ggtgcgcttg tagtgcaggg
      361 tgatggtgca gatccccgcg tcgccgccgc ccgtcttcgt gatgcggatg gcgcccttgt
      421 ccgtcagggc ctcgacgacg cccagctccc gggccttgtc cttgacttcc cgctccaggg
      481 tctcgatggg cttcttgctg gcgccgctgg cgatgaagtc gcaggcgtcc accagttcgc
      541 tgtcgccgta gtagacgggc acggccttga tggccgcggc ggtgatcacg cccaggatga
      601 gcagggtgat gatgcagccg accttgcctt cgcctcgctg ttgccgcatg ggttcctccg
      661 actcacttca ggtcttcgag ggcctgtctg gccagggggg cgaccagggg accgttggga
      721 ccgagaaggg ttgactgagg atacttcagg gcctgccgga atgcctgggc agcttcggaa
      781 tggtaggccg aacccaggcg gaggaagcag aggcccgttt cgtagtcgag ggtgccctgg
      841 ctgacgccgc gaacggtgct gaggcgcgcg tcccgcagca gctcgatggc cttgtcatgc
      901 ttgcggaact gcatcagggc caaggccagg ttcagcttga tgaggttggc gtcatccccg
      961 gtggctccgg cgtactgcaa gcgcagccgg gcgatgaggg cggggtagca gaggtcagcg
     1021 gaccccaggg ggatctccag ggcctccgag gtgagggaca gcggcaccgg cgccccgtcc
     1081 tgggtgacgc tgagggatcc cttggcgacc aggagccgct gctgcagggc ctgggtggtt
     1141 gccacgggct tgccgtccgc ctgcaggatc ggcttgccga cctggatccc ggccttgagg
     1201 gcagcctcgg aggcgccgag cacccagggc ccgggttcgc cgggcacgtc caggagggcg
     1261 agcccaaggc cgggctcgcg ggtgggtgga acctggttga ggcgggcggc cagcatggcg
     1321 agcggatcct gctccagggg cttcaccacc agatgctctt cctcgccgtc gagggtggcc
     1381 accaccagcg ccacccggtg caccaccttg tcgggcaccg gcgtggccag gaggaccagt
     1441 tccacctcct tcgaggcctt caggcgggcc agggcctctt tcggcggctc gtcagggcgg
     1501 cgcgggaaga aggccaggtg ctgcaggcgg tcgccgaagg catcgagctg ggccaggaac
     1561 cgggcccggc cggtgaagtc gcccccttcc aggcccacga aggccaggcg gggcttgggc
     1621 cgggcctcca cgcggagggc tttgccctcg tccacggtga tgcgctgggc gaagccgccc
     1681 gcggggaagc gcaccatgag gtcgtacggg cccgagcaca ccggcaggtc ggtcacgggg
     1741 agcggcccct tggactggcc ggccaggaac agttcgcctc cgggccaggc ggaggtcacc
     1801 gtgagggtgc ccttcgaggg ggccaggcgg atgggctcga gggtgtgatc cgccaggggc
     1861 gtcgcgagct cgggccccag ctccagaatc ttggtccgga agcagggggc gcgaagctcc
     1921 agctggtgct tgccgggagg cagctctgag atgacgaagg gggcggacag gtcc
//
LOCUS       DATGWW010000583         2619 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_119362, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000583 DATGWW010000000
VERSION     DATGWW010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2619
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119362"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1823
                     /locus_tag="VK150_08500"
     CDS             <1..1823
                     /locus_tag="VK150_08500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31387.1"
                     /translation="LERLPEARRDLEAAQRRGFKGRELDEALGLVYGKLYQRDLPAVE
                     VIQEPATRERRLAELQREFKGPALAHLEAAGMDPVLKAHIALLHGRYEEARNWAMTAR
                     RMDAERTDGTLLAAQIWEREGNDAFNRKDPDRALLCAREGTRVAKNLMEDVRSDPAVP
                     FIIGRLKDLEAVVLAQQGGDIRPLAEEGLSYIDKALALNQDLAPLWLARVSLLGTLGV
                     VDNMQADSAGIRHAEEMVEGSRRATTLAPDWGETHMRLAWSHQNLGNNLNQQGLDSGS
                     NYQDGYRAAMEAFRLQPWNPDALLMALTNIKGEVSAKMDDGLNPKEDMAKLLEIAKQW
                     EGFPGVSRLRALGISAEIPIHHGRSVWMAGGDPDPVFGRAMVEYQELMKAEPGQVGHL
                     ANLCYAAFERLKARGFSGRPGEDLIRETLPGLEAAIPHYPAVPLLKVCKAQLLTARLQ
                     ARTPGTMLDPSQVEAAGRAVSAMEAALKHPAVGEIRGWFRLAQAEAGSRALAKQALAD
                     FSEASRSMPVIRSPKVGMVRAYRALGTAVDLDRGLKLNEDLLKTSAAADPEPMLLQAV
                     LLRDLGRAEEAERWRQKALAAQPLLAGHPLMRAATGVSSR"
     gene            2041..2553
                     /locus_tag="VK150_08505"
     CDS             2041..2553
                     /locus_tag="VK150_08505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31388.1"
                     /translation="MLKPLALATLLLAVPGQAQVPNTHLGVPASELVTIDLSVRHDLS
                     TGAETLDQGIYQNGAWSFQAGAKPFRVPKGRTLVVTDAQAWVLHEPGTGTPASLELIL
                     ENGSSGYSGSMALFTFADIPANAMGVKRQTWTSGFMVPQGMTVKIWAQQFYPQSLMSM
                     ARVVLHGYYL"
BASE COUNT          422 a          912 c          908 g          377 t
ORIGIN      
        1 ttctcgagcg cctgccggag gcccgccggg accttgaggc ggcgcagcgc cgggggttca
       61 agggccggga gctggatgag gcactggggt tggtctacgg caagctctac cagcgcgatc
      121 tgccggcggt ggaagtcatc caggagccgg ccacccggga gcgacgcctg gccgagctgc
      181 agcgcgaatt caagggaccg gcgctggcgc acctggaggc ggccgggatg gatccggtcc
      241 tcaaggccca catcgccctg ctccacggcc gctacgaaga ggcccggaac tgggccatga
      301 ccgcccgacg gatggatgcg gaacggacgg atggcaccct gctggcggcc cagatctggg
      361 agcgggaggg gaatgacgcc ttcaaccgga aagatcccga ccgggccctg ctgtgcgccc
      421 gggaaggcac ccgggtggcc aagaacctga tggaagacgt gcgcagcgat cccgcggtgc
      481 ccttcatcat cgggcggctg aaggatctgg aagcggtcgt cctggcccag cagggcgggg
      541 acatccggcc attggcggag gagggtctct cctacatcga caaggccctc gcgctgaacc
      601 aggatctggc ccccctctgg ctggccaggg tctcgctgtt gggcaccctc ggcgtcgtgg
      661 acaacatgca ggccgacagc gccggcattc gccatgccga ggagatggtg gaaggcagca
      721 ggcgcgccac cacgctggcg cccgactggg gcgagaccca catgcgcctg gcttggtccc
      781 accagaacct gggcaacaac ctgaaccagc agggcctgga tagcggctcc aactaccagg
      841 atggctaccg ggcggcgatg gaggccttcc gccttcagcc ctggaacccg gacgcgctgc
      901 tgatggcctt gaccaacatc aagggcgagg tcagcgccaa aatggatgac gggctgaatc
      961 ccaaggagga catggccaag ctcctggaaa tcgccaagca gtgggagggc tttccgggcg
     1021 tgagccggct gcgggcgctg gggatttcgg cggagattcc gatccaccac ggacgcagcg
     1081 tctggatggc gggcggggac cccgatccgg tatttggccg ggccatggtc gaataccagg
     1141 aactcatgaa ggccgagccg gggcaggtgg gtcacctcgc caacctttgc tatgcggcct
     1201 ttgagcgcct caaggcccgg ggtttctccg ggcgtcctgg ggaggacctg atccgggaaa
     1261 ccctgcccgg ccttgaggcg gccattcccc actatccggc cgtgcccctg ctgaaagtct
     1321 gcaaggcgca gctcctgacg gcgcggctgc aggcccggac ccctgggacg atgctggatc
     1381 cttcccaggt ggaggcggcc ggcagggcgg tcagcgccat ggaggccgcg ctcaagcatc
     1441 ccgccgtggg ggaaattcgc ggctggttcc ggctggccca ggccgaagcg ggatcccgag
     1501 ccctcgccaa gcaggccctg gcggacttct cggaagcgag ccggagcatg ccggtgatcc
     1561 ggtcgcccaa ggtgggcatg gtccgcgcct atcgcgccct ggggacggcg gtggacctgg
     1621 accgcgggct gaagctgaat gaagacctgc tgaaaacctc cgccgcggcc gacccagagc
     1681 ccatgctcct gcaggccgtg ctcctcaggg atctcggccg ggcggaggag gcggaacgct
     1741 ggcgccagaa ggccctcgcc gcgcaacccc tccttgcggg tcatcccctg atgcgcgccg
     1801 ccacaggggt ctccagccgt tgatctcgtc cagccgttga ccaggtcgtc ggtgcaagga
     1861 cgcctggccc ctggccgccc cgtggccgga ttggacctgc gggtcagacg tccgagcggc
     1921 accagggaga cggtggccca cccgctttcc tgaaaccgtg cctgggaggc gcgacgggcg
     1981 gggccgagcc tggggatggc cgcggtccat gccgggtcgc gcccccaccg cggagttccc
     2041 atgctcaagc ccctcgccct cgccaccctc ctgctcgcgg ttcccgggca ggcccaggtc
     2101 ccgaacaccc acctcggcgt gcccgcctcg gagctggtca ccatcgacct cagcgtgcgc
     2161 cacgacctca gcaccggggc ggagacccta gaccagggca tctaccagaa cggcgcctgg
     2221 tccttccagg ccggcgcgaa acccttccgc gtgcccaagg gccgcaccct cgtcgtcacg
     2281 gacgcccagg cctgggtcct ccacgaaccc ggcacgggca cgccggcctc cctggagctg
     2341 atcctggaga acggttcctc cggctactcc ggcagcatgg ccctcttcac cttcgccgac
     2401 attcccgcca acgccatggg cgtgaagcgc cagacctgga ccagcggctt catggtgccc
     2461 cagggcatga ccgtgaagat ctgggcccag cagttctacc cgcagagcct gatgtccatg
     2521 gcgcgggtcg tcctgcacgg ctactacctc tgagccgggc catgcgaccc cggatcctgc
     2581 tcggactggc ccggtcttcc gtggtgcccc tcgtggcgg
//
LOCUS       DATGWW010000584         1986 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_157947, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000584 DATGWW010000000
VERSION     DATGWW010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1986
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157947"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1061)
                     /locus_tag="VK150_08510"
     CDS             complement(<1..1061)
                     /locus_tag="VK150_08510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31389.1"
                     /translation="MASPLRHIPMTPLDELRACLGNHLEGDAAAQVRLHHLLNQLRQQ
                     ALPDLGGRLVRTTTPAGLKRLIMGLTAKFDWPEWVPWLFQALQHEQDLGVFDEGCAAL
                     GRLEIRSAREALLKLADLRTDPDRQLILRRELGAQETQPLSFYLGRLLEGEGNARLAH
                     QGARGLAALARPEDLPALLEAMAGADPLAFRMLVRALTEAPGHLSGPPLLAWFTDTLL
                     TLEDLELLDDLSHRVHTGARTAARAELAEALSSRMMATHGEAVQALQKALAAGEAGNP
                     IPPLDALRAQAKGPYETFLTEALTILVEGKVARFAAMVTEAQDTLARQRNVLGTTLAQ
                     VCEGLVRLVAAGQFPADRVT"
     gene            1135..1830
                     /locus_tag="VK150_08515"
     CDS             1135..1830
                     /locus_tag="VK150_08515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31390.1"
                     /translation="MRALLPPCLVPLCLAVALQAQPPAFLAQLPPAARAEAQDIVDRA
                     DFIFDTRTQPKHVRLATMEKLFDHPRLSSAMWRHCQFVPGFYAFIHPDGAWSIDDTRG
                     LKGTLRLVYQRPGHRVYLVEGIAEKGRLPVPFAVKAKMLTSYHYWEGKDGFETYLQTW
                     TALDSALLGAVARPFKGYIKHRQDEFIAYINGNVATFGEFAELSPRDFQGPIRRDGDP
                     VALREFEALFLRR"
BASE COUNT          277 a          674 c          727 g          308 t
ORIGIN      
        1 gtcacccggt cggcggggaa ctggcccgcg gccaccaggc gcaccagccc ttcgcagacc
       61 tgggccaggg tggttcccag cacgttccgc tggcgggcga gggtgtcctg ggcttcggtg
      121 accatggcgg cgaaccgcgc caccttcccc tccacgagga tggtgagcgc ctcggtgaga
      181 aaggtctcgt aggggccctt ggcctgggcg cgaagcgcat ccaggggggg gatgggattg
      241 cccgcctcgc cggcggcgag agccttctgg agggcctgca cggcctcgcc gtgggtggcc
      301 atcatccggg aggagagggc ctcggccagt tcagcccgag ccgcggtgcg ggccccggtg
      361 tgcacccggt ggctcaggtc gtcgagcagc tccaggtcct ccagggtgag cagggtatcc
      421 gtgaaccacg cgagcagtgg cggaccggac aggtggccgg gcgcctcggt gagcgcgcgg
      481 accagcatcc ggaaggccag gggatccgcc ccggccatgg cctcgaggag ggcgggcagg
      541 tcctcgggcc gggcgagggc ggcaaggccc cgggcgccct ggtgggcgag gcgggcgttg
      601 ccctcgcctt cgagaagccg gcccaggtag aagctgaggg gctgggtctc ctgcgcgccg
      661 agctcgcggc gcaggatgag ctggcggtcc ggatccgtac gcaggtcggc gagtttcagg
      721 agggcctcgc gggcagagcg gatctccagc ctccccaggg cggcgcaacc ctcgtcgaag
      781 acgcccaggt cctgctcgtg ctggagggcc tggaacagcc agggtaccca ttcgggccag
      841 tcgaacttgg cggtgaggcc catgatgagc cgcttgagcc cggccggggt cgtggtccgc
      901 accaggcggc cccccaaatc gggcagggcc tgctgtctga gctggttcag caggtgatgg
      961 agcctcacct gggcggcggc gtcgccttcc aggtggttcc caaggcaggc acggagctcg
     1021 tccagggggg tcatggggat gtgtctgaga ggcgaggcca tccacttccc atcggccggg
     1081 aggtccggca ggtcaagatc caccattcgg cttgggaagt gctagcgttt tcacatgcgc
     1141 gctctgctgc ctccctgcct ggttccgttg tgcctggccg tggccctcca ggcccagccg
     1201 ccggccttcc tggcgcagct gccgccggcg gcgcgggccg aggcccagga catcgtcgac
     1261 cgggccgatt tcatcttcga cacccgcacc cagcccaagc atgtccgatt ggcgacgatg
     1321 gagaagctgt tcgaccatcc ccggctgagc tccgccatgt ggcggcactg ccagttcgtg
     1381 ccgggcttct acgccttcat ccacccggac ggcgcctgga gcatcgacga cacccggggg
     1441 ctgaagggga ccctccgcct cgtctaccag cgcccgggcc accgtgtgta cctcgtggag
     1501 gggatcgcgg agaaaggccg cctgccggtg cccttcgcgg tcaaggcgaa gatgctgacc
     1561 tcctaccact actgggaggg gaaggacggg tttgaaacct acctccaaac ctggaccgcc
     1621 ctggactcgg ccctcctggg cgcggtggcc cggcccttca agggctacat caagcaccgg
     1681 caggatgagt tcatcgccta catcaacggg aacgtggcca ccttcggcga gttcgccgag
     1741 ctcagccccc gggatttcca gggacccatc cgccgcgacg gggatccggt ggcgctccgc
     1801 gagttcgaag cgctgttcct gaggagatga tgggcctgtc cctggcggga tccttccggg
     1861 ccctcctgcg gccggcctcg gccttccgcg gtgcgccgcc caccctcggg cgggcggttc
     1921 gggacatggc cttgatatgg gtccccctgg ccctggtgaa cgccgggtgg accgcctggc
     1981 gtgcgc
//
LOCUS       DATGWW010000585         2541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_119618, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000585 DATGWW010000000
VERSION     DATGWW010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2541
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119618"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VK150_08520"
     CDS             <1..282
                     /locus_tag="VK150_08520"
                     /inference="COORDINATES: protein motif:HMM:NF013499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HLP31391.1"
                     /translation="GARGYARSEAKRGTPGRHRHLHFWALVVADKEVATEKGERMQFI
                     TFEDETGLCEAVAFPDAMRRRQRPFRVGDVVSVRGRATLQDKLAVLEVQ"
     gene            complement(289..717)
                     /locus_tag="VK150_08525"
     CDS             complement(289..717)
                     /locus_tag="VK150_08525"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HLP31392.1"
                     /translation="MRSPTATGLLLVGILCSRASAEIPRMDPGEAGIREAENAWSRAF
                     VTGDAAYLDDLLDSSYVSVNAKGDARAKSQIIALARQFAADHPGAKAQPLSPTSIIQV
                     KGAAAVVTHRNEKDTSVDVFYYVEGRWRAWFSQHTSIPLK"
     gene            complement(1109..1837)
                     /locus_tag="VK150_08530"
     CDS             complement(1109..1837)
                     /locus_tag="VK150_08530"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLP31393.1"
                     /translation="MRLLAFILSGLGILLGLYLLDRAGLWAEQRGWIYWRKKKASGHA
                     LGSATLALQDIFESGKARHVIEAKEDAKMEAPDPGSGRPSTLSTATEADLPRLFEVWE
                     SAVRATHTFLTEADIGRLSPLVREGLATFRPIHCLRDPRGEVFAFLGVFEGRIEMLFV
                     HASRRGQGFGRILVRHAVDTLGATLVDVNEQNDQAIGFYERLGFQTFARSDLDAAGFP
                     FPLLHMRLASPAPSDRTDPGLGGR"
     gene            complement(1866..2429)
                     /locus_tag="VK150_08535"
     CDS             complement(1866..2429)
                     /locus_tag="VK150_08535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31394.1"
                     /translation="MSDQTVPESLQGSPMPAEPTPAQVEAIHQRILKQKAHSSGAGWF
                     YWIAGLSLLTSIISLSGGTWSFLAGLGVTQVFDGIALALKNSGTGDWVKGLSLFLDLL
                     AAGTFILLGVFARKGSPAAYVTGMVLYGLDAVILLAFREWFGAGFHAFALIQIWAGFS
                     ALRWLNGRPAEAPTAPMAPSAPINEPS"
BASE COUNT          436 a          787 c          914 g          404 t
ORIGIN      
        1 ggggcccggg ggtatgcgcg cagcgaagcg aagcgcggaa cccccgggcg acatcgccac
       61 ctgcatttct gggccctggt ggtggccgac aaggaagtgg ccaccgaaaa gggcgagcgc
      121 atgcagttca tcaccttcga ggacgaaacc ggcctctgcg aggccgtggc ctttcccgat
      181 gccatgcgcc gccgccagcg ccccttccgg gtgggcgacg tcgtctccgt cagaggccgg
      241 gccaccctgc aggacaaact ggcggtgctg gaggtccagt gaacccgctt atttcagagg
      301 gatggaggtg tgctgggaga accaggccct ccagcgtccc tcaacgtagt agaacacatc
      361 gacggaggtg tctttctcgt tccgatgcgt cacgaccgcg gccgcgccct tgacttggat
      421 gatggacgtt ggtgacaggg gttgtgcctt agccccggga tgatccgccg caaattgcct
      481 ggccaaggcg atgatttgcg atttggccct ggcatcgcct ttcgcgttca cggaaacata
      541 ggatgaatca agcaggtcat cgaggtaggc ggcatcgccg gtgacaaacg ctcggctcca
      601 ggcattctcg gcttcgcgga tgcctgcttc gcccggatcc atccgcggga tctcggcaga
      661 ggctcggctg cacaagatgc cgacgagtag taagcccgtt gcggtgggtg atcgcatgag
      721 gttcccctgg atgggaaggg ctcgggtggc ggtccatggc attcaggcgg tggaatggtg
      781 cgacccgtgc ggagagaggt gggcgggatg agtgcctgcc cccatcccgg gcgatatgcc
      841 cgctacgttt ccagacccca ttgccgccgg atgtgaatgg gtgcagaaag cttcatccag
      901 gggtgagtca atgcgtttcg aatgtgagcc ggcaaggact cgggaaggag ccatctggac
      961 cggctgttcg cctcggccat ggttcacggg ccctggattg gtgaggcagg tcacgccgca
     1021 acacggatct catgccaccg ttctcgtgct ggcggccgac cgcctgtgcc cagctcccga
     1081 cccgtccact gaattcgccg agatcaagtc accttccgcc aagccccggg tcggtccggt
     1141 cagagggggc gggtgatgcc aaccgcatgt gcaggagcgg gaacgggaag ccggccgcgt
     1201 ccaggtcgga gcgggcgaag gtctggaacc caaggcgctc gtagaacccg atggcctggt
     1261 cattctgctc gttcacgtcc acgagggtgg cgcccagagt atccaccgcg tggcgcacga
     1321 ggatcctgcc gaaaccttgg ccacggcgag acgcgtggac gaacagcatc tcgatcctcc
     1381 cctcgaacac gccgaggaat gcgaagacct cgccccgcgg gtcgcgcagg caatggatgg
     1441 gcctgaaggt cgccaggccc tcccggacga ggggtgacag ccggccgatg tccgcctcgg
     1501 tgaggaaggt gtgggtggcc cgcacggcgg actcccacac ctcgaagagc cggggcaggt
     1561 ccgcctctgt ggccgtggaa agggtggagg gccggccgga tccgggatcg ggggcttcca
     1621 tcttcgcgtc ctccttcgct tcgatcacgt gccgggcctt gccggattcg aagatgtctt
     1681 gcagcgcgag agtggccgac ccgagcgcat ggccgctcgc cttcttcttc cgccagtaga
     1741 tccagccccg ctgctcggcc cagagcccgg cccggtccag caggtagagg ccaaggagga
     1801 tgccgagtcc ggagaggatg aaggcgagga ggcgcacggc gggggcccag gctgaaggta
     1861 ccctctcagg aaggctcgtt gatcggggcg gaaggtgcca tcggggccgt cggggcctcg
     1921 gcggggcggc cgttcagcca gcgcagcgcc gagaagccgg cccagatctg gatgagggcg
     1981 aaggcgtgga acccggcccc gaaccattcg cggaaggcca ggaggatgac cgcgtcgagg
     2041 ccgtagagca ccatgcccgt gacgtaggcc gccggggagc ccttccgggc gaagacgccg
     2101 agcaggatga acgtgccggc cgcgaggagg tcgaggaaca ggctgagccc cttcacccag
     2161 tcgcccgtgc ccgagttctt cagggcgagg gcaatgccgt cgaacacctg ggtgacgccg
     2221 aggccggcca ggaaggacca ggtgccgccg gacaggctga tgatggatgt cagcaaggag
     2281 aggccggcga tccagtagaa ccagcccgct ccgctcgaat gggccttctg cttgaggatc
     2341 cgctggtgga tggcctcgac ctgggccggg gtgggttcgg ccggcatggg gcttccctga
     2401 agcgactccg ggacggtctg gtcggacatg ggttcctcgc gtggaagtgg acgtggtggt
     2461 tgaaatgggt gtcgcgccca tcctcccaca agggcaccgc ggacctccag gggcgcggcg
     2521 cccgcgccgt cctgccccgg g
//
LOCUS       DATGWW010000586         2089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_119678, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000586 DATGWW010000000
VERSION     DATGWW010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119678"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="VK150_08540"
     CDS             complement(<1..206)
                     /locus_tag="VK150_08540"
                     /inference="COORDINATES: protein motif:HMM:NF013179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HLP31395.1"
                     /translation="MASSPNIADRAALIEALPVGALLADGSGRILAANGAACRLLGLS
                     REGLLATGLFEPRWKVQARDGGRAP"
     gene            complement(246..1418)
                     /locus_tag="VK150_08545"
     CDS             complement(246..1418)
                     /locus_tag="VK150_08545"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HLP31396.1"
                     /translation="MANEGEARLRPKILLVDDEENVLQAYTRILRTKFKVDTAEGGER
                     ALEALMEKGPHAVIISDMRMPGMDGVELLARVKSRFPGTVRIMLTGNADQGTAISAVN
                     TGEIFRFLNKPCDSELLISTLDQAVRQHELITAEKALLDGTLKGSIRMLVDLLSLLDP
                     ISFGRAQELAELAEEVAREMGMEHAWTLGIASILSQIGLLTIPEGVMTKIHAGTFLNS
                     HERDLANRIPEIGADLIRNIPRMEEVAQAVLYMNKNYNGSGFPVDDVKEDAIPLGGRI
                     LRVVWDYERLLPRRGEESKVLSDMATRTTWYDMAVIQALGRCLGREVSRGREEAVIAV
                     KLHELRIGQVLAEGIETMDGLLVLPQGTRLNLAHLQKLRNFARLSGISEPLHVREG"
     gene            complement(1408..>2089)
                     /locus_tag="VK150_08550"
     CDS             complement(1408..>2089)
                     /locus_tag="VK150_08550"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HLP31397.1"
                     /translation="DPGTFSLGQEAQSRCAAVARQLGCKDTWEIEIGALLAPIGRIAL
                     PQSILAGQGPGRDALQLLDMAPEVGARLVGRIPRMEAVADIIRYHRRGFDGSGIPLDG
                     PVGTAIPLGARILKAVWDFSAIEAARRSRAVALEEIRLHAGAYDPEILKVLLDEFRQA
                     TSAAPPVRHVQIRDLRRGMVLVDDVRTPQGLQVLARGLRLGTGHIEFLTNLAELLDVQ
                     ERVAVRGE"
BASE COUNT          308 a          731 c          698 g          352 t
ORIGIN      
        1 ggggcccggc cgccgtccct ggcctggact ttccagcggg gttcgaacag gcccgtcgcg
       61 agcaagcctt cccgggacag cccgagcagc cggcaggccg ctccattggc ggccaggatc
      121 cggcccgacc cgtcggccag cagcgcgccc accgggagcg cctcgatgag cgcggcccgg
      181 tcggcaatgt tcggtgagct ggccatctgt ctgccctgcc ttgcatgaag ggtggcgccc
      241 ggccgtcatc cttcccggac gtggagcggc tcgctgatgc ccgagagccg ggcgaagttg
      301 cggagcttct ggaggtgcgc gaggttgagc cgcgtgccct ggggcaggac cagcaggccg
      361 tccatcgtct cgatgccctc cgccagcacc tggccgatgc ggagctcgtg aagcttcacc
      421 gcgatcaccg cctcctcccg cccgcgggag acctcccggc ccaggcaccg ccccagggcc
      481 tggatcaccg ccatgtcgta ccaggtggtg cgggtcgcca tgtcgctgag gaccttcgat
      541 tcctcacccc gcctcggcag cagccgctca tagtcccaga ccacgcgcag gatccttccc
      601 ccgagaggaa tcgcgtcctc tttcacgtca tccacgggga agcccgagcc gttgtagttc
      661 ttgttcatgt agaggacggc ctgggccacc tcttccatcc gtggaatgtt ccggatcaag
      721 tcggcgccga tctccggtat gcggttggcg aggtcccgct catggctgtt gaggaaggtg
      781 cccgcgtgga tcttggtcat cacgccttcc ggaatggtga gcaggccgat ctgcgacagg
      841 atggacgcga tcccgagggt ccacgcgtgc tccatcccca tctcccgggc cacctcctcg
      901 gccagctcag ccagctcctg ggctcggccg aaggagatcg gatcaagcag ggagagcagg
      961 tccaccagca tccggatcga gcccttgagg gtgccatcca ggagggcctt ttcggcggtg
     1021 atcagctcat gctgccggac cgcctggtcc agggtgctga tgagcagctc ggagtcgcag
     1081 ggcttgttga ggaagcggaa gatctcgccc gtgttcaccg cggagatggc ggtgccctgg
     1141 tcggcgtttc cagtgagcat gattcgcacc gttcccggga atcgggattt gacgcgcgcg
     1201 agcagctcca cgccatccat cccgggcatc cgcatgtccg aaatgatcac ggcgtggggc
     1261 cccttctcca tgagcgcctc cagggcccgc tctccgccct ccgccgtgtc gaccttgaac
     1321 ttggtccgca ggatccgggt gtaggcctgc agcacgttct cctcgtcgtc caccaggagg
     1381 attttcgggc gcaggcgggc ttccccttca ttcgccacgg acggccaccc tttcctggac
     1441 gtcgagcagc tcggcgaggt tggtcaggaa ctcgatgtgc cccgtcccca gacgcagccc
     1501 ccgggccagg acctggagcc cctgtggcgt gcgcacatca tccaccagga ccatgccacg
     1561 tcggaggtcg cggatctgca cgtggcggac cggaggcgcc gcggacgtgg cctgtctgaa
     1621 ctcgtcgagc aggaccttga ggatctctgg atcgtaggcg ccggcgtgga gccggatctc
     1681 ctccagcgcg accgcccggc tgcggcgggc ggcctcgatg gccgagaagt cccagactgc
     1741 cttgaggatc cgagcgccaa ggggaatggc cgttcccacc gggccatcca gcgggatgcc
     1801 cgatccgtcg aagccccgcc ggtggtagcg gatgatgtcg gccacagcct ccatccgggg
     1861 aatgcggccc accaggcgcg ctcccacctc cggggccatg tccaggagct gcagggcgtc
     1921 ccggcctggt ccctggcccg ccaggatgct ctgcggcagg gcgatccggc cgatgggagc
     1981 cagcagggcc ccgatctcga tttcccaggt gtccttgcag ccgagttggc gggccacggc
     2041 ggcacagcgg ctctgcgctt cctggccgag gctaaaggtc ccgggatcc
//
LOCUS       DATGWW010000587         2439 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_119693, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000587 DATGWW010000000
VERSION     DATGWW010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2439
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119693"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1291
                     /locus_tag="VK150_08555"
     CDS             <1..1291
                     /locus_tag="VK150_08555"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLP31398.1"
                     /translation="QVKTIVVAGIADFFPLVARGLIWAKLKLSGMLPALGLPTVRLPR
                     ALHQGSLHLAKEHLLPEAVTAAAITRDSLALLQYTGGTTGTSKGAMLTHGNLLANLEQ
                     IAEITRIYLTHGEETVLTVLPMYHVIAFTINLLFGFHSGSHSILVPNPRPLKNLEPAF
                     RKHEITWMTAVNTLLKALPAEPWFRPEMTRKMLGAFAGGMQTHPSVLQAWEAFTGCLV
                     IEGFGLSEASPLVTYNAAVKDGTRLRRTMAQVGGVGLPLPGTQVRIVDDEGRDLAPGE
                     HGEIVVQGPQVMRGYWNQPDETARTLRGGWLHTGDIGCFDADGYLQVTDRKKDMIIVS
                     GFNVFPNEVEACIALHPDVADVAVVGVPHEDTGEAVRAYVVLRKELSVEEIRAHCRRL
                     LVNYKVPTSFSFLTEIPKNAVGKALRRELRTAAAPES"
     gene            complement(1301..>2439)
                     /locus_tag="VK150_08560"
     CDS             complement(1301..>2439)
                     /locus_tag="VK150_08560"
                     /inference="COORDINATES: protein motif:HMM:NF015013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HLP31399.1"
                     /translation="NLRHRFALAASVSVFWNLAFIAFGWTALRVLERKGTVPLETVAT
                     VCAVAVLAGGVLQLLVVLPAVRKEGFGLAFGLHLGDPWVRKALRRMGPGLLAAGIYPI
                     NALISAMLASMLPNGAQMVLYNSGMMGEMVLGLFAMSLATASLPALSRQAEARDWPAL
                     NRSLTQSISASALLVLPASAGLAVLAAPICALLFRTGAYDPAASDWTALTLVFQSLGL
                     VFVAAQRLGNQALYALKDYRGPAALAGFTLVLNVALSLALLKPLGTGGLALANGLASL
                     AGLAGVLLRLRPRLPGMDLRPLLNATGRALGACLLMGLLAWGGARGLGLDAPHAFSRL
                     ALALRLLPLVALCAGSYGVAAAALGHPEARDLASKVRRKLFGGA"
BASE COUNT          405 a          856 c          879 g          299 t
ORIGIN      
        1 ccaggtgaag accatcgtgg tggcgggcat cgccgatttc ttccccctgg tcgcgcgggg
       61 cctcatctgg gccaagctga agctgtccgg catgctgccg gccctgggcc tgcccacggt
      121 ccgactgccc cgggcgctgc accagggctc cctccacctg gcgaaggaac acctcttgcc
      181 cgaggcggtg accgccgcgg cgatcacccg cgacagcctg gcgctgctgc agtacaccgg
      241 gggcaccacg ggcaccagca agggcgccat gctgacccac ggcaacctcc tggctaacct
      301 cgagcagatc gccgagatca cgcggatcta cctcacccac ggcgaggaga cggtgctcac
      361 cgtgctgccg atgtaccacg tcatcgcgtt caccatcaac ctgcttttcg gcttccacag
      421 cggcagccac agcatcctgg tgcccaatcc caggcccctc aagaacctcg agccggcgtt
      481 ccggaagcac gagatcacct ggatgaccgc ggtgaacacg ctgctcaagg cgctgccggc
      541 cgagccctgg ttccgcccgg agatgacccg gaagatgctc ggcgccttcg cgggcggcat
      601 gcagacccac ccctccgtgc tgcaggcctg ggaagccttc accggctgcc tggtgatcga
      661 gggcttcggc ctcagcgagg ccagccccct ggtcacctac aacgccgccg tgaaggacgg
      721 cacccgcctg cggcgcacca tggcgcaggt gggcggcgtg ggcctgcctc tgcccggaac
      781 gcaggtccgc atcgtggatg acgaggggcg cgacctggcc cccggcgagc acggcgagat
      841 cgtggtgcag ggcccccagg tgatgcgggg ctactggaac cagcccgacg agacggcgcg
      901 gaccctgcgc gggggctggc tgcacaccgg cgacatcggc tgcttcgacg ccgacggcta
      961 cctgcaggtc accgaccgca agaaggacat gatcatcgtc agcggcttca acgtctttcc
     1021 caacgaggtg gaggcctgca tcgcgctgca tccggatgtg gcggacgtgg cggtggtggg
     1081 cgttccccac gaggacacag gcgaagccgt gcgcgcctac gtggtgctgc gcaaggagct
     1141 gtcggtcgag gagatccgcg cccactgccg gcgcctgctc gtgaactaca aggtgcccac
     1201 cagcttcagc tttttgacgg agatccccaa gaacgccgtg ggcaaggccc tccggcggga
     1261 gctgcggacc gccgcggcgc ccgagagctg agccgccgcc tcaggctccg ccgaacagct
     1321 tgcgccgcac cttcgaggcc aaatcccggg cctcgggatg cccgagcgct gcagcggcga
     1381 cgccgtagct ccccgcgcag agcgccacca gcggcaggag ccgcagggcc agggccaggc
     1441 ggctgaaggc gtggggcgcg tccaggccga ggccccgcgc gccgccccag gccagcaggc
     1501 ccatgaggag gcaggcgccc agggcccggc ccgtggcgtt caggagggga cgcagatcca
     1561 tgccgggcag gcggggacgg aggcggagca gcacgcccgc cagacctgcc aggctggcga
     1621 ggccgttggc gagggcgagc ccgcccgtgc ccaggggttt cagcagcgcg aggctgaggg
     1681 ccacgttcag cacgagggtg aagcccgcga gggcggccgg gccgcggtag tccttcagtg
     1741 cgtagagtgc ttgattgccc aggcgctgcg ccgccacgaa aaccaggccc agggactgga
     1801 acaccagggt gagggctgtc caatccgagg ccgcgggatc gtaggccccg gtgcggaaga
     1861 gcagggcgca gatgggcgcg gccagcaccg ccagccccgc cgaggcgggc agcaccagca
     1921 gggccgaggc cgagatggat tgggtgaggc tgcggttcag ggcgggccag tcccgggcct
     1981 cggcctgccg cgagagcgcg ggcaggctcg cggtggccag gctcatggcg aagaggccca
     2041 gcaccatctc gcccatcatg ccgctgttgt agagcaccat ctgggcgccg ttcggcagca
     2101 tggaggccag catggcgctg atgagcgcgt tgatggggta gatgcccgcg gccagcaggc
     2161 ccgggcccat gcggcggagg gccttgcgca cccagggatc gcccaggtgc agcccgaacg
     2221 cgaggccgaa gccttccttc cgcaccgcag gcagcaccac cagcagctgg aggacgccgc
     2281 ccgccagcac ggcgaccgcg cacaccgtgg cgacggtctc gagggggacg gtgcccttcc
     2341 gttccagcac ccgcagcgcg gtccagccga aggcgatgaa ggcgaggttc cagaagacgg
     2401 agacggaagc cgccagggcg aagcggtggc gcaggttca
//
LOCUS       DATGWW010000588         2156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_386424, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000588 DATGWW010000000
VERSION     DATGWW010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2156
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386424"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VK150_08565"
     CDS             complement(<1..320)
                     /locus_tag="VK150_08565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31400.1"
                     /translation="MSPWLLLSMPGPVSQGLFAKGLFANGPGEGGTSERGGRVPADGG
                     SLERELEATRSMRVPPSALRVGCCRESAWVVWPDTKPGPVPPHPLLLALLDRSMESYG
                     EAKAG"
     gene            373..1437
                     /locus_tag="VK150_08570"
     CDS             373..1437
                     /locus_tag="VK150_08570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31401.1"
                     /translation="MSVLIQGSRLSQPPQFQSPATFTATGHGLDGGTWPPLADTGSRS
                     AALPAMPASPAGSWRDSLGGDDLMSVLIQGSRLSQPTQAHPPDMASPLGGEWGGSAQH
                     LPTPSGHPMATPAGAASSSPRGSQQWPMPGMPTAAESGTLLDVVNSGWRAGTVQSPAG
                     HEAGSWHEAGSWTGAWNDPGPHPPSLGDTGSGARGAAPGDSASQVPQSEPNSVQRLGI
                     GSRISQQDFDRARDLIGLGLSTPAALASIGRSDIPLETMRRWIKASGLRYTTTGVKPS
                     LTAQQINTARAAQEAYISHTGTTRKSARAAYNALNDPSINYSSFRNYFSNAGLTAHGT
                     EQLEAAKKRSESGPAGGTGP"
     gene            complement(1609..>2156)
                     /locus_tag="VK150_08575"
     CDS             complement(1609..>2156)
                     /locus_tag="VK150_08575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31402.1"
                     /translation="PGSSRAGTWRESLGAGGGSGPSANKQASESAYNGYVQEGTRGES
                     GRASTVGKSKESETLHEDWRHNMRRSSEVGHVDSWGNAYTHSEIEANNMIHIRTSDGT
                     SDMRGGEYIDYYKKRGSISADRPVTQETYDKDQERVSALLDAGDPELMSAEAKYGRRW
                     WWRVSEKDFEQRMAKLNGGEE"
BASE COUNT          355 a          773 c          670 g          358 t
ORIGIN      
        1 ccggcctttg cctctccata cgattccatg gaacgatcga gcagggccag cagcagcggg
       61 tggggcggta cgggcccggg cttcgtgtcc ggccaaacga cccaggcaga ctcacggcag
      121 cagccgaccc gcagcgccga gggcggcacc ctcatggacc tggtggcctc cagttcacgc
      181 tccaggctcc cgccgtccgc cggcaccctg cccccgcgct ctgacgtgcc gccctccccg
      241 ggcccgttcg caaacagtcc cttcgcgaac agcccctggg acaccggccc cggcatcgag
      301 agcagcagcc atggggacat gccgccatcc ccctcgggca cctggcgaca gagcctgggc
      361 ggcggcgacc tcatgagcgt gctgatccag gggtctcggc tctcgcagcc gccgcagttc
      421 cagtcgccgg ccacgttcac tgccacgggc catggcctgg acgggggcac atggccgccc
      481 ctggccgaca ccggcagccg cagtgcggcg ctgccggcca tgccggcttc ccccgccggc
      541 tcctggcgag acagcctggg tggagacgat ctgatgagcg tgctgatcca gggctccagg
      601 ctatcgcagc cgacgcaggc ccatccgccc gacatggcat cgcccctggg gggtgagtgg
      661 ggcggcagcg cccagcactt gcccacgcct tctggccatc cgatggcaac accggcgggg
      721 gcggcgtctt catcaccccg gggctcgcag caatggccta tgcccggcat gcccaccgca
      781 gcggaaagcg gcacgttgtt ggacgtcgtc aattcaggct ggcgggccgg cacggtgcag
      841 agcccggcag ggcatgaggc tggatcctgg catgaggctg gatcctggac gggtgcctgg
      901 aacgacccgg gtcctcatcc tccatcactg ggcgacactg gcagtggcgc caggggggcc
      961 gcgcccggtg attcagcgag ccaggtgccg cagtcggagc cgaactcggt gcagcggttg
     1021 ggtattggca gtcgaatcag ccagcaagat ttcgatcgcg cgcgcgacct cattggacta
     1081 gggctctcca cgcccgcggc cctcgcgagc atcggtcgca gtgacattcc gctcgagacc
     1141 atgaggcgat ggatcaaggc atccggcctg aggtacacga cgaccggcgt aaaaccctcg
     1201 ctcaccgcgc agcagatcaa caccgcccgc gcggcgcagg aggcttacat cagccacaca
     1261 gggacgaccc gcaagtctgc tcgagccgcc tacaacgcgc tgaacgatcc atcgatcaac
     1321 tactcctcgt tcaggaacta cttcagcaat gcgggcctca ccgcacacgg gacagaacag
     1381 ctggaagccg cgaagaagcg ctcggaatca ggccccgccg ggggcacggg cccataggcg
     1441 cacgggggag cgccgggcgc gcctctgcag gatgcgagga ggacggcgac ggagccgcac
     1501 gtgcgcgcac ttgcggagac ctcggccccc cgccgatccc ggagctggcg gcgctgcctc
     1561 ccgcgtgggt accagcacgt gcaagccaag ccgtcaaccc gcgctgcctt actcctcgcc
     1621 accgttgagc ttggccattc tttgttcaaa gtccttctcg ctgacacgcc accaccatcg
     1681 ccgaccatac tttgcttccg cactcatcaa ctccggatct cctgcgtcca gcagcgcaga
     1741 gaccctctcc tggtccttgt cataggtttc ctgggtcacg ggacggtcgg cgctgatgga
     1801 cccgcgcttc ttgtagtagt cgatgtattc accgccccgc atgtctgagg tgccatcgct
     1861 ggtccggatg tggatcatgt tgttcgcttc aatttcactg tgcgtgtatg cattgcccca
     1921 ggaatcgaca tgaccaacct cactacttct tcgcatattg tggcgccagt cctcatgcaa
     1981 ggtttcgctc tcctttgact tgccgacagt actggcgcga ccggactccc cccgcgtccc
     2041 ttcttgcaca tagccgttgt atgccgattc cgatgcctgc ttgttcgcgc tcggcccgga
     2101 gccgccgccg gctcccaggc tttctctcca tgtaccggcg cgcgaggagc ctggaa
//
LOCUS       DATGWW010000589         2156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_158094, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000589 DATGWW010000000
VERSION     DATGWW010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2156
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158094"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1537
                     /locus_tag="VK150_08580"
     CDS             <1..1537
                     /locus_tag="VK150_08580"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HLP31403.1"
                     /translation="FNLGFAPEQLEKNVHELSGGQKSRVMLAKAILQGQDLLLLDEPT
                     NHLDLPSLRWLEGFIQDTDATVAIISHDRYFLDKIATEILELDLGRSRSYEGNYSEFM
                     EKKEQELELQERHFEQQQAYIKKQEEYIRRNIAGQNTKQARGRRTHLSKLDRIQKPLR
                     DRRKVKFTFPETQRSGDVALVLENAAVGWGGKPLYAPLEQLQIKRGQKMGIVGLNGTG
                     KSTLLKAISEEIPFISGQARLGSQVKLGYFDQHHRNLDPRNTVFQQIHAVTPQAMKQD
                     ILGFLAKFQFRGDEVDKPVTALSGGERARLSIATLIRNGVNLLLLDEPTNHMDIPSME
                     AMEDTILSFTGAVIVVTHDRYLLGRVADSLLRIHEGRAEFREGGYEDHQAWVDLDLGQ
                     EEEAGSGGAPKAALPSAPKAMAAPKPAPKAPAPAKPVAVDKDKQRAVKRFEKQVAEAE
                     ARVGELEAKLAGLQKEMAAMDPSDWQAFNARLDAQKALEADLAYAMSDWEAAQGALED
                     AQR"
     gene            complement(1550..>2156)
                     /locus_tag="VK150_08585"
     CDS             complement(1550..>2156)
                     /locus_tag="VK150_08585"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HLP31404.1"
                     /translation="LLAVKWIILLLPWLLVALAYQCRWPDRLKAALPGSLAWLHHGFR
                     ALLFVPTLLLHGIFPGELGEETGWRGYLVRRWASRPLVAAALTVPVWASFHLPIVFSS
                     TQKGHPVLNTVFLLSIAASAVPFAAFYLWSRSIWPCAVLHLSWNLWNPVLLGDVYLGR
                     PSFFGGQVRIFNGEALFGLIFNALVAAWLIRAWRRRPATAA"
BASE COUNT          431 a          715 c          744 g          266 t
ORIGIN      
        1 cttcaatctg ggcttcgctc cggagcagct ggagaagaac gtccatgaac tcagcggcgg
       61 ccagaagagc cgcgtgatgc tggccaaggc catcctccag ggtcaggacc tgctgctgct
      121 ggacgaaccc accaaccacc tggacctgcc cagcctgcgc tggctcgagg ggttcatcca
      181 ggacaccgac gccaccgtgg cgatcatcag ccacgaccga tacttcctcg acaagatcgc
      241 caccgagatc ctggagctgg acctgggccg gtcgcggagc tacgaaggca actactccga
      301 gttcatggag aagaaggaac aggaactcga gctgcaggag cgccacttcg agcagcagca
      361 ggcctacatc aagaagcagg aggagtacat ccgccgcaac atcgcgggcc agaacaccaa
      421 gcaggcccgc ggacggcgca cgcacctctc caagctcgac cgcatccaga agcccctgcg
      481 tgaccgccgc aaggtgaagt tcaccttccc cgagacccag cgcagcggcg acgtggccct
      541 ggtgctggag aacgccgccg tgggctgggg cggcaagccg ctttacgcgc cgctggagca
      601 gctgcagatc aagcgcggcc agaagatggg catcgtggga ctcaacggca ccggcaagtc
      661 caccctgctg aaggccatct ccgaggagat tcccttcatc tcgggccagg cgcgcctggg
      721 cagccaggtg aagctgggct acttcgacca gcaccaccgg aacctggatc cgcggaacac
      781 ggtgttccag cagatccacg cggtgacccc gcaggcgatg aagcaggaca tcctgggctt
      841 cctggccaag ttccagttcc ggggcgacga ggtggacaag ccggtcaccg cgctttccgg
      901 cggcgagcgg gcacggctca gcatcgccac gctcatccgc aacggcgtga acctgctgct
      961 gctggacgaa cccaccaacc acatggacat ccccagcatg gaagccatgg aggacacgat
     1021 cctcagcttc acgggggccg tcatcgtggt gacccacgac cgctacctgc tgggccgcgt
     1081 ggccgactcg ctgctgcgca tccacgaggg ccgggccgag ttccgggagg gcggttacga
     1141 ggatcaccag gcctgggtgg acctagacct ggggcaggag gaggaggccg gctccggcgg
     1201 ggcgccgaag gcggccctgc cttcagctcc gaaggccatg gccgcgccga aacctgcccc
     1261 caaggcgccg gcgcccgcga agcctgtggc cgtcgacaag gacaaacagc gggcggtgaa
     1321 gcgcttcgag aagcaggtgg ccgaggccga ggcccgggtg ggcgagctgg aggcgaagct
     1381 cgctggcctg cagaaggaga tggccgccat ggacccctcc gactggcagg ctttcaatgc
     1441 ccggctggac gcccagaagg ccctggaggc cgacctggcc tacgccatga gcgactggga
     1501 agccgcccag ggcgccctgg aagacgccca gcgctgaggt tggtccccct caggccgccg
     1561 tggctggcct gcgccgccag gcccggatca gccaggcggc cacgagcgcg ttgaagatca
     1621 gcccgaagag ggcttcgccg ttgaagatgc gcacctggcc gccgaagaag ctgggccggc
     1681 ccaggtagac atcgcccagc aggacggggt tccacaggtt ccagctgagg tggagcaccg
     1741 cgcagggcca gatcgagcgg ctccacaggt agaaggccgc gaagggcacc gccgaggcgg
     1801 cgatggagag gaggaagacc gtgttcagga ccgggtgtcc cttctgggtg ctggagaaga
     1861 cgatgggcag gtggaagctg gcccacaccg gcaccgtcag cgccgcggcc acgagggggc
     1921 ggcttgccca ccggcgcacc aggtagccac gccagcctgt ctcttcaccg agctcgcccg
     1981 gaaagatgcc gtggaggagc aaggtgggga cgaagagcag ggcgcggaat ccgtggtgca
     2041 gccaggccaa ggatcctggc aacgccgcct tcaaccgatc gggccagcgg cactggtagg
     2101 cgagggccac cagcagccaa ggcagcagca ggatgatcca cttcacggcc agcagg
//
LOCUS       DATGWW010000590         1837 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_271640, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000590 DATGWW010000000
VERSION     DATGWW010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1837
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271640"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..1766)
                     /locus_tag="VK150_08590"
     CDS             complement(126..1766)
                     /locus_tag="VK150_08590"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HLP31405.1"
                     /translation="MSLLVLKDLFARHRARATGLWRLGQEPGRTIYLESGDVVFAVST
                     HPLDRLTHLLVERGKITQAQLDYAMANLNPAMSIGKNLIEMGFITQRDLLDVARAQVE
                     RVVWASLAAPEGTPTFEAKDLDATTVRLPFDTAAMLLAGVLGLKDRERVLEELGPLNQ
                     VVVLEGRRHQDLALPPDLMRLPILLDGSRTLLELSREAGVEPFRLGAFVLFLREMGWA
                     RLHELPPLDRHALELALDTPEPVLSQTLPDPAPAPQTPLFAEIHASQLPTTNLDHLSE
                     ALDQLGADDEVELDDPFPPEPDPRVAGEPALPIHHQAAEGSTERLEPPTAPESPASSS
                     RRPAILLSVLILLALGWFGMTRYRRPPASKVTTTPEAAKPDAPKPDTPKGDAPKPAPE
                     APKVEAPKPEPPAPEPARAPEPAPVKAAPAKPEVTAVPSKAERLQAITQGNWKLALAQ
                     GAAQRKALQGRWSLRLEIACQGSTVQHAADLMKAQDPDLFLVPMAMRDGRTCYQVFVG
                     SFGSEAAAKAAAKRLPAPFLAEGNRPKPFRVAQIPDRQ"
BASE COUNT          262 a          557 c          712 g          306 t
ORIGIN      
        1 agatcattgg gccatattta atggaccagc tcgtatacat ataaagtatg cccgagctta
       61 gatcgtttgt aaaggagcgc tcattaaaat aaggatatag cctgcgattc gtgcgtttag
      121 tcaggctact gccggtccgg gatctgggcc acccggaagg gtttgggccg gttgccctcg
      181 gcgaggaagg gggcgggcag gcgcttggcc gccgccttgg ccgccgcctc cgatccgaag
      241 gaccccacga aaacctggta gcacgtgcgg ccatcgcgca tggccatcgg caccaggaaa
      301 agatcggggt cctgagcctt catgaggtcg gccgcgtgct gcacggtgct gccctggcag
      361 gcgatctcca ggcgcaggga ccagcggccc tgaagggcct tccgctgggc cgccccctga
      421 gccaaggcca gcttccagtt gccctgggtg atggcctgca aacgctccgc cttggaagga
      481 accgcggtca cttccggttt cgcaggggct gccttcaccg gggctggttc gggggccctg
      541 gcgggctcgg gtgccggggg ctcaggtttg ggggcttcca cctttggcgc ctcgggggcg
      601 ggcttgggtg cgtcgccttt gggggtgtcg ggcttgggcg cgtcgggctt ggccgcctct
      661 ggtgtcgtcg tgaccttgga ggcaggcgga cggcggtagc gtgtcatccc gaaccagcca
      721 agggccagca ggatcaacac gctcaggagg atggctggcc tccgggagct ggaggcgggg
      781 gactccgggg cggtcggcgg ctccaggcgc tcggtgctgc cctcggccgc ctggtggtgg
      841 atggggaggg cgggctcccc ggcgacccgg gggtccggct cgggggggaa ggggtcgtcc
      901 agctccactt cgtcatcggc ccccagctga tccagggcct cggagaggtg gtccaggttg
      961 gtggtgggca gctggctggc gtggatctca gcgaacagcg gggtctgggg ggcgggggcc
     1021 gggtcgggca gggtctggct gaggacgggc tccggggtgt ccagggccag ttcgagggcg
     1081 tgccggtcga gggggggcag ttcgtggagc cgggcccagc ccatctcccg caggaagagg
     1141 acgaaggctc cgagccggaa gggctccacc cccgcctcgc ggctgagttc cagcagggtg
     1201 cggctgccgt ccagcaggat gggcagcctc atgaggtccg ggggcagggc caggtcctgg
     1261 tgccggcggc cctccagcac gaccacctgg ttcagggggc ccagctcctc caggacccgc
     1321 tcgcggtcct tcaggcccag gacgccggcc agcagcatgg cggcggtgtc gaagggcagg
     1381 cgcaccgtgg tggcgtccag gtctttggct tcgaaggtgg gcgtcccctc cggggcggcg
     1441 aggctggccc agaccacccg ctccacctgg gcccgggcca cgtccagaag gtcgcgctgg
     1501 gtgatgaagc ccatctcgat gaggttcttg ccgatggaca tggccgggtt gaggttggcc
     1561 atggcgtagt cgagctgggc ctgggtgatc ttcccccgtt ccaccagcag gtgggtgagg
     1621 cgatccaggg gatgggtgct gacggcgaag accacatcgc cggattccag atagatggtg
     1681 cggccgggct cctggcccag ccgccacagg cccgtggccc gggcgcggtg ccgggcgaag
     1741 agatctttga ggaccagaag gctcatgtga tcacccaccg ctcgagcttg agtttgccga
     1801 ccttcacgag gagggactga ccggggcgca gctccag
//
LOCUS       DATGWW010000591         2731 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_120093, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000591 DATGWW010000000
VERSION     DATGWW010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2731
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120093"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2731)
                     /locus_tag="VK150_08595"
     CDS             complement(<1..>2731)
                     /locus_tag="VK150_08595"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLP31406.1"
                     /translation="GLGYAREELLALRVPDIDATVTPERWKAIWEGVRNGTRTLQETT
                     QRRKDGTFRTVELSRSMVTFEGRDLLIVSARDISSRKAMMAALQASEERFSRAFQASP
                     DAININRLDGTYLEVNEAFTTLSGWTREETLGRSTVDLGLWTDLADRDRMQQMLQAEG
                     RFTGLESTFRMKDGSLRTGLVSGTLIQVDGETCLLSITRDITERKAAESAIRYSEDKF
                     SRAFHASPDAINLTRLDDGTYLDVSEGFEKISGWTREEAIGKTALELDIWADPGDRAK
                     AVELIRTQGEYTGLEIPFRRKDGRIIIGMMSGKVMDVDGVPCLLSVTRDITERKASEA
                     ALRVAEQRLRTVLAHSQAVIYQLDPEGRFLLSEGLGLANLGLSPGEAVGHSALDMFRD
                     DQGTLAQIQRALQGEASREITPAGGRQFDNFLTPVLDDQGRVESVIGIALDVTERQLV
                     EETLRAERGLFIGGPVMVIKWRSGPDWPVEYVSPNVESILGYTVLELCEGRVPFKSLI
                     HPDDLARLARELAEVQGKGLSHYEQQYRLRTASGTYRWFYDFSAAAGSGPNPSYFLGY
                     LLDITDRRQAEEALRQSQKLESLGILAGGIAHDFNNLLTVVLGNLNLAQMHLPEGHAA
                     HAYLTNMETTVLRATELTKQMLAYSGRGHFLVRPQDLNHVVEEVTHLLEVSISKKIRL
                     RLDLGRGLPTIHADAAQIQQVVMNLVTNASDAIGDQEGAIHLSTTAVLLDEEDLQSEY
                     RGDGLAPGRYVLLEVTDTGCGMPPEVMARIFDPFFTTKAAGRGLGLSAMLGILRGHGA
                     GLSIQSTVGRGSRFRLCFPASEGASAEEGAMPAEATPSLLQGRILLVDDEDLILRTTG
                     ASLEALGLKVTTAQDGVEALALFREADPRPDLVLMDLTMPRMDGREAFQAMHDL"
BASE COUNT          390 a          904 c          981 g          456 t
ORIGIN      
        1 ccaggtcgtg catggcctgg aaggcctccc gcccgtccat ccggggcatg gtgaggtcca
       61 tgagcaccag gtccggccgg ggatccgcct cccggaacag ggccagggcc tccacgccat
      121 cctgggccgt ggtcaccttc agccccaggg cctcgaggga cgccccggtg gtccgtagga
      181 tcaggtcctc gtcatccacc aggaggatcc ggccctgaag caggctgggg gtggcctcgg
      241 caggcatggc tccctcctcg gcggaggccc cttccgaggc cgggaagcac agccggaagc
      301 ggctgccccg gcccacggtg ctctggatgc tgaggcccgc gccatgcccc cgcaggatgc
      361 ccagcatggc cgacaggccg aggccgcggc cggcggcctt ggtggtgaag aagggatcga
      421 atatgcgggc catcacctcg ggcggcatgc cgcagccggt gtcggtcacc tcaaggagga
      481 cgtaccggcc cggggccagt ccgtcgcccc ggtactcgct ctggagatcc tcctcgtcca
      541 gcagcaccgc cgtggtggac aggtggatgg cgccttcctg gtctccgatg gcgtccgagg
      601 cgttggtgac gaggttcatg accacctgct ggatctgcgc cgcgtccgcg tggatggtgg
      661 gcaggcccct ccccaggtcg agccggaggc ggatcttctt cgagatggag acttccagga
      721 ggtgcgtgac ctcctccacc acatggttga ggtcctgggg ccgcaccagg aaatggccgc
      781 ggcccgagta ggcgagcatc tgcttggtca gctccgtggc ccgcagcacc gtggtctcca
      841 tgttggtgag gtaggcatgg gccgcgtggc cctctggcag gtgcatctgg gccagattga
      901 ggttgcccag caccacggtc agcaggttgt tgaagtcgtg ggcgatgccc ccggccagga
      961 tgccgaggct ctcgagcttc tgggactgcc gcagggcctc ctccgcctgg cggcggtccg
     1021 tgatgtcgag caggtagccg aggaagtagg aggggttggg accggaacca gccgcggccg
     1081 agaaatcgta gaaccagcgg taggtcccgg aggcggtcct caggcggtac tgctgctcgt
     1141 agtgggacag ccccttgccc tggacctcgg cgagttcccg cgccagccgg gccaggtcgt
     1201 cgggatggat caggctcttg aacggcaccc ggccctcgca gagctccagg accgtgtagc
     1261 cgaggatgga ctcgacgttc ggggagacgt attccaccgg ccagtccgga ccagaccgcc
     1321 acttgatcac catgacggga ccgccgatga agaggccccg ctccgcccgc aaggtctcct
     1381 ccacgagctg ccgttcggtg acatccaggg cgatgccgat gacgctttcc acgcgcccct
     1441 ggtcgtccag gaccggggtg aggaagttgt cgaactggcg gccgccggcc ggggtgatct
     1501 cccgggacgc ctctccctgg agggctcgct ggatctgcgc gagggtcccc tggtcatccc
     1561 ggaacatgtc cagggcgctg tggcccacgg cttccccggg ggaaagcccg aggttggcga
     1621 gccccaggcc ctcggacagc aggaagcggc cttccgggtc cagctggtag atcacggcct
     1681 gggagtgggc cagcacggtg cggaggcgct gctcggccac gcggagggcc gcctcggagg
     1741 ccttccgctc cgtgatgtcc cgggtgaccg acagcaggca cggcacgccg tcgacgtcca
     1801 tcaccttgcc agacatcatg ccgatgatga tgcggccgtc cttccggcgg aacgggatct
     1861 ccaggccggt gtactcgccc tgggtgcgga tgagctccac cgccttggcc cggtcgccgg
     1921 gatcggccca gatgtccagc tcgagggcgg tcttgccgat ggcctcctcc cgggtccagc
     1981 cgctgatctt ctcgaagccc tcgctgacgt ccaggtaggt gccgtcgtcg agccgcgtga
     2041 ggttgatggc gtccgggctg gcgtggaagg cccgggagaa cttgtcctcg ctgtagcgga
     2101 tggccgattc ggcggccttc cgctcggtga tgtcccgggt gatggagagc aggcaggtct
     2161 ccccgtccac ctggatgagg gtgcccgaca ccaggcccgt gcggagggat ccgtccttca
     2221 tgcggaaggt ggattccagg cctgtgaatc gcccctccgc ttgaagcatc tgctgcatgc
     2281 ggtcccggtc ggcgaggtcg gtccagaggc ccagatccac cgtggatcgg cccagggtct
     2341 cctcccgggt ccagccgctc aaggtcgtga aggcttcgtt cacctccagg taggtgccgt
     2401 cgagccggtt gatgttgatg gcgtcggggc tcgcctggaa ggccctggag aagcgctctt
     2461 cgctggcctg gagggcggcc atcatggcct tccggctgga gatgtcgcgg gccgagacga
     2521 tgagcaggtc ccggccctcg aaggtgacca tggaccggga gagctccacc gtcctgaacg
     2581 tgccgtcctt gcggcgctgg gtcgtctcct ggagcgtgcg tgtgccgttg cggacccctt
     2641 cccagatggc cttccagcgc tcgggggtca cggtcgcgtc gatgtcgggc acgcggaggg
     2701 ccagcagctc ctcgcgggcg tagccgaggc c
//
LOCUS       DATGWW010000592         1696 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_361175, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000592 DATGWW010000000
VERSION     DATGWW010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361175"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..351)
                     /locus_tag="VK150_08600"
     CDS             complement(<1..351)
                     /locus_tag="VK150_08600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31407.1"
                     /translation="MNGPTRQRQLPDSPGPAPVASGGDGANHRLARGLLAGAWILAAA
                     LHLSQGPEGRIHSWPMSYLVLEALATLSLAARAGRSSGKARVAWWLLTCSAFLEVPNL
                     LLIDLHQRGLLPAGT"
     gene            complement(448..>1696)
                     /locus_tag="VK150_08605"
     CDS             complement(448..>1696)
                     /locus_tag="VK150_08605"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HLP31408.1"
                     /translation="DLGKLVTMEMGKIIAEGEGEVQEMIDICDFAVGLSRQLYGLTMP
                     SERRMHRLQEQWHPLGVVGVITAFNFPVAVWSWNTAIALVCGDTVLWKPSSKTPLTAI
                     ACTRIAEKVLRDFGYDPAICSLAIGKGSDIGDLINTDPRVALVSYTGSVPGGRHVGKL
                     VQERFGKHILELGGNGAVIVSEKGDLDIAVRSIYFGAIGTSGQRCTSTRRVIVHSSIH
                     DAFLARLQALYAKTPIGDPRKNENLMGPLVDSGAVETMLGAIETVKAEGGRILCGGER
                     LPLPGGCYITPCIVAAPKDLPMMKEETFAPVLYVVPYDTIEEAIALQNGVPQGLSSAI
                     ITNDQRESELFLSAAGSDCGIANVNTGTSGAEIGGAFGGEKETGGGRESGSDAWKTYM
                     RRQTSAINFSGQVELAQGITLEL"
BASE COUNT          262 a          551 c          610 g          273 t
ORIGIN      
        1 ggtccccgcg ggaagcaagc cgcgctggtg gaggtcgatc aagaggaggt tcggcacttc
       61 caggaaggcc gagcacgtca ggagccacca ggcgacccgg gccttgccgg aggaacggcc
      121 ggcccgcgcg gccaggctga gggtcgccaa cgcctccagc accaggtagg acatgggcca
      181 ggaatggatg cgtccctcgg gcccctggct caggtgcagg gcggcggcaa ggatccaggc
      241 gcccgccaga agcccccggg ccagtcggtg gttcgcgcca tctccgcccg aagcgacagg
      301 cgccgggccg ggggaatcgg gaagctgtcg ttggcgcgtt ggcccgttca aggggggcct
      361 ctcgggagga atgccctgag cttagccgga aggcatgaaa aaaggagagg ggagccgcgg
      421 cccccctccg gaaggatctg gacaggctca gagctccagg gtgatgccct gggccagctc
      481 cacctgccca ctgaagttga tggcgctggt ctggcggcgc atgtaggtct tccaggcgtc
      541 ggaaccgctc tcgcggccgc cgccggtctc cttctcgccg ccgaaggctc cgccgatctc
      601 ggcgccgctg gtgcccgtgt tcacgttggc gatgccgcag tcgctgcccg ccgccgagag
      661 gaacagctca ctctcgcgct ggtcgttggt gatgatggcg ctcgacagcc cctggggcac
      721 gccgttctgc agggcgatgg cctcctcgat ggtgtcgtag ggcaccacgt agagcaccgg
      781 ggcgaaggtc tcctccttca tcatcggcag gtccttggga gccgcgacga tgcagggcgt
      841 gatgtagcag ccgccgggca gcgggaggcg ctcgccgccg cagaggatgc ggccgccttc
      901 cgccttcacc gtctcgatgg cgccgagcat ggtctccact gcgccggagt ccaccagggg
      961 tcccatgagg ttttcgttct tccggggatc gccgatgggc gtcttggcgt agagagcctg
     1021 gaggcgcgcc aggaaggcat cgtggatgct gctgtgcacg atgacgcgcc gggtggaggt
     1081 gcagcgctgg cccgaggttc cgatggcgcc gaagtagatg gagcgcaccg cgatgtcgag
     1141 gtcgcccttc tcgctgacga tcacggcgcc attgccgccc agttccagga tgtgcttgcc
     1201 gaagcgctcc tgcaccagct tgcccacgtg cctgccgcca ggcaccgaac cggtgtagga
     1261 caccagggcc acccgggggt cggtgttgat gaggtcgccg atgtcgctgc ccttgccgat
     1321 ggccaggctg cagatggccg ggtcgtagcc gaagtcgcgc agcaccttct cggcgatcct
     1381 ggtgcaggcg atggcggtga gcggcgtctt ggaggaaggc ttccacagca ccgtgtcgcc
     1441 gcaaaccagc gcgatggcgg tgttccagct ccagaccgcc acggggaagt tgaaggcggt
     1501 gatgacgccc accacgccga gagggtgcca ctgctcctgg aggcggtgca tgcgccgctc
     1561 gctgggcatc gtgagcccgt agagctggcg ggagaggccc acggcgaagt cgcagatgtc
     1621 gatcatctcc tgcacctcgc cttcgccttc ggcaatgatc ttgcccatct ccatcgtgac
     1681 gagcttcccg aggtcc
//
LOCUS       DATGWW010000593         1892 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_361462, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000593 DATGWW010000000
VERSION     DATGWW010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361462"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..839)
                     /locus_tag="VK150_08610"
     CDS             complement(<1..839)
                     /locus_tag="VK150_08610"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HLP31409.1"
                     /translation="MQKRWVIVTVAGAALAAGMFFTLKGGDGKSKKAEASTPFRLGKV
                     QAEDLQVSVREVGVVDPLTKVDVKSTVSGRIVSLRVREGATVKAGEVLAEVEPDVNQA
                     QTLSDVQGSVSQAKLSFLNADREYVQQAALFKSGLISEQAHRDARTKRDLAEESFKSA
                     QTRYQIVEDRGIPISGNASTQKARVTAPMNGVVIKKGAELGDTITSGVSSFNAGTVVF
                     TVADLNSLIVKVNLNEVDIAKVKVGQPVRITLDAYPQKAFTGKVRFVAPAADLVEKIK
                     VFKV"
     gene            1153..1551
                     /locus_tag="VK150_08615"
     CDS             1153..1551
                     /locus_tag="VK150_08615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31410.1"
                     /translation="MNTPLKRVAFFLAAGLTGISLMAQAPTGQQVERKGERVERRGEA
                     QERRGERNDRRGERKQRQGARMEKRGEALQAQGKVAEGKALEKAGERREKVGEAQERK
                     GERQERRGERKERRGERIERKGERMEAKGK"
     gene            complement(1613..>1892)
                     /locus_tag="VK150_08620"
     CDS             complement(1613..>1892)
                     /locus_tag="VK150_08620"
                     /inference="COORDINATES: protein motif:HMM:NF013067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HLP31411.1"
                     /translation="DLLTYNVRQFIGSYATVLDGVDAITFTAGIGTHSTYVRAKVCSK
                     LSFLGVKLDVEANEHGTGERIISTPDSKVAVTVVPTNEELMIARETVR"
BASE COUNT          327 a          591 c          660 g          314 t
ORIGIN      
        1 accttgaaga ccttgatctt ctccaccagg tccgcagcgg gggcgacgaa gcgcaccttc
       61 ccggtaaagg ccttctgcgg ataagcgtcc agggtgatgc gcacgggctg gcccaccttc
      121 accttggcga tgtccacctc attgaggttc accttcacga tgagggaatt gaggtcggcc
      181 accgtgaaca ccaccgtgcc ggcgttgaag gaactgacgc ccgaggtgat ggtgtcaccc
      241 agctccgcgc ccttcttgat caccacgccg ttcatggggg cggtgacccg ggccttctgg
      301 gtggaggcgt tgccgctgat gggaatgccc cggtcctcga cgatctggta gcgggtctgg
      361 gcgctcttga aggattcctc ggcgaggtcc cgcttggtgc gcgcgtcgcg gtgagcctgc
      421 tcggagataa gccctgactt gaagagggcc gcctgctgga catattcccg atcggcgttc
      481 aggaaactga gcttcgcctg ggagacgctg ccctggacgt ccgagagggt ctgcgcctgg
      541 ttcacgtcgg gctcgacttc ggccagcact tcgcccgcct tcacggtggc gccttcgcgc
      601 acccgcaagc tgacgatgcg gcccgacacg gtggatttca catccacctt ggtgaggggg
      661 tcgaccaccc ccacttcgcg gacgctgacc tgcaggtcct cggcctggac cttgcccaac
      721 cggaacggcg tggaagcctc ggccttcttg gacttgccgt cgccgccctt gagggtgaag
      781 aacatgccgg ccgccagggc cgccccggcc acggtcacga tgacccatcg cttctgcatg
      841 gaacccccct gatgggaaag acgccggact cgccgggatg atggaatgcc tacggggcag
      901 agtctggggc cgtttagagg gggcgcagct cttgaatcgg cgacctgtct tccagaatcg
      961 gccaacgatc cggcgggcgg gagaaggccg gatgtggcgt cccgcgacgt cccctgtggc
     1021 aacgttcaac tcaaaacgaa ttaaaccttt atttaatgtt ggtaaaacag acctttgcga
     1081 attggcatgg caggcgctac ctggcgcttc gggacgattc cccttcgcgg cggcgccgca
     1141 gcaggagcaa ccatgaacac ccccctcaag cgtgtggcct tcttcctcgc ggccggcctc
     1201 accggcatct ccctcatggc gcaggccccc accggtcagc aggtggagcg gaagggcgag
     1261 cgcgtcgagc gccgcggcga ggcccaggaa cgtcgcggtg agcgcaacga ccggcgcggc
     1321 gagcgcaagc agcgccaggg cgcgcggatg gagaagcggg gtgaggccct ccaggcccag
     1381 ggcaaggtgg ccgaaggcaa ggccctggag aaggcgggcg agcgtcgcga gaaggtcggc
     1441 gaggcccagg agcgcaaggg cgagcggcag gagcgccggg gcgagcgcaa ggagcgacgc
     1501 ggcgagcgca tcgagcgcaa gggcgagcgc atggaggcga agggcaagta gggccagggt
     1561 cgaacacaga acggcccccg gttgggggcc gttcgcatgg ttcgaagctg gttcagcgca
     1621 cggtttcccg ggcgatcatc agctcttcgt tggtgggcac cacggtcacg gccaccttgg
     1681 aatcgggggt gctgatgatg cgctcccccg tgccgtgctc gttggcttcc acatccagct
     1741 tcacgcccag gaagctgagc ttgctgcaga ccttggcgcg gacataggtg ctgtgggtgc
     1801 cgatgccggc ggtgaaggtg atggcatcca cgccgtcgag caccgtggcg taggagccga
     1861 tgaactgccg cacgttgtag gtcaggaggt cc
//
LOCUS       DATGWW010000594         2360 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_120655, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000594 DATGWW010000000
VERSION     DATGWW010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120655"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VK150_08625"
     CDS             complement(<1..392)
                     /locus_tag="VK150_08625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 family protein"
                     /protein_id="HLP31412.1"
                     /translation="MANLSPVAAWTLSDVHHFARRAGFGVTPEGAAALQAQAPGAAID
                     AWIDGTGAAYDLSAFTAALATADVVLEPQVNANTSVAGSVDVPAVPGPHPFLVEGSDA
                     WRNSLNTAQAAWAWRMQHNPYGFQERMAL"
     gene            complement(401..889)
                     /locus_tag="VK150_08630"
     CDS             complement(401..889)
                     /locus_tag="VK150_08630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31413.1"
                     /translation="MRLALSGLALSLLCAWLCACGGGGGGPAAVAQPPAPPTTCPIPV
                     AKANPSFSADLVPALQSSCGSSATSCHGGTSPTGHVAFSGTATQIHAQLVNVTPANAP
                     AGWLRVKPGDPAGSWILEKVTKDQPGGSGFGTRMPQAAPNLCQPTVDTLSAWISAGAA
                     NN"
     gene            1036..1383
                     /locus_tag="VK150_08635"
     CDS             1036..1383
                     /locus_tag="VK150_08635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31414.1"
                     /translation="MPLDVPTPLFVGERLRDLILCYAGPWAFVPYLRNREDTELLWHA
                     RQGVILAFAECVGALALVIVGLFPIFGSVSWRVILPLWLLWCLGMSVTSILQATKGKR
                     HRIPVIHQFVDYL"
     gene            complement(1406..>2360)
                     /gene="queA"
                     /locus_tag="VK150_08640"
     CDS             complement(1406..>2360)
                     /gene="queA"
                     /locus_tag="VK150_08640"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: protein motif:HMM:NF001140.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HLP31415.1"
                     /translation="CSHRAIRDLPELVPQGSLCVPNDVRVRHARLFLRRAGGGAGEAL
                     LLRSLGAGVFEAMVKPGARLKPGGAATVVDPVSKAELARLDVLDTLPEGLRAVRVHAE
                     HGLDWDEIDRIGRLPLPPYIEHLADGEDETRYQTVFSAAEGEAVAAPTAGLHFTPELI
                     DRLRADGCGWHPVRLHVGLGTFRPMTADRLEDHAMHEERFEIPADTAALLEAAFRDRR
                     RPVLCVGTTSLRTLEGAWDGVRLQRQGATRLFITPGYALRTADHLLTNFHLPESTLFV
                     LVASLLGLDLAQAAYAEAVRARYRFFSYGDAMLILHARRGG"
BASE COUNT          336 a          786 c          886 g          352 t
ORIGIN      
        1 agggccatcc gctcctggaa gccgtagggg ttgtgctgca tgcgccaggc ccaggcggcc
       61 tgggcggtgt tcaggctgtt gcgccaggcg tccgagcctt ccacgaggaa gggatggggc
      121 cccgggacgg cgggcacatc cacgcttccg gccacgctgg tgttggcgtt cacctggggc
      181 tccagcacca cgtcggcggt ggccagcgcg gcggtgaagg cgctgaggtc gtaggcggcg
      241 ccagtgccat cgatccaggc gtcgatggcg gcgcccgggg cctgggcctg cagggccgcg
      301 gccccctcgg gggtgacgcc gaacccggcc cggcgcgcga agtgatggac atcggacagg
      361 gtccaggcgg cgacagggga gaggttggcc atggcgactc ctagttgttg gccgctccgg
      421 cgctgatcca cgccgagagg gtgtccacag tgggctggca gaggttgggc gcggcctgcg
      481 gcatgcgggt gccgaacccc gacccgcccg gctggtcctt ggtgactttc tcgagaatcc
      541 aggagcccgc gggatcgccg ggcttcaccc gcagccatcc tgccggggcg ttggccggag
      601 tcacgttgac cagctgcgcg tggatctggg tggccgtgcc cgagaaggcc acgtgaccgg
      661 tgggcgaggt gccgccatgg cagctggtgg cggaagaccc gcagctgctc tgcagggccg
      721 gaacgaggtc cgccgaaaag gacggattgg ccttcgccac ggggatgggg caggtggtgg
      781 gcggcgccgg gggttgggcc acggcggcgg gaccgcctcc ccccccgccg caggcgcaga
      841 gccaagcaca aagcagggac agggcgagtc cggaaagggc caggcgcatg gtgctccagg
      901 gtgggtaacc cagcatggac ggcttcccgt gcgggtcaag gttacgacag ctaatccttt
      961 ggatgtattc ctgagacacg aacagacagc acagggttta gccttccctg cgttatcctc
     1021 gatccggagg ttgccgtgcc cctggatgtc ccgacccccc tgttcgtggg ggagcgcctg
     1081 cgagacctga tcctgtgcta cgccgggccc tgggccttcg ttccgtacct gcggaaccgc
     1141 gaggacacgg agctcctctg gcacgcgcgg cagggcgtga tcctggcctt cgcggagtgc
     1201 gtcggcgccc tggccttggt gatcgtgggc ctcttcccca tcttcgggtc ggtgtcctgg
     1261 cgggtgattc tcccgctctg gctgctctgg tgcctcggca tgtccgtgac cagcatcctg
     1321 caggccacca agggcaagcg gcaccgcatt cccgtcatcc accagttcgt ggactacctc
     1381 tgacccgtcg aatccctgtg gggcctcagc ccccgcgccg ggcgtggaga atcagcatgg
     1441 cgtcgccgta gctgaagaag cggtagcgcg cccgcaccgc ctcggcgtag gcggcctggg
     1501 cgaggtcgag gcccagtagg ctcgcgacca gcacgaagag ggtgctctcg ggcaggtgga
     1561 agttggtcag caggtgatca gcggttcgca gggcgtagcc gggggtgatg aagagccgcg
     1621 tggcgccctg ccgctggagc cgcacgccgt cccaggcgcc ttcgagggtg cgcagcgacg
     1681 tggtgcccac acacaagacc ggacggcgtc gatcgcggaa ggccgcttcg agaagcgccg
     1741 ccgtgtcagc ggggatttcg aagcgctcct cgtgcatggc gtggtcttcc aggcggtcgg
     1801 cggtcatggg ccggaaggtg ccgaggccca cgtgcagccg caccgggtgc cagccgcacc
     1861 catccgcccg gaggcggtcg atgagttcag gcgtgaagtg caggccggcg gtgggggccg
     1921 ccacggcctc gccttccgcg gcggagaaca cggtctggta gcgggtctcg tcctcgccgt
     1981 cggcgagatg ctcgatgtag ggcggcaggg gcaggcggcc gatgcggtcg atctcgtccc
     2041 aatcgagccc gtgctccgcg tgcacccgca cggcccgcag gccttcgggc agcgtgtcca
     2101 gcacgtcgag ccgggccagc tccgccttgg acacgggatc caccaccgtc gcggcgccgc
     2161 ccggcttcag ccgggcgccg ggcttgacca tggcctcgaa cacgcccgcg cccaggctcc
     2221 gcagcagcag ggcctcgccc gcgcccccgc ccgcacgccg caggaagagg cgcgcgtggc
     2281 gaacccgcac gtcgttcggc acgcagaggc ttccctgggg caccagttcg ggaaggtcgc
     2341 gaatggcgcg atgcgaacag
//
LOCUS       DATGWW010000595         2133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_387076, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000595 DATGWW010000000
VERSION     DATGWW010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387076"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="VK150_08645"
     CDS             complement(<1..236)
                     /locus_tag="VK150_08645"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HLP31416.1"
                     /translation="MPAADTLLAFFGLSLLLALAPGPDNLFVLVQSALRGPRAGMLVV
                     LGLCTGLLVHTGAVALGLAALLAASPFPFKVIKF"
     gene            330..488
                     /locus_tag="VK150_08650"
     CDS             330..488
                     /locus_tag="VK150_08650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31417.1"
                     /translation="MRIVGVVLVLALGLAACDRPPLPKTGETVQGKEQVPPVTTGGQP
                     PSEHAQGR"
     gene            complement(518..1918)
                     /gene="mltF"
                     /locus_tag="VK150_08655"
     CDS             complement(518..1918)
                     /gene="mltF"
                     /locus_tag="VK150_08655"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF008112.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008933 - lytic transglycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0000270 - peptidoglycan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltF"
                     /protein_id="HLP31418.1"
                     /translation="MRKRKRIAIGLMLVPFLQACSQADTQLERVLQKGELRIITRNAA
                     TTYYEGPEGPRGIEYELAQGFAESLGVKLKVVPAANVADVLHRLGEGDGDLAAAGLTD
                     TPAREVEFRFTPPYQTITQQVVYRVGSRRPATPADLKGKMEVVSDSSHAERLKALRGS
                     YPSLAWDENGSVDSEELLALVWDRVVDYTVADSNELALNQRFYPELRVAFDISDAQPL
                     AWAFRKESDDSLYLAAVDYFQRIEEDGTLSRLVERNYGHVENFDYVGSRTFQRHVEAR
                     LPSYQPFFQRAAMDNDLDWRLLAAMAYQESQWDPKAISPTGVKGMMMLTSLTASDLGV
                     DRRTDVDQSIDGGARYLKDLLTRLPGRIDYPDRLWFALAAYNVGLGHLEDARVLTEMR
                     GGNPDLWKDVKESLPLLSKRTWYLRTRYGYARGNEPVKYVENIRSYYDILLWSTDQSR
                     PVPRTDSRFSFMGIQL"
     gene            2030..2122
                     /locus_tag="VK150_08660"
     tRNA            2030..2122
                     /locus_tag="VK150_08660"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2065..2067,aa:Ser,seq:cga)
BASE COUNT          363 a          639 c          763 g          368 t
ORIGIN      
        1 cagaacttga tcaccttgaa ggggaacggg gaagccgcga gcagcgccgc caggccgagg
       61 gccacggcgc cggtgtggac cagcaggccc gtgcagaggc cgagcaccac cagcatgccg
      121 gcgcggggac cgcgcagggc cgactggacc agcacgaaga ggttgtcggg gcccggggcg
      181 agggccagga gcagggagag gccgaagaag gcgagcaggg tatcggcagc gggcatgggg
      241 gggcaaccaa tggagtggcc cgagcatatc aggcctgcgc gtctgcggtg atccggtctt
      301 aactcaaggg agtggaggag ggtgctgcca tgcgtatcgt gggagtggtg ctggtcctgg
      361 cgctggggct cgcggcgtgt gatcggccac cgttgccgaa gacgggagag acggtgcagg
      421 ggaaggagca ggtgccgccc gtgaccaccg gggggcagcc gccatcggag catgcccagg
      481 gccggtaaaa acttgggggc cgaagccccc gtatttctta cagctggatc cccatgaagg
      541 agaaccgcga gtcggtccgc ggcacgggcc gcgactggtc ggtgctccag agcaggatgt
      601 cgtagtagct gcggatgttc tccacgtact ttaccggctc gttgccgcgg gcgtagccgt
      661 agcgggtgcg caggtaccag gtgcgcttgc tgagcagcgg caggctctcc ttcacgtcct
      721 tccagaggtc cggattgccg ccgcgcattt ccgtcagcac gcgggcgtct tccaggtggc
      781 ccaggcccac gttgtaggcg gcgagggcga accagaggcg gtccgggtag tcgatgcgtc
      841 cgggcagccg cgtcagcagg tccttcaggt agcgggcgcc gccgtcgatg ctttggtcca
      901 cgtcggtgcg ccgatcgacc ccgaggtccg aagcggtgag gctggtgagc atcatcatgc
      961 ccttcacgcc cgtgggcgag atggccttcg ggtcccactg ggactcctgg taggccatgg
     1021 ccgccagcag gcgccagtcc aggtcgttgt ccatggcggc ccgctggaag aagggctggt
     1081 aggaggggag gcgcgcctcc acgtggcgct ggaaggtccg cgaacccacg tagtcgaagt
     1141 tctccacgtg gccgtagttg cgctccacca ggcggctcag ggtgccgtcc tcctcaatgc
     1201 gctggaaata gtccacggcg gccaggtaga ggctgtcgtc cgattccttg cggaaggccc
     1261 aggccagggg ctgggcgtcg gagatgtcga aggcgacccg cagctcgggg tagaagcgct
     1321 gattgagggc cagttcattg gagtcggcga cggtgtagtc gaccacccga tcccagacca
     1381 gggccagcag ctcttcgctg tccacggagc cgttctcgtc ccaggccagg gagggatagc
     1441 tgccgcggag ggccttcagc cgttcggcat gggaactgtc gctcaccacc tccatcttgc
     1501 ccttgaggtc ggcgggagtg gccgggcggc ggctgcccac gcgataaacg acctgctgag
     1561 tgatggtctg gtagggtggg gtgaagcgga actccacctc ccgcgccggg gtgtcggtga
     1621 ggccggcggc cgccagatca ccgtcgcctt cacccagacg gtggaggacg tcggccacgt
     1681 tggcggcagg aacgaccttg agcttcaccc ccagggattc tgcaaacccc tgagccagct
     1741 catattcaat accgcggggg ccctccgggc cctcgtagta ggtggtcgcc gcattgcggg
     1801 tgataatgcg tagctcgccc ttctgcagca cccgttcaag ctgggtgtcg gcctggctac
     1861 aggcctgcag gaaagggacc agcatcaggc cgatggcgat tcgtttccgt tttcgcatgg
     1921 gtccgtgcat gtgtaataag gtcctctaat atagcatcaa tcgtttcttt tctcgaactc
     1981 gttctcttgt ttaggacaga acaggccggt atgctatgcg gcttccctcg gagaggtacc
     2041 gaagcggtca taacgggccc gattcgaaat cgggttgggg cttcaccgcc ccacgtgggt
     2101 tcgaatccca ccctctccgc caaatcaatg act
//
LOCUS       DATGWW010000596         1809 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_361638, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000596 DATGWW010000000
VERSION     DATGWW010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1809
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361638"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..510
                     /locus_tag="VK150_08665"
     CDS             <1..510
                     /locus_tag="VK150_08665"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HLP31419.1"
                     /translation="PKGATYADMEAGMAQGKIAMMISGPWAWDNLKKAKVNFGVAKIP
                     SVGGKAASPFVGYLGAMITKAASGAGNVDIAREFIENHMLSLKGLETMNADVAIGTPA
                     SKAAFAKMKSDPFIQVSMASAKDGVVMPNNPQMGRFWAAMVSALNNMTEGRQTPKEAL
                     DAAAKRILK"
     gene            584..>1809
                     /gene="malF"
                     /locus_tag="VK150_08670"
     CDS             584..>1809
                     /gene="malF"
                     /locus_tag="VK150_08670"
                     /EC_number="7.5.2.1"
                     /inference="COORDINATES: protein motif:HMM:NF008232.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalF"
                     /protein_id="HLP31420.1"
                     /translation="MSMPKALKRFLQPALMVLLGLVGLYVITAIYATGESLLAGVMLV
                     TLACFIWIYTSPKPYAYRYLFPGIGAALIFVVFPMLYTVRIGFTNYSSANLLTFKRAT
                     QYLLEETYRAEGATYNSTLHAEGNHWRLRLEDAETGAAFVAGPVVLGHEKPTTLKAEP
                     ITAPVPGDEMPMRDLIDHQAALKALTVLMPDGGQIRMTGLREFAPSRPQFTHNPDGSL
                     TNNQDHSVIKPNFKTGFYETADGEKVNPGFQVDIGWKHYVEIFTDASLREPFWQIFIW
                     TLIFSALTVVFCTALGMVLAVILNWDSLRFRSVYRLLLFLPYAIPGFISILVFKGLFN
                     NNTGEINLVLGTLFGLKPTWFSDPFLAKTMILIVNTWLGFPYMMVVCMGLIKAIPQDL
                     YEASAVAGAGPLTNFF"
BASE COUNT          315 a          634 c          546 g          314 t
ORIGIN      
        1 cccaagggcg ccacctacgc cgacatggaa gcggggatgg cgcagggcaa gatcgcgatg
       61 atgatcagcg gcccctgggc ctgggacaac ctcaagaagg ccaaggtgaa cttcggcgtc
      121 gccaagatcc ccagcgtcgg cggcaaggcc gcgtcgcctt tcgtgggcta cctgggcgcc
      181 atgatcacca aggccgcctc cggcgcgggc aacgtcgaca tcgcccgcga gttcatcgag
      241 aaccacatgc tgagcctgaa gggcctcgag accatgaacg ccgacgtggc catcggcacg
      301 cccgccagca aggccgcctt cgccaagatg aagtccgacc cgttcatcca ggtctcgatg
      361 gccagcgcca aggacggcgt ggtcatgccc aacaaccctc agatgggccg gttctgggcc
      421 gccatggtgt cggcgctcaa caacatgacc gaaggccgtc agacgcccaa ggaagccctg
      481 gacgccgccg ccaagcggat cctgaagtag cttgcgttcc ccgcgcgggg cgggcctccg
      541 ggccggctcc gcgcgggttc cccttctctg gttcggattc cccatgagca tgcccaaggc
      601 cctcaagcgc ttcctccagc ccgccctgat ggtgctcctg gggctggtcg ggctctatgt
      661 catcaccgcc atctatgcca cgggggagag cctgctggcc ggcgtgatgc tggtgaccct
      721 ggcctgcttc atctggatct acacctcccc gaagccctac gcctaccgct acctcttccc
      781 gggcatcggg gcggcgttga tcttcgtggt gttccccatg ctctacacgg tgcgcatcgg
      841 gttcaccaac tacagctcgg ccaacctcct gaccttcaag cgcgccaccc agtacctcct
      901 cgaggagacc taccgggccg agggcgccac gtacaactcg acgctgcacg ccgagggcaa
      961 ccactggcgc ctgcgcctgg aggatgccga gaccggcgcg gccttcgtgg cggggcccgt
     1021 ggtcctgggc cacgagaagc ccaccaccct taaggccgaa cccatcacgg cgccggttcc
     1081 gggcgacgag atgcccatgc gggacctcat cgaccaccag gccgcgctga aggccctgac
     1141 ggtgctgatg ccggacggcg ggcagatccg catgaccggg ctgcgggagt tcgcgccgtc
     1201 gcggccccag ttcacgcaca atccggacgg cagcctcacg aacaaccagg accacagcgt
     1261 catcaagccc aacttcaaga cggggttcta cgagacggcg gacggggaga aggtgaaccc
     1321 cggcttccag gtggacatcg gctggaagca ctacgtggag atcttcacgg acgcctccct
     1381 gcgcgaacct ttctggcaga tcttcatctg gaccctcatc ttctccgccc tgacagtggt
     1441 gttctgcacg gccctgggaa tggtgctcgc ggtgatcctg aactgggatt cgctgcggtt
     1501 ccgctcggtg taccgcctgc tgctcttcct gccctacgcg atcccggggt tcatctccat
     1561 cctggtgttc aaggggctct tcaacaacaa caccggggag atcaacctgg tgctgggcac
     1621 cctcttcggg ttgaagccca cctggttctc ggatcccttc ctcgccaaga cgatgattct
     1681 catcgtcaac acctggctgg gatttcccta catgatggtg gtctgcatgg ggctcatcaa
     1741 ggcgattccc caggatctct acgaagcctc cgccgtggct ggggccgggc ccctcaccaa
     1801 cttcttcag
//
LOCUS       DATGWW010000597         1985 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_120762, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000597 DATGWW010000000
VERSION     DATGWW010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1985
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120762"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1288)
                     /locus_tag="VK150_08675"
     CDS             complement(<1..1288)
                     /locus_tag="VK150_08675"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family metallopeptidase"
                     /protein_id="HLP31421.1"
                     /translation="MNLLTRAEATGYEETSRHADVMAFIADLKAKADPRLHVTSFGIS
                     PEGRELPLLVLSAHGVKTPAEARSLDRPVVLVISGIHAGEVEGKEGCLMLVRDLLEGR
                     SGLDAGAILADLTLVVVPLFNPDGNDAIHPGNRKLHLPKLSGQLGPESGVGTRVNAAK
                     INLNRDYLRMQGEEMRLLQTRVCQPWAPDLTIDNHATNGSVHRFSMTYDIPHTVDSGR
                     EEPIAYMRDRLLPPVTAAMKANHGLDTGWYGNFVEDERALDADRDAEPGAPVREGWMT
                     YPHHPRFGSNYRGLTSRMDLLLECYSYIPFSERVRTAYAFMLETLRHVAAHRDEVLQT
                     VAESLSPRDRIAVRYQLIRRESPIEVLTRTPRTLEGAPTSVTIPHLARFVGTTVAERP
                     EAYLVPASVAAHLRLHGLSLQAAVGTFEVEVPVVEDL"
     gene            complement(1298..1729)
                     /locus_tag="VK150_08680"
     CDS             complement(1298..1729)
                     /locus_tag="VK150_08680"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HLP31422.1"
                     /translation="MFEKTLFAGWGDMDFNAHMRNTAYLDKAGDVRMLFFAEHGFPMS
                     EFVRLRIGPVVKRDEVDYFREIGLLEAFRVRLALAGQSADGSRFLLRNDFLKEDGRPA
                     ARVASLGGWLDLAARRLTPPPASLLEAMRALPRTEDFLELD"
     gene            complement(1795..>1985)
                     /locus_tag="VK150_08685"
     CDS             complement(1795..>1985)
                     /locus_tag="VK150_08685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31423.1"
                     /translation="PRQMMLLQLVAKHPDVARDHLVKAGAAEADISYLVRHDLIRERG
                     VGQYRVSHMGQQVLKRGL"
BASE COUNT          283 a          646 c          751 g          305 t
ORIGIN      
        1 ccaggtcctc caccaccgga acttccacct cgaaggtgcc cacggccgcc tggagggaaa
       61 gcccgtgcag gcgcaggtgg gccgccacgg aggcgggcac caggtaggcc tcggggcgct
      121 ccgccaccgt ggtgcccacg aagcgggcca ggtgggggat ggtcacgctg gtgggcgcgc
      181 cctcgagggt gcggggcgtg cgggtgagga cctcgatggg cgattcgcgg cggatcagct
      241 ggtagcgcac ggcgatgcgg tcgcggggcg acaggctctc ggccacggtc tgcagcacct
      301 cgtcgcggtg ggcggccacg tgccggaggg tctccagcat gaaggcgtag gcggtccgca
      361 cccgctcgga gaaggggatg tacgagtagc actcgaggag caggtccatg cggctggtga
      421 ggccgcggta gttgctgccg aagcggggat ggtgcgggta ggtcatccag ccttcgcgca
      481 ccggcgcgcc gggctcggcg tcgcggtcgg cgtccagggc ccgctcgtcc tccacgaagt
      541 tgccgtacca gcccgtgtcc aggccgtgat tggccttcat ggccgcggta accgggggca
      601 ggaggcggtc gcgcatgtag gcgatgggct cctcccggcc gctgtccacg gtgtggggga
      661 tgtcgtaggt catggagaac cggtgcaccg agccgttggt ggcgtggttg tcgatggtga
      721 ggtcgggggc ccagggctgg cagacgcggg tctgcagcag gcgcatctcc tcgccctgca
      781 tgcgcaggta gtcgcggttc aggttgatct tggcggcgtt cacgcgggtg cccacgccgc
      841 tttcggggcc cagctggccg ctgagcttgg gcaggtgcag cttgcggttg ccgggatgga
      901 tggcgtcgtt gccgtcgggg ttgaagagcg gcaccaccac cagggtgagg tccgccagga
      961 tggcgccggc gtccaggccg gaacgtccct ccagcaggtc gcgcaccagc atgaggcagc
     1021 cttccttgcc ttcgacttcc cccgcgtgga tgccgctgat gaccagcacc acgggccggt
     1081 cgaggctgcg ggcctcggcg ggcgtcttca ccccgtgggc cgacagcacc agcaggggca
     1141 gctcgcggcc ctcggggctg atcccgaagg aggtgacgtg caggcgcggg tcggccttgg
     1201 ccttcaggtc cgcgatgaac gccatcacgt cggcgtgccg gctggtctct tcgtagcctg
     1261 tggcttcagc ccgggtgagc aggttcatgg cctctcctca atccagttcc agaaaatcct
     1321 cggtgcgggg cagggcgcgc atggcctcca gcagggaggc cggcggcggc gtgagcctgc
     1381 gggccgcgag atccagccac ccgcccaggc tcgccacgcg ggcggcgggc cggccgtcct
     1441 ccttgaggaa gtcattgcgc agcaggaagc ggctgccgtc cgccgactgg ccggccaggg
     1501 cgagccgcac ccggaaagcc tccagcaggc cgatctcccg gaagtagtcc acctcgtcgc
     1561 gcttcaccac gggcccgatg cgcaagcgga caaactcgga catcgggaac ccgtgttcgg
     1621 cgaagaagag catgcgcacg tcgccggcct tgtcgaggta ggcggtgttc cgcatgtgcg
     1681 cgttgaagtc catgtccccc cagccggcga acagggtctt ctcgaacatg ggctctcctg
     1741 ggcaggtcat gggcgaaccg aagggtagca gggacgcgcc gccgggaacc tggctcacag
     1801 gccccgcttc agcacctgct gacccatgtg ggagacgcgg tactggccga cgccgcgctc
     1861 gcggatcagg tcgtggcgca ccaggtacga gatatcagcc tcggcggcgc cggccttcac
     1921 caggtggtcc cgggccacgt ccgggtgttt cgccaccagc tgcagcagca tcatctggcg
     1981 ggggg
//
LOCUS       DATGWW010000598         3632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_387203, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000598 DATGWW010000000
VERSION     DATGWW010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3632
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387203"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(181..666)
                     /locus_tag="VK150_08690"
     CDS             complement(181..666)
                     /locus_tag="VK150_08690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31424.1"
                     /translation="MKLSRKAKRYDDSVLPGEFQGFETFHQTDVELDGTLEGFLRRAE
                     GGVQLGEMVLERHSPTKLSFAKLKTKAEKLTEQVNYLKERLEIVDHDRRGMYIQLRSL
                     PPYKDDTQIQFNEISIGKNKIVVKRIAFYRKDEVKQQVPLQLSELELKRLLSDIRQAI
                     A"
     gene            complement(861..1841)
                     /locus_tag="VK150_08695"
     CDS             complement(861..1841)
                     /locus_tag="VK150_08695"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HLP31425.1"
                     /translation="MSDQPLIRSLKEGDTFQGFLLAQEAAYKVSAKGSEYLEVKLADA
                     SGDLKGFLWDVRAVEGDLDAVQADAFLRVKGSVTSYNGRLQIKLDKVRYATDAEVGDL
                     SAFFPVSARPVPEMLAELDAFITSVKDAWIRRLLHDLFVADEALRAAFALAPAAKSMH
                     HAHLGGLLEHTLSVLGMAERACGHYPELNRDLVVAGVFLHDVGKTAELSYQRSFGYTD
                     AGNLLGHIALEADWISRAVGKIPGFPEELRMQILHIVLSHHGRLEFGSPVLPKTPEAL
                     LVHYLDDLDGKLEAMFRAVKDESGSGSWSPYSRSLDRMIYRNRWPRCETV"
     gene            complement(1894..2217)
                     /locus_tag="VK150_08700"
     CDS             complement(1894..2217)
                     /locus_tag="VK150_08700"
                     /inference="COORDINATES: protein motif:HMM:NF013633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HLP31426.1"
                     /translation="MRLDAFLRKSLLIKRRELANQLCDEGMVRVNGVPRKASQDVKAQ
                     DELEFPLYNRVLKVRVLALPEGNVKKADQWSLFEVLEDKRIPLELGYGDEDPFAPPPK
                     PPRNH"
     gene            complement(2222..3214)
                     /locus_tag="VK150_08705"
     CDS             complement(2222..3214)
                     /locus_tag="VK150_08705"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HLP31427.1"
                     /translation="MKLLAPALLLLLAAPALVAETKPDVREEILVVVNQHIITRRGLN
                     QAVEQQHAALYRQFSGKELDAKLVDAREKTLQGLVDAFLLEDKGAELGSPITDEYIRA
                     TLDGIKKENNFATDADLERAVKGSLGIGLPEFMKRQKQQATQQFVLQREVFSKVAVED
                     NELRAYYEDHKDEYRMPSRFRIRELVLAKGATAEDQAEARKKLEAIQAELKAGKSFEE
                     LARLHSTSPSKATGGDLGWMNKGFLRASIEDAAVKLKADQVSAPIETDKDLYLIQLIA
                     LEDAPVKSFAEVKAKILEKLQEPKAQNAMEQYLAGLRMRANIRYLVPKEQILKG"
     gene            complement(3211..>3632)
                     /locus_tag="VK150_08710"
     CDS             complement(3211..>3632)
                     /locus_tag="VK150_08710"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HLP31428.1"
                     /translation="GLYADADPAGWVPEFGAAARTQALGEVGAPVKTQYGYHLVKVEG
                     RKAARQLTFEEAKTSVERLAQQERQVAIWNELMDDLRKEIPFELVKPAAPKTAPMPIV
                     APVTAPPATEPAQAPDVKAPEAKAPDTKAPDTKGGAQ"
BASE COUNT          559 a         1176 c         1202 g          695 t
ORIGIN      
        1 cccgccggtg gcgcgttcgg agtcgggccc cggcgaggcg tttatgccac ccacgcagga
       61 agccgccatt cggcggcttc cgtcaagatg gccggccctc aggcggggca agttcattcc
      121 tcacgaagaa agggcaccgc aaggcaccct ttctttgcct aaatcaaagc aaataaagct
      181 ctaagcaatc gcctgtcgaa tatcggacag gaggcgcttg agttccagct ccgacagctg
      241 caggggcacc tgctgcttga cctcgtcctt gcggtagaag gcaatgcgct tcaccacgat
      301 cttgttcttg ccgatgctga tctcgttgaa ctggatctgg gtgtcgtcct tgtagggcgg
      361 caggctgcgc agctggatgt acatcccgcg ccggtcgtgg tccacgatct cgaggcgctc
      421 cttcaggtag ttcacctgct cggtaagctt ctcggccttg gtcttgagct tggcgaagct
      481 cagcttcgtg gggctgtgcc gttccagcac catctcgccc agttgcacgc ccccctccgc
      541 acggcggagg aagccctcca gggtgccgtc cagctccaca tccgtctgat ggaaggtttc
      601 aaacccctgg aattcgccgg ggaggacgga gtcgtcatag cgcttggctt tgcgggacag
      661 cttcatggaa cacctcggca gggtcaggaa gctctaagag ccagacccgt gccaggaatt
      721 ttcttcctcg accgaagggg ggagtcgctg acatgtcagc acttccgtac atcatctgcc
      781 cagcgggacc tgcccagggc taggtgttat tgggtagatt gtgtccatat ccgatcaggc
      841 aagaaaagat ctgttcagtt ttagacagtc tcgcaccggg gccagcgatt gcggtagatc
      901 atgcgatcca gggatcggct atagggactc caggatccgc tgcccgactc atccttcacc
      961 gcccggaaca tggcctccag ttttccgtcc aggtcgtcca ggtagtggac caggagggcc
     1021 tccggcgtct tggggagaac gggggaaccg aactccaggc ggccgtgatg gctgagcacg
     1081 atgtgcagga tctgcatccg aagctcctcc gggaacccgg ggatcttgcc caccgcccgg
     1141 ctgatccagt cggcctccag cgcgatgtgc ccaagcaggt tgcccgcgtc cgtgtagccg
     1201 aagctccgct ggtagctcag ctccgcggtc ttgcccacgt cgtggaggaa gacgcccgcc
     1261 accaccaggt cgcggttcag ctctggatag tggccacagg cgcgctcggc catgcccagc
     1321 accgaaaggg tgtgctccag cagcccgccc aggtgggcgt ggtgcatgga tttggcggcc
     1381 ggcgccaggg cgaaggcggc gcggagggcc tcgtcggcca cgaacagatc gtggaggagg
     1441 cggcggatcc aggcatcctt caccgacgtg atgaaagcat ccagctccgc cagcatctcc
     1501 ggcacgggcc tggcgctcac cgggaagaag gcggagaggt cgcccacctc cgcgtcggtg
     1561 gcgtagcgga ccttgtccag cttgatctgg aggcggccgt tgtagctcgt cacggagccc
     1621 ttcacgcgga ggaacgcgtc cgcctgcacg gcgtccagat cgccttcgac ggcccggaca
     1681 tcccagagaa agcccttcag gtcgccagaa gcgtccgcca gcttcacttc caggtactcg
     1741 ctgcccttgg cgctcacctt gtaggccgcc tcctgggcaa ggaggaagcc ctggaaggtg
     1801 tcgccctcct tcaagctgcg gatgaggggc tggtcggaca tcacggctcc atgcgtcccg
     1861 ccaggatgat cccgaggagg cgacagcagt tgtctagtgg ttgcggggcg gcttgggcgg
     1921 cggcgcgaag gggtcctcgt cgccgtagcc cagttccagg gggatgcgct tgtcctccag
     1981 gacctcgaag agcgaccact ggtccgcctt cttcacgttg ccttcgggca gggcgagcac
     2041 ccggaccttc agcacccggt tgtagagcgg gaattccagc tcgtcttggg ccttcacgtc
     2101 ctggctggcc ttccggggca cgccgttcac ccgcaccatc ccctcgtcgc agagctggtt
     2161 ggccagctcc cgccgcttga tgagcaggct cttccgcagg aaggcgtcga ggcgcacggc
     2221 actacccctt caggatctgt tctttcggga ccaggtagcg gatgttggcg cgcatccgga
     2281 ggccggccag gtactgctcc atggcgttct gggccttggg ctcctggagc ttctccagga
     2341 tcttggcctt cacctccgcg aaggacttca ccggggcgtc ctccagcgcg atgagctgga
     2401 tcaggtagag gtccttgtcc gtttcgatgg gcgcggaaac ctggtcggcc ttgagcttca
     2461 cggccgcatc ctcgatgctg gcccgcagga agcccttgtt catccagccc aagtccccgc
     2521 cggtggcctt gctggggctg gtggagtgca ggcgggccag ttcctcgaag gacttgccgg
     2581 ccttcagctc ggcctggatg gcctccagct tcttccgggc ctccgcctga tcctcggcgg
     2641 tggcgccctt ggccagcacc agctcgcgga tgcggaaccg gctgggcatg cggtactcgt
     2701 ccttgtgatc ctcgtagtag gcgcggagct cgttgtcctc cacggccacc ttcgagaaca
     2761 cctcgcgctg caggacgaac tgctgggtgg cctgctgctt ctggcgcttc atgaattcgg
     2821 ggaggccgat gccgaggctg cccttcacgg cccgctcgag gtccgcatcg gtggcgaagt
     2881 tgttctcctt cttgatgcca tccagggtgg cgcggatgta ctcgtcggtg atgggtgagc
     2941 ccagctcggc gcccttgtct tccagaagga aggcgtccac caggccttgc agggtcttct
     3001 cccgggcatc caccagcttc gcgtccagct ccttgccgga gaactggcgg tagagcgcgg
     3061 cgtgctgctg ctccacggcc tggttcaggc cgcgtcgggt gatgatgtgc tggttcacga
     3121 cgacgaggat ctcctcgcgg acatcgggct tggtctcagc caccagggcc ggggcggcga
     3181 ggaggagcag gagcgcgggg gccagcagct tcactgggca cctcccttcg tatcgggggc
     3241 cttcgtgtca ggggccttcg cttcaggagc cttgacgtcc ggggcctggg cgggctccgt
     3301 ggcaggcggc gccgtcacgg gcgccacgat gggcataggc gcggtcttcg gcgcggcggg
     3361 cttcaccagc tcgaagggaa tctccttgcg caggtcgtcc atgagctcgt tccagatggc
     3421 cacctgccgc tcctgctggg ccaggcgctc gacggaggtc ttggcttcct cgaaggtgag
     3481 ctggcgagcg gccttgcgcc cctccacctt cacaaggtgg tagccgtact gggtcttcac
     3541 gggagcgccc acctcgccca gggcctgggt gcgggcggcg gccccgaact cgggcaccca
     3601 gcccgcggga tcggcgtccg cgtagaggcc gc
//
LOCUS       DATGWW010000599         1937 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_202949, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000599 DATGWW010000000
VERSION     DATGWW010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202949"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..452
                     /locus_tag="VK150_08715"
     CDS             153..452
                     /locus_tag="VK150_08715"
                     /inference="COORDINATES: protein motif:HMM:NF012365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit C"
                     /protein_id="HLP31429.1"
                     /translation="MKKFLTTAFLFTLAAVAFAQGAPAVAQKSLFEGQFVAHLSLAIA
                     AAGCGLAQGKAVVAACEGVARNPQAAGNIRTTMIIGLALIEALVIYVLVAAFAIK"
     gene            541..1710
                     /locus_tag="VK150_08720"
     CDS             541..1710
                     /locus_tag="VK150_08720"
                     /inference="COORDINATES: protein motif:HMM:TIGR04552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04552 family protein"
                     /protein_id="HLP31430.1"
                     /translation="MTSHAMFPLPPEVTQVILGGGSPIDLDSLRIHSPGEARNFALNY
                     GYDMDIPVQRAAVLRVYEDAVDFLEAVVLEGTDLHVPFEVRDLQDPLDLLIWASERPR
                     NQRCRWACAVLRVMHTLFHVDHNVNLRFLPEIQRQVFSRYDQYLVCEEGRWLLRGAYE
                     VPLVAVERKENKDRVSMLLKMLHKPENVAETIYDQIGIRLVAEDQLGVLMVIRFLLDH
                     HVLMPTHIKPSRSRNLMIDMEALAAWSETMPPSFRIQDLDPEARKTLSHTLAIKAPGK
                     DQNPFSSKDYSAIQFTARTLVRLPSPATKALETLQERLQTMGDTELSDLVRIPELIQD
                     QEEFTFFFAHEVQVMEQSGFQSSRSGPASHTEYKQRQRDAARRRVLQGILQEEPC"
     gene            1704..>1937
                     /locus_tag="VK150_08725"
     CDS             1704..>1937
                     /locus_tag="VK150_08725"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HLP31431.1"
                     /translation="MLNIQTRQEGTASVVSIQGKVNFEVTAQLRDVIRETVATAQPKL
                     LVINLEGVSFIDSSGLGLLVAARNSVDKSGGKLH"
BASE COUNT          346 a          666 c          580 g          345 t
ORIGIN      
        1 caggcccccc gggacccccc gatgcgagtc tcaggcggag cctgatcccc gcatccgccc
       61 ctccgggcaa ggccattcat cgtttccagt ttgttttccc ttcaccgtcc ccgggattcc
      121 gaaccccaag gacacctttt aggagcagtc ccatgaagaa gttcctcacc accgctttcc
      181 tgttcaccct ggccgccgtc gcgttcgcgc agggcgcccc cgccgtcgcc cagaagagcc
      241 tcttcgaagg ccagttcgtg gcccacctct ccctcgccat cgcggccgcc ggctgcggtc
      301 tggcccaggg caaggccgtg gtcgccgcct gcgagggcgt ggcccgcaac ccccaggccg
      361 ccggtaacat ccgcaccacc atgatcatcg gtctggccct catcgaggcc ctcgtgatct
      421 acgtgcttgt cgccgctttc gccatcaagt aggcgaaacg ggttccagcg gggcgtccag
      481 gtcttgggcg ccccgttttt ttatgattcc tggaaagagc cgatatagat gtttgacgcc
      541 atgacctccc acgcgatgtt ccccctgccc cccgaagtca cccaggtgat cctggggggt
      601 ggttcaccca tcgacctgga ttccctgcgg atccactcgc cgggggaggc ccggaatttc
      661 gcgctcaact acggctatga catggacatc cccgtgcagc gcgcggcggt gctgcgggtc
      721 tacgaggacg cggtggactt cctcgaggcg gtggtgctgg agggcacgga cttgcacgtg
      781 cccttcgaag tgcgcgacct ccaggacccc ctcgacctcc tgatttgggc ctcggagcgg
      841 ccgcggaacc agcggtgccg gtgggcctgc gccgtgctgc gggtgatgca caccctcttc
      901 cacgtggacc acaacgtgaa cctgcggttc ctgccggaga tccagcgtca ggtcttcagc
      961 cgctacgacc agtacctggt ctgcgaggag ggccgctggc tgctccgggg ggcctacgag
     1021 gtgcccctgg tggccgtgga gcgcaaggag aacaaggacc gcgtgtccat gctcctgaag
     1081 atgctccaca agcccgagaa cgtggcggag accatctacg accagatcgg catccggctg
     1141 gtggccgagg accagctggg tgtgctcatg gtcatccgct tcctcctgga ccaccacgtg
     1201 ctcatgccca cccacatcaa gcccagccgc tccaggaacc tgatgatcga catggaggcg
     1261 ctggcggcct ggagcgaaac catgcccccc tccttccgga tccaggacct ggacccggag
     1321 gcgcggaaga ccctgagcca caccctggcg atcaaggccc cgggcaagga tcagaacccc
     1381 ttttccagca aggattactc cgccattcag ttcacggccc gcaccctggt gcgcctcccg
     1441 agccctgcca ccaaggccct ggagaccctc caggagcggc tccagaccat gggggatacg
     1501 gaactgtcag acctcgtccg cattccagag ttgatccagg atcaggagga gtttactttc
     1561 ttcttcgcac atgaagtcca agtgatggaa caatcggggt ttcaaagctc acgatcgggt
     1621 cctgcatccc atacggaata caaacagcgc cagcgggatg ccgcccggcg gagagtgctt
     1681 cagggaatcc ttcaggagga accatgctga atatccagac ccgccaagaa ggcaccgcct
     1741 cggtggtgtc catccaaggc aaggtcaatt tcgaagtgac cgcccagctg cgcgacgtga
     1801 tccgcgagac ggtggccacg gctcagccga agctcctggt gatcaacctg gagggcgtca
     1861 gcttcattga ttcctcgggt ctgggattgc tggtggccgc ccgcaacagc gtggacaagt
     1921 ccggcggcaa gctgcac
//
LOCUS       DATGWW010000600         2567 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_388063, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000600 DATGWW010000000
VERSION     DATGWW010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2567
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_388063"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1419)
                     /locus_tag="VK150_08730"
     CDS             complement(<1..1419)
                     /locus_tag="VK150_08730"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HLP31432.1"
                     /translation="MQPEQFQSEVERIKKGGSTKAHEKNAEAGKLFARDRIRLLVDEG
                     SFVEDGLFANALHKDLPADGVITGTATVDGRPVALMANDSTIKAGSWGARTVEKIIRI
                     QEVALRMKVPMLYLVDSAGARITDQLDMFPGRRHAGTIFHMEVALSGLVPQVCLLFGP
                     SAAGGAYIPAFCDVVIMVEGNASMYLGSPRMAEMVIGEKISLEDLGGARMHCSVSGCG
                     DFLCKTEPEAIELCRKYLAYFPQHCEAELPAVAPRGVTPKAKDLGALVPQDIMAPFQM
                     KDFIEGLVDEGSFLEVKKLFAGEIITGLARLDGKPVGILANQPRVKGGVLFVDSADKA
                     TRFIALCDAFGIPLVFLSDVPGFMIGSAVEKQGIIRHGAKMISAMAGCSTPRFCVVVR
                     KAYGAGLYAMSGPGFDPDATLALPTASIAVMGAEAAVNAVFANKIAEKPEGERAAYVQ
                     QLRDEYNQDIDLKKLGADLHVDA"
     gene            1488..>2567
                     /locus_tag="VK150_08735"
     CDS             1488..>2567
                     /locus_tag="VK150_08735"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLP31433.1"
                     /translation="MLDAGGTKRPGYLTGPFLIVCTFYFLVFAAGYQLFPVVPLRLRD
                     LGASLAESGRFQTAFMLGSGFGALFTGPLGDRLGPRRVLRVASLAVVGILVVYALLKV
                     RWVFYLLAPIHGLLWSALRTASIAKVGGILAMEHRAQGLSIFGLTGPGGVAVGPLVGL
                     WLMPHLGFTWMLVLLAGVFVALHLLIAALPREAPREIEGTVFQWPDRAIWGPVAVMML
                     VGLSFGPMPPYSAQEAKALGLAWPSAFLTCFALGMMAIRGLLALTGMGRRPVALLPAM
                     AALTAFGYGLLAFLPGGLGRHLVSGLVYGGGYGMVHTLTLTHLMETTPPERRGAAVGA
                     FFFAFDAATALGSLALGWVMEHGGFR"
BASE COUNT          311 a          899 c          908 g          449 t
ORIGIN      
        1 ggcgtccacg tgcaggtcgg cgccgagctt cttcaggtcg atgtcctggt tgtactcgtc
       61 gcggagctgc tgcacgtagg cggcgcgctc gccctcgggc ttctcggcga tcttgttggc
      121 gaagacggcg ttcaccgcgg cctcggcgcc catgacggcg atgctggccg tgggcagggc
      181 cagggtggcg tcggggtcga agccgggccc gctcatggcg tagaggcccg ccccgtaggc
      241 cttgcgcacc accacgcaga agcgcggcgt gctgcagccg gccatggcgc tgatcatctt
      301 cgcgccgtgg cggatgatgc cctgcttctc cacggcgctg ccgatcatga agccgggcac
      361 gtcgctgagg aatacgagcg ggatgccgaa ggcgtcgcag agggcgatga agcgcgtggc
      421 cttgtcggcg ctgtccacga agagcacgcc gcccttcacc cggggctggt tggccaggat
      481 gcccacgggc ttcccatcca gccgggccag gcccgtgatg atctcccccg cgaagagctt
      541 cttcacttcg aggaagctgc cttcatccac caggccctcg atgaaatcct tcatctggaa
      601 gggggccatg atgtcctgcg gcacgagggc gcccaggtcc ttggccttgg gcgtcacgcc
      661 gcgcggggcg acagcgggaa gctccgcttc gcagtgctgg gggaagtagg ccaggtactt
      721 ccggcacagc tcgatggcct ccggctccgt cttgcagagg aagtcgccgc agccgctcac
      781 ggagcagtgc atgcgggccc cgcccaggtc ctcgaggctg atcttctcgc cgatgaccat
      841 ctcggccatg cggggcgagc ccaggtacat gctggcgttg ccctccacca tgatcaccac
      901 gtcgcagaag gcggggatgt aggcgccgcc cgccgcagag ggtccgaaga gcaggcacac
      961 ctggggcacc aggcccgaca gcgccacctc catgtggaag atggtgccgg cgtggcggcg
     1021 gccggggaac atgtccagct ggtcggtgat gcgggccccg gcgctgtcca ccaggtagag
     1081 catggggacc ttcatccgca gggccacttc ctggatgcgg atgatcttct ccaccgtgcg
     1141 ggcgccccag ctgcccgcct tgatggtgct gtcgttggcc atgagggcca cgggccgacc
     1201 atccaccgtg gccgtgccgg tgatcacgcc gtcggcgggc aggtccttgt gcagggcgtt
     1261 ggcgaagagt ccgtcctcga cgaagctgcc ctcgtccacc agcaggcgga tgcggtcacg
     1321 cgcgaagagc ttgccggcct ccgcgttctt ctcgtgggcc ttcgtcgagc cgcctttctt
     1381 gatgcgctca acttccgact ggaactgctc gggctgcatg ggaacctcgg ggtggatcct
     1441 ccagcatagc ggccccggcg cgggccccgg cgtgcgatcc tggagggatg ctggacgcag
     1501 gcggaacgaa gcggcccggg tacctgacgg ggccctttct catcgtctgc accttctact
     1561 tcctggtgtt tgccgcgggc taccagctgt tcccggtggt gccgctgcgc ctgcgcgacc
     1621 tgggcgccag cctggcggag agcgggcgct tccagacggc cttcatgctg ggctcgggct
     1681 tcggcgcgct cttcaccggc cccctgggcg accggctcgg cccgcgccgc gtgctccgcg
     1741 tggcctccct ggccgtggtg ggcatcctgg tggtctacgc gctgctcaag gtgcgctggg
     1801 tgttctacct gctggcgccg atccatgggc tgctatggtc cgccctgcgg acggcctcca
     1861 tcgccaaggt gggcggcatc ctggccatgg agcaccgggc ccagggcctc tccatcttcg
     1921 gcctcacggg ccccggcggc gtggccgtgg gccccctggt gggcctctgg ctcatgcctc
     1981 acctgggatt cacctggatg ctcgtcctcc tcgcgggcgt cttcgtggcc ttgcacctgc
     2041 tgatcgcggc cctgccccgg gaggcgccgc gggagatcga gggcaccgtg ttccagtggc
     2101 ccgaccgcgc catctggggg cccgtggccg tgatgatgct cgtgggcctg agcttcggcc
     2161 ccatgccgcc ctacagcgcc caggaggcga aagcgctggg cctggcctgg ccctccgcct
     2221 tcctcacctg cttcgccctg ggcatgatgg ccatccgcgg tctgctggcg ctcacgggca
     2281 tgggccggcg ccccgtggcg ctgctgccgg ccatggcggc cctgacggcc ttcggttacg
     2341 ggctgctggc cttcctgccc ggcgggctgg gccggcacct ggtgtcgggc ctggtctacg
     2401 gcggcgggta cggcatggtg cacaccctca ccctcaccca cctcatggag accacgccgc
     2461 cggagcggcg gggcgccgcg gtaggggcct tcttcttcgc cttcgacgcc gccaccgccc
     2521 tggggtcact ggccctgggc tgggtgatgg agcacggcgg cttccgg
//
LOCUS       DATGWW010000601         3005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_158990, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000601 DATGWW010000000
VERSION     DATGWW010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3005
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158990"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..705
                     /locus_tag="VK150_08740"
     CDS             <1..705
                     /locus_tag="VK150_08740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31434.1"
                     /translation="EWFEGHGGNRVYEVQVCVTCHVPGLTTSGKGISDAALETYRAAG
                     LFTAKDTASLAAWGITIPNPVVAGSNFALNFPQTTNNFKDMIHGIHAGKDRTTPIRIV
                     RDRTPGAIAIINGGNIGFPGILSNCKSCHTYNGYNVPTTGKLLASRELADNGAVTTTA
                     AAKASLGTVSATDKMISPFTAACVTCHDSTAAQAHMNLNGGQIKVNRSALNPALESCA
                     VCHGAGSEFDPVKVHQ"
     gene            854..1264
                     /locus_tag="VK150_08745"
     CDS             854..1264
                     /locus_tag="VK150_08745"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HLP31435.1"
                     /translation="MTTRIPNLMPTALLLALGLALPLVAQKAGAQEAATPKPAPAPNA
                     APAKAPEASAKPAAAKAKAKASAVEPRTKGKLKPVDINHADPNEISFMLGIDAALAAK
                     VVANRPYKTKAELVVKNVFTMELYQKLKNRVAAK"
     gene            1434..1928
                     /locus_tag="VK150_08750"
     CDS             1434..1928
                     /locus_tag="VK150_08750"
                     /inference="COORDINATES: protein motif:HMM:NF014173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HLP31436.1"
                     /translation="MLPLSQTTGYAVRALRCLQEPGGHPVLVEEVAEYTGIPRSYLSK
                     LVHKLAKKGLVVARRGHHGGVVLARPSSDITLEDLSEAIDGTAWRKRCLMGLMGCTAD
                     TPCMLHEFWQETLEQILARLRSVTLAELARHHDDPAVERFRASHGFQNPPEPTPAREL
                     AQSN"
     gene            complement(1995..2540)
                     /locus_tag="VK150_08755"
     CDS             complement(1995..2540)
                     /locus_tag="VK150_08755"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HLP31437.1"
                     /translation="MLPLSQSSGYAVLAMSCLEDPGGKPTLVVDVAARTGFPRPYLSK
                     MIHKLAKVGLVMAKRGNKGGVVLALAAKEITLDLIAEAVDGSEWRNQCLLGFKDCSDE
                     RACPSHTFWKAERDHIHRCLKEISLEEIRAFEQQSRTWRLADALPEKKLKPRAKKAAK
                     PAAKKPAVKKAAPARAVAKKA"
     gene            complement(2681..>3005)
                     /locus_tag="VK150_08760"
     CDS             complement(2681..>3005)
                     /locus_tag="VK150_08760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31438.1"
                     /translation="LLLRLRWLAVLHGHLKGSLAVTGGVHDGIGALKAVMAGADAVQM
                     VSALLIHGPERLAQTRASLAEWLEEHEYESLAQARGSMSLLKCPNPQAFTRANYMRIL
                     NGWKP"
BASE COUNT          535 a         1039 c          962 g          469 t
ORIGIN      
        1 gagtggttcg agggccacgg tggcaaccgc gtctacgaag tccaggtctg cgtcacctgc
       61 cacgtccccg gtctcaccac cagcggcaag ggcatttctg acgccgccct cgagacctac
      121 cgcgccgcgg gcctcttcac cgccaaggac accgccagcc tcgccgcctg gggcatcacc
      181 atccccaatc ccgtcgttgc cggctcgaac ttcgcgctga acttccccca gaccacgaac
      241 aacttcaagg acatgatcca cgggatccac gctggcaagg atcgcaccac cccgatccgc
      301 atcgtccgcg accggacccc cggtgccatc gccatcatca acggcggcaa catcggcttc
      361 cccggcatcc tgagcaactg caagagctgc cacacctaca acggctacaa cgtgcccacc
      421 acgggcaagc tgctcgccag ccgcgaactc gccgacaacg gcgcggtcac cacgaccgcc
      481 gctgccaagg cttcgctcgg caccgtcagc gccaccgaca agatgatcag ccccttcacc
      541 gccgcttgcg tcacctgcca tgacagcacc gccgcccagg ctcacatgaa cctgaacggt
      601 ggccagatca aggtcaaccg cagcgccctg aatccggccc tcgaatcctg cgccgtctgc
      661 cacggtgccg gttccgagtt cgatcccgtc aaggtgcacc agtaagatcc agtcccgggg
      721 ggagcgggga gacccgctac cctcacgcac tcacgctgaa tgcaacccgg ctgcctcacc
      781 gcatccgggt tgttgtttgt atgcttctcc cgtgggcccg gcagcatggg ccctggccct
      841 ttccggaggt ttcatgacga cccgaatccc caacctgatg ccgacagccc tcctgctggc
      901 cctgggcctg gcgctgcccc tggtggccca gaaggcgggg gcccaggagg cagcgacccc
      961 caagccggcc ccggccccca atgccgcccc ggcgaaggcc cctgaggcct cagccaagcc
     1021 cgcagcggcc aaggccaagg ccaaggcttc cgccgtggag ccgcgcacca agggcaagct
     1081 caagcccgtg gacatcaacc acgccgaccc gaacgaaatc agcttcatgc tgggcatcga
     1141 cgccgccctc gccgccaagg tggtggccaa ccggccctac aagaccaagg ctgagctggt
     1201 ggtgaagaat gtcttcacca tggagctcta ccagaagctc aagaaccggg tcgccgccaa
     1261 gtaggcgccg cgcaagtccg ccagggggga tgccaatcgg cctcccccct ggtttttttc
     1321 cggcgaaacc ggctggagag tgacgcagat cacaaggctg gttgactcgt tagattaccg
     1381 gaggatcttc attaataaga ccctttagta cagggccttt catggaggtt cccatgctcc
     1441 cactctcgca gaccacaggg tacgcggtgc gggcgctgcg ctgcctccag gagcccggcg
     1501 gccacccggt cctcgtcgag gaggtggccg agtacacggg gattccgcgc tcgtacctct
     1561 ccaagctcgt ccacaagctc gccaagaagg ggctcgtggt ggccaggagg ggccatcacg
     1621 gcggcgtggt gctggcccgc ccctcgtcgg acatcacctt ggaggacctc tccgaagcca
     1681 tcgacgggac ggcttggcgc aagcgctgcc tcatggggct catggggtgc acggccgaca
     1741 cgccttgcat gctccacgag ttctggcagg agaccctgga gcagatcctg gcgcggttgc
     1801 ggtcggtgac cctggctgag ctggcacgcc accatgacga cccggccgtg gagcgcttcc
     1861 gggcgagcca tggcttccag aacccgcccg agccgactcc ggcccgggag ctggcccaga
     1921 gcaactgaac acgcggtaac caagcaaggg gccgcccagg tgggcggccc cttgcttggt
     1981 ggggaaggga accgtcaggc cttcttggcg acggcgcggg ccggcgcggc cttcttgacg
     2041 gctggcttct tcgcggcggg cttggcggcc ttcttggcgc ggggcttgag cttcttctcg
     2101 ggcagggcat ccgccaggcg ccaggtgcgg ctctgctgct cgaaggcgcg gatctcttcg
     2161 agggagatct ccttcaggca gcggtggatg tgatcccgct cggccttcca gaaggtgtgg
     2221 gaggggcagg cgcgctcgtc ggaacagtcc ttgaagccga gcaggcactg gttccgccac
     2281 tcggagccgt ccaccgcctc ggcgatgagg tcgagggtga tctccttggc ggcgagggcg
     2341 aggaccacgc cgcctttgtt gccgcgcttg gccatcacca ggcccacctt ggcgagcttg
     2401 tggatcatct tggacaggta ggggcggggg aagcccgtgc gcgcggcgac atccaccacc
     2461 agagtcggct tgccgcctgg atcctcaagg cagctcatgg ccaagaccgc gtaaccggag
     2521 gactgggaca gagggagcat gggcacctgc gcagaatgat gttggatgaa cggtacaaat
     2581 aatagacgat gtccgggtca aacacaccca aagagtgtga tcactctcac aatgcgcgag
     2641 acccccggct ggccgggggt cccatggcag aaaacgatct tcagggcttc catccattga
     2701 ggatccgcat gtaattagcg cgggtgaagg cctgggggtt ggggcacttc aggaggctca
     2761 tgctgccccg ggcctgggcc agggattcgt actcgtgctc ttccagccac tcggcgaggc
     2821 tggcgcgggt ctgggcaagg cgctcgggcc cgtggatgag gagcgcggag accatctgca
     2881 ccgcgtccgc gccggccatg acggccttca gggcaccgat gccatcatgc acgccgccgg
     2941 tgacggcgag gctgcccttg aggtggccgt ggagcaccgc gagccagcgc aggcggagca
     3001 gcagg
//
LOCUS       DATGWW010000602         1817 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_388488, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000602 DATGWW010000000
VERSION     DATGWW010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_388488"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..619
                     /locus_tag="VK150_08765"
     CDS             <1..619
                     /locus_tag="VK150_08765"
                     /inference="COORDINATES: protein motif:HMM:NF020083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31439.1"
                     /translation="PHDGREHLAIYGFAGRNAQQTLGLLVTKQMESQGLAPLGFVATD
                     YATLIWGLDPVTDPTPLFDLATLREGLDHWLAGNAVMKRTFRSTAIIAGLIERSHQGR
                     RKTGRQATFSSDILYDTLRRYDPDHLLLQITREEALRGLIDFSRIEQLLARVGPRIEL
                     KRLKRVTPIAAPLFFEPSRIPVQGEGRDRLATAQAQALMEAAGLA"
     gene            770..1417
                     /gene="pdeM"
                     /locus_tag="VK150_08770"
     CDS             770..1417
                     /gene="pdeM"
                     /locus_tag="VK150_08770"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR04123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HLP31440.1"
                     /translation="MHHALFFHGQTLHLMPSGALYWPAQKTLTVSDLHLGKSERLARR
                     GGMLLPPYETQATLEKLDRDLEHTRAETVICLGDSFDDLAALDGIEEASRLWLTRLMA
                     GRSWTWITGNHDPGPIDLGGTHRAELKLQPYTFRHIAEPTETAEISGHYHPKASLAGQ
                     TKPCFLADANRLILPAYGVYTGGLRSHAPALTTLMARDALAILTGRKAIPMPMPR"
     gene            1476..>1817
                     /locus_tag="VK150_08775"
     CDS             1476..>1817
                     /locus_tag="VK150_08775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31441.1"
                     /translation="MRPILFAACLAALPTLATADPAADYLRLAAALPDLDPGRDPISY
                     MASAQDLVQGMQGRWLLAPYVMLAEEDGFPPAETLQKHCEMAGMEAAPDGPLGFTLTL
                     PTNGAPFRLRMT"
BASE COUNT          322 a          752 c          473 g          270 t
ORIGIN      
        1 cccccacgac ggccgcgaac atctggccat ctacggcttc gcgggaagga acgcccagca
       61 gactctaggc ctcctagtaa caaaacagat ggaatcccaa ggccttgccc cccttggctt
      121 cgtcgccacc gactacgcca ccctcatctg gggcctcgat cccgtcactg atcccacgcc
      181 cctcttcgat ctggcaaccc tgcgtgaggg cctcgatcac tggcttgccg gcaacgccgt
      241 gatgaagcgc accttccgct ccaccgccat catcgcgggc ctcatcgaac gctcccacca
      301 gggccgccgc aagacggggc gtcaggcgac cttctcctcc gacatcctct acgacaccct
      361 ccgccgctac gaccccgacc acctcctcct gcagatcacc cgcgaggaag ccctccgtgg
      421 cctcatcgac ttctcccgca tcgagcaact cctcgcccgc gtcggccccc gcatcgaact
      481 caagcgcctc aaacgcgtca cccccatcgc cgcacccctc ttcttcgaac ccagccgcat
      541 ccccgtccag ggcgagggcc gcgaccgcct cgccactgcc caggcccagg ccctgatgga
      601 agccgcaggc ctcgcctgac cctttcatac tggcgcaaat atccccgccg gaggcgcccc
      661 tgaggcaagc ggcgcagtcc gcgcagacga ggcaaagact ccgtgcgaag cactcatttc
      721 aacaaccgcc ccttgcctcc gaccccgccg tcgcgccata gaacaaacca tgcaccacgc
      781 gctcttcttc cacggccaga ccctgcacct gatgccctcc ggcgcgctct actggccggc
      841 gcagaagaca ctcaccgtct ccgacctcca cctcggcaag tccgaacgcc tcgcccgccg
      901 cggcggcatg ctccttcccc cgtacgagac acaggcgacg ctggagaaac tcgaccgcga
      961 tctcgaacat acaagggccg agaccgtgat ctgccttggc gacagcttcg atgacctcgc
     1021 cgcgctggac gggatcgagg aggcctcccg cctctggctc acccgcctca tggccgggag
     1081 aagctggacc tggatcaccg gcaaccacga ccccggcccc atcgacctcg gcggcacgca
     1141 ccgggccgag ctcaagctcc aaccctacac cttccgccac atcgccgaac cgaccgagac
     1201 cgccgaaatc tccggccact accaccccaa agccagcctc gccgggcaga cgaaaccctg
     1261 cttcctcgct gatgcgaacc gcctgatcct gcccgcctac ggcgtctaca ccgggggcct
     1321 caggtcgcat gccccggcgc tgaccacgct catggcccgg gacgcgctcg cgatcctgac
     1381 gggtcggaaa gccataccca tgcccatgcc gcgctagtca ggccaagcga gagggtgcta
     1441 gccttgcagt cctagtgcca tgacgaggac ctctgatgcg ccccatcctc tttgccgcct
     1501 gccttgccgc cctgcccacg ctggccaccg ccgatcccgc tgcggactac ctgcgcctcg
     1561 ccgcggccct gccggacctt gaccccggcc gcgaccccat cagctacatg gcatctgcgc
     1621 aggacctggt ccaagggatg cagggccgtt ggctcctcgc accttacgtc atgctggccg
     1681 aagaggacgg cttccccccg gccgagacgc tgcagaagca ctgcgagatg gccggtatgg
     1741 aagcggcccc cgacggtccc ttgggcttta ccttgaccct gcccaccaat ggcgcgccct
     1801 tcaggctgcg gatgacc
//
LOCUS       DATGWW010000603         2779 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_388754, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000603 DATGWW010000000
VERSION     DATGWW010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2779
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_388754"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            179..820
                     /locus_tag="VK150_08780"
     CDS             179..820
                     /locus_tag="VK150_08780"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HLP31442.1"
                     /translation="MPICFDLDGTLGHFSSGFVLLREALGDLWGGAPTAEDLGRCGGS
                     TDWEIVDALHRMRFGRPLDEPGYAAYEGACIARFEAAFRPGGQEAVAFQGILAGLHRL
                     AGRGPVWLVSGNAPRLLDFKARVLGIDPAIPRLGSLPHHDRATLLKLALRGCGGPHLY
                     VGDRPHDLAAAQAAGMPFLGIGPAVPGGHRILAQDAAADHLVAAIEATLQATS"
     gene            859..2295
                     /locus_tag="VK150_08785"
     CDS             859..2295
                     /locus_tag="VK150_08785"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HLP31443.1"
                     /translation="MPQIYHRIRAFLDATTARVPVSIKLSVAFAAVLLLGVLGMGTFA
                     HMRARQQAVRGELATLALLSERLAGQVDAYLSTTRNLAQHLALTQNVEHFLATPPDQR
                     RAESLNPWLDQQVQGTQGPSAIFVMDPAGTCLASSTRAFIGENLGFRPYFQEAMAGRA
                     YSSDWFLGRVSRTPKLFSAAPVVRGGRVMGVLAAQYEVQELEAAIQSFGQSRRTAVLI
                     NHMGIALAHSQAVNVHHALAPLPAAVAKDLEQSQQFLGQAVQVDPLSTEFVTAFRQVL
                     QDGRSRTTQYRLGDQAKWGALSRVRGQPWVVSVAVPEADLLTPARAVWRETLTVGFLT
                     ACGAFLFALALVRLLLRPLRALSTAITAFGQGDPTARAPLQTHRELDQLALTFNTMAN
                     TIQNHRENLEALVLQRTQDLEKALADMKQLHGMIPICSYCKKIRDDGGSWWQLESYIQ
                     KHSEAEFSHGICPDCRTRHFPTAGPSGS"
     gene            complement(2282..>2779)
                     /locus_tag="VK150_08790"
     CDS             complement(2282..>2779)
                     /locus_tag="VK150_08790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31444.1"
                     /translation="AWLGLAMLLVLAGCREDPRRVENENLGIAVTFPGPPKLHRHTDP
                     GPFGEVEWFDLAMSPAGRLDETFSVAVGNLPPGDKGGTTPREILTTFQNFLGYRFGAL
                     QRLELPAEKGPGFRYKVKSNSGRAVEGIVVVRRGRLHHAQAIVRREGDPRTAAFLDDF
                     EVRTR"
BASE COUNT          408 a         1021 c          920 g          430 t
ORIGIN      
        1 ctcgagcggt tgcgtctcgc cgcgcatcca gagctgcatc cggtagcgca gcccttcggt
       61 ggcctgggct cccatcgtgg aagcggacaa taagaggagc atcaaccagc gcacggggcc
      121 accttcacct tcgaggatgc catcccgtgc gatcctgggc cagtgtggga gggccgccgt
      181 gccgatctgc ttcgacctcg atggcaccct cgggcatttc agctcaggtt tcgtgctgct
      241 gcgggaagcc ctgggcgacc tctggggcgg ggcccccacc gcggaggacc tgggccgctg
      301 cggcggctcc accgactggg agatcgtgga cgccctccac cggatgcgct tcggccggcc
      361 cctggacgaa cccggctacg ctgcctacga aggcgcctgc atcgcccgct tcgaggcggc
      421 cttccgcccc gggggccagg aggccgtggc cttccagggg atcctggcgg gcctgcaccg
      481 gctggcgggc cgcgggccgg tctggctggt gtcgggcaac gcgcccaggc tgctggactt
      541 caaggcccgg gtgctcggga tcgacccggc catcccccgc ctgggttccc tcccccacca
      601 cgaccgcgcc accctgctga agctggccct gcgcggctgc ggggggcccc atctctacgt
      661 gggcgaccgg ccccacgacc tggcggccgc ccaggcggcg ggcatgccct tcctgggcat
      721 cggccccgcg gtgccgggcg ggcaccggat cctggcccag gacgcggcgg ccgaccacct
      781 ggtggccgcc atcgaggcca cccttcaggc gacctcctga tccgatcagc ctggaaaagg
      841 gctacacttg cccccaccat gccgcaaatc taccatcgga tccgagcctt cctcgatgcc
      901 accacggccc gggtaccggt gtcgatcaag ctgagcgtgg ccttcgcggc ggtgctcctg
      961 ctgggggtgc tcggcatggg caccttcgcc cacatgcggg cccggcagca ggccgtccgc
     1021 ggggagctcg ccaccctcgc cctgctgtcg gagcggctgg cgggccaggt ggacgcctac
     1081 ctgtccacca cgcggaacct cgcccaacac ctggccttga cccagaacgt ggagcacttc
     1141 ctggccacgc cgcccgatca gcgacgggcc gagagcctga atccgtggct ggaccagcag
     1201 gttcaaggaa cccaaggccc ttccgccatc ttcgtgatgg atccggccgg cacctgcctg
     1261 gcgtccagca cccgggcctt catcggggag aacctcggtt tccggcccta tttccaggaa
     1321 gccatggcgg gccgagccta cagcagcgac tggttcctgg gccgggtgtc ccggacgccg
     1381 aagctgttct ccgcggcccc cgtggtccgg ggtggtcgcg tcatgggtgt cctggccgcc
     1441 caatacgagg tgcaggagct ggaggcagcc atccaatcct tcggccagtc ccggcgcacc
     1501 gcggtgctga tcaaccacat gggcatcgcg ctggcccaca gccaggcggt gaacgtccac
     1561 cacgccctgg cgccgcttcc cgctgccgtg gcgaaggacc tcgagcagag ccagcaattc
     1621 ctgggacagg ccgtgcaggt ggacccgctc tcgaccgaat tcgtcacggc cttccggcag
     1681 gtgctgcagg acggtcggtc gcgcaccacg caataccggt tgggcgatca ggccaagtgg
     1741 ggcgccctga gccgggtgcg cggacagccc tgggtggtct ccgtcgcggt gccagaggcc
     1801 gatctcctca cccccgcccg ggctgtatgg cgggagacgc tcaccgtggg gttcttgacc
     1861 gcctgtggcg ccttcctgtt cgccctggcc ctggtccgcc tcctgctgcg tcccctgcgt
     1921 gccctgtcca ccgccatcac cgccttcgga cagggggatc cgaccgcccg agcgcccctg
     1981 cagacccacc gtgagttgga ccagctggcc cttaccttca acaccatggc caacaccatc
     2041 cagaaccacc gggaaaacct ggaggccctc gtccttcagc ggacccagga tctagagaag
     2101 gccttggcgg acatgaagca gctccacggc atgatcccca tctgcagcta ttgcaaaaag
     2161 atccgcgatg acggcggcag ctggtggcag ctggagagct acatccagaa acactccgag
     2221 gccgaattca gccacggaat ctgcccagat tgccgtaccc ggcatttccc gaccgcgggg
     2281 cctagcgggt cctgacctcg aaatcatcga ggaaggccgc ggtgcgcggg tcgccctccc
     2341 ggcggacgat ggcctgcgcg tggtgcaggc ggccccggcg gaccaccacg atgccctcca
     2401 cggcccggcc cgagttgctc ttcactttgt agcggaagcc gggccccttc tccgccggca
     2461 gttccaggcg ctggagcgcg ccgaagcggt agcccaggaa gttctggaac gtggtgagga
     2521 tctcccgggg cgtcgtcccg cccttgtcgc cgggcggcag gttgcccacg gccacgctga
     2581 aggtctcgtc cagccggccc gcggggctca tggccaggtc gaaccactcc acctccccga
     2641 aggggcctgg atccgtgtgc cggtgcagtt tgggcgggcc ggggaaggtg acggcgatgc
     2701 ccaggttctc gttctcgacc cttcgcggat cctctctgca gcccgccagg acgagcagca
     2761 tcgcgagacc aagccaggc
//
LOCUS       DATGWW010000604         2306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_204022, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000604 DATGWW010000000
VERSION     DATGWW010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204022"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1028
                     /locus_tag="VK150_08795"
     CDS             <1..1028
                     /locus_tag="VK150_08795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31445.1"
                     /translation="LIPAAVAVVCLPWSVSCRPKPSVPGWVRSAPADSVVAFSGEAGW
                     MLTHKEVQALISRDPLVERALDLFLQKARINPRTETGRVTFHVIGVPQQVGGAMKQGL
                     EGSLQQGLEHVLIQLNQFKDPTALVGALAESFPQEGSLRLQGHDWPLYVILDLEVKGT
                     KAHIRAASDEKGQIWIGSLEALTRMAAKESLATQPDAALAAGWISPRAPFQGYLQPEA
                     LLGGLRKNLEGSFIKDLPQGVNALFWSVTPPQDANQPAKFELVLAGTAEGINQVSPWL
                     QRLVAAANAVQSAPGSAPELLQEKRRVGLRCTLTTEQLKLVMEKLGQPGFSFGPAAGA
                     KDRGPKA"
     gene            1025..1615
                     /locus_tag="VK150_08800"
     CDS             1025..1615
                     /locus_tag="VK150_08800"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLP31446.1"
                     /translation="MSPALPLSAEGGFASQEGESPEFWMAQLKAGREEALAHLMARFE
                     RPLLAFLHRRLQGEAGVVQELAQEVFLKCLQHCQRFEEGRPVAAWLFTLAANAATDHL
                     RRRGREVPPPETFDAPDPHQPSPWESVDQSRRIQALRGALEGLTPRQRAMVLAYYVHE
                     HPVKRIAQDLGCAEGTVKATLFQSLQKLRKTLGPQP"
     gene            1612..>2306
                     /locus_tag="VK150_08805"
     CDS             1612..>2306
                     /locus_tag="VK150_08805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31447.1"
                     /translation="MTPSLDPQRPDSQSSPIEPMDEARRFDLLDQPELWPEDPAVQAE
                     LAALLELHLALGSHGPALAGDLAAPARSRWNGSWTLAAAAVLLVALVPAAYSIQRTQS
                     LREQARDTARLEQLAQKRTQDRAWIAFFRQSTTLLQDFEQNPTLCKKGEEDRRQEREM
                     ALALLEASHQLAAQGAPIQEAEAIRASLHSWLSEIAFEDNCLSVERAQELRQWAAAHN
                     LETQAERMERRLRG"
BASE COUNT          374 a          892 c          712 g          328 t
ORIGIN      
        1 ccctgatccc cgccgcggtg gccgtcgtct gcctgccctg gagcgtctcc tgcaggccca
       61 agccttcggt tcccggctgg gtgaggtccg cccccgccga cagcgtggtc gccttctcag
      121 gcgaagcggg ctggatgctc acccacaagg aagtccaggc cctcatctcc cgggatccct
      181 tggtcgagcg cgccctggac ctcttcctcc agaaggcccg catcaacccc cgcaccgaga
      241 cggggcgggt gaccttccat gtcatcgggg tgccgcaaca ggtcggcggc gccatgaagc
      301 agggcctcga agggtccctc cagcagggcc tcgagcacgt gctcatccag ctcaaccagt
      361 tcaaggatcc cacggccctg gtgggggccc tggcggaatc cttcccccag gaaggcagcc
      421 tccggctgca ggggcacgac tggccgctct acgtgatcct cgacctcgaa gtcaagggca
      481 cgaaggccca catccgcgcc gccagtgacg aaaagggcca gatctggatc ggctccctgg
      541 aggccctcac ccgcatggcc gccaaggaaa gcctggccac ccagcccgac gccgccctgg
      601 ccgccggctg gatcagcccc cgggcgccct tccagggcta cctccagccc gaggccctgc
      661 tgggcgggct ccgcaagaac ctggaaggca gcttcatcaa ggacctgccc cagggggtca
      721 acgccctttt ctggagcgtg accccgcctc aggacgcgaa ccagcccgcc aagttcgagc
      781 ttgtgctggc agggaccgcc gagggcatca accaggtctc cccttggctc cagcggctgg
      841 tcgccgcggc caacgctgtg cagtccgccc ccgggtccgc cccggagctg ctgcaggaaa
      901 agcgccgggt gggcctgcgc tgcaccctga ccaccgagca gctgaagctc gtcatggaga
      961 aactcggcca gcccggcttc tccttcggcc ccgctgccgg cgcgaaggat cggggcccga
     1021 aggcatgagc cccgccctgc cgctttccgc cgagggcgga ttcgcctccc aggaaggcga
     1081 gtccccggaa ttctggatgg cccagttgaa ggccggccgc gaggaggccc tggcccacct
     1141 catggcccgt ttcgagcgcc ccctcctggc cttcctgcac cgccgcctcc agggggaggc
     1201 cggggtcgtc caggagctgg cccaggaggt ttttctcaaa tgcctccagc attgtcagcg
     1261 tttcgaagag ggtcgacccg tggccgcctg gctttttacg ctggcggcta atgcggcgac
     1321 ggaccacctg cgtagaagag ggcgggaggt accccctccc gagacctttg acgcaccgga
     1381 tccccaccaa ccctcaccct gggaatccgt ggaccaaagt cggagaatcc aggccctgcg
     1441 aggggccttg gagggtctga ccccccgcca gcgggccatg gtcctcgcct attacgtcca
     1501 cgagcatccg gtcaaacgga tcgcccagga tctgggctgc gccgagggaa ccgtgaaagc
     1561 caccctcttc caaagcctcc agaagctccg caaaaccctt ggaccccagc catgaccccc
     1621 tccctcgacc cccagcgccc cgattcccag agctccccca ttgagcccat ggatgaggct
     1681 cgccgcttcg acctgctcga ccagcccgag ctctggccgg aggatcccgc cgtgcaggcc
     1741 gaactggccg cgctgctgga gctgcacctg gccctcggtt cccacggccc cgccctggcc
     1801 ggcgacctcg ccgccccggc ccggtcccgc tggaacggat cctggaccct cgccgccgcg
     1861 gccgtcctcc tcgtggccct cgtccccgcg gcctactcca tccagcggac ccagtccctg
     1921 cgcgaacagg cccgggacac ggcccgcctt gagcagctgg cccagaagcg cacccaggat
     1981 cgcgcctgga tcgccttctt ccgccagagc accaccctgc tgcaggactt cgaacagaac
     2041 cctaccctat gcaagaaggg cgaggaggac cgccgccagg agcgcgagat ggccctggcc
     2101 ctgctggaag ccagccacca gctcgcggcc cagggtgcgc ccatccagga agcggaggcc
     2161 atccgcgcga gcctgcactc ctggctctcc gagatcgcct tcgaggacaa ctgcctgagc
     2221 gtggaacggg cccaggagct ccgccagtgg gccgcagccc acaaccttga gacccaggcc
     2281 gagcgcatgg aacgccgcct ccgtgg
//
LOCUS       DATGWW010000605         5555 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_204270, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000605 DATGWW010000000
VERSION     DATGWW010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5555
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204270"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..550)
                     /locus_tag="VK150_08810"
     CDS             complement(68..550)
                     /locus_tag="VK150_08810"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HLP31448.1"
                     /translation="MRMLFAALLSLPLLAGGGGTVAFKQTTFMAEVAVTEPEKAKGLM
                     YRQSLAKDRCMFFVYGEDGYHAIWMKNCLIALDVAWVDAEGRVVETSEHVPPCSPMRG
                     EDCPTYGGTVSSRFFVEFPAGTFKRLNLKRGDRLGWDLTLDDGRVLKGGAPVAKGKKK
                     "
     gene            689..3139
                     /locus_tag="VK150_08815"
     CDS             689..3139
                     /locus_tag="VK150_08815"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HLP31449.1"
                     /translation="MRARTLLAIPLVAGWAAGRLLATPGPETGMVALRAPGGIRLDGH
                     LDEAAWAAAPFATGFTQEWPQRGTPARQRTEVRVLYDERFLYVGARMLHDRRLEGGQA
                     RVVRRLHRRDQDSQSDWFGVSLDSNHDHRTALVFEVNAAGVQKDQVIYNDSSYDASWD
                     GVWESAVSTDAEGWTAELKIPLSLLRFKPGEGPQTWGINFNRVDQGVVRESSRWMVVP
                     RGEGGFVSRFPELRGLEGLRPQLRQEYLPYLSSARKFETTRGYDDRRWDNRAGLDARW
                     GLNSHAQVDLSVRPDFGQVEVDQAVLNLSTVETFFPEKRPFFLEGMDIFRVAGPDLLY
                     SRRIGQGLSDPDLGAGETLLDRPNATDITAAAKYTAKYASGTNVGLLGASVEPARATL
                     READGGQVRREISPLTNFGVLRVQQLMDDRGSYLGGFASAMHQAGPSGRVSQVQALDG
                     AYNSPDRGSLVEVTLSRSEAGPKDAQEQGWRERLRYQRRWRSGWTFEAQAINSGHDYN
                     PNDVGYLERADERRTFAQIYRTWDRTWGILRNWEVGFNHTLARDQAGHAFLRNYNTWA
                     RTDFTNFVALWGGGGVDAAIEDDRELRTYTDPLKKYLARPSLPYANLGFDTPANRPWY
                     LRVNTNRSWHEGGPSTDATLFQILKPGSAIEVQLSTTVTREEGELKWLETPVTTPIVG
                     LRRLSQLNQTLRVAYALSPRLTVQLFSQWLAANWDFRDLKHYADDRTLEVGLPEDLPP
                     GTTPQTAFSYRTWNLNLITRWEFRPGSAFFLVYTHGTSTDALINDRASLSPRYDLSLL
                     RHLPSDDVVQAKVSWLFR"
     gene            complement(3120..4334)
                     /locus_tag="VK150_08820"
     CDS             complement(3120..4334)
                     /locus_tag="VK150_08820"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HLP31450.1"
                     /translation="MTTPPLNPALFHLDREHLWVMHCAEGPVPRAAMRAVRAFMQKEL
                     QPWEMRWEEDFLGIPAAVRGEAAALIGGRAEDISLTPTTSSALVTVAQGFPWSPGDEV
                     LAPLGEFPSNAWPWLALNQRGVAFREVPLWEGHRAGAEAWTSLPPTVEADPEARLIAA
                     IGPRTRILTLSWVRFQDGLKLDLRRLGSACRERGVHLVVDGIQGAGAVSLDLEGLSAF
                     ATGGYKGLLAPEGLGFLWAEEPFRQSLSPSGSWLSVEAATDFGRPSTDFHRAWLADGR
                     SLEAGGPNLLHASALLESLRLLNGAGVSVIAAHVAHLQARLLDALEDSPWRTECVRLK
                     ALLKADRLGPFLALHHGGDGQTRMQALLQSGYRRGVFASVREGYLRIAFHGFHSEADV
                     DRVAAWLTGTTS"
     gene            complement(4331..5011)
                     /gene="thyX"
                     /locus_tag="VK150_08825"
     CDS             complement(4331..5011)
                     /gene="thyX"
                     /locus_tag="VK150_08825"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: protein motif:HMM:TIGR02170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0009265 - 2'-deoxyribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HLP31451.1"
                     /translation="MKSQEIRVLDKGFVRLIDHMGSDLSVVNAARVSFGKKKEAFEEG
                     DAKLVAYLAEHEHTSPFRHTALTLHVKAPIFVFRQWMKHRIGSEFNEISGRYVEFPED
                     EFFVPETFRRQAKVNKQGSEGAIDEANHGKAMESYLASCRSAVAHYKELLSLGVCREQ
                     ARCVLPVALYSEVYWTVSLQAVAHFIRLRADSHAQWEIQQYAAAVRQVVEPLYPVGLK
                     ALLASGKG"
BASE COUNT          908 a         2025 c         1808 g          814 t
ORIGIN      
        1 cctgacccgg cctccgcggc gcgggaaaga aggggccaag tccgacgagt agggctagaa
       61 acggccgcta cttcttcttg cccttggcca ccggggcgcc gcccttcagc acccggccgt
      121 cgtccagcgt gaggtcccag cccaggcggt ccccccgctt gaggttcagc cgcttgaacg
      181 tgcccgcagg gaactccacg aagaagcggg aggacacggt gcctccgtag gtggggcaat
      241 cctcgccgcg catggggctg cagggaggca cgtgctcgga ggtctccacc acccggccct
      301 ccgcgtccac ccaggccacg tcgagggcga tgaggcagtt cttcatccag atggcgtggt
      361 agccgtcctc gccgtagacg aagaacatgc agcggtcctt cgccaggctc tgccggtaca
      421 tgaggccctt ggccttctcg ggttcggtga cggccacctc ggccatgaag gtggtctgct
      481 tgaaggccac ggtccctcca ccccccgcca gcagcggaag ggaaagcagg gcggcgaaca
      541 gcatgcgcat ggcgactcct tgacgaccag tatccgatga atgccctcag gttcgcgaag
      601 gatccccacc aagacgtccg gacagcatca tacctcgcaa gctgtggcac catggacctg
      661 agcggctcga cgcgccgcca ggagagccat gcgcgccagg accctgctcg cgattccgtt
      721 ggtggccgga tgggccgccg gacggctgct ggccaccccg ggacctgaga ccggcatggt
      781 ggccctgcgc gcgccgggcg gcatccgcct ggacggccac ctcgacgagg ccgcctgggc
      841 ggcggcgccc ttcgccacgg gattcaccca ggagtggccg cagcggggca cgcccgcccg
      901 ccagcgcacc gaggtgaggg tgctctacga cgagcggttc ctctacgtcg gggcccggat
      961 gctgcacgac cgccggctgg aaggcggcca ggcccgggtg gtgcgccggc tgcaccgccg
     1021 cgaccaggac agccagagcg actggttcgg cgtgtccctg gattccaacc atgatcaccg
     1081 caccgccctg gtcttcgagg tgaacgccgc gggcgtgcag aaggaccagg tcatctacaa
     1141 cgacagctcg tacgacgcca gctgggacgg cgtctgggag agcgccgtga gcaccgacgc
     1201 ggagggctgg accgccgagc tgaagatccc cctctccctc ctgcgcttca agcccggcga
     1261 gggcccccag acctggggca tcaacttcaa ccgggtggac cagggcgtgg tgcgcgaatc
     1321 cagccgctgg atggtggtgc cccggggcga gggcggcttc gtgtcccgct tcccggagct
     1381 tcggggcctg gaaggcctgc ggccccagct tcgccaggaa tacctcccct acctcagctc
     1441 cgcccggaag ttcgagacca cccgcgggta cgacgaccgc cgctgggaca accgcgccgg
     1501 cctggacgcc cgctggggcc tcaactccca cgcccaggtg gatctctcgg tgcggcccga
     1561 tttcggacag gtggaggtgg accaggcggt gctcaacctc agcaccgtgg agaccttctt
     1621 ccccgagaag cggcccttct tcctggaggg catggacatc ttccgcgtgg cggggccgga
     1681 tctcctctac agccgccgca ttggacaggg actgtccgat ccggacctcg gcgccgggga
     1741 gaccctcctc gaccgcccca acgccacgga catcaccgcc gcggcgaaat acaccgccaa
     1801 atacgccagc ggcaccaacg tcggcctcct cggcgcgagc gtcgagccgg cccgggccac
     1861 cctgcgggag gcggacggcg gccaggtgcg ccgggagata tcccccctca ccaacttcgg
     1921 cgtcctccgc gtccagcagc tcatggacga ccgcggcagc tacctgggcg ggttcgcctc
     1981 cgccatgcac caggccgggc cgtccggccg cgtctcccag gtgcaggccc tcgacggggc
     2041 ctacaacagc cccgatcgcg gcagcctggt ggaagtcacc ctgagccgca gcgaggccgg
     2101 acccaaggac gcccaggagc aggggtggcg ggagcggctc cggtaccagc ggcggtggcg
     2161 cagcggctgg accttcgagg cccaggccat caactcgggg cacgactaca accccaacga
     2221 cgtgggctac ctcgagcggg ccgacgagcg ccgcaccttc gcccagatct accggacctg
     2281 ggaccgcacc tgggggatcc tgcgcaactg ggaggtgggc ttcaaccaca ccctggcgag
     2341 ggaccaggcc ggccacgcct tcctgcgcaa ctacaacacc tgggcccgca cggacttcac
     2401 caacttcgtc gccctctggg gcggcggcgg cgtggacgcg gccatcgagg acgaccgcga
     2461 gctcaggacc tacaccgatc ccctcaagaa gtacctggcc cggccctccc tgccctacgc
     2521 caacctcggc ttcgacacgc ccgccaaccg gccctggtac ctccgcgtca acaccaaccg
     2581 ctcttggcac gagggcgggc cctccaccga cgccaccctg ttccagatcc tcaagcccgg
     2641 ctccgccatc gaggtgcagc tgtccaccac cgtcacccgc gaggagggcg agctgaagtg
     2701 gctggagact cccgtgacca cccccatcgt gggtttgcgc cgcctcagcc agctcaacca
     2761 gaccctgcgc gtggcctacg ccctgtcgcc gcgcctcacg gtgcagctct tcagccagtg
     2821 gctggccgcc aactgggatt tccgcgacct caagcactac gccgacgacc gcaccctgga
     2881 ggtgggcctg cccgaggacc tgccccccgg caccacgccc cagacagcct tcagctaccg
     2941 cacctggaac ctgaacctca tcacccgctg ggaattccgg cccggatcgg cgttctttct
     3001 cgtctacacc cacggcacca gcaccgacgc cctcatcaac gaccgggcca gcctctcgcc
     3061 gcgctacgac ctctccctgc tgcgccacct gccatccgac gacgtggtgc aggcgaaggt
     3121 cagctggttg ttccggtgag ccaggcggcg acccggtcca cgtcggcctc cgagtggaag
     3181 ccgtggaagg cgatccgcag gtagccctcc cgcaccgagg cgaagacgcc gcgccggtag
     3241 ccggactgga gcagggcctg catgcgggtc tgcccgtcac cgccgtggtg gagggccagg
     3301 aagggaccca gacgatcggc cttcagcagc gccttcaggc ggacgcactc ggtccgccag
     3361 ggcgagtcct ccagggcgtc gaggagcctc gcctgcagat gggccacatg ggcggcgatg
     3421 acggacacgc ccgcgccgtt gaggagccgc agggattcca gcagcgccga ggcgtgcagc
     3481 aggttcgggc cgcccgcctc gagggagcgg ccatccgcca gccaggcgcg gtggaagtct
     3541 gtcgaaggcc ggccgaaatc cgtggcggct tccaccgaga gccagctgcc cgaaggcgac
     3601 agggactgtc gaaacggttc ctccgcccac aggaatccca ggccctcggg ggccagcagg
     3661 cccttgtagc cgccagtggc gaaggcggaa agtccctcca ggtccaggga cacggcgccc
     3721 gcgccctgga tgccatccac caccaagtgg acaccccgct cccggcaggc ggatccgagg
     3781 cgccgcagat cgagcttcag gccgtcctgg aagcgaaccc aggagagcgt caggatgcgg
     3841 gtccggggac cgatggccgc gatgagccgc gcctcgggat cggcctcgac ggtgggcggc
     3901 aggctcgtcc aggcctcggc cccggcccgg tggccctccc acagcgggac ctcgcggaag
     3961 gccaccccgc gctgattgag cgccagccag ggccaggcgt tggaggggaa ttcccccagc
     4021 ggcgcgagca cctcgtcgcc cggcgaccac ggaaagccct gggccacggt caccagggcc
     4081 gacgaggtgg tgggcgtcag ggaaatgtct tcggcccgtc cgccgatgag ggccgcggcc
     4141 tcgccccgca ccgccgcggg gatcccgagg aaatcctctt cccagcgcat ctcccagggc
     4201 tgcagttctt tttgcatgaa ggcccggacg gcccgcatgg cggcccgggg caccggcccc
     4261 tcggcgcagt gcatcaccca caggtgttct cggtccaggt ggaacagggc ggggttgagg
     4321 ggcggcgtgg tcatcccttg cctgaggcca gcagggcctt gaggcccacg ggatagaggg
     4381 gctccaccac ctgccgcacg gcggcggcgt actgctggat ctcccactgg gcgtggctgt
     4441 ccgcccgcag tcggatgaag tgggccaccg cctggaggct cacggtccag tacacctccg
     4501 agtacagcgc caccggcagc acgcagcggg cctgctcgcg gcagaccccc agcgagagca
     4561 gctctttgta gtgggccacg gcgctgcggc agctcgccag gtagctctcc atggccttcc
     4621 catggttggc ctcgtcgatg gcaccctcgc tgccctgctt gttgaccttg gcctggcgac
     4681 ggaaggtttc cggcacgaag aattcatcct ccggaaactc cacatagcgg ccgctgatct
     4741 cgttgaactc cgagccgatg cgatgcttca tccactgccg gaacacgaag atcggcgcct
     4801 tcacgtgcaa ggtcagcgcc gtgtgccgga agggcgaggt gtgttcgtgc tcggcgaggt
     4861 aggccaccag cttggcgtcg ccctcctcga aggcctcctt cttcttgccg aaggaaaccc
     4921 gcgctgcgtt caccacagaa aggtccgagc ccatgtgatc gatcaaccgg acgaatccct
     4981 tgtcaaggac tcggatctcc tggctcttca tccacgctcc ctggtcgaac agccagtgta
     5041 gccatcctct cccgccccga gtcggggtcc gccattccag gagaatcgct cccgggttga
     5101 ccccccatgc gaggcccgat cctgcgcaca ccctcctcga cccgcctgcg accgttcggc
     5161 tggcaaattg ccaccgttca aggggtcctc ccgaaatcat taaagaacct tgtcatcatg
     5221 attccttcgg ccggataacc tggagctgct tcagtgattc agccgcaggt cctcatgttt
     5281 cgggttcgtt ctttgtcggt ctgggtggga atacggcaca cggcgctcac gcgtcctggg
     5341 tccgggtgcc tgcccttcgt tcaacggggc cgggccgcgt cgtctcgact gtgaccaagc
     5401 cccttggccc aaatcacacg ttcacggtcc atcccgaggt caaaaatgaa gggtttcctc
     5461 cgcgacacaa ggttcttctg ccttgcaacc gccctgctgc tcgccgcctg cggaggcgga
     5521 tcaggtggtt cggcgtcatc ggggggaagc acacc
//
LOCUS       DATGWW010000606         2670 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_159606, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000606 DATGWW010000000
VERSION     DATGWW010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159606"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1849)
                     /locus_tag="VK150_08830"
     CDS             complement(<1..1849)
                     /locus_tag="VK150_08830"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HLP31452.1"
                     /translation="MPYLSWTEGTQLMRHAVHEACQLGRDPVACALAQPGMLSVSRVH
                     AAIDRVGGIWWLRDLDSANGTLVNGRPLDQVQGQALMEGDEVQLGDWRLTFTEGFPGL
                     DGTTFAERVGDLFQEVRPEPAQALVLVRGIELLQRATEKLLRQADADAMVKGLLEESL
                     HLLGGDRGFLAMRQGEMGWRTAHRVGEVQEGIGLSRSVLDYVSSERTAVLSNRPLADP
                     RFGGMSLVELHRGSLLCAPMEDEGELQGVLYLDRESEGRPFTRFDLAIFQAFVRLGSM
                     ALRQAMMNRRALGQAEQQGEVLRLRNERQREADRHGQLLAAMAGPLRRVQSWAEDLPA
                     AVGEAIRSQLDLVNALMDQGHRDGTSDEAPLAGHPLALAALQEELIHRWASLLGLRKA
                     RLTAADAPPASVWMTGGPLLTALAGLVEPMFMQLAAGTVVTARWDQERGYRILRLSLP
                     AGLHGPVPDPWTQGVLQESGVRWVWADQSLDLHFPEGPDAMPEEPARPLLGLVSEELN
                     LLGLFQTVAEAGDLWLHPLEHEPPPPPLPKFRFLVIDAQGTHDLEGCIRAYRHHPSFA
                     TTPILVVRCTEDDTPRLIAAGATDWLAEGFRWEALHHRLQVLRGHTELQQ"
     gene            complement(1895..2194)
                     /locus_tag="VK150_08835"
     CDS             complement(1895..2194)
                     /locus_tag="VK150_08835"
                     /inference="COORDINATES: protein motif:HMM:NF014087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YhbY family RNA-binding protein"
                     /protein_id="HLP31453.1"
                     /translation="MLTSKQRQSLKAQAHKLKPVMHVGKGGVTPAQARELDVMVDSLE
                     LVKVKINPNSFEDEATAAKALCAAVPGLEHVWTIGHTMLFFRPSRTHDTRYPLPV"
     gene            2239..>2670
                     /locus_tag="VK150_08840"
     CDS             2239..>2670
                     /locus_tag="VK150_08840"
                     /inference="COORDINATES: protein motif:HMM:NF027542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M64 N-terminal domain-containing
                     protein"
                     /protein_id="HLP31454.1"
                     /translation="MPCPTVRPLLLALATLACLAAPPRTLRVDYGHTGDATVERFGVD
                     RVVLEPLPWPGDLAKAVDTSNLGKYCFEVADKATGKVLYSRGFASIFGEWETTDEAKA
                     LSRTFGESLRFPQPEAPVRIQVKKRDERNAFKTLWTFDLDPK"
BASE COUNT          396 a          937 c          936 g          401 t
ORIGIN      
        1 gctgctgcag ctccgtgtgg ccccgcagca cctgcaggcg gtggtgcagc gcctcccagc
       61 ggaagccctc ggccagccag tcggtggccc ccgccgcgat gagccgcggc gtgtcgtcct
      121 ccgtgcagcg gaccaccagg atgggggtgg tggcgaaaga aggatggtgg cggtaggcgc
      181 ggatgcaccc ttccaggtcg tgggtgccct gggcgtcgat gaccaggaac cggaacttgg
      241 gcaggggtgg cggcggcggc tcgtgttcca gcgggtgcag ccagaggtca cccgcctcgg
      301 ccacggtctg gaagaggccg agcaggttca gctcttcgct caccaggccc agcaggggcc
      361 gcgcgggctc ctcgggcatg gcgtcgggac cttccgggaa gtggaggtcc agggactggt
      421 cagcccacac ccaacggacg ccggattcct gcagcacgcc ctgggtccag gggtcgggca
      481 cgggaccgtg gaggccggcg ggcaggctca ggcgcaggat ccggtagccc cgctcctggt
      541 cccagcgcgc ggtcaccacg gtgcccgccg ccagctgcat gaacatgggc tcgacaagcc
      601 ccgcgagggc ggtgaggagc ggtccgccgg tcatccacac cgaggccggg ggcgcatcgg
      661 cggcggtgag ccgggccttc ctcaacccca gcagcgatgc ccagcggtgg atcagttcct
      721 cctgcagcgc ggcgagggcc aggggatgtc ccgccagggg cgcctcgtct gaggtgccgt
      781 cgcggtggcc ctggtccatg agggcattca ccaggtccag ctgtgaccgg atggcctcgc
      841 ccactgccgc cggcaggtcc tccgcccagc tctgcacgcg gcgcagggga cccgccatgg
      901 cggcgagcag ctggccgtgg cggtcggctt cccgctgccg ctcgttacga aggcgcagga
      961 cctcgccctg ctgctccgcc tggcccaggg cccggcggtt catcatggcc tgccgcaggg
     1021 ccatggagcc caggcgcacg aaggcctgga aaatggccag atcgaagcgg gtgaacggcc
     1081 gcccctccga ttcgcggtcc aggtagagca cgccctggag ctcgccctca tcttccatgg
     1141 gggcgcagag cagcgagccc cggtgcagct ccaccaggct catgcccccg aagcggggat
     1201 ccgccagggg ccggttggac agcaccgcgg tgcgctcact cgagacatag tcgagcaccg
     1261 accgcgaaag tccgatgccc tcctgcacct cgcccacgcg gtgggccgtg cgccagccca
     1321 tctctccctg ccgcatggcc aggaagcccc ggtcgccgcc cagcaggtgg agggattcct
     1381 ccagcaggcc cttcaccatg gcgtccgcgt cggcctgccg gagcagtttc tcggtggcgc
     1441 gctggagcag ctcaatgccc cgcaccagca ccagggcctg ggccggttcg gggcggacct
     1501 cctggaacag gtcgcccaca cgctcggcga aggtggtgcc atcgagcccc gggaagccct
     1561 ccgtgaaggt cagccgccag tcgcccagct gtacctcgtc accctccatg agggcctgcc
     1621 cctggacctg gtcgaggggt ctgccgttca ccagggttcc gttggcggag tccagatccc
     1681 ggagccacca gatgcccccg acccggtcga tggcggcgtg gacacgggac acggacagca
     1741 ttccaggctg agccaaggcg caggcgaccg ggtcccgacc cagctggcag gcctcgtgga
     1801 cggcgtgccg catcagctgg gtcccctccg tccaggacag gtaaggcatc gaacctccac
     1861 cccacccttt cggtgcccgg ccgcggatcc tgaattaaac gggcaaagga taccgcgtgt
     1921 cgtgggtgcg gctgggccgg aagaagagca tggtgtggcc gatggtccag acgtgctcga
     1981 gccccggcac ggcggcacag agggccttgg cggccgtggc ttcgtcctcg aagctgttgg
     2041 ggttgatctt caccttcacc agctcgaggc tgtccaccat cacgtcgagt tcccgggcct
     2101 gggcgggggt cacgcccccc ttccccacat gcatgacggg cttgagcttg tgggcctggg
     2161 ccttgaggga ctgccgctgt ttcgaggtga gcatcggatc tccggggttc cagtctatct
     2221 tgattggcga ggtgccccat gccctgcccg accgtccgtc ccctgctgct cgccctggcc
     2281 accctggcct gcctggccgc cccgccccgg accctccggg tggactacgg ccacaccggg
     2341 gatgccaccg tggagcgctt cggggtggat cgcgtggtgc tggagcccct gccctggccg
     2401 ggcgacctcg cgaaggccgt ggacaccagc aatctcggga agtactgctt cgaggtggcc
     2461 gacaaggcga ccgggaaggt gctctattcc cggggttttg ccagcatttt cggcgagtgg
     2521 gagaccaccg acgaggccaa ggccctgagc cggactttcg gcgaatccct gcggttcccc
     2581 cagcccgagg cgccggtgcg catccaggtg aagaagcgcg atgaacgcaa tgccttcaag
     2641 accctctgga ccttcgatct ggatcccaaa
//
LOCUS       DATGWW010000607         1828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_123046, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000607 DATGWW010000000
VERSION     DATGWW010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123046"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..922)
                     /gene="yvcK"
                     /locus_tag="VK150_08845"
     CDS             complement(<1..922)
                     /gene="yvcK"
                     /locus_tag="VK150_08845"
                     /inference="COORDINATES: protein motif:HMM:NF014042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine diphosphate-N-acetylglucosamine-binding
                     protein YvcK"
                     /protein_id="HLP31455.1"
                     /translation="MASPTVLHADQPLRVVALGGGTGLAALLRALKREAGRSRDPWKL
                     TGIVTVSDNGGSSGRLRDELGGIPPGDLRNCLSALTMEDSALSDLLNYRFKGEGSLAG
                     HSLGNLMLWALADLTGDWVRAIRQLSGVLVTVGRLFPSTVVPVTLCAEDMDGRRYLGE
                     TAVGACPPPLARLWLDPREAEPLPEAVLALLRSDLILLSPGSLYTSTISNLLIDELQE
                     AVESSRSPVLYVANLMTEPGETSGLDLENHLAAISAFARTRISAVIVNATPLPPDMLA
                     RYREEGAEPLLAEADRVLGIPVHRFPLLDPE"
     gene            complement(942..1475)
                     /locus_tag="VK150_08850"
     CDS             complement(942..1475)
                     /locus_tag="VK150_08850"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP31456.1"
                     /translation="MATKAKTDTAPKSTPAPAQAPQSAFAASYAKAVKLFESGKHAEA
                     VKAFESLLQETQAAGDWAVKRRVQVFLAIAEAKLHPAKAAAADPASEIQACLNRRQTD
                     EALKLAEKAVKAHPASGSLHYLRAVAFAQAENTEASAESLKKAVELDGDLVFQWHMEP
                     DFNPIRKSPLFAFTEGR"
     gene            complement(1587..>1828)
                     /locus_tag="VK150_08855"
     CDS             complement(1587..>1828)
                     /locus_tag="VK150_08855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31457.1"
                     /translation="GIFLVVFLGVFTMAPGVDKMAFLSYVPVVNVCIALRKMFSQQPN
                     WAEYIIAFAMTVGLAGLMTLVSTRVLNREKALFKA"
BASE COUNT          291 a          589 c          673 g          275 t
ORIGIN      
        1 cctcggggtc cagcagggga aatcggtgga ccgggatgcc caggacgcgg tccgcctcgg
       61 ccaggagcgg ctcggcgccc tcctcccggt accgggccag catgtcgggg gggaggggcg
      121 tggcgttgac gatgacggca ctgatccggg tccgggcgaa ggcggagatg gcggccaggt
      181 ggttctccag gtccaggccc gaggtctccc cgggctcggt catgaggttg gccacgtaaa
      241 gcaccggaga ccgggaggat tccaccgcct cctgcagctc gtcgatgagc aggttcgaga
      301 tggtcgaggt gtacaggctg cccggggaca ggaggatgag gtccgagcgc agcagggcca
      361 gcacggcttc cggcaggggc tcggcctccc gggggtccag ccaaaggcgc gccaggggcg
      421 gcgggcatgc gcccacggcg gtctccccca ggtagcgccg gccgtccatg tcctcggcgc
      481 agagggtgac gggcaccacc gtggaaggaa acagccggcc cacggtcaca aggacgcccg
      541 agagctggcg gatggcccgc acccagtcac cggtgaggtc cgccagggcc cagagcatga
      601 ggttgccgag ggagtgcccg gccaagctgc cctcgccctt gaaccggtag ttcagcagat
      661 ccgagagggc cgagtcctcc atggtcagcg ccgagaggca gttgcgcagg tcgcccgggg
      721 gaatgccgcc gagttcatct cgcaggcgcc ccgacgagcc cccgttgtcg gagaccgtca
      781 cgatgcccgt gagcttccaa ggatcccggc tgcgtcccgc ctcccgcttg agggcgcgga
      841 gcagggcggc caggcccgtg ccgcccccca gggccaccac ccgcaagggc tggtcggcgt
      901 ggaggaccgt cggactggcc atgggcccgg gctcccgggg ctcagcggcc ttcggtgaac
      961 gcgaagagcg gggacttgcg gatggggttg aagtccggct ccatgtgcca ctggaagacc
     1021 aggtcgccgt ccagttcgac agccttcttc aggctttcgg ccgacgcttc ggtgttctcg
     1081 gcctgggcga aggcgacggc ccgcaggtag tggagggaac cggaggccgg gtgggccttc
     1141 acggccttct ccgcgagctt gagggcctca tcggtctggc ggcggttcag gcaggcctgg
     1201 atctcggagg cggggtcggc ggcggcggcc ttggcgggat gcagcttggc ctcggcgatg
     1261 gcgaggaaca cctggacccg gcgcttcacg gcccagtcac cggccgcctg ggtttcctgg
     1321 agcaggctct cgaaggcctt cacggcttcg gcgtgctttc cggattcgaa gagcttcacg
     1381 gccttggcat agctggcggc aaaggccgac tggggagcct gagcgggtgc gggggtggac
     1441 ttgggggccg tatctgtctt cgccttcgtc gccatgcgga atcctttgga agccttcggg
     1501 aaactataga gtgacagctt ttccggggca aatcccggcc tcgcgacgcg agactcccac
     1561 tccggtcccg aaacccaggc ccgggctcac gctttgaaga gggccttctc ccggttcagg
     1621 acccgcgtgg agaccagggt catgaggccc gccaggccca ccgtcatggc aaaggcgatg
     1681 atgtattcgg cccaattcgg ctgctggctg aacatcttcc ggagggcgat gcagacattc
     1741 accaccggca cgtacgacag gaaggccatc ttgtccacgc cgggcgccat ggtgaagacg
     1801 cccaggaaca ccaccaggaa gatgcccg
//
LOCUS       DATGWW010000608         3340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_389248, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000608 DATGWW010000000
VERSION     DATGWW010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3340
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389248"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1523
                     /locus_tag="VK150_08860"
     CDS             <1..1523
                     /locus_tag="VK150_08860"
                     /inference="COORDINATES: protein motif:HMM:NF012731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HLP31458.1"
                     /translation="RRTLFQLRKAEERHHILMGLKIALDFLDAVIKLIRGAKSPEEAK
                     AGLMAGAFATAAAIKKDPTLCLSAVQAQAILDMRLQRLTGLEREKILDELAELEKTIA
                     RLKAILADEKLLLKVIKEELQQVADQFGNDRRTEIVGYSGEIRMEDVVPDDPMVVTMS
                     KAGYIKRTDLTAYRRQRRGGRGKVGMKTKDEDFVEQLFMTKAHDTLMAFTDKGIVYAL
                     KVYDLPEAAASTRGKHIRNLISLKDGENVVTLMALRDFPEGENLVFATADGTVKKSSL
                     AAYANIRANGLIALNIDDGNSLVAVRRSTGAQQIVLATAQGKAIRFPEEDVRATGRAT
                     TGVRGMKLAKGDHIVDMEVADPLPDLPEGVEPDESTEDHGMLLTVCEKGYGKRSLLQD
                     YRLQGRGGTGVINIRAGVRNGQVVGFKLVKPGEGCLLISQEGMVIRFLIDEVRKTGRN
                     AQGVGLLKLASAEDRVVGLAKIDASAMALDEEEDLIEGEVAHPGPDEGGEQPKLGL"
     gene            complement(1608..2036)
                     /locus_tag="VK150_08865"
     CDS             complement(1608..2036)
                     /locus_tag="VK150_08865"
                     /inference="COORDINATES: protein motif:HMM:NF017868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase family protein"
                     /protein_id="HLP31459.1"
                     /translation="MGADGLFVYGTLREGGTHHAWLLRTHPEGLTRAWVAGRLFHLPA
                     GYPAFVPGPVPPGPPPGPGWVHGEFVGYEDDQDLESALADLDPLEGVEEDLFSREVLP
                     VQLEGGQRYRAWVYLFHVERLPRLEREAVELPDGDWAPYL"
     gene            complement(2026..>3340)
                     /locus_tag="VK150_08870"
     CDS             complement(2026..>3340)
                     /locus_tag="VK150_08870"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP31460.1"
                     /translation="MALRFGPRHTAAGVALLSLAFLAQLWTLGPVLPDEAFRFSQLHL
                     LVLALAAFVSSAAAEEARLARLALETRDLQAQRMEAVGTLAGGLVHEFNNQLTVVLGN
                     LDRLRAHLPPGDEAPDLAWRLEEAALSMGSTVQQLKALSHQVPLQTQPLPIREALVPF
                     LAIAQDLPGRIAFHVQVDENPVVGLEPELLTQALQRLLANSVQAIPGQGHITLRVWRE
                     DTWVHLALEDDGLGMSPEVLQRACDPFYTTKPQATSRGLGLSIAFALVRQLGGQLLLD
                     SQPGRGTRAEFVLPLAPADQMRGATSPAAPRTGRILLADDESGIRELARAFLQEEGFV
                     VQEAADGQEALEAFLADPQGWDLVILDLVMPRLGGAEALNRIQALRPDLPVLLMSGYS
                     TDGRSGLLDGPHRGFLSKPFRLQELRQAIQDLGLSPSTGGTSHGG"
BASE COUNT          586 a         1111 c         1203 g          440 t
ORIGIN      
        1 cccggcgcac cctgttccag ctgcgcaagg ccgaggagcg gcaccacatc ctgatgggcc
       61 tgaagatcgc cctggacttc ctggatgcgg tgatcaagct gatccgcggg gccaagagcc
      121 ccgaagaggc caaggccgga ctcatggccg gggccttcgc caccgccgcc gccatcaaga
      181 aggatcccac cctctgcctg tcggccgtgc aggcccaggc cattctggac atgcgcctcc
      241 agcgcctgac cgggctggag cgcgagaaga tcctcgacga actggccgag cttgagaaga
      301 ccatcgcccg gctgaaggcc atcctggccg acgagaagct gctcctgaag gtcatcaagg
      361 aggagctgca gcaggtggcc gaccagttcg gcaacgaccg ccgcaccgag atcgtcggct
      421 actccggcga gatccgcatg gaagacgtgg tccccgacga tcccatggtc gtcaccatgt
      481 ccaaggcggg ctacatcaag cgcacggacc tcaccgccta ccgccgccag cggcgcgggg
      541 gccggggcaa ggtgggcatg aagaccaagg acgaggattt cgtcgagcag ctcttcatga
      601 ccaaggccca cgacaccctc atggccttca ccgacaaggg catcgtttac gccctgaagg
      661 tgtacgacct gcccgaggcg gccgcctcca cccggggcaa gcacattcgc aacctcatct
      721 ccctgaagga cggggagaac gtggtcaccc tcatggcgct gcgcgacttc cccgagggcg
      781 agaacctggt cttcgccacc gccgatggca cggtgaagaa gtcgagcctc gcggcctacg
      841 ccaacatccg ggccaacggc ctcatcgccc tcaacatcga cgacggcaac agcctggtgg
      901 ccgtgcggcg ctccaccggg gcgcagcaga tcgtcctggc caccgcccag ggcaaggcca
      961 tccggttccc cgaagaagat gtccgcgcca cgggccgcgc caccacgggc gttcgaggca
     1021 tgaagctggc caagggcgac cacatcgtgg acatggaagt ggcagacccc ctgccggacc
     1081 tgccggaagg cgtcgagccc gacgagagca ccgaggacca cggcatgctg ctgacggtct
     1141 gcgagaaggg ctacggcaag cgcagcctcc tccaggacta ccggctccag ggccggggcg
     1201 gcaccggggt catcaacatc cgcgccgggg tccgcaacgg tcaggtggtg ggcttcaagc
     1261 tggtcaagcc cggggaaggg tgcctcctca tcagccaaga gggcatggtc atccgcttcc
     1321 tcatcgatga ggtgcgcaag accggccgca acgcccaggg tgtcggcctc ctcaagctgg
     1381 ccagcgccga ggatcgggtg gtgggcctgg ccaagatcga cgccagcgcc atggccctgg
     1441 acgaggagga ggacctgatc gagggtgaag tcgcccaccc gggtcccgac gagggtggcg
     1501 aacagccgaa gctcgggctg tgatccaccg aggatttccc agatagcctc aacacaaaag
     1561 gaccggctga gccggtcctt ttgcctgtct cgcggcgggc tcgaatccta gaggtagggc
     1621 gcccagtccc cgtccggcag ttcgacggcc tcgcgctcga ggcggggcag acgttccaca
     1681 tggaacaggt agacccaggc gcggtagcgc tggcccccct caagctggac gggaaggacc
     1741 tcgcggctga acaggtcctc ctcgaccccc tccaggggat ccaggtcggc cagggcggat
     1801 tccaggtcct ggtcatcctc gtagcccacg aactccccgt gcacccaccc gggtcccggt
     1861 ggcggacccg ggggcacggg tccgggcacg aaggcggggt agccggcggg caggtggaat
     1921 agccgcccag cgacccaggc ccgggtcagc ccctccggat gggttcgcag cagccaagca
     1981 tgatgggtgc cgccttctcg gagggtgccg tagacgaaga ggccgtcagc ccccatggga
     2041 ggtcccaccg gtggaggggg atagccctag gtcctggatg gcttgccgga gttcctggag
     2101 gcggaagggc ttggacagga acccgcggtg gggcccatca aggaggcccg agcggccgtc
     2161 ggtgctgtag ccgctcatga gcaggacggg caggtccggg cggagggcct ggatgcggtt
     2221 cagggcctcc gcgcccccca gcctgggcat gaccaggtcc aggatgacca ggtcccagcc
     2281 ctgcggatcg gcgaggaagg cctcgagggc ctcctggcca tcggcggcct cctggacgac
     2341 gaacccttcc tcctgcagga aggcgcgggc cagctcccgg atgccggact cgtcgtccgc
     2401 caggaggatc cgcccggtcc tgggggcggc gggagaggtg gcgcctcgca tctggtcggc
     2461 gggggcgagg ggcagcacga actcggcgcg ggtaccccgc cccggctggc tgtccaggag
     2521 cagttgaccg cccagctgcc ggaccagggc gaaggcaatg gagagcccga ggccccggct
     2581 ggtggcctgg ggcttggtgg tgtagaaggg atcgcaggcc cgctggagca cctcgggact
     2641 catgccgagg ccgtcatcct ccagggccag gtgaacccag gtgtcctccc gccagaccct
     2701 caaggtgatg tggccctggc cgggaatggc ctgcacgctg ttggccagga ggcgctgcaa
     2761 ggcctgggtg agcagctcgg gttcgagccc caccacaggg ttctcgtcga cctgcacgtg
     2821 gaaggcgatg cggcccggca ggtcctgggc gatggcgagg aaggggacca gggcttcccg
     2881 gatggggagg ggctgcgtct ggagcggcac ctggtgggag agggccttga gctgttggac
     2941 ggtgctgccc atggacagcg ccgcctcttc cagccgccag gcgaggtccg gcgcctcatc
     3001 accgggggga aggtgggccc gcaaccgatc caggttgccc aggaccaccg tcagctggtt
     3061 gttgaactcg tgcaccagcc cgccggccag ggtgccgacg gcctccatgc gctgggcctg
     3121 caggtcccgg gtttccaggg ccaggcgggc caggcgggcc tcctcggcag cggctgagga
     3181 cacgaaggcg gcgagggcca gcaccagaag gtggagctgg gagaaacgga aggcctcgtc
     3241 gggcagcacc ggacccaagg tccagagctg ggcgaggaag gccaaggaga gcagggcgac
     3301 accggcggcg gtgtggcggg ggccgaagcg cagggccatc
//
LOCUS       DATGWW010000609         1875 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_123235, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000609 DATGWW010000000
VERSION     DATGWW010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123235"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..835
                     /locus_tag="VK150_08875"
     CDS             <1..835
                     /locus_tag="VK150_08875"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HLP31461.1"
                     /translation="AGARAAGGAGSRWLSPDPSLREVILGTGLARALGASVGSSLTLM
                     STTKDGALNAVDVEVVGLQDLGLRELNDRFLTVSLATASQLLDAGPARSRLSVVLRRP
                     GDTAAEQARIQALLAETSVKPWFELASFYRQVKLLYFAIFGFMGLVLFLVVLLATANT
                     LLMSVMERVREFGVLRAMGLQPGQLLRLLQWEGAFLGLLGSALGLAVTLLLRAGLNAL
                     HLQMPAPPGTSHGYELNIHFVPLVYAIVAAGLQATIQVSALFPGLKAARLRIVEALRH
                     V"
     gene            864..1463
                     /locus_tag="VK150_08880"
     CDS             864..1463
                     /locus_tag="VK150_08880"
                     /inference="COORDINATES: protein motif:HMM:NF016489.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HLP31462.1"
                     /translation="MASAANETERKAPRLTSRLAPRLAWWLATGFGSGHLRPAPGTWG
                     SLAGLAAWLLLVAGLRRTGSPLAPWALLAAPLLLTLLAVWAAQRVVEETGHKDPSFIV
                     IDEWAGLWFALTPLLVTATLQPQPLALWTARLVAPFMLFRLFDIWKPGPVDHAQRLPG
                     GWGVVLDDVLAGLLAALIVWPLDQWLGAHSLRHPELWMR"
     gene            1509..>1875
                     /locus_tag="VK150_08885"
     CDS             1509..>1875
                     /locus_tag="VK150_08885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31463.1"
                     /translation="MRLLAFLLAATGLIAAPPVQVVTASAQVTLGPGVEPRPGDPPFR
                     PRLEAQFTLSGLPKGAKPTFRFWRAAPAAVATLRPGRPIAKGGSGFTPVEGEVTPVAP
                     ARFFQVKAQVPGAWTGPETL"
BASE COUNT          204 a          729 c          650 g          292 t
ORIGIN      
        1 agcgggagcc cgcgccgccg gcggcgcggg ctcccgctgg ctgtccccgg atccttccct
       61 ccgcgaggtg atcctcggca ccggcctggc ccgcgccctg ggcgcctccg tgggcagctc
      121 cctcaccctg atgtccacca cgaaagacgg cgcgctcaac gccgtggatg tcgaggtggt
      181 gggcctccag gacctgggcc tccgcgagct gaacgaccgc ttcctcacgg tgagcctcgc
      241 caccgccagc cagctgctgg acgccggccc ggcccggtcg aggctctcgg tggtgctccg
      301 ccggcccggg gacactgccg cggagcaggc gcggatccag gccctgctgg ccgaaaccag
      361 cgtgaagccc tggttcgagc tggcctcctt ctaccggcag gtgaagctgc tctacttcgc
      421 catcttcggc ttcatgggcc tggtgctctt cctggtggtg ctgctggcca ccgccaacac
      481 gctgctgatg tcggtgatgg agcgggtgcg cgaattcggc gtgctgcggg ccatgggcct
      541 ccagcccgga cagctgctga ggctcctgca gtgggagggc gccttcctcg ggctgctggg
      601 cagcgcgctg ggcctggccg tcacgctgct gctccgcgcc gggctgaacg ccctgcacct
      661 gcagatgccc gccccgccgg gcaccagcca cggctacgag ctgaacatcc acttcgtgcc
      721 gctggtctac gccatcgtgg ctgcgggcct ccaggcgacg atccaggtga gcgccctctt
      781 cccgggcctg aaggccgcgc ggcttcgcat cgtggaagcc ctgcggcacg tctgagccac
      841 gctgacatcc acccggagac accatggcat ccgccgccaa tgagactgag cgcaaggctc
      901 cgcgcctgac ctcgcgcctg gccccgcggc tggcctggtg gctcgccacg gggttcggca
      961 gcggccacct ccgccccgcg ccaggcacct ggggcagcct ggcggggctc gccgcctggc
     1021 tgctgctggt ggccgggctg cggcgcacgg gcagccccct cgcgccctgg gcgctgctgg
     1081 cggcgcccct cctgctgacg ctgctggccg tctgggccgc ccagcgggtg gtggaggaga
     1141 ccggccacaa ggatccctcc ttcatcgtga tcgacgaatg ggcgggcctc tggttcgcgc
     1201 tcacgcccct cctggtcacg gccacgctcc agccccagcc tctggccctc tggaccgccc
     1261 ggctggtggc gcccttcatg ctgttccggc tcttcgacat ctggaagccg ggccccgtgg
     1321 atcacgccca gcgcctgccc ggcggctggg gcgtggtgct ggatgacgtg ctggcgggcc
     1381 tcctggccgc gctcatcgtc tggcccctgg accagtggct gggggcccac tccctgcgcc
     1441 atcccgaact ctggatgcgg tgagggtccg ccagggccta tgctggaggc ctcctcccaa
     1501 ggtggaccat gcgcctgctt gccttcctcc tcgccgccac cgggctgatc gccgccccgc
     1561 ccgtgcaggt cgtcacggcc tcggcccagg tcaccctcgg gcccggggtg gagccccgcc
     1621 caggcgaccc gccgttccgg ccccggcttg aggcgcagtt caccctcagc ggcctgccca
     1681 agggggccaa gcccacgttc cgcttctggc gggccgcccc ggcggccgtg gccacgctgc
     1741 gcccgggtcg ccccatcgcc aagggcgggt cggggttcac gccggtggaa ggcgaggtca
     1801 cccccgtggc gccggccagg ttcttccagg tcaaggccca ggtgcccggc gcctggactg
     1861 ggcccgagac cctgg
//
LOCUS       DATGWW010000610         4460 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_389588, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000610 DATGWW010000000
VERSION     DATGWW010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4460
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389588"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2061
                     /locus_tag="VK150_08890"
     CDS             <1..2061
                     /locus_tag="VK150_08890"
                     /inference="COORDINATES: protein motif:HMM:TIGR01778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005375 - copper ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_process: GO:0006825 - copper ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent copper receptor"
                     /protein_id="HLP31464.1"
                     /translation="AAEPDSPAEKARATPKAEGSALVEVTAPLPTEPLVTVLDPKVPR
                     QPLPAHDGAEYLKTLPGFTVIRKGGTDGDPVLRGMVGSRLSLLLDGEQILGGCGARMD
                     PPTAYIFPESYDRITVVKGPQTVLYGPGTSAGTVRFERTNARFQRTGVEGFASLMGGS
                     FGRHDEVADVRAGTPSFYVRGIGTRSHADDYQDGQGVSVHSRYTRWSAQAALGWTPDD
                     DTRLELTGARSDGEAAYADRSVDGSKFLRENLGFKGEFRRLSSLVERVEFQVYRNHVD
                     HVMDTYSLRTFIPSMMAPEPAAMNPDRTTTGGRLALELRLRPGTLLTAGLDAQANEHT
                     GRMSMMQWSMPEEYLPRVADARFRNAGIFAEASHALSGKDRLLGGLRLDRWHAEDPRA
                     RVTLTMMMSAANPTAGQHRDETLTSGFLRYERDLATGSTLYAGLGRAERFPDYWEAIT
                     KESLASLSAFGTRPEQTSQVDLGWVKQAGSVRASVSAFYGKVSDFILIQSNVAKPTMT
                     GSRMATVARNIDATTWGGEVAMQAKVLDALSAEGSLAYVRGENETDGSALAQMPPLEA
                     RLDLTWDAHAWSAGLLARGVARQDRIALNQGNIVGQDLGPSAGFGTLSFHAGWRPADG
                     WLLTCGVDNLFDRAYAEHISRNASLVPGYAVQSLRVREPGRNAWLKASFRFGGPGSAV
                     RSDG"
     gene            2072..3361
                     /locus_tag="VK150_08895"
     CDS             2072..3361
                     /locus_tag="VK150_08895"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HLP31465.1"
                     /translation="MTYPSSGIPLTWLLRLRWITAVAQTAAIFVSARLLPDELPVLPL
                     LGLVALGALSNLALMLRLRRPDPVRHALPGLVLGLDILLLTGLLFGSGGPANPFTAIY
                     LVHITLAAVVMRGAWAWGLGLLATAGFGLLFFWNVHIHSLSHMDHGSGDGMSLHLAGM
                     WVAFALTAGLIAAFVGRVTEALRQRDEELAALRDLSARQARLAALTTLAAGVAHELGS
                     PLGTIAVAAKELQRAAEDIGLMGSAFTQDAALIRQEVDRCRRILDQLADPSGTTLGEA
                     FQELSWADLQRELVAGLGEADRIRIAFRWPEAPCGPVPRQGLVRALRALLANALEATP
                     APGAVRLKTACEAGVWRIDIVDEGRGMAPEVLARVGEPFFSTKAAGVGMGLGFFLART
                     FAEQLGGDLTVASAPGEGTRVQMTWPQVAAVVPETHG"
     gene            3354..3893
                     /locus_tag="VK150_08900"
     CDS             3354..3893
                     /locus_tag="VK150_08900"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP31466.1"
                     /translation="MADPRPSLLLVDDDVIYRERLGKALAARGYDVRTAANAAEAMAL
                     AEADSPELAVLDLRMPGESGLELLRRLRALDPTTRVLMLTGYGSIATALEAVRLGAVH
                     YLTKPADVDDILAAFHPDGAFEESAAELETPSLARVEWEHIQRVLGDCEGNLSEAARR
                     LGMHRRSLQRKAARKRPAK"
     gene            4042..>4460
                     /locus_tag="VK150_08905"
     CDS             4042..>4460
                     /locus_tag="VK150_08905"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HLP31467.1"
                     /translation="MPFQPLTQEPEIQRRWLESGAFRAKRSGELRPDSKTFYMLVMLP
                     YPSGRIHMGHVRNYTLGDVTARFRRMRGYEVMHPLGWDSFGLPAENAAIKHGIHPAVW
                     TKANIQEMKGQIQKMGISYDWDREIATCTPEYYRWNQ"
BASE COUNT          662 a         1602 c         1529 g          667 t
ORIGIN      
        1 gcggccgaac cggattcccc cgccgagaaa gcccgcgcca cgccgaaggc cgaaggctcg
       61 gcgctggtgg aggtgaccgc ccccctgccc acggaaccgc tggtcacggt cctggatccc
      121 aaggtgcccc gccagccgct gccggcccat gacggcgcgg agtacttgaa gaccctcccg
      181 ggtttcacgg tgatccgcaa gggcggcacg gacggcgacc cggtacttcg cggcatggtg
      241 gggtcgcgcc tgtccctgct cctggacggg gaacagatcc tgggtggctg cggcgcgcgg
      301 atggacccgc ccaccgccta catcttcccg gaatcctatg accgcatcac cgtggtgaag
      361 ggcccgcaga ccgtgctgta tggccccggg acctccgcgg gcaccgtgcg gttcgagcgc
      421 acgaacgccc ggttccaaag gaccggtgtg gaaggcttcg ccagcctcat gggcggcagc
      481 ttcgggcgcc atgacgaggt ggcggatgtg cgggcgggga ccccttcgtt ctacgtccgc
      541 ggcatcggca cccgctccca cgccgacgac taccaggatg ggcagggcgt gtcggtccat
      601 tcgcggtaca cccgttggag cgcccaggct gccctcggct ggacgccgga tgacgacacc
      661 cgcctggagc tcacgggcgc ccgcagcgat ggcgaggccg cctacgcgga ccgcagtgtg
      721 gacggttcga agttcctgcg ggagaacctg ggtttcaagg gcgaattccg gcggctgtcg
      781 agcctggtgg agcgggtcga attccaggtc taccggaacc atgtggacca cgtcatggac
      841 acttacagcc tgcggacctt catccccagc atgatggcgc ctgagcccgc cgccatgaac
      901 ccggaccgca ccaccaccgg cggccgcctc gccctggaat tgcgcctgcg gcccggcacc
      961 ctgctcacgg ccggcctcga tgcccaggcc aacgagcaca ctggccgcat gagcatgatg
     1021 cagtggtcca tgcccgagga gtacctgccc cgggtggcgg atgcccggtt ccggaacgcc
     1081 gggatcttcg cggaggcgag ccatgcgctc tccgggaagg atcgcctcct gggcggtctg
     1141 cggctggatc ggtggcacgc cgaggacccc cgagcccggg tgaccctcac catgatgatg
     1201 agcgcggcca atcccacagc ggggcagcac cgcgacgaga cgctgaccag cgggttcctc
     1261 cggtacgagc gagacctggc gacgggatcg accctctacg ccggcctcgg ccgggcagaa
     1321 cgattccccg actactggga ggccatcacc aaggagagcc ttgcctccct cagcgccttc
     1381 ggaacccggc ccgaacaaac ctcccaggtg gacctgggct gggtgaagca ggccggatcg
     1441 gtgcgggcct ccgtctcggc cttctacggg aaggtttcgg acttcatcct gatccagtcg
     1501 aacgtggcca agcccaccat gaccggctct cgcatggcca cggtggcgcg taacatcgac
     1561 gcgaccacct ggggtggcga agtggccatg caggcgaagg tcttggatgc gctgagcgcc
     1621 gaagggagcc tcgcctatgt gcggggggag aacgagaccg acgggagcgc gctggcccag
     1681 atgccgcccc tcgaggcccg gctggacctg acctgggacg cccacgcctg gtcggcgggc
     1741 ctcctggcgc ggggcgtggc gaggcaggac cggatcgcgt tgaaccaggg caacatcgtg
     1801 ggccaggacc tcggccccag cgccggattc ggcacccttt cctttcatgc gggctggcgg
     1861 ccggcggatg ggtggctcct cacctgcggc gtggacaacc tgttcgatcg cgcctacgcc
     1921 gagcacatca gccggaacgc gagcctggtg cccggctacg cggtccagtc tctccgcgtc
     1981 cgggaaccgg ggcggaacgc ctggctgaag gcctccttcc ggttcggcgg gcccggttcc
     2041 gccgtccgtt ccgatggata atggcggttc catgacctat cccagttccg gcattccgct
     2101 cacctggctg ctccggctgc gctggatcac cgccgtggcg cagacggcgg cgatcttcgt
     2161 gtcggcccgg ctgctgcccg acgaactgcc ggtgctgccc ctgctgggcc tcgtggcctt
     2221 gggggcgctg agcaacctgg cgctgatgct ccgccttcgc aggcctgacc cggtccgtca
     2281 cgcgctgccg ggcctcgtcc tcggcctgga catcctcctg ctcacggggc tcctgttcgg
     2341 cagcggcggc cccgcgaacc ccttcacggc catctacctg gtgcatatca ccctggccgc
     2401 cgtggtcatg cgcggcgcct gggcctgggg cctgggcctc ctggccaccg ccggcttcgg
     2461 cctgctcttc ttctggaacg tgcacatcca ttccctgtcc cacatggatc acggaagcgg
     2521 cgacggcatg tcgctgcacc tcgcgggcat gtgggtggcc ttcgccctga ccgccgggct
     2581 catcgcggcc ttcgtgggcc gtgtgaccga ggccctccgc cagcgcgacg aggaattggc
     2641 cgccctgcgc gacctcagtg cccgccaagc gcgcctggcg gccctcacca ccctggccgc
     2701 cggcgtggcc cacgaactgg gctcgcccct gggcaccatc gccgtggccg ccaaggaact
     2761 gcagcgggcc gccgaggaca tcggcctcat gggatcggcc ttcacccagg atgccgcgct
     2821 gatccggcag gaggtggacc gctgccgccg catcctggac cagcttgccg atcccagcgg
     2881 cacgaccctc ggcgaggcct tccaggagct ttcctgggct gatctccagc gagaactggt
     2941 ggcgggactc ggcgaggcgg atcggatccg gatcgccttc cggtggcccg aggccccctg
     3001 cggcccggtg ccccgccagg gtctcgtccg cgccctgagg gccctgctgg ccaatgccct
     3061 ggaggccaca ccagcgccgg gggccgtccg gctcaagacc gcctgcgagg caggcgtctg
     3121 gcgcatcgac atcgtcgacg agggccgcgg catggccccg gaggttctgg cccgggtggg
     3181 cgagcctttt ttcagcacca aggccgcggg agtcggcatg ggcctgggct tcttcctggc
     3241 gcggaccttc gccgagcagc tgggcggaga cctgacggtg gcctcggccc ccggcgaagg
     3301 cacccgggtg cagatgacct ggccccaggt ggccgctgtg gtcccggaaa cccatggctg
     3361 atccgcgccc ctccctgctg ctggtggatg acgacgtcat ctaccgcgag cgcctgggga
     3421 aggccctcgc ggcccggggc tacgatgtgc ggaccgcggc caacgccgcg gaggccatgg
     3481 ccctggcgga agcggacagc ccggaactgg cggtgctgga tctgcgcatg cccggcgaat
     3541 cgggccttga gctgctgcgg cgcctgcgcg ccctggaccc caccacgcgg gtgctgatgc
     3601 tcaccggcta cggcagcatc gccaccgccc tggaagccgt gcgcctaggg gcggtgcact
     3661 acctcacgaa gccggcggac gtggatgaca tcctggcggc gttccatccg gatggggcct
     3721 tcgaggaaag cgccgcggag ctggagacgc cctccctggc gcgggtcgaa tgggagcata
     3781 ttcagcgggt gctgggcgat tgcgaaggca acctctcgga ggccgcccgg cggctgggca
     3841 tgcaccggcg cagcctccag cgcaaggccg cgcggaaacg cccggcgaaa taggatccgc
     3901 cgcatccgcc ggcccgcgcg gaaagccatg gacgacccgt tcatcggaat tcgccccgcc
     3961 ccagccccgg ccccagtcac ggccagggct ggaggcgtgc gtgtttcctt gtagaatcaa
     4021 gggttccgac ggagttcgcc catgcccttc cagcccctga cccaggaacc cgagatccag
     4081 cgccgctggc tcgagtccgg cgccttccgc gccaagcggt ccggagagct gcggccggat
     4141 tcgaagacct tctacatgct ggtgatgctg ccctatccca gcggccgcat ccacatgggc
     4201 cacgtgcgca actacaccct gggcgacgtc acggcccggt tccgccgcat gcgcggctac
     4261 gaagtcatgc accccctggg ctgggacagc ttcggcctgc cggcggagaa cgccgccatc
     4321 aagcacggca tccaccccgc cgtgtggacc aaggccaata tccaggagat gaagggccag
     4381 atccagaaga tgggcatcag ctatgactgg gatcgcgaga tcgccacctg tacgcccgag
     4441 tactaccgct ggaaccagtg
//
LOCUS       DATGWW010000611         3986 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_123647, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000611 DATGWW010000000
VERSION     DATGWW010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3986
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123647"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..544)
                     /locus_tag="VK150_08910"
     CDS             complement(<1..544)
                     /locus_tag="VK150_08910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31468.1"
                     /translation="MSPLLILRVHADLRLGLGHVARAIALQEAWRALGGEACIAVSGD
                     DRARRVGGGTHPFLDQPLPCATHDLGTDLYAPLPADLKTRGAVVLVDQWDTTAAFLQG
                     LRPLKVAVMEDDTDAHESADLLFQPYLEGVRWPDHPVKVVGGRKVRPFETMSGACRVV
                     RGSLFITVDKTALELRPKRMP"
     gene            647..1366
                     /locus_tag="VK150_08915"
     CDS             647..1366
                     /locus_tag="VK150_08915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31469.1"
                     /translation="MSDAFLTPAPGAKAAKTCGILAIVFALTCVGIPVAIVLGIVALI
                     QHGKAKRLAKAQPEAYLPVPATGLVTGIIGLVLPVLMLPVVGITSAIAIPALLAQRER
                     AREVAVKANLEKARVQAEAALQAMQAKAPGQVPSQDAILQALATDPVLLALRNPVTPT
                     APAFQRGQSGPSGTVMIYADQQQEGGVTIWSLQFRAVVRRGGHDQTLEGELITHTQEQ
                     VQGRTEDGWDVVQAPAEPPQS"
     gene            complement(1404..1985)
                     /locus_tag="VK150_08920"
     CDS             complement(1404..1985)
                     /locus_tag="VK150_08920"
                     /inference="COORDINATES: protein motif:HMM:NF012360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HLP31470.1"
                     /translation="MIRPFQGMVPKLGSRVFVPDSALVLGDVSIGDDASIWFNCAIRG
                     DVNWISIGARTNIQDACCLHVTNRKWPLLIEEEVSIAHNVMLHGCTIRKGALIGMSTT
                     IMDGAEIGEGCLVAAGSLVREGFKAPPHTLVAGWPAVVKGPLSEDQRQLAGNVWGRYV
                     RYKEAYFADGWPIAEAPRIEAPQPGFAEGHPYP"
     gene            complement(2023..2994)
                     /locus_tag="VK150_08925"
     CDS             complement(2023..2994)
                     /locus_tag="VK150_08925"
                     /inference="COORDINATES: protein motif:HMM:NF015558.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HLP31471.1"
                     /translation="MASSAFAPRIPAALLVLGGLLALAPFTPAAAALVGGALLALTVG
                     NPAQAFTRQWTHRLLPLAVVGLGADMNLKAVARAGLHGLGYTALSIVLVLALGWWLAR
                     WMKVAGDTGLLISVGTAICGGSAIAAVAPVLRAKEHEISVALATVFLLNAAALVIFPP
                     LGHAAGLGQEAFGLWSALAIHDTSSVVGAGLAYGPRALEVATTVKLARALWIVPLTMA
                     IGWWVARQATVSADAPPVKKPWFIAGFLVVAALVTFAPALQAPGHLVAVAARRLLVLT
                     LFLIGAGLGREALRSVGLRPFLQGLVLWLIVGALGLGAVKAGLLTVG"
     gene            3015..>3986
                     /locus_tag="VK150_08930"
     CDS             3015..>3986
                     /locus_tag="VK150_08930"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLP31472.1"
                     /translation="MTDQLIPTRRAFPADDPIFALNAEAQARKQAGEAVLNATVGALL
                     DDAGQLVVLDSVMDLWRQLGALEVAPYAPIAGDPAFLKALVQRHWPLLASAGAACATP
                     GGSGALALSLRNFLERGQTLLTTAPYWGPYATLAAENGIHLATAPWPGAGEGLDVAAW
                     DAALRHLMKAQGRVMVWLNDPCHNPTGRSLSPADRAALLGLLRDASALGPVTLLLDFA
                     YLDYTQEPGAVAAALADYAALGTEGQMLVGASLSLSKSMTLYGARCGALAFPWNDDAA
                     LQAALNQSCRGTWSNCARAPQALMLRLARDGKAQARLAEEHRHWSDVL"
BASE COUNT          585 a         1443 c         1447 g          511 t
ORIGIN      
        1 ggggcatccg cttggggcgc agctccaggg cggtcttgtc cacggtgatg aagagggagc
       61 cgcgcaccac gcggcaggcg cccgacatgg tctcgaaggg cctcaccttg cggccgccca
      121 ccaccttcac cgggtggtcg ggccagcgga cgccctcgag gtagggctgg aagagcaggt
      181 cggcggattc atgggcgtcg gtgtcgtcct ccatcaccgc gaccttgagg gggcgcaggc
      241 cctggaggaa cgccgccgtg gtgtcccact ggtccaccag gaccacggcg ccccgggtct
      301 tgaggtccgc gggcaggggg gcgtagaggt ccgtcccgag gtcgtgcgtg gcgcagggca
      361 agggctggtc caggaatgga tgggtgccgc cgcccacccg gcgggcacgg tcatcgcccg
      421 agaccgcgat gcaggcctcg ccgcccaggg cgcgccaggc ctcctgcagg gcgatggcgc
      481 gggccacatg gcccagcccg aggcgcagat cggcgtgcac gcggagaatc agcagggggg
      541 acatgatccg gagagtctaa ccgtccccgc aagggaaggg gaggggggga tcctggcggg
      601 gacgggcgcg tctgtggaat gctggtccca tcccctggag atccccatgt ccgatgcctt
      661 cctgacgccc gcgcccggcg ccaaggccgc gaaaacctgc ggcatcctcg ccatcgtctt
      721 cgcgctcacc tgcgtgggga ttcccgtggc catcgtcctg ggcatcgtgg ccctgatcca
      781 gcacggcaag gcgaagcgcc tggccaaggc tcagcccgag gcctatctgc cggtgcccgc
      841 cacgggcctg gtcacgggca tcatcggcct ggtgctgccg gtgctgatgc tgccggtggt
      901 gggcatcacc agcgccatcg ccatccccgc cctcctcgcc caacgggagc gagcgcggga
      961 ggtggccgtg aaggccaacc tggagaaggc ccgcgtgcag gccgaggccg cgctgcaggc
     1021 catgcaggcc aaggcgccgg gccaggtccc ctcccaggac gccatcctcc aggccctcgc
     1081 cacggacccg gtgctcctgg ccctgcggaa cccggtgacg cccacggcgc ccgccttcca
     1141 gcggggccag tcgggcccct ctggcacggt gatgatctac gcggaccagc agcaggaggg
     1201 cggcgtcacc atctggtcgc tgcagttccg agccgtggtg cggcggggcg gccatgacca
     1261 gaccctggag ggcgagctga tcacccacac gcaggagcag gtccagggcc gcaccgagga
     1321 cggctgggac gtggtgcagg ccccggcgga accgccccag tcctgacccg gatcccgcgt
     1381 cagggcccgc gtcagggcct gcgtcagggg taggggtgcc cctcggcgaa gcccggctgc
     1441 ggcgcctcga tccggggcgc ctcggcgatg ggccagccgt cggcgaaata ggcctctttg
     1501 tagcgcacat aacggcccca gacgttgccg gcgagctggc gctggtcctc gctgaggggg
     1561 cccttcacca cggcgggcca gccggccacc agggtatggg gcggcgcctt gaacccttcg
     1621 cgcaccaggc tgccagcagc cacgaggcag ccctcgccga tctcggcgcc gtccatgatg
     1681 gtggtgctca tgccgatgag ggcgcccttg cggatggtgc agccgtgcag catcacgttg
     1741 tgggcgatgc tcacctcctc ctcgatgagg aggggccact tccggttggt cacatgcagg
     1801 cagcaggcat cctggatgtt ggtgcgcgcg ccgatggaaa tccagttcac gtcaccgcgg
     1861 atggcgcagt tgaaccagat gctggcgtcg tcgccgatgc tcacgtcgcc cagcaccagg
     1921 gcgctgtcgg gcacgaacac gcgcgaaccg agcttcggaa ccatgccttg gaaggggcgg
     1981 atcatgggca ttctccagcc ggagagtcta ccccaccatg cctcagccca ctgtcagcag
     2041 gccggccttc acggcgccga ggccgagcgc gcccacgatg agccacagca ccaggccctg
     2101 caggaagggc cgcagcccta cgctgcgcag ggcctcccgg ccgagtcccg cgccgatgag
     2161 gaagagggtg agcaccagca ggcgccgggc ggccaccgcc acgaggtggc cgggcgcctg
     2221 cagggcgggc gcgaaggtga ccagggcagc cacgacgagg aagcccgcga tgaaccaggg
     2281 cttcttcacc ggcggcgcgt cggcggaaac cgtggcctgc cgcgccaccc accagccgat
     2341 ggccatggtg aggggcacga tccacagggc ccgcgccagc ttcacggtgg tggccacctc
     2401 cagggcccgg gggccgtagg ccagtcccgc gcccaccacg gagctggtgt cgtggatggc
     2461 cagggccgac cagaggccga aagcctcctg gcccagcccc gcggcgtggc cgaggggcgg
     2521 gaagatcacc agcgcggcgg cgttgaggag gaacaccgtg gccagcgcca cggagatctc
     2581 gtgctctttc gcccgcagca ccggcgccac ggcggcgatg gcgctgccgc cgcagatggc
     2641 ggtgcccacg gagatcagca ggcccgtgtc gcccgccacc ttcatccagc gggcgagcca
     2701 ccagcccagg gccagcacca ggacaatgct cagcgcggtg tagcccaggc cgtgcagacc
     2761 cgcgcgggcc acggctttca ggttcatgtc cgcgccgagg cccaccacgg ccaggggcag
     2821 cagccgatgc gtccactgtc gcgtgaaggc ctgggccggg ttgcccaccg tcaacgccag
     2881 cagggcgccg cccaccagcg ccgcggctgc cggcgtgaag ggcgccagtg cgagaaggcc
     2941 gcccaggacc aggagggcgg cgggaatgcg gggtgcgaat gcagacgatg ccatccttca
     3001 gggtaccctg gggcatgacc gaccagctca tccccacccg gcgcgccttc ccggcggacg
     3061 atcccatctt cgcgctgaac gccgaggccc aggcccgcaa gcaggccggc gaggcggtgc
     3121 tgaacgccac cgtgggcgcc ctgctcgacg acgcggggca gctggtggtg ctggattccg
     3181 tcatggacct gtggcggcag ctgggcgccc tggaggtggc cccgtacgcg cccatcgccg
     3241 gcgatcccgc ctttctgaaa gccctcgtcc agcgccactg gccgctgctg gcctccgccg
     3301 gcgccgcctg cgccacgccc ggcggcagcg gggccctggc cctgtcgctg cgcaacttcc
     3361 tggagcgcgg ccagaccctg ctcaccacgg cgccctactg gggaccctac gccaccctgg
     3421 ccgccgagaa cggcatccac ctggcgacgg cgccctggcc cggggcgggc gaggggctgg
     3481 acgtggcggc ctgggatgcg gcgctgcgtc atctgatgaa ggcccagggc cgggtgatgg
     3541 tctggctcaa tgatccctgc cacaacccga cggggcgcag cctctcgccg gcggaccgcg
     3601 ccgcgctcct gggcctgctg cgcgacgcct cggccctcgg acccgtcacg ctgctgctgg
     3661 acttcgccta cctggactac acgcaggaac ccggggccgt ggccgcggcg ctggccgact
     3721 acgccgccct ggggaccgag ggccagatgc tggtgggggc ttcgctctcc ctgtcgaaat
     3781 cgatgacgct ctacggcgcg cgctgcggcg ccctggcctt cccctggaac gatgacgcgg
     3841 ccctgcaggc cgccctcaac cagtcctgcc ggggcacctg gtccaactgc gcccgggccc
     3901 cccaggcgct gatgctgcgg ctggcgcggg acggcaaggc ccaggcccgg ctggcggagg
     3961 agcaccggca ctggtcggat gtgctc
//
LOCUS       DATGWW010000612         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_124049, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000612 DATGWW010000000
VERSION     DATGWW010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124049"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..438)
                     /locus_tag="VK150_08935"
     CDS             complement(<1..438)
                     /locus_tag="VK150_08935"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HLP31473.1"
                     /translation="MNRKAIYYILLPVAVIAGAATFHRSRRNNELNHQATVKAEGSVA
                     VTLVPVQERTFRSAVAFTGTLLAVNRAELKAEVAGRVTRVAVQEGDTVAAGALLGAQD
                     EDDYVLGVQAAEAQVAQAKAQALQAQRDNDRAVALLEKRSITRQ"
     gene            complement(539..>1634)
                     /locus_tag="VK150_08940"
     CDS             complement(539..>1634)
                     /locus_tag="VK150_08940"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HLP31474.1"
                     /translation="DFTRLRDVSILNSGFADSAAAFGLSPSSLVGARSIYTSQANLTQ
                     PLFYWGKLGTAIDIAKMGEREATFAFTTSELDVLHGVAKAYLGVLSAQAEREVIETRR
                     KTAEQFVSDVKAKLEAQSATELDRLRAESELLAVIPEALQADAQVKRAMEVLNGQLGL
                     DPKAPLALAPLGQPEAGPKPPGAERSELAQLRQQEAMYRANEKIITSDLRPKFDLSAS
                     YGYQAGKSDNLFKEPYDTWKVSVTMKFPVFDGLRSSGKRAQNTAQLEQVKQARIDRER
                     SVAIEQSTADRELEKAIALDEAARKAHDAALEALRMSRESFDQGLITSLDLLQAERAE
                     RQAESQRRRAELGLWSARFDQRRSLGLPPL"
BASE COUNT          208 a          541 c          608 g          277 t
ORIGIN      
        1 ctgccgggtg atgctgcgct tctcgagcag cgccaccgcg cggtcgttgt cgcgctgggc
       61 ctggagggcc tgggccttgg cctgggccac ctgggcctcc gcggcctgga cgcccagcac
      121 gtagtcgtcc tcgtcctgcg cacccagcag ggcgccggcg gcgaccgtgt cgccctcctg
      181 caccgccacg cgggtcacgc ggccggccac ttcagccttc agctcggcgc ggttcaccgc
      241 cagcagggtg cccgtgaagg ccacggcgga acggaaggtc cgctcctgga cgggcaccag
      301 ggtgaccgcc accgagcctt cggccttcac ggtggcctgg tggttcagct cgttgttgcg
      361 cctgctgcgg tggaaggtgg cggcgccggc gatgacggcg acgggcagga ggatgtagta
      421 gatggctttt cggttcatgg tcaactccag ggaatgccgg tcgggatcgg agcgggcatc
      481 aggcgccgcc tgaggcgggg tggggattcc aggaaggggc gatccttccc ggcgcaggtc
      541 aaagcggggg caggccgagg gaccggcgct ggtcgaagcg ggcggaccac aggcccagct
      601 ccgcgcggcg gcgctggctc tcggcctgcc gctcggcacg ttcggcctgc aggaggtcga
      661 gcgacgtgat gaggccctgg tcgaaggatt ctcggctcat gcgcagggcc tcaagcgcgg
      721 cgtcgtgggc cttccgggcc gcttcatcga gggcgatggc cttctccagc tcgcggtccg
      781 cggtgctctg ctcgatggcc acggaacgct cccggtcgat gcgggcctgc ttcacctgct
      841 cgagctgggc ggtgttctgg gcccgcttgc ccgagctgcg cagcccgtca aagacgggga
      901 acttcatcgt gacactcacc ttccaggtgt cgtagggctc cttgaacagg ttgtccgact
      961 tgccggcctg gtagccgtag ctggcgctga ggtcgaactt gggacgcagg tccgaggtga
     1021 tgatcttctc gttggcccgg tacatcgcct cctgctgcct cagctgggcg agctcgctgc
     1081 gctcggcgcc tgggggcttc gggcccgcct cgggctggcc caagggcgcc agggcgaggg
     1141 gagccttggg atccagcccc agctggccgt tcagcacctc catggcccgc ttcacctggg
     1201 cgtcggcctg cagggcctcc gggatcacgg cgagcagctc gctttcggcc cgcaggcggt
     1261 ccagctccgt ggccgattgg gcctcgagct tggccttcac gtccgaaacg aactgctcgg
     1321 ccgtcttgcg ccgcgtctcg atgacctccc gctccgcctg ggccgacagg acgcccaggt
     1381 aggccttggc caccccgtgc agaacgtcca gctcggaggt ggtgaaggcg aaggtggcct
     1441 cccgctcgcc catcttggcg atgtcgatgg cggtgccgag cttgccccag tagaagaggg
     1501 gctgggtgag gttcgcctgg ctggtgtaga tgctgcgggc ccccaccagg gaggacggtg
     1561 acagcccgaa ggccgcggcg ctgtcggcga agccgctgtt gaggatcgag acgtcgcgca
     1621 ggcgggtgaa gtcg
//
LOCUS       DATGWW010000613         1605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_124186, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000613 DATGWW010000000
VERSION     DATGWW010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124186"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..257
                     /locus_tag="VK150_08945"
     CDS             <1..257
                     /locus_tag="VK150_08945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31475.1"
                     /translation="PPPSPLPSQPAGQTPPWRNDLTDAALRVCPALAEVRDALLGTGG
                     EPLLCGSGSCWAARYHLPALRDAAAQALGTSHPAWGLWRT"
     gene            307..1227
                     /locus_tag="VK150_08950"
     CDS             307..1227
                     /locus_tag="VK150_08950"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLP31476.1"
                     /translation="MAPSALRIRGLRKAFPKVVAVDGVDLDVARGEVFGLLGPNGAGK
                     TTTLEIIEGITRADSGDIEILGLTWAEHGREIRARIGVQLQSTSLFNKITPREALELY
                     GAYYPKSRSAADLLALVQLEEKADAYHITLSGGQQQRLALALALVNDPELVFLDEPTT
                     GLDPQARRSLWDVVRRMKGEGRTVVLTTHYMDEAEALCDRLAIMDHGQVIATGTPASL
                     IADLAIPSVVELTFEGAAPDPAAFAAKLDQAVERRLDLWEIPTPDPKALLPRLLEAAE
                     AAAVPFQQVHVRRATLEDVFLHRTGRSLRE"
     gene            1230..>1605
                     /locus_tag="VK150_08955"
     CDS             1230..>1605
                     /locus_tag="VK150_08955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31477.1"
                     /translation="MLLWRQFAMEWRLYSRDRVAMFWTFAFPVILLVGFGTIFRDGGG
                     PRLSVVRVQSPAPSPADAALDQALTDLQLKVLTLPKAEAEARWSKGETAAQLEPSEGP
                     GYRLRLNSYLMAQAGATAGLVNQ"
BASE COUNT          217 a          621 c          538 g          229 t
ORIGIN      
        1 accccccgcc gtcacccctg ccctcccagc ccgcgggcca gacgccgccc tggcggaacg
       61 acctgaccga cgccgccctg cgggtgtgcc cggccctggc cgaggtgcgc gatgccctgc
      121 tcggcaccgg cggcgagccc ctgctctgcg gatccggcag ctgctgggcc gcgcggtatc
      181 accttcccgc cctccgggac gcggcggccc aggccctggg cacctcccac cccgcctggg
      241 gcctctggcg gacctgaccc tgttccgaca ggttcctccg tggtattcgt ggcatccgag
      301 gtttccatgg ctccttccgc cctccgcatc cgcgggctcc gcaaggcctt ccccaaagtc
      361 gtggcggtcg atggcgtgga cctcgacgtg gcccggggcg aggtcttcgg gcttctgggg
      421 cccaacggcg cgggcaagac caccacgctg gagatcatcg agggcatcac ccgggccgac
      481 tcgggcgaca tcgagatcct cggcctgacc tgggccgagc acggccggga gatccgggcc
      541 cgcatcggcg tgcagctcca gagcaccagc ctcttcaaca agatcacccc gcgggaggcc
      601 cttgagctct acggcgccta ctacccgaaa tcccgcagcg ccgcggacct cctggccctc
      661 gtgcagctgg aggagaaggc cgacgcctac cacatcaccc tcagcggcgg gcagcagcag
      721 cggctggccc tggcgctggc cctggtgaac gatcccgagc tggtcttcct ggacgagccc
      781 accacgggcc tcgatcccca ggcccggcgc agcctctggg acgtggtgcg gcgcatgaag
      841 ggcgagggcc gcacggtggt gctgaccacc cactacatgg acgaggcgga ggccctctgc
      901 gaccgcctgg ccatcatgga ccacggccag gtcatcgcca cgggcacccc ggcctccctc
      961 atcgcggacc tggccattcc cagcgtggtg gagctcacct tcgaaggcgc cgccccggat
     1021 cccgcggcct tcgccgcgaa gctcgaccag gcggtggagc ggcgcctcga cctctgggag
     1081 atccccaccc cggatcccaa ggccctgctg ccgcgccttc tggaagccgc ggaggcggcg
     1141 gccgtcccct tccagcaggt ccatgtccgc cgggccacgc tggaggatgt ctttctgcat
     1201 cgcacgggcc ggagcctgag ggagtgacca tgctgctctg gaggcaattc gccatggaat
     1261 ggcggctcta cagccgcgac cgggtggcca tgttctggac cttcgccttc ccggtgatcc
     1321 tgctcgtggg cttcggcacc atcttccggg acgggggcgg gccccggctc tccgtggtgc
     1381 gcgtgcagtc gccggccccc tctcccgcgg acgcggcgct ggaccaggcc ctcaccgacc
     1441 tgcagctcaa ggtgctgacc ctgccgaagg ccgaggccga ggcccgctgg tcgaaggggg
     1501 agaccgccgc ccagctggag ccctccgagg gcccgggcta ccggctgcgg ctgaacagct
     1561 acctcatggc ccaggccggc gccaccgccg ggttggtgaa ccagg
//
LOCUS       DATGWW010000614         2434 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_390426, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000614 DATGWW010000000
VERSION     DATGWW010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2434
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390426"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1949)
                     /locus_tag="VK150_08960"
     CDS             complement(<1..1949)
                     /locus_tag="VK150_08960"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT domain-containing protein"
                     /protein_id="HLP31478.1"
                     /translation="MSSRRSTTALLACCAGLAVCVQGDAQARSRPQVVRPEAARPGES
                     PDATLSPYFFVKGDGTAVDQLPLKSTSAKVAIAGVIADVKVTQVYRNTGTKALEAIYV
                     FPGSTRSAVHGMTMTIGQRVLKAQIKERGQARADYEQAKAQGRSASLLEQQRPNVFQM
                     NVANILPGDEIRVELAYTELLVPTDGTYAFVYPTVVGPRYAGKAGTDSATGEPWVANP
                     YTHAGEKPATTLDLELKLSAGLPIQRMACDTHKTSIAYDGRAEATLRLDPSEAHGGNR
                     DVIVKYQLAGGAVQSGLLLDQARDSAGGENTFLLMAQPPKRVSPKDLPPREYVFIMDV
                     SGSQMGFPIEMSKELMKEMIQGLRPQDLFNVMVFEGSAALWSPSGSLHATPENARQAL
                     AFVRSQNGGGGTELGSAMRKALGLPRVPGISRTFVVSTDGYISADGQVFDIIRKNLGS
                     ANLFTFGIGTSVNRHLIEGMAHAGQGEAFVITRPEQAAAEAERFRAYVSSPVLTNLKL
                     TTHGFHIQDLEPIQLPDVLADRPVICLGKWTGAAQGTVTLSGVSGAGPWSQTFEVGQV
                     KGRQHPALRQLWARQRIQMLSDYDQFGEDAGRKAEVTRLGLAYSLLTAHTSFVAVDTQ
                     VRATGGSTTVTQPLPLPEGVSDAAVG"
     gene            complement(2021..>2434)
                     /locus_tag="VK150_08965"
     CDS             complement(2021..>2434)
                     /locus_tag="VK150_08965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31479.1"
                     /translation="PAQAFVSTPESAPAAKKLKAARGVTSEEASRPAEPAWTLEPLPD
                     GLTRVTVIAPGRPQPLLLKRGAAGIEVIRLQADPGARGAAPAWVAQVRLAVGDTLDLY
                     LLETPVSDPARLPETGPVDGYRARIHPPARKGPER"
BASE COUNT          322 a          826 c          912 g          374 t
ORIGIN      
        1 cccacggccg cgtcggacac gccctccggc aggggcaggg gctgggtcac cgtggtgctg
       61 ccgccggtgg cgcggacctg ggtgtccacc gccacgaagg aagtgtgggc ggtgagcagg
      121 ctgtaggcga ggcccaggcg agtgacctcg gccttccggc ccgcatcctc gccgaactgg
      181 tcgtagtccg aaagcatctg gatgcgctgg cgggcccaga gctggcgcag cgcggggtgc
      241 tgccggccct tcacctggcc gacctcgaag gtctggctcc agggccccgc gccgctcacg
      301 ccgctgaggg tcaccgtgcc ctgggccgcg ccggtccact tgccgaggca gatcaccggg
      361 cggtcggcca gcacgtcggg cagctggatg ggctccagat cctggatgtg gaagccgtgg
      421 gtggtgagct tcaggttggt gagcacgggc gacgacacgt acgcccggaa ccgctcggcc
      481 tcggcggccg cctgctcggg ccgcgtgatg acgaaggcct cgccctgccc cgcgtgggcc
      541 atgccctcga tgaggtggcg gttgacggag gtgccgatgc cgaaggtgaa gaggttggcc
      601 gagcccaggt tcttccggat gatgtcgaat acctggccgt cggcgctgat gtagccatcc
      661 gtggagacca cgaaggtgcg cgagatgccc ggcacccggg gcaggcccag ggccttgcgc
      721 atggcgctgc ccagctctgt gcccccgccc ccgttttgcg accgcacgaa ggccagggcc
      781 tggcgcgcat tctccggcgt ggcgtgcagg gagcccgagg gcgaccacag ggcggcgctg
      841 ccctcgaaga ccatcacgtt gaagagatcc tggggccgca ggccctggat catctccttc
      901 atgagctcct tggacatctc gatggggaag cccatctggc tgccggagac atccatgatg
      961 aacacgtatt cgcggggcgg caggtccttg ggcgacacgc gcttcggcgg ctgagccatg
     1021 agcaggaagg tgttctcgcc gccagccgaa tcgcgggcct ggtcgagcag caggcccgac
     1081 tgcacggcac cgcccgccag ctggtacttc acgatgacgt cgcggttgcc gccgtgggcc
     1141 tcggagggat cgaggcgcag cgtggcctcg gccctgccgt cgtaggcgat ggaggtcttg
     1201 tgggtgtcgc aggccatgcg ctggatgggg aggcccgccg acagcttcag ctccaggtcg
     1261 agggtggtgg ccggcttctc gcccgcgtgg gtgtacgggt tcgccaccca gggctcgccc
     1321 gtggccgagt cggtgccggc cttcccggcg tatcgagggc caaccacggt ggggtagacg
     1381 aaggcgtacg tgccgtccgt gggcaccagc agctcggtgt aggcgagctc cacccggatc
     1441 tcgtcgccgg gcaggatgtt cgccacgttc atctggaaga cgttgggccg ctgctgctcc
     1501 agcagcgagg cgctgcggcc ctgggccttg gcctgctcgt agtccgcccg ggcctggccg
     1561 cgctccttga tctgcgcctt cagcacccgc tggccgatgg tcatggtcat gccgtggacc
     1621 gctgaccggg tcgagcccgg gaacacgtag atcgcctcca gcgccttcgt gcccgtgttg
     1681 cggtagacct gggtgacctt cacatcggcg atgacgccgg cgatggccac cttggccgag
     1741 gtggacttca gcgggagctg gtccacggcg gtcccgtcgc ccttcacgaa gaagtaggga
     1801 gagagggttg catccggtga ttcacccggg cgggccgcct ccgggcgcac cacctggggg
     1861 cggctccgcg cctgggcgtc cccctggacg cacacggcga gcccggcgca gcaggcgaga
     1921 agggcggtgg tggagcggcg cgacgacatg ggttcctccc gggtgggccg cgccgggatg
     1981 gcgcggttca ggagggaatg tcccgggcct caggttcctt tcaccgctcc ggaccttttc
     2041 tcgccggagg gtggatccgc gcccggtacc cgtccacggg gcccgtttcc ggcaggcgcg
     2101 ccgggtcgga gaccggcgtc tccagcaggt agaggtccag cgtgtcgccc accgccagac
     2161 gcacctgggc cacccaggcc ggagcggccc cccgcgcccc ggggtcggcc tgcagccgga
     2221 tgacctcgat ccccgcggca ccccgcttca ggagcagcgg ctgcggacgc cccggggcga
     2281 tcacggtcac gcgggtcaga ccgtcgggga gcggttccag ggtccaggcg ggctcggcgg
     2341 gccgcgacgc ctcctcgctg gtcacgcccc gtgcggcctt gagctttttc gccgcgggcg
     2401 cggactccgg ggtggagacg aaagcctggg ccgg
//
LOCUS       DATGWW010000615         3076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_124211, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000615 DATGWW010000000
VERSION     DATGWW010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3076
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124211"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..653)
                     /locus_tag="VK150_08970"
     CDS             complement(<1..653)
                     /locus_tag="VK150_08970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31480.1"
                     /translation="MTPALDPQIVRALTEEDAVERLAAVLDTAPPETDVLARYHWIQE
                     NAQLVQQLEAHILHVQKNPPEEKPKMTHQETLTAMVREIESLVTRAGNALDRASYLDL
                     YQKQNNLRNKAKSFASKHDLEEPVFPAQPVNPFAKKKTPQPAVKIDVHPQPVAPLQES
                     VVEREPEARPYQEPTPQDIAAMLNRPLAFADIDLQDRQLHVRVDLSSMLDGPRSEPPA
                     "
     gene            complement(820..1227)
                     /locus_tag="VK150_08975"
     CDS             complement(820..1227)
                     /locus_tag="VK150_08975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31481.1"
                     /translation="MKHSHKNSAYMRARHRRLEALGLCTHCGKVPSRTNRKTCAECGK
                     VSSIKSAKRVKRIRPAVMALGLCGTCLKREAMPGRHWCAVCSEGNTERAAKLRAKRKA
                     EGRCPRCGKPAVDGRVMCSVCCKARKPNLTQAA"
     gene            complement(1224..1505)
                     /locus_tag="VK150_08980"
     CDS             complement(1224..1505)
                     /locus_tag="VK150_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31482.1"
                     /translation="MTSPRHRKPINTVRFAHPAESLEAIPSVPDAHLEREITALQARL
                     EAHMARRPHWHDINARARWSCEKDALEKDLTMLRRQRECRWRPVEGRTA"
     gene            complement(1502..>3076)
                     /locus_tag="VK150_08985"
     CDS             complement(1502..>3076)
                     /locus_tag="VK150_08985"
                     /inference="COORDINATES: protein motif:HMM:NF012372.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HLP31483.1"
                     /translation="LGMEDHQLVAHAVNHWDLAVAAHGRNLPWVNVHQEDIYEVTAAT
                     YGLDRIHLLWASPSCVHHSRARGGKPREDQQRAHAWEVTDRWLKVAHVDVVLIENVPE
                     FMEWGPLDDAGMPIKDRKGEFFRAWVQGLHDLGYEVDWRVLCAADFGAPTTRRRFFLQ
                     AVRDGKGIHWPEPTHRDPRKGADMFTGHLPTWRTAAECIDWSIPVPSIFGRKRPLAEA
                     TLRRIAAGVVRYVLQGKPFVLNLTHGGRLEPADEPLRTVTTAKRGEKAIVSASIVGVG
                     GRAGQSAPRGLAEPMHTGTTKADSALVAASMVSLRGTSPEQIQATAGSIEAPVPTISA
                     GGGHAGLVAAFLAKHYGGVVGQAADRPLGTVTAVDHHSLVAASLIQTGYGEREGQAPR
                     CLDIQAPLGTVVAEGQKHGLVAAFISHYYGQGVTAQDAGQPLHTVTTLARHGLVTVEI
                     DGETYVITDIGMRMLEPRELAHAMGFPDWYDWSGFTKRDQVKMIGNAVPPPVARALVD
                     AVLRPRPELMGLMEVA"
BASE COUNT          418 a          981 c         1151 g          526 t
ORIGIN      
        1 gcagggggct cggagcgggg cccgtccagc atggaggaca ggtccactcg gacgtggagc
       61 tggcggtcct ggaggtcgat gtccgcgaat gcgagaggcc ggttgagcat ggccgcgatg
      121 tcctgcggcg tgggctcctg gtagggcctg gcttcaggct cgcgctccac cacgctttcc
      181 tgtagcgggg ccaccggctg ggggtggaca tcgatcttca cggccggctg gggagtcttc
      241 ttcttggcga aggggttgac gggctgagcc gggaaaactg gctcctccag gtcgtgcttc
      301 gacgcgaagg acttggcctt gttccgaagg ttgttctgct tctggtagag gtccagatag
      361 ctggccctgt cgagggcgtt cccggccctg gtgacgaggc tctcgatctc gcggaccatg
      421 gcggtgaggg tttcctggtg cgtcatcttg ggcttctcct cgggagggtt cttctggacg
      481 tgcaggatgt gggcctcaag ctgctggacg agctgggcat tctcctggat ccagtggtag
      541 cgggcgagga catcggtttc aggaggggca gtgtcgagga ccgccgccag gcgctccacg
      601 gcatcttcct cggtgagggc ccggacaatc tgagggtcga gggcgggggt catgcgattg
      661 cctcctgggt gggttctgcg gattcggcgg gatattcctc ccagcctggg aaaacatcgg
      721 tggtgtcctg ctggaccagg gcccagcagt ggggcccgaa gagccgctca atggacacgg
      781 gatccttgag ggatcggtgg cacctcaggc agctggccat caggcggcct gggtgaggtt
      841 gggcttgcgg gccttgcagc acacggagca catgacgcgc ccatccacgg cgggcttgcc
      901 gcagcgcggg caccggccct cggccttgcg cttcgccctc agcttggcgg ccctctccgt
      961 gttgccctcg gagcacacgg cgcaccaatg acggcccggc atggcctcgc gcttgaggca
     1021 ggtcccgcag aggcccaggg ccatgacggc gggacggatc cgcttcaccc gcttcgcgga
     1081 cttgatggag gacaccttgc cgcattcggc gcaggtcttc cggttcgtcc tggatgggac
     1141 cttgccgcag tgtgtgcaga ggcccagggc ctccagacgg cggtggcggg cccgcatgta
     1201 ggcggaattc ttatgggagt gcttcatgcc gtcctcccct ccaccgggcg ccaccggcat
     1261 tccctctgcc gacgcagcat ggtcagatcc ttctccaggg cgtccttctc gcaggaccac
     1321 cgggccctgg cgttgatgtc gtgccagtgg gggcgccgcg ccatgtgggc ctccagccgg
     1381 gcctggaggg cggtgatctc gcgctccagg tgggcgtcag ggacggaggg gatggcctcc
     1441 aggctctcgg cggggtgggc gaagcggacg gtgttgatgg gcttgcgatg gcgaggggag
     1501 gtcatgctac ctccatgagg cccatcagct cggggcgcgg gcgcaggacg gcgtccacca
     1561 gggcgcgcgc caccgggggc gggaccgcgt tcccgatcat cttcacctgg tcgcgcttgg
     1621 tgaacccgga ccagtcgtac cagtcgggga accccatggc gtgggccagt tccctgggct
     1681 cgagcatgcg catgccaatg tcggtgatga cgtaggtctc gccgtcgatc tccacggtga
     1741 ccaacccgtg gcgggccagg gtggtgacgg tgtggagggg ctggccggcg tcctgggcgg
     1801 tgacgccttg gccgtagtag tggctgatga aggcggccac cagcccgtgc ttctgcccct
     1861 cggccactac ggtcccaaga ggggcctgga tgtcgaggca ccggggggcc tggccctcgc
     1921 gctccccgta gccggtctgg atgaggctgg cggccaccag gctgtggtgg tccacggccg
     1981 tcacggttcc cagggggcgg tctgcggcct gccccaccac cccgccgtag tgcttggcaa
     2041 ggaaggcggc cacgagcccg gcatgcccac ctccggcgga gatggtcggg accggcgcct
     2101 cgatgctgcc cgccgtggcc tggatctgct ccggggaggt cccgcgcagg ctgaccatgg
     2161 aggccgcgac cagggcgctg tctgccttgg tggtgccggt gtgcatgggc tcggccaggc
     2221 cccggggcgc ggactggccg gcccggcctc cgacgcccac gatggaggcg gaaacgatgg
     2281 ccttctcccc ccgcttggcc gtggtcacgg tgcgcagggg ctcgtccgca ggttccaggc
     2341 ggcccccgtg ggtcaggttg aggacgaagg gcttgccctg aagcacgtag cgcaccaccc
     2401 cagcggcgat ccgccggagg gtggcctcgg caagggggcg cttccgcccg aagatcgagg
     2461 ggaccgggat ggaccagtcg atgcactcgg cagctgtgcg ccaagtgggg aggtgcccgg
     2521 tgaacatgtc cgcgcccttc cggggatccc ggtgggtggg ctcgggccaa tggatgccct
     2581 tgccgtcccg cacggcctgg aggaaaaacc ggcggcgggt ggtgggggcc ccgaagtcgg
     2641 cggcgcacag gacacgccag tccacctcgt agcccaggtc atggaggccc tggacccagg
     2701 cccggaagaa ctcgcccttc cgatccttga tgggcatgcc cgcgtcatcc agtggacccc
     2761 actccatgaa ctcgggcacg ttctcgatca ggaccacgtc cacgtgggcg accttgagcc
     2821 agcggtccgt gacctcccag gcgtgggccc gctgctggtc ctcgcggggc ttgccgcccc
     2881 gggcccggct gtggtggacg cagctgggcg aggcccagag gaggtggatc cgatccaggc
     2941 cgtaggtggc ggccgtgacc tcgtagatgt cctcctggtg gacgttgacc cagggaaggt
     3001 tccggccatg ggcggccacg gccagatccc aatgattcac ggcgtgggcc acaagctggt
     3061 ggtcctccat gcccag
//
LOCUS       DATGWW010000616         3335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_390529, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000616 DATGWW010000000
VERSION     DATGWW010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3335
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390529"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..596
                     /gene="rpsL"
                     /locus_tag="VK150_08990"
     CDS             198..596
                     /gene="rpsL"
                     /locus_tag="VK150_08990"
                     /inference="COORDINATES: protein motif:HMM:TIGR00981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HLP31484.1"
                     /translation="MPTINQLIRLGRKTFQNKTKSPALDACPQKRGVCTRVFTTTPKK
                     PNSALRKVARVRLTNGIECTTYIPGVGHNLQEHSIVLIRGGRVKDLPGVRYHVVRGSL
                     DATGVAGRNQSRSKYGAKRPKAGAAPAKKK"
     gene            609..1079
                     /gene="rpsG"
                     /locus_tag="VK150_08995"
     CDS             609..1079
                     /gene="rpsG"
                     /locus_tag="VK150_08995"
                     /inference="COORDINATES: protein motif:HMM:TIGR01029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HLP31485.1"
                     /translation="MARRSAPAKREILPDPVYNSLVVSKFINVLMERGKKSTAERILY
                     GALEIVAKKSGEEALEAFQKALNNIKPSVEVKSRRVGGATYQVPVEVPQNRRQSLAMR
                     WLKTYSASRGERTMRDKLAGEILDAMNFRGAAIKKKDDVHKMAEANKAFAHFRW"
     gene            1186..3294
                     /gene="fusA"
                     /locus_tag="VK150_09000"
     CDS             1186..3294
                     /gene="fusA"
                     /locus_tag="VK150_09000"
                     /inference="COORDINATES: protein motif:HMM:TIGR00484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HLP31486.1"
                     /translation="MARHTPLERYRNIGIMAHIDAGKTTTTERILYYTGKIHKIGEVH
                     EGAATTDWMVQEQERGITITSAAITAAWTPQTGQLKGVEHRINIIDTPGHVDFTAEVE
                     RSLRVLDGACAVFCAVGGVEPQSETVWRQADKYGVPRMAFVNKMDRPGADFFRVVEMM
                     RTRLKARPMPIQIPIGAEEDFKGVVDLVLMKALTFDEGDKGFKVLYGEIPAELVDTAK
                     EWREKMVEMVAETDDSLMDKYLGGVDLTEDELRNGIRKGCIDLTFTPMMCGSAFKNKG
                     VQPMLDAVVSYMPSPLDIAAIKGVDSDGNEVERKAEDKEPFSALIFKIMADPFVGSLA
                     FIRVYSGVLAAGSGVYNAAKGRRERIGRLLQMHANKREDIEEVRTGDIAAAVGLKEVL
                     TGQTICDENHPVILESMDFPDPVIQVAIEPKTKADQEKMGVALSRLAQEDPTFKVKSD
                     PETNQTIIAGMGELHLEIIVDRMMREFKVEANVGKPMVAYRETIRKRVDAEGKFVRQS
                     GGRGQYGHVKMYVEPNEAGKGYEFINEIKGGVIPKEYIKPIDQGIQEAMQSGVLAGYP
                     CVDIKITIYDGSYHDVDSNEMAFKIAGSMGFKAGCEKASPVILEPIMGVEVVVPEDYM
                     GDVIGNLNSRRGRIENMEDRAGVKVVTAKVPLAEMFAYSTSLRGMTQGRGNYTMQFSH
                     YDEAPRNVAEEIIAKVRGTK"
BASE COUNT          649 a         1137 c         1034 g          515 t
ORIGIN      
        1 ccggcccacc ctggtgatgt ccgcctcatg ttccagttga tgcgttgact ttccaggcca
       61 ttccgatagc ctagatggtt ccggccccgt gggccggcgc aggatttcat ccgtccgacg
      121 ttcccccgac gccccttgtc cagcggaacc tctcgggccc aggcccggat ccaccggcgc
      181 cttccttgga ggatggtgtg cctaccatca atcagttgat ccgcctcggg cggaagacgt
      241 tccagaacaa gaccaagagc cccgcgctcg acgcctgccc gcagaagcgc ggcgtgtgca
      301 cccgcgtgtt caccaccacg ccgaagaagc cgaactcggc cctccgcaag gtggcccgcg
      361 tgcgcctcac caacggcatc gagtgcacga cctacatccc cggcgtgggc cacaacctgc
      421 aggagcacag catcgtgctc atccgcggcg gccgcgtgaa ggatctcccg ggcgtgcgct
      481 accacgtggt ccgcggcagc ctcgacgcca ccggcgtggc gggccgcaac cagtcccgtt
      541 ccaagtacgg cgcgaagcgc cccaaggctg gcgctgcgcc ggccaagaag aagtagggga
      601 ggtcaaacat ggctcgtcgt tccgcccctg ccaagcgtga gatcctgccg gatcccgtct
      661 acaacagcct cgtcgtctcc aagttcatca acgtcctgat ggagcgcggc aagaagtcca
      721 ccgccgagcg catcctctac ggggcgctgg agatcgtggc gaagaagtcc ggcgaggagg
      781 ccctggaggc cttccagaag gccctcaaca acatcaagcc ctcggtggaa gtcaagtccc
      841 gccgcgtggg cggcgccacc taccaggtgc ccgtggaggt tccccagaac cgccgccagt
      901 ccctggccat gcgctggctg aagacctatt ccgcttcccg cggcgagcgc accatgcgcg
      961 acaagctggc tggcgagatc ctggacgcca tgaacttccg cggcgccgcc atcaagaaga
     1021 aggacgatgt ccacaagatg gccgaagcca acaaggcctt cgcgcacttc cgctggtagc
     1081 agtctgtccg accaggagga gccgccgtgc tggcggctcc tcctgcgaag gtctttgaag
     1141 cactccccga cttcgttccc gctttgatcc tttcaggagg ccgcagtggc ccgccacact
     1201 cccctcgagc gctaccggaa catcggcatc atggcgcaca tcgatgccgg caagaccacc
     1261 acgaccgagc gcatcctcta ctacaccggc aagatccaca agatcggcga ggtgcatgag
     1321 ggtgcggcga ccaccgactg gatggtgcag gagcaggagc ggggcatcac catcacctcc
     1381 gccgccatca cggccgcctg gacgcctcag acgggccagc tgaagggtgt ggagcaccgc
     1441 atcaacatca tcgacacccc cggccacgtg gacttcacgg ctgaggtgga gcgctccctg
     1501 cgcgtgctgg acggcgcctg cgccgtgttc tgcgccgtgg gcggcgtgga gccccagtcc
     1561 gagaccgtgt ggcgccaggc cgacaagtac ggcgtgcccc gcatggcctt cgtgaacaag
     1621 atggaccgac ccggcgcgga cttcttccgc gtggtcgaga tgatgcggac ccgcctgaag
     1681 gcgcgtccca tgccgatcca gatccccatc ggggcggaag aggacttcaa gggcgtggtc
     1741 gacctcgtcc tgatgaaggc cctgaccttc gatgagggcg acaagggctt caaggtgctc
     1801 tacggcgaga tccccgcgga gctcgtggat accgccaagg agtggcgcga gaagatggtc
     1861 gagatggtcg ccgagaccga cgactcgctc atggacaagt acctgggcgg cgtcgacctg
     1921 accgaggacg agcttcgcaa cggcatccgc aagggctgca tcgacctcac gttcacgccg
     1981 atgatgtgcg gctccgcctt caagaacaag ggcgtccagc ccatgctcga cgcggtggtg
     2041 agctacatgc cttcgcccct cgacatcgcc gccatcaagg gcgtcgattc cgatggcaac
     2101 gaggttgagc gcaaggccga ggacaaggag ccgttctcgg ccctcatctt caagatcatg
     2161 gccgatccct tcgtgggctc gctggccttc atccgcgtgt attccggcgt tctcgccgcg
     2221 ggctcgggcg tctacaacgc cgccaagggc cgtcgcgagc gcatcggccg cctgctgcag
     2281 atgcacgcca acaagcgtga ggacatcgag gaagtccgca ccggcgacat cgccgccgcc
     2341 gtgggcctca aggaagtgct caccgggcag accatctgcg acgagaacca ccccgtgatc
     2401 ctcgagtcca tggatttccc ggatcccgtg atccaggtgg ccatcgagcc caagaccaag
     2461 gccgaccagg agaagatggg cgtggccctg agccgcctgg cgcaggaaga tcccaccttc
     2521 aaggtgaagt ccgatcccga aaccaaccag accatcatcg ccggtatggg cgagctgcac
     2581 cttgaaatca tcgtcgaccg catgatgcgc gagttcaagg tggaagccaa cgtgggcaag
     2641 cccatggtgg cctaccgcga aaccatccgg aagcgcgtgg atgctgaggg caagttcgtc
     2701 cgtcagtccg gcggccgcgg ccagtacggc cacgtgaaga tgtatgtcga gcccaacgag
     2761 gcgggcaagg gctacgagtt catcaacgag atcaagggcg gcgtgattcc caaggaatac
     2821 atcaagccca tcgaccaggg catccaggag gccatgcagt ccggcgtcct cgcgggctat
     2881 ccctgcgtcg acatcaagat caccatctac gacggcagct accacgacgt ggactccaac
     2941 gaaatggcgt tcaagatcgc gggttccatg ggcttcaagg ccggctgcga gaaggcttcc
     3001 cccgtgatcc tcgaacccat catgggcgtc gaggtcgtgg tccccgagga ctacatgggt
     3061 gatgtcatcg gcaacctgaa cagccgccgt ggccgcatcg agaacatgga agaccgggcc
     3121 ggcgtcaagg tcgtcactgc caaggttccc ctggccgaga tgttcgccta ctccaccagc
     3181 ctgcgcggca tgacccaggg ccgcggcaac tacaccatgc agttcagcca ctacgacgag
     3241 gcgccccgga acgtcgccga ggagatcatc gccaaggtcc gcggcaccaa gtagcaattc
     3301 ccagcctccc cggcccttcg gggccggggg gcatc
//
LOCUS       DATGWW010000617         1651 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_205571, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000617 DATGWW010000000
VERSION     DATGWW010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205571"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..433)
                     /locus_tag="VK150_09005"
     CDS             complement(<1..433)
                     /locus_tag="VK150_09005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31487.1"
                     /translation="MIPWLLTVPILMTQTTPTPLPEVEAKNLPPAARGPMTPVVPDAG
                     ADASPMGQARQGARRGPSISALQLPAGSCRVKDKIPDLSGWRAYAVEVPGGGSIKVHV
                     VEGRKAWFRVLGVNAWGREETGLLQNRIPTGEPQATYKNPGA"
     gene            complement(518..919)
                     /locus_tag="VK150_09010"
     CDS             complement(518..919)
                     /locus_tag="VK150_09010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31488.1"
                     /translation="MTRALPAVTLIALALLGCSKDAKLPPKAYEAALARTASLPEGQD
                     AAISGFQRSLYGSAKYERYYCVDLIAKKSRNDLILVTVYDDTTGTFRPVEGGRLGSGL
                     TLEIEGEVLTPQKTFVWLAVQQPAQPQEPKR"
     gene            complement(1025..>1651)
                     /locus_tag="VK150_09015"
     CDS             complement(1025..>1651)
                     /locus_tag="VK150_09015"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLP31489.1"
                     /translation="RHLAQRGMVAVVADYRVASRHHTGAFEAMADAKSALRWVRQHAA
                     QLGVDPARIAASGGSSGGHLALAAAMFDAFDEPGEDRSVSSKPNALVLFNPALLTAHP
                     NAPGLKALFGERGQEASPLHHVGPGLPPTLILHGKADATVPYVLAERFCAESKKAGNA
                     CELVGYEGAPHGFFNPQAAGGRWHEATLREMDRFLAALGYLPGAATGS"
BASE COUNT          226 a          567 c          597 g          261 t
ORIGIN      
        1 cggcgccagg attcttgtag gtggcttggg gctccccggt gggaatccgg ttctggagca
       61 ggcccgtctc ttcacggccc caggcgttca cgcccagcac ccggaaccag gccttgcggc
      121 cttccaccac gtgcaccttg atgctgccgc ccccgggcac ttccactgcg taggcgcgcc
      181 agccgctgag atcggggatc ttgtccttca ccctgcagct gccggccgga agctgcaggg
      241 ccgagatcga gggaccgcgc cgggcgccct gccgggcctg gcccatgggg ctggcatcag
      301 ccccggcgtc cgggacgacg ggggtcatgg gcccccgggc ggccggggga aggttcttgg
      361 cctccacttc cggcagcggg gtcggagtgg tctgggtcat caggatggga acggtcagca
      421 gccaggggat catgggcacc tccgcccatc agatgccgcc aaccggggcc cggttcgggg
      481 attccgcccc aggaacggtc ggtccatgaa aatgctgcta ccgcttcggt tcttggggct
      541 gagccggctg ctgcaccgcc agccagacga aggttttctg gggcgtcagg acctcccctt
      601 cgatctccag ggtgagtccg ctgccgaggc gcccgccctc cacgggccgg aaggtgcccg
      661 tggtgtcgtc gtagaccgtg accaggatca ggtcgttcct ggatttcttg gcgatgaggt
      721 ccacgcagta gtagcgctcg tacttggcgg aaccgtagag ggatcgctgg aacccgctga
      781 tggcggcatc ctggccttcg gggaggctcg cggtccgggc cagcgccgcc tcgtaggcct
      841 tcggcggcag cttcgcgtcc ttgctgcagc cgaggagggc gagcgcgatc agggtgacgg
      901 cagggagggc tcgggtcatg gggcaccggg aggatcggat cgaaaaccag gcgggtgtgg
      961 ggtgcgaggt tcccagtatc ctcccggatg ccgtccaggg ggccgtgacc ttggcaggcg
     1021 cccttcagct gcccgtggcc gctccaggca gatagcccag tgcggccagg aagcggtcca
     1081 tctcccgcag cgtggcctca tgccatcggc cgccggccgc ctgcgggttg aagaacccgt
     1141 gcggcgcccc ctcgtagccc acgagctcgc aggcgttccc ggccttcttc gattcggcgc
     1201 agaaccgctc cgccagcaca tagggcaccg tggcatccgc cttcccatgc aggatcaggg
     1261 tgggcggcag gcctggcccc acatggtgca ggggcgaagc ctcttggccc cgctcgccga
     1321 agagcgcctt cagccccggg gcgttcggat gggccgtcag gagggccggg ttgaaaagca
     1381 ccagtgcgtt cggcttcgag ctgacggacc gatcctcgcc gggctcgtcg aaggcgtcga
     1441 acatcgcggc ggccagggcc aggtgcccgc ctgaggagcc gcccgatgcc gcgatccgcg
     1501 ccgggtccac ccccagctgg gccgcgtgct gtcgcaccca gcgcagcgcc gacttggcgt
     1561 cggccatggc ctcgaaggcg cccgtgtggt ggcggctggc cacgcggtag tccgcgacca
     1621 ccgccaccat gccgcgctgg gccaggtgcc g
//
LOCUS       DATGWW010000618         2431 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_390739, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000618 DATGWW010000000
VERSION     DATGWW010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390739"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(187..672)
                     /locus_tag="VK150_09020"
     CDS             complement(187..672)
                     /locus_tag="VK150_09020"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HLP31490.1"
                     /translation="MNPSQAQDTYEVEAATRLSRLGAAVVDGLAFAVPGVALAILVPL
                     AMVSGGVGSMMIVLVLAMLILLGLVVTQIVLLVTHGQTIGKRALHIRMITSSGETPSL
                     WRVFFLRWLPFVVGAGVIEMVFKVKGLGNLIHVADALLIFQATRRCLHDLFADTHVIK
                     A"
     gene            917..1867
                     /locus_tag="VK150_09025"
     CDS             917..1867
                     /locus_tag="VK150_09025"
                     /inference="COORDINATES: protein motif:HMM:NF009007.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HLP31491.1"
                     /translation="MGHRKIALLAIGGNALLKEKERGLQEEQLENARETAEMLARVVA
                     EGYALCVVHGNGPQVGNLLIQQEAGSGQIPPYSLDICGAMTQGSMGYMLERMLINRLR
                     FLKIEAPVTSVLTEVVVDKEDKGFQDPTKPVGPFYPEFRALELMRSKRWKMKEDSGRG
                     WRKVVPSPRPMEIVQLEAIKTLLQSGSSVIVGGGGGIPVIRDASGFLVGVEAVIDKDR
                     LSALLAAQLDADLFIILTGVPKVALDFGKPTQVWMDRITASEARRHLAEGQFPAGSMG
                     PKIESALAYLDGGGHEVLITTAEALATEDPATVGTRIVRD"
     gene            1885..2178
                     /locus_tag="VK150_09030"
     CDS             1885..2178
                     /locus_tag="VK150_09030"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HLP31492.1"
                     /translation="MYAMIIVRYRRPLPEVEAVTEAHRAYLRTLQAQGILVASGPLDP
                     RFGGMWLVRVQDENPLADLDTLRDNDPFCQHGLANYELLPWNVMQGKEGLDRI"
     gene            complement(2144..>2431)
                     /locus_tag="VK150_09035"
     CDS             complement(2144..>2431)
                     /locus_tag="VK150_09035"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP31493.1"
                     /translation="TAAEIATRIHSGTPDLIITDYQMPGCNGLTVARMARKANPRLPV
                     LVVTSSHDPDVLAALQHQDVSGILHKPLGEKDLLKAVDASLRSGRGLPSPA"
BASE COUNT          418 a          842 c          805 g          366 t
ORIGIN      
        1 ccctggccga cgccgagggc cacgacggcg tgtggctgca ggtctgggag cagaaccccc
       61 gggcccgccg cttctacgcg aaagcagggt tcaccgaggt gggcgaagcc accttccgcg
      121 tgggcgagca ggtggaccgg gaccgggtgc tggcgcgggg atttccggtc ctgtgaggcc
      181 ttgccatcac gccttgatca cgtgcgtgtc ggcgaagagg tcatgcaggc agcggcgagt
      241 ggcctggaag atcagcaggg cgtccgccac gtggatgagg ttgccgagac ccttcacctt
      301 gaacaccatc tcgatcacgc cggcccccac cacgaagggg agccagcgga ggaagaagac
      361 gcgccagagg ctcggcgtct cgccgctgct ggtgatcatg cggatgtgga gggcccgctt
      421 gccgatggtc tggccgtgcg tgaccagaag gacgatctgc gtgaccacca gacccaggag
      481 aatgagcatg gccaagacca gcacgatcat catcgagccg actccgccgg agaccatggc
      541 cagcggcacg aggatcgcca gggccacgcc gggcacggca aaggccaggc catccaccac
      601 cgccgcgccg aggcggctga ggcgggtcgc cgcttcgacc tcgtaggtat cctgggcctg
      661 ggatggattc atgaccatgc gctccttctt gacagggtgc aaaaggacgg cggccctggc
      721 aaggaatccc tggtccatcc cgcccctctg tgacgcccgt cctttgatcc ccgaccgggg
      781 ccctgtagaa tcctcgtttc ccggggattc cagtgacccg aaccatcgca agcctcgcca
      841 ccacgttgac tccggcctgc gcccggcaga gggccgcgca gggtgaggct ccggccagcc
      901 tcggcgtgcg cccgtgatgg gccaccgcaa gatcgcgctc ctggccatcg ggggcaacgc
      961 cctgctcaaa gagaaggaac gcgggctcca ggaggaacag ctggagaacg cccgggagac
     1021 cgccgagatg ctggcgcgtg tggtggccga aggctacgcg ctctgcgtgg tgcacggcaa
     1081 cgggccccag gtgggcaacc tgctcatcca gcaggaggcc gggtcagggc agatcccgcc
     1141 ctacagcctg gacatctgcg gcgccatgac ccagggctcc atgggctaca tgctggagcg
     1201 catgctcatc aaccgcctcc ggttcctgaa aattgaagcc ccggtcacct cggtcctcac
     1261 ggaagtcgtg gtggacaagg aggacaaggg cttccaggat ccgaccaagc ccgtgggccc
     1321 cttctacccg gaattccgag ccctggagct catgcggtcc aagcgctgga agatgaagga
     1381 ggattccggc cgcgggtggc gcaaggtggt gccctcgccc cggcccatgg agatcgtcca
     1441 gctggaggcc atcaagaccc tcctgcagtc gggcagctcg gtgatcgtcg gcggcggcgg
     1501 cggcattccg gtgatccgcg acgccagcgg cttcctggtc ggggtggagg ctgtcatcga
     1561 caaggaccgc ctcagcgccc tgctcgccgc ccagctcgac gccgacctct tcatcatcct
     1621 cacgggcgtc ccgaaggtcg ccctggattt cggcaagccc acccaggtct ggatggaccg
     1681 catcaccgcc tccgaggccc gcaggcacct ggccgagggc cagttccccg caggcagcat
     1741 gggtcccaag atcgagagcg ccctcgccta cctcgacggt ggcggccacg aggtgctcat
     1801 caccaccgcc gaggcgctgg ccacggaaga tcccgccacc gtgggcaccc ggatcgtgcg
     1861 cgactgaacc gcccaggagt tcccatgtac gccatgatca tcgtccgcta ccgccgcccc
     1921 ctgcccgaag tcgaagcggt cacagaggcc caccgcgcct acctccgcac cctccaggcc
     1981 cagggcatcc tcgtggcctc cgggcccctc gatccccgct tcggaggcat gtggctggtg
     2041 cgggtgcagg acgagaaccc cctggccgac ctggacacgc tgcgcgacaa cgatcccttc
     2101 tgccagcacg gcctcgccaa ctacgagctg ctcccctgga acgtcatgca ggggaaggaa
     2161 ggcctcgacc ggatctgagc gacgcgtcca ccgcctttag cagatccttt tcgccgaggg
     2221 gtttgtggag gatgccgctc acgtcctgat gctgcagggc cgccagcaca tccggatcgt
     2281 ggctggaggt cacgaccagc accggcagcc tcgggttcgc cttccgcgcc atccgcgcca
     2341 cggtcaatcc gttgcagccg ggcatctggt agtccgtgat gatgagatcg ggtgttccgg
     2401 aatggatgcg cgtcgcgatc tccgcagcgg t
//
LOCUS       DATGWW010000619         2600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_160166, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000619 DATGWW010000000
VERSION     DATGWW010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160166"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..462
                     /locus_tag="VK150_09040"
     CDS             106..462
                     /locus_tag="VK150_09040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HLP31494.1"
                     /translation="MAGLELDPHHQQGRRFRLDSFSIPDAARDDFDAAMKRNLAFIRT
                     LPGFRGHVVFEKRVGDSTFNLVTLAAWESQEALDHAGAEVRAFYGRIGFDMAATLQGW
                     GVELVRADYDAPPSLQ"
     gene            complement(485..1030)
                     /locus_tag="VK150_09045"
     CDS             complement(485..1030)
                     /locus_tag="VK150_09045"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HLP31495.1"
                     /translation="MLVEALKAGRGLGLRQLTLRDARPLFALVEANRERLSRWLPWPE
                     ANRSVLDSRAYILLMRKRAQAGLGQSFGLWWKGELVGVAGFTWVDRANRCGAIGYWLA
                     QDAEGYGLMTAAVSALLRHGFRTLKLNRIEIRAGVRNRRSRAIPERLGFRREGILRQV
                     ERLGDRYVDHVVYGLLASTKR"
     gene            complement(1038..1868)
                     /gene="kdsA"
                     /locus_tag="VK150_09050"
     CDS             complement(1038..1868)
                     /gene="kdsA"
                     /locus_tag="VK150_09050"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF003543.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HLP31496.1"
                     /translation="MDFARPFTDQSFFLIAGPCVIESREHAHLMASSLRDLAEARGIP
                     FIYKSSFDKANRTSGGSHRGPGMEGGLDILAEVRSRYGVPVLTDVHESDQCAPAAQAV
                     DVLQIPAFLCRQTDLLVAAAGTGRTVNLKKGQFLAPWDLKHGVEKLKSVEGHGPVWVT
                     ERGSTFGYGNLVVDFQSFPHLRKTGCPVVFDATHSVQKPGALGNATGGAREMIPTLAR
                     AAATCVDGFFFEVHDCPEKAHSDGPNAMRLEQFGDLLDQLLVLWRAGRAAALQDPAGK
                     "
     gene            1986..2501
                     /locus_tag="VK150_09055"
     CDS             1986..2501
                     /locus_tag="VK150_09055"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HLP31497.1"
                     /translation="MAKLLMEDDLNRRLVALLQKDGRMSHAELAERLGVSRPTIIDRV
                     KRLEADGVLGGYAARVTPAAVNKPTVAFVAVRYKDNNEAIEQRFIKALEEEPDILEAH
                     TIAGEDALLLKVVADTPAGIAERLRRIRVLGLMVTTRTTMVLETHWEKAGPSPFPLEN
                     HRAPTGGKKKA"
BASE COUNT          415 a          883 c          901 g          401 t
ORIGIN      
        1 atttcttctt tgaggacgcc cccgagcggg tgctggctca ccttcgcgcc ttcctggccg
       61 gagaagtcct gtccgccacc ggatcgaatc cccaggagaa gtcccatggc cggtcttgag
      121 ctggatcccc accatcagca agggcggcgg ttccgcctgg acagcttctc catccccgat
      181 gcggcgcggg atgatttcga tgcggccatg aaacggaacc tggccttcat ccgcaccctc
      241 cctgggtttc gcggccacgt ggttttcgag aagcgggtcg gagattccac cttcaacttg
      301 gtcaccctcg ccgcgtggga aagccaggag gccctcgacc atgccggggc ggaagtgcgc
      361 gccttttacg ggcgaatcgg ctttgacatg gccgccaccc ttcaagggtg gggcgtggaa
      421 ctggtccgcg ccgactacga cgcgccgcct tcgttgcaat gaagcgccgg ggcttcgtcg
      481 tagctcagcg cttcgttgag gccagcagtc cgtacaccac gtgatccaca tagcgatcac
      541 ccagccgctc gacctggcgg aggatgccct cgcggcggaa ccccaggcgc tcggggatgg
      601 cgcggctgcg gcggttgcgg acgccggcgc ggatctcgat gcggttgagc ttcaaggtgc
      661 ggaagccgtg gcggagcagc gccgagaccg ccgcggtcat cagcccgtat ccttccgcgt
      721 cctgggccag ccaatagccg atggccccgc agcggttggc gcgatctacc caggtgaagc
      781 ccgccacgcc caccagctcg cccttccacc agaggccgaa ggactggccg agacccgcct
      841 gggcccgctt ccgcatgagc aggatgtagg cccgggaatc gaggacgctc cggttggcct
      901 cgggccaggg cagccagcgg ctgagccgct cacggttggc ctccaccagg gcgaacaggg
      961 ggcgcgcgtc gcgaagcgtg agctgccgca gtcccaagcc gcgtccggcc ttcaacgcct
     1021 cgacgagcat ggccacctca cttgccggca ggatcctgca gggccgcggc gcggcccgcg
     1081 cgccagagca cgaggagctg gtcgaggagg tcgccgaact gctcgaggcg catggcgttc
     1141 ggcccgtcgc tgtgggcctt ctcggggcag tcgtgcacct cgaagaagaa gccgtccacg
     1201 caggtggccg cggcccgggc cagggtgggg atcatctccc gggccccgcc ggtggcgttg
     1261 ccgagcgcgc cgggcttctg cacgctgtgg gtggcgtcga agaccaccgg gcagccggtc
     1321 ttgcgcaggt gcgggaagct ctggaaatcc accaccagat tgccgtagcc gaaggtcgac
     1381 ccccgctcgg tgacccacac cgggccgtgg ccctccacgg acttcaactt ttccacaccg
     1441 tgcttcaggt cccagggcgc caggaactgg cccttcttca ggttcacggt gcggcccgtg
     1501 cccgcggcgg cgacgagcag gtccgtctgc cggcagagga aggccggaat ctggagcacg
     1561 tccacggcct gggccgccgg ggcgcactgg tcgctctcat ggacgtccgt caggaccggc
     1621 acgccgtagc ggctacgcac ctccgccagg atgtcgaggc cgccttccat gccggggccg
     1681 cggtggctgc cgccgctggt gcggttggcc ttgtcgaagc tggacttgta gatgaagggg
     1741 atgccccggg cctcggccag gtcgcgcagg ctggaggcca tgaggtgcgc gtgctcccgg
     1801 ctctcgatga cgcagggccc ggcgatgaga aagaagctct ggtccgtgaa gggtcgggcg
     1861 aaatccatgg gcacctcatc acccagttta acgcctcgcc acgacattga cgggttgtca
     1921 cccgacttgt tcattcaact gtcataatgt ccaacgggcc acatttcttt tgtccggagc
     1981 cacccatggc gaagctgctg atggaagacg atctgaaccg gcgcctggtg gcgctgctcc
     2041 agaaggacgg tcgtatgagc cacgcggagc tggccgagcg gctgggcgtg agccggccca
     2101 cgatcatcga ccgggtgaag cgcctggagg ccgacggcgt gctgggcggc tacgccgcac
     2161 gggtcacgcc ggcggcggtg aacaagccca ccgtggcctt cgtggcggtg cgctacaagg
     2221 acaacaacga ggccatcgag cagcgcttca tcaaggcgct ggaggaggag cccgacatcc
     2281 tcgaggccca caccatcgcc ggggaggacg cgctgctgct gaaggtggtg gccgacacgc
     2341 ccgcgggcat cgccgagcgg ctgcgccgca tccgggtgct gggcctcatg gtcaccaccc
     2401 gcaccaccat ggtgctggag acccactggg agaaggcggg gccgagcccc ttccccctgg
     2461 agaaccaccg cgcgccgact ggcggcaaaa agaaggcctg atggatccgc gtcaggaact
     2521 gcccgcgctg gaggggctgc tgtcggaggc gacccgcctg ggcgcggcct tccgggcaag
     2581 cctttccgac aggcccgtga
//
LOCUS       DATGWW010000620         3848 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_124583, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000620 DATGWW010000000
VERSION     DATGWW010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3848
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124583"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..857
                     /locus_tag="VK150_09060"
     CDS             <1..857
                     /locus_tag="VK150_09060"
                     /inference="COORDINATES: protein motif:HMM:NF018290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HLP31498.1"
                     /translation="WCVPHPRGFRDAWFSQRLRDDEGRLMRARVVVLANQKGGVGKTT
                     TAINLAASLAMMEKMVLLVDFDPQGHSTTGLGFAKPDHRAGSYALMKGAPAEALILST
                     EVPMMQVLPAGKDLAQLEFELFELPQLQVLKNGLEPLMDRFDYILIDPPPSLGMITLN
                     ALSAADEVIVPMPCEFFALDGLAELTETLRRIQAGPNPRLKLGGILLTMAEERTNLGA
                     AVANEVRHAFPGKVFQTMIPRNIRLAEAPSHGKPVAFYDLRSKGAQAYLSLAKEWLGL
                     EIPARREA"
     gene            854..1723
                     /locus_tag="VK150_09065"
     CDS             854..1723
                     /locus_tag="VK150_09065"
                     /inference="COORDINATES: protein motif:HMM:TIGR00180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HLP31499.1"
                     /translation="MNHPLKRPALGRGLTSLMSQMAPEDASQRELPLGSLVPNRAQPR
                     THFDETALAELAESLKQHGMVQPIVVRKVGDQFEIIAGERRWRAARLAGIAMVPVVVK
                     EVPDDRLLEIALVENIQRQELNPIEEATAYWQLGEHLRLTQEQVADRVGKSRPQVANT
                     LRLLRLPSELKAEVAHGRLSTGHAKVLLGIPDPRLQEQLAHEVVAEQLSVRALEARIQ
                     QLQKQTKAKGKKKHPQELFIKAAAEELTQSWGTRVEIKARGKAGTLVMHYGSEGELDR
                     LFEALKHGPAKRR"
     gene            1749..2603
                     /gene="accD"
                     /locus_tag="VK150_09070"
     CDS             1749..2603
                     /gene="accD"
                     /locus_tag="VK150_09070"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HLP31500.1"
                     /translation="MSWFVKKRQQKTAVEEKTVRVPEGLWIKCEACKELIYRKELVNT
                     HNVCPKCGYHFRIGVDERLENLMDEGWTTLFSNLRSADPLDFVAIKSYKEQLKKLDQA
                     GQTEDAVVVVEGTISGHPVVTAVMNFDFLAASMGSVVGEKLRLGAERALEKQCGYIIV
                     SCSGGARMQEGTLSLMQMAKVSAALAKLDKAGLPYLSLLTDPTTGGVSASYAMLGDLN
                     IAEPKALIGFAGPRVIEQTIKQSLPEGFQRSEFLQAHGMVDKVVNRDHLKDFITACLA
                     WMMPTPKD"
     gene            2603..3838
                     /locus_tag="VK150_09075"
     CDS             2603..3838
                     /locus_tag="VK150_09075"
                     /inference="COORDINATES: protein motif:HMM:TIGR01499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HLP31501.1"
                     /translation="MASDYEPIHIPRLHERGHMGIKCGLENIQALLDGLGRPDAGYPV
                     VLLAGTNGKGSTGAFLAHMLKSAGFVVGWTTSPHLADVTERIWVDGEPIGAGALDLLL
                     GEAFEAEARAGLNATYFELMITAALSAFRMTGVEVALVEVGMGGRWDATNATDPILTV
                     LTTVGLDHQQYLGDTREAIAVEKLCTARDGRPLVLGPSLDPEWIRPLLSCKPTLHPAP
                     RLGPADIRWDHSRVGGKRVGLAGLHQLDNLATAFEAVRQLQTQGFPIPDDRLWAGAAS
                     AIWPGRLWAVPGLEGVWMDGAHNPDGARVLADHALACGVRPHLYVGSMGDKDLAGVAR
                     ELKRMRPLSVTFVQGDAPRYATAPALWSAWGMEAPMLTLRQASAHLRAQSEAPRLVTG
                     SLYLLGDLLREMGIRPYSG"
BASE COUNT          641 a         1360 c         1290 g          557 t
ORIGIN      
        1 actggtgtgt tccacacccg aggggattcc gagatgcttg gttcagccag cgcctgcgcg
       61 atgatgaggg ccgcctgatg cgcgcccggg tggtggtcct ggcgaaccag aagggcgggg
      121 tcggcaagac caccacggcc atcaacctcg ccgcgtccct cgcgatgatg gagaagatgg
      181 tgctgctggt ggacttcgat cctcaaggcc acagcaccac ggggctgggc ttcgccaagc
      241 cggaccaccg cgccggatcg tacgccctga tgaaaggcgc ccccgccgag gccctcatcc
      301 tcagcaccga agttcccatg atgcaggtgc ttcccgccgg aaaggatctg gcccagctgg
      361 agttcgagct cttcgagctg ccccagctcc aggtgctcaa gaatgggctc gagcccctca
      421 tggaccgctt cgactacatc ctcatcgatc caccgccgag cctcggcatg atcacgctca
      481 acgcgctgtc ggcggccgac gaggtgatcg tccccatgcc ctgcgagttc ttcgcgctcg
      541 atggactggc ggagctgacc gagaccctgc gccgcatcca ggccggtccc aatccccggc
      601 tgaagctggg cggcatcctc ctcacgatgg cggaggagcg caccaacctg ggcgccgccg
      661 tggccaacga agtgcgccac gccttccccg ggaaggtctt ccagaccatg atcccccgca
      721 acatccgact cgccgaggcc cccagccacg gcaagccggt ggccttctac gacctgcgct
      781 ccaagggcgc ccaggcctac ctcagccttg cgaaggagtg gctcggcctg gagatccccg
      841 cgaggaggga agcttgaacc atccgctgaa gcgcccggcc ctgggccgtg gcctgacctc
      901 gctcatgagt cagatggctc ctgaagatgc ctcccagcgc gagctgcccc tgggcagcct
      961 cgtgcccaac cgggcccagc cccgcaccca cttcgacgag acggccctgg ccgagctggc
     1021 ggagagcctc aagcagcacg gcatggtcca gcccatcgtc gtgcggaagg tgggcgacca
     1081 gttcgagatc atcgccggtg agcgccgttg gcgggcggcc cgcctggcgg gcatcgccat
     1141 ggtgccggtg gtggtgaagg aggtccccga cgaccgcctc ctggagatcg ccctggtgga
     1201 gaacatccag cgccaggagc tgaatcccat cgaagaggcc acggcgtact ggcagctggg
     1261 cgagcacctg cgcctcaccc aggagcaggt ggccgaccgg gtcggcaagt cccggcccca
     1321 ggtggccaac accctccgcc tgttgcggct gccctcggag ctgaaggcgg aggtggccca
     1381 cgggcgcctc agcaccggcc acgccaaggt gctgctgggc atccccgacc cccgcctcca
     1441 ggagcagctg gcccacgagg tggtggccga gcagctgagt gttcgggccc tggaggcgcg
     1501 catccagcag ctccagaagc agaccaaggc gaagggcaag aagaagcacc cgcaggagct
     1561 cttcatcaag gccgccgccg aggagctcac ccagtcctgg ggcacccgcg tcgagatcaa
     1621 ggcgaggggc aaggccggca ccctggtgat gcactacggc agcgagggcg agctggatcg
     1681 gctcttcgag gccctgaagc acggtccggc caagcgacgc taggcgcgag tttaaggtag
     1741 gagcacccat gtcctggttc gtgaagaagc gtcagcagaa gaccgccgtc gaggagaaga
     1801 ccgtccgggt gcccgagggc ctctggatca agtgcgaggc ctgcaaggag ctgatctacc
     1861 gcaaggagct ggtcaacacg cacaacgtct gccccaagtg cggataccac ttccgcatcg
     1921 gcgtggacga gcggctcgag aacctcatgg acgagggctg gaccaccctg ttcagcaacc
     1981 tccgcagcgc cgatcccctg gatttcgtgg ccatcaagag ctacaaggag cagctgaaga
     2041 agctggacca ggccggccag accgaggacg ccgtggtggt cgtggagggc acgatctccg
     2101 ggcatcccgt ggtgaccgcc gtgatgaact tcgacttcct ggccgccagc atgggcagcg
     2161 tggtcggcga gaagctgcgc ctgggcgccg agcgggccct ggagaagcag tgcggctaca
     2221 tcatcgtcag ctgcagcggc ggcgcccgga tgcaggaggg caccctgtcg ctcatgcaga
     2281 tggccaaggt gagcgcggcg ctggccaagc tcgacaaggc cggcctgccc tacctcagcc
     2341 tcctgacgga ccccaccacc ggcggcgtga gcgccagcta cgccatgctg ggcgacctca
     2401 acatcgccga gcccaaggcc ctcatcgggt tcgccgggcc ccgcgtcatc gagcagacca
     2461 tcaagcagag cctgcccgag ggcttccagc gctcggagtt cctccaggcc cacggcatgg
     2521 tggacaaggt ggtcaaccgc gatcatctca aggacttcat caccgcctgc ctggcgtgga
     2581 tgatgccgac gcccaaggat tgatggccag cgactacgag cccatccaca tcccgcgcct
     2641 ccacgagcgg ggccacatgg gcatcaagtg cgggctggag aacatccagg cgctgctcga
     2701 tggcctgggc cgtccggacg cgggctatcc cgtggtgctc ctcgcgggca ccaacggcaa
     2761 gggcagcacc ggggccttcc tcgcccacat gctgaaatcg gcgggcttcg tggtgggctg
     2821 gaccacgtcg ccgcacctcg ccgacgtcac cgagcgcatc tgggtggatg gcgagcccat
     2881 cggggccggg gccctggacc tgctgctggg ggaggccttc gaggccgagg cccgggccgg
     2941 gctcaacgcc acctacttcg agctgatgat caccgccgcg ctctccgcct tccgcatgac
     3001 cggggtggag gtggccctgg tggaggtcgg catgggcgga cggtgggatg ccaccaatgc
     3061 cacggatccg atcctcacgg tgctgaccac cgtcgggctc gaccatcagc aatacctggg
     3121 cgacacacgg gaggccatcg ccgtcgagaa gctctgcacg gcccgcgatg gccgccccct
     3181 ggtgctgggc ccctccctgg atccggagtg gatccgcccc ctgctgtcct gcaaaccgac
     3241 cctgcatcca gcgccccgcc tggggcccgc cgacatccgc tgggatcatt cccgcgtcgg
     3301 tggcaaacgg gtgggcctcg ccgggctgca ccagctcgac aacctcgcca cggccttcga
     3361 ggctgtgcgg caactgcaga cccagggctt ccccattccc gacgaccgcc tctgggccgg
     3421 cgcggccagc gccatctggc ccggccgcct ctgggcggtg cccggtcttg agggcgtgtg
     3481 gatggatggc gcccacaatc ctgatggcgc cagggttctg gccgaccacg ccctggcctg
     3541 cggggtgcgc ccccacctct acgtgggctc catgggggac aaggatcttg cgggcgtggc
     3601 ccgggaactc aagcggatgc ggcccctctc ggtgaccttc gtgcaggggg acgcgccccg
     3661 gtacgccaca gccccggccc tctggtcggc ctggggcatg gaggcgccga tgctcacctt
     3721 gcgccaggcg tcggcccacc ttcgggccca gtcggaggcg ccgcggctgg tgacgggctc
     3781 cctctacctg ctgggcgacc tcctccggga gatgggcatc cggccgtact caggctgagc
     3841 ccccctcc
//
LOCUS       DATGWW010000621         1580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_206061, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000621 DATGWW010000000
VERSION     DATGWW010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206061"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..837)
                     /locus_tag="VK150_09080"
     CDS             complement(<1..837)
                     /locus_tag="VK150_09080"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLP31502.1"
                     /translation="MSTKAPAGILKSFPPVFWLANVMELFERAAYYGLNSVLAVYLTN
                     KVSEGGLGFTEQSVGFLQSLIYAFTYVIPIAGGALADRYGYRRMLLFSFSILSAGYFI
                     AGSVTMYGAVFAALLLMATGAGLFKPIISGTLARSTTEENSGFGFGIYYWMINIGAFL
                     APLVVSVLKGFSWRYVFIASAIYCAAMLLPTVFLFKDPPKPENTKSLKEVAHGAAMVL
                     GDARFMLMIVVYSGFWILYFQNFGSVLWYLRDFVDATPVNAAFAAIGIPLKFDAEHVT
                     VVN"
     gene            complement(888..1175)
                     /locus_tag="VK150_09085"
     CDS             complement(888..1175)
                     /locus_tag="VK150_09085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31503.1"
                     /translation="MTVHRILDMTISRPDFLRRLPAAVGQEAVREENGRFSGGEGTRR
                     WTLRLESLPDRHLGRVILPCHRVAIDLEGYGDPEAEAFLVRFLRAFQRGGG"
     gene            complement(1176..1430)
                     /locus_tag="VK150_09090"
     CDS             complement(1176..1430)
                     /locus_tag="VK150_09090"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HLP31504.1"
                     /translation="MKVTLKLFASLSAHLPAEARARHRLDLEVAAGSTVLDVIRSQRI
                     PPGQCAIVLVDGVWVAPADRAVRELAEDEVLAIWPPVAGG"
BASE COUNT          291 a          518 c          552 g          219 t
ORIGIN      
        1 gttgaccacg gtgacgtgct cggcgtcgaa cttcagcggg atccctatgg cggcgaaggc
       61 cgcgttcacg ggggtggcgt ccacgaagtc ccgcaggtac cagagcacgg atccgaagtt
      121 ctggaagtag aggatccaga agccggagta aacgacgatc atcagcatga aacgcgcgtc
      181 gcccagcacc atggccgcgc cgtgcgcgac ctccttcagg ctcttggtgt tctcgggctt
      241 gggcggatcc ttgaagagga agaccgtggg cagcagcatg gccgcgcagt agatcgccga
      301 ggcgatgaac acgtagcgcc aggagaagcc cttcagcacg ctcaccacca gcggggcgag
      361 gaaggcgccg atgttgatca tccagtagta gatgccgaag ccgaaccccg agttctcctc
      421 ggtggtggag cgcgccaggg tgcccgagat gatgggcttg aagaggcccg cgccggtggc
      481 catgagcagc agggccgcaa ataccgcgcc gtacatcgtc acgctgccgg cgatgaagta
      541 gcccgccgag aggatggaga acgagaacag cagcatgcgc cggtagccgt agcgatcggc
      601 cagggcgccg ccggcgatgg ggatcacgta ggtgaaggcg tagatgaggc tctggagaaa
      661 tcccacggac tgctccgtga agccaagccc gccctcggac accttgttcg tgaggtagac
      721 ggccagcacc gagttcaggc cgtagtacgc ggcccgctcg aagagctcca tgacgttcgc
      781 cagccagaag acgggcggga aggacttgag gattccggcg ggggctttgg tcgacatccg
      841 gcgattatac gggatcaacc ggtcatccat gcgtcaggat actgcggtca gccgccgccg
      901 cgctggaagg cccggaggaa gcggaccagg aaggcctcgg cttctgggtc gccatacccc
      961 tccaggtcga ttgccacccg gtggcagggg aggatcaccc ggcccaggtg acggtccgga
     1021 agggattcca ggcgaagggt ccagcgccgc gtgccctccc cgccgctgaa ccgaccgttc
     1081 tcctcccgca ccgcctcctg gcccacagca gcgggcaggc ggcgcaggaa atccggacgg
     1141 ctgatggtca tgtccaggat ccggtggacc gtcatctagc ctccggccac cggcggccag
     1201 atggccagca cctcgtcctc ggccagctcc cgcacggccc ggtccgctgg cgccacccac
     1261 acgccgtcga ccagcacgat ggcgcactgg cccgggggga tgcgctgcga ccggatcacg
     1321 tccagcacgg tgctgcccgc cgccacctcc aggtcgaggc gatggcgggc ccgggcctcc
     1381 gccggcaggt gggccgacag ggaggcgaac agcttgaggg tgaccttcat gccacgctgt
     1441 gggcggccgc gaggtaggcc tgcatgacgc gggtgggatc ctccatgagc cgctgcttcc
     1501 agacgcccag ccgaacccgg ccctcgatga ggccccggaa ggcccccgcg tggtcggcga
     1561 agcccacgca gttggcgccg
//
LOCUS       DATGWW010000622         1977 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_206253, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000622 DATGWW010000000
VERSION     DATGWW010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206253"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VK150_09095"
     CDS             <1..414
                     /locus_tag="VK150_09095"
                     /inference="COORDINATES: protein motif:HMM:NF013768.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HLP31505.1"
                     /translation="ESLRARLQELATRWPEDPGVAEPPVLMSGLGQLGGLPEFEDVAR
                     FRELMAAFEEHGRLARLLNAFADRASEDVQLLLGTENPYFEAWPLATAVRTVALGPAG
                     YVTFALVGPLRMDYGRVLGGLRWWSRQVQRRRDRG"
     gene            573..1211
                     /locus_tag="VK150_09100"
     CDS             573..1211
                     /locus_tag="VK150_09100"
                     /inference="COORDINATES: protein motif:HMM:NF013212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HLP31506.1"
                     /translation="MDLNLDETLEGDLQAVADEVASEYHTQVVPEMDDLPDLPPIANQ
                     EGRVDLESALTEAEHQMEDLLRREAELMDQQRRLAADFNNFRNRAQRDISLAVEQAER
                     KILLEVLPILDNFERGLSATYQDVESFRAGVELIRKQFLEALRRLSVEALPLQVGEAF
                     DALHAEALTTFSDPNLPDGAVAAIYERGYNLRGQLLRAARVVVNRVSDSGKS"
     gene            1287..>1977
                     /locus_tag="VK150_09105"
     CDS             1287..>1977
                     /locus_tag="VK150_09105"
                     /inference="COORDINATES: protein motif:HMM:NF012242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HLP31507.1"
                     /translation="MAGKLIGIDLGTTNSCVCVMEGGDSRVIPNREGSRTTPSVVAFT
                     DKGDVLVGHIAKRQAVTNPQRTLFAVKRLIGQRFQAPRVQEAVGRLPFPVVSAPNGDA
                     WLRVGERDYAPPEVSAIVLRSLKQAAEAFLHEEVTDAVITVPAYFDDAQRQATKDAGK
                     IAGLNVQRIINEPTAAALAYGFNKKGVKQILGIYDFGGGTIDFTLMEMNDGVFEVLAT
                     SGDTFLGGEDID"
BASE COUNT          330 a          680 c          645 g          322 t
ORIGIN      
        1 gagtccctcc gggcccgcct gcaggagctg gccacccggt ggccggagga tcccggcgtc
       61 gccgagcccc ccgtgctcat gtccggcctg ggacagctgg gaggcctccc cgagttcgag
      121 gatgtggccc ggttccggga gctgatggcc gccttcgagg agcatggccg cctggcgcgc
      181 ctgctcaatg ccttcgccga ccgggcctcg gaagatgtcc agctcctcct gggcaccgag
      241 aacccctact tcgaggcctg gcccctggcc acggccgtgc ggaccgtggc cctgggcccg
      301 gcaggctatg tcaccttcgc cctggtgggc ccgcttcgca tggattacgg ccgcgtgctg
      361 ggcggactgc gctggtggtc ccggcaggtc cagcggcgcc gcgaccgggg ctgaccggtc
      421 cccgcactgg gcaagggcag ccggcccacc cttgcgcgac gcggactggt tacccaccca
      481 tggcgtgttc tgcttatact tctgcgatgc ctaccgatat gccccgccag ccggattcga
      541 agccagcctc ccagggcgaa gccgaggatt tggtggatct caacctggac gagacgctgg
      601 aaggcgatct ccaggccgtg gccgacgaag tggcctccga gtaccacacg caggtggtgc
      661 ccgaaatgga tgatctgccg gaccttccgc cgattgccaa ccaggagggc agggtggatc
      721 tggaatccgc cctcaccgag gccgagcacc agatggaaga tctcctccgc cgcgaagcgg
      781 agctcatgga ccagcagcgg cgcctcgccg cggacttcaa caatttccgc aaccgcgccc
      841 agcgggacat ctcccttgcc gtcgaacagg ccgagcgcaa gatcctgctc gaagtgctgc
      901 cgatcctcga caatttcgag cggggtctga gcgcgacgta ccaggacgtg gagtcgttcc
      961 gggccggtgt ggagctcatc cgcaagcagt ttctcgaggc gctgcgaagg ttgagtgtgg
     1021 aagccctgcc gctccaggtg ggcgaagcct tcgatgcgct ccacgcggag gccctcacca
     1081 cattctccga tccgaacctt cccgacggcg cggtggcggc catctacgag cgcggctaca
     1141 acctccgcgg ccagttgctg agggcggcca gggtggtggt caaccgggtc tcggattcgg
     1201 gaaaatccta gtgtgctcca gcccttgtgc tggatgcgac gacgagaatt aagtagcatg
     1261 taggcgcgac ccccggagtt ccacccatgg caggcaaact gatcggcata gatctgggca
     1321 cgaccaacag ttgcgtctgc gtgatggagg gcggggactc gcgggtcatc ccgaaccgcg
     1381 aaggcagccg caccacgcct tcggtcgtcg ccttcacgga caagggcgat gtgctcgtgg
     1441 ggcatatcgc caagcgccag gccgtcacca atccccagcg caccctcttc gcggtcaagc
     1501 ggctcatcgg acagcggttc caggcccctc gggtgcagga ggccgtcggc cgcctgccct
     1561 ttccggtggt gtctgccccc aatggcgacg cctggctgcg ggtgggtgag cgcgactatg
     1621 ctccgcccga agtctccgcc atcgtcctgc gctccctgaa gcaggccgcc gaggccttcc
     1681 tccacgagga agtcacggac gccgtgatca ccgtgccggc ctacttcgac gacgcccagc
     1741 ggcaggccac caaggacgcc ggcaagatcg ctggtctcaa cgtccagcgc atcatcaacg
     1801 agcccacggc tgcggccctg gcctatggct tcaacaagaa gggcgtcaag cagatcctcg
     1861 gcatctatga cttcggcggc ggcaccatcg acttcacgct gatggagatg aatgacggcg
     1921 tcttcgaagt gctcgccacc agcggcgaca ccttcctggg cggcgaggac atcgacc
//
LOCUS       DATGWW010000623         5385 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_125190, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000623 DATGWW010000000
VERSION     DATGWW010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5385
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125190"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..902)
                     /locus_tag="VK150_09110"
     CDS             complement(36..902)
                     /locus_tag="VK150_09110"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HLP31508.1"
                     /translation="MNRFKTFLLLGLVTSLLVALGATLGKGWLLGCTVAAFALNLGAY
                     FWSDRLVLRMQGAEELPEREAPVLHADVAELAAQAGLPKPRIFLVRDDAPNAFATGRN
                     PEHGVVAFTAGLLRTMPRRELRGVIAHELAHIQNRDILVATVAAGLAGAVSLLANVLQ
                     WGALLGGGSQSDEEGGGSPFGGLIFALLAPLGASLIQFAISRSREFMADARAAQVTGD
                     PEGLALALERLGRLQDVIEPGPTAEPATASLMIASPFAGGGLLRWFSTHPPLEVRVAL
                     LRDRSRRPGLAA"
     gene            complement(914..1219)
                     /locus_tag="VK150_09115"
     CDS             complement(914..1219)
                     /locus_tag="VK150_09115"
                     /inference="COORDINATES: protein motif:HMM:NF014534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HLP31509.1"
                     /translation="MNIQIRGIGIPQTEALTAHIQRSLAFALSRFATRLDRVVVRFSD
                     LNGPKGGCDKVCRVGFTLKGAGTEAVEARDLDLYSAVDQAAAKAGRRVARLVEQARG"
     gene            1316..2215
                     /gene="nhaR"
                     /locus_tag="VK150_09120"
     CDS             1316..2215
                     /gene="nhaR"
                     /locus_tag="VK150_09120"
                     /inference="COORDINATES: protein motif:HMM:NF008284.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional activator NhaR"
                     /protein_id="HLP31510.1"
                     /translation="MDWLNYHHLFYFWTIAREGSVTQAAERLRLAQPTLSAQIRSLEK
                     ALGVRLFKKEGRGLALTEAGRTAFRYADGIFGLGKELQESLAGWTADRAPLLAVGISD
                     VLPKLMVRTLLEPALHLPEPIRLLCREDRTDRLLAQLSLHELDLVLSDMPPPPGSAVK
                     AYSHLLGECGVQIFGAEALRKRHPGDFPACLNGAPVLLPLEGSALRRGLDQWFELEGL
                     HPRIVGEVDDSALLKSFGQQGIGFFAAPSPLAREVERQYRVRRLGPAAGVRERVYALT
                     LDRRLRHPAVVAISESARHRVFG"
     gene            complement(2222..3697)
                     /locus_tag="VK150_09125"
     CDS             complement(2222..3697)
                     /locus_tag="VK150_09125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31511.1"
                     /translation="MLTRWILLAALSLPVVLLPAQALPARVEAPVSAELPTGERWQKH
                     FREDLLPFWNVPDAWGSPRGDFPTFRGNDGKAVDWANPPEALAKAPGWIKENFGREYV
                     RMKSRQTYFYGVAYHLTGDPKMLELARDGATFIRTRALDPVSGSAVSYWEKGVARPEV
                     LARTSQDLAYAQLGLAMYYYLTRDEAVLRDIKKLKRHIFTQYWNPEWKALRWVVKEDP
                     QGEHLRQELVAQLDQVNAYMLMLTPILPKADRKAWAADLQRLAQTMVRDYHDADRHLF
                     WGTIHDPAEKKLGSRHTDFGHTAKAYWMLERIGRLTKDQALVDLATTGARAVLKQAYL
                     PDSGTWGSKLRPDGSVDTGKEWWIYAELDQLAGTLALTDPAQAQPLPRTAAFWFEVMV
                     DHEGHEVWGGAGGPEMKPWRGPKIHQWKSGYHSAEHALVGYLTAQALHHQPATLYFAP
                     KDPKAPLLPYVFEGTETRRAAQPLPGFPGRRKVEVSFTNLR"
     gene            complement(3794..4801)
                     /gene="gap"
                     /locus_tag="VK150_09130"
     CDS             complement(3794..4801)
                     /gene="gap"
                     /locus_tag="VK150_09130"
                     /inference="COORDINATES: protein motif:HMM:TIGR01534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HLP31512.1"
                     /translation="MAIKVGINGFGRIGRMVFRAAVQDFPDVEIVGINDLLEPEYLAY
                     MLQYDSVHGRFKGTVAVEGNTLIVNGKRIRLTAVKDPAELKWNEVGADIVVECTGIFL
                     EGTGAKGADKHLQAGAKKVIMSAPSKDDTPMFVYGVNHAAYAGQAIISNASCTTNCLA
                     PLAKVLHDAFGIKRGLMTTVHATTATQKTVDGPSNKDWRGGRGILENIIPSSTGAAKA
                     VGKVIPELNKKLTGMSFRVPTSDVSVVDLTAELKTETTYEAICAAMKAASEGPMKGVL
                     GYTDQKVVSTDFRGESCTSVFDADAGMALDGTFVKLVAWYDNEWGYSCKVLEMVRVMA
                     K"
     gene            complement(4834..>5385)
                     /gene="eda"
                     /locus_tag="VK150_09135"
     CDS             complement(4834..>5385)
                     /gene="eda"
                     /locus_tag="VK150_09135"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008675 -
                     2-dehydro-3-deoxy-phosphogluconate aldolase activity
                     [Evidence IEA];
                     GO_function: GO:0008700 - 4-hydroxy-2-oxoglutarate
                     aldolase activity [Evidence IEA];
                     GO_process: GO:0009084 - glutamine family amino acid
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009255 - Entner-Doudoroff pathway through
                     6-phosphogluconate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HLP31513.1"
                     /translation="TLEITLRTPVALEAIRQIRKAFPQAHVGAGTVTTPEALRQVAEA
                     GAVFAVSPGLTARLAEAAATSPLPLLPGVMSPSEAMFAREAGFRLLKLFPAEQAGGLA
                     MLKALAGPFQDLRFCPTGGIGPGSAVEYLAQPNVLCVGGSWLTPKALLAAGDWKAITE
                     LARQASALQRQDASSLPRRSAGR"
BASE COUNT          817 a         1786 c         1912 g          870 t
ORIGIN      
        1 ccagggggaa ccgatgcttt ccattcagag gctccttagg ccgcgaggcc agggcggcgg
       61 gagcgatccc gcaggagggc cacccggacc tcaagggggg gatgggtgct gaaccagcgg
      121 aggaggccac cacccgcgaa ggggctggcg atcatcaggc tggcggtggc gggctcggcg
      181 gtggggccgg gttcgatcac gtcctggagg cgccccagcc gctcgagggc cagggccagg
      241 ccttcggggt cgcccgtcac ctgcgcggcc ctggcatcgg ccatgaactc ccgggagcgg
      301 gagatggcga actggatgag ggaggctccg aggggcgcca ggagggcgaa gatcaggccg
      361 ccgaaggggc tgccaccccc ttcctcgtcg ctctgggagc cgccacccag cagggccccc
      421 cactgcagga cgttggccag gaggcttacg gctccagcga ggcccgccgc caccgtggcc
      481 accaggatgt cccggttctg gatgtgggcc agctcgtggg cgatgacgcc ccggagctct
      541 cggcggggca tggtgcggag caggcccgcc gtgaaggcca ccacgccgtg ttcggggttc
      601 cggcccgtgg cgaaggcgtt gggcgcgtca tctcgcacga ggaagattct cggtttggga
      661 aggccagcct gggccgccag ctccgccacg tcggcatgga gcaccggggc ctcacgctcc
      721 ggaagctcct ccgccccctg catgcgcagc acgagccggt cgctccagaa gtaggcgccc
      781 aggttcaggg cgaaggccgc gacggtgcag ccgaggagcc aacccttgcc cagcgtcgcg
      841 cccagggcca ccaggaggct ggtgaccagc ccgagcagca aaaaggtctt gaagcgattc
      901 atcgtgtctc ctcctagcct cgggcctgtt cgaccagccg ggccacgcgc cggccggcct
      961 tcgccgccgc ctggtccacc gcggaataga ggtcgaggtc ccgggcctcc acggcctccg
     1021 tcccggcacc cttcaacgtg aatcccaccc ggcagacctt gtcacagccc ccctttggac
     1081 cgttcaggtc gctgaaccgg accacgacgc ggtcaaggcg ggtcgcgaag cgggacaggg
     1141 cgaaggccag gctgcgctgg atgtgagctg tcagggcctc cgtctgggga atgccgatgc
     1201 ctcgaatctg gatgttcatt gcgcctccac accggcagtc tcgggcggag agaaagatca
     1261 atccaataga taaaaacagt aaaaatatag ataaaatcta agtataggaa tgcgcatgga
     1321 ctggttgaac taccaccact tgttctattt ctggaccatc gcccgggagg gcagcgtcac
     1381 gcaggccgca gagcggctcc ggctggccca gcccaccctg agcgcccaga tccggagcct
     1441 ggagaaggcc ctgggggttc gcctgttcaa gaaggaggga cggggcctgg cgctgacgga
     1501 ggcggggcgg accgccttcc gctatgccga tggcatcttc ggcctcggca aggagctgca
     1561 ggagtcgctc gcgggctgga ccgcggatcg cgccccgctc ctggcggtgg ggatttcgga
     1621 cgtcctgccc aagctcatgg tgcgcaccct tctggagccc gccctccacc tgcccgaacc
     1681 catccgcctg ctgtgccgag aggaccggac ggaccgcctg ctggcgcagc tctcactcca
     1741 cgaactggac ctggtgctgt ccgacatgcc gcctcctccg ggcagcgccg tgaaggccta
     1801 cagccacctg ttgggcgagt gcggggtcca gatcttcggc gccgaggccc tgcggaagcg
     1861 ccacccgggc gactttccgg cctgcctgaa cggggccccc gtcctgctcc ccctggaggg
     1921 ctcggcccta cgccggggat tggaccagtg gttcgagctg gaagggctcc accccaggat
     1981 tgtcggggaa gttgatgaca gcgccctgct gaagagtttc ggccagcagg gaatcggatt
     2041 cttcgcggcc ccctcccccc tggcccggga ggtggaacga caataccggg tccgacgcct
     2101 gggtccggca gcgggggtgc gggagcgcgt gtacgccctc acgctcgacc gccggctccg
     2161 gcatccggcc gtggtggcca tttccgagtc ggcgaggcac cgcgtcttcg ggtgagtggg
     2221 ttcacctcag gttcgtgaag ctcacttcaa ccttccggcg ccccgggaag cccggcagcg
     2281 gctgggcggc gcgccgggtc tcggtgcctt cgaacacgta ggggagcagc ggggccttgg
     2341 ggtccttcgg cgcgaagtac agggtcgccg gctgatggtg cagggcctgg gccgtgagat
     2401 agcccaccag ggcgtgttcc gcggagtggt agccgctctt ccactggtgg atcttgggac
     2461 cgcgccaggg cttcatctcg gggccgcctg cgccgcccca gacttcgtgg ccctcgtggt
     2521 ccaccatcac ctcgaaccag aaggccgccg tgcggggcag gggctgggcc tgggccggat
     2581 ccgtcagggc cagggtgccg gccagctggt ccagctcggc gtagatccac cactccttgc
     2641 ccgtatccac cgagccgtcc gggcggagct tggagcccca ggtgccggag tcgggcaggt
     2701 aggcctgctt cagcacggcc ctggcgccgg tggtggccag gtccaccagg gcctggtcct
     2761 tcgtgagccg gccgatgcgc tcaagcatcc agtaggcctt cgcggtgtgg ccgaaatccg
     2821 tgtgacgcga gccgagcttc ttctcggcgg ggtcgtggat ggtgccccag aacaggtgac
     2881 ggtcggcgtc gtggtagtcg cgcaccatgg tctgggccag gcgctgcagg tcggcggccc
     2941 aggccttgcg gtccgccttg ggcaggatcg gggtgagcat cagcatgtag gcgttcacct
     3001 ggtccagctg cgccaccagc tcctggcgca ggtgctcgcc ctgaggatcc tccttcacca
     3061 cccagcggag ggccttccac tcggggttcc agtactgggt gaagatgtgc cgcttgagct
     3121 tcttgatgtc gcgcagcacc gcctcgtccc gggtcaggta gtagtacatg gcgagcccca
     3181 gctgggcgta ggccaggtcc tggctggtgc gggcgagaac ctcgggccgg gccacgccct
     3241 tctcccagta cgacacggcg ctgccgctca cgggatccag ggcccgcgtc cggatgaagg
     3301 tggcgccgtc ccgggccagt tccagcatct tcgggtcgcc ggtcaggtgg taggccacgc
     3361 cgtagaagta ggtctggcgg gacttcatgc ggacgtactc gcggccgaag ttctccttga
     3421 tccagcccgg agccttggcc agcgcctcgg gcgggttggc ccagtccacc gccttgccgt
     3481 cattgccccg gaaggtgggg aaatcgcccc ggggcgagcc ccaggcgtcc ggcacgttcc
     3541 agaaaggcag caggtcctcg cggaagtgct tctgccagcg ttcgcccgtg ggaagctcgg
     3601 ctgatacggg cgcttccacc cgggcgggaa gggcctgggc gggcagcagc accaccggca
     3661 gcgacagggc ggccagcagg atccatcgcg tcaacatggg tcacctccag agcgagagcg
     3721 gccaccagca taccggcggc ctctcccgga gttccaacca cggggaccgc gcgcggcgga
     3781 ttttctcgac ggcctacttg gccatcaccc gcaccatctc cagcaccttg caggagtagc
     3841 cccactcgtt gtcgtaccag gccacgagct tcacaaaagt gccgtctagg gccatgcccg
     3901 cgtcggcgtc gaagacggag gtgcagctct cgccgcggaa atccgtggag acgaccttct
     3961 ggtcggtgta gcccagcacg cccttcatcg ggccctcgga agcggccttc atggcggcgc
     4021 agatggcttc gtacgtggtt tccgtcttga gctcggcggt gaggtccacc acggagacgt
     4081 ccgaggtggg cacgcggaag gacatgcccg tgagcttctt gttcagttcg gggatcacct
     4141 tgcccacggc cttcgcggcg ccggtgctgc tggggatgat gttttccagg atgccgcgcc
     4201 cgccgcgcca atccttgttg ctggggccgt ccacggtctt ctgggtggcc gtggtggcat
     4261 gcacggtggt catgaggccg cgcttgatgc cgaaggcgtc gtgcagcacc ttggccaggg
     4321 gtgccaggca gttggtggtg caggaggcgt tcgagatgat ggcctggccc gcgtacgccg
     4381 cgtggttcac accgtagacg aacatgggcg tgtcgtcctt cgacggggcg gacatgatca
     4441 ccttcttggc gcctgcctgc aggtgcttgt cggcgccctt ggccccggtg ccctccagga
     4501 agatgcccgt gcattccacg acgatgtcgg cgcccacctc gttccacttc agctccgcgg
     4561 ggtccttcac ggccgtcagg cggatgcgct tgccgttgac gatgagggtg ttgccctcca
     4621 cggcgacggt gcccttgaag cggccatgca cggagtcgta ctgaagcatg taggccaggt
     4681 actccggttc gagcaggtcg ttgatgccga cgatctccac gtcggggaag tcctgcaccg
     4741 ccgcgcggaa caccatgcgt ccgatgcgac cgaatccgtt gatgccgact ttgatggcca
     4801 tggcactgct cctggtggag gggtggaaaa aggtcagcgg ccggcgctcc ggcgcggcag
     4861 cgaagaagcg tcctggcgct gaagcgcgga ggcctggcgg gccagctccg tgatggcttt
     4921 ccagtcgccg gcggcgagga gggctttggg agtcagccag gatccgccca cgcagagcac
     4981 gttcggctgg gcgaggtatt cgacggcgga gccggggccg attccgcccg tggggcagaa
     5041 ccgcagatcc tggaagggcc cagcgagggc cttcagcatg gcgaggcctc cagcttgctc
     5101 ggcggggaac agcttcagga gcctgaagcc cgcctcacgc gcaaacatcg cctcagaggg
     5161 tgacatgact ccgggcagga ggggcagggg gctcgtcgcg gccgcctcgg cgagccgggc
     5221 ggtgagacct ggactcaccg cgaacaccgc gcccgcctcc gcgacctggc gcagcgcctc
     5281 cggcgtggtc accgtgccgg cgcccacgtg ggcctggggg aaggctttcc ggatctgccg
     5341 gatggcctcc aatgcgaccg gcgtgcgcag ggtgatctcc agggt
//
LOCUS       DATGWW010000624         2508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_125387, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000624 DATGWW010000000
VERSION     DATGWW010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125387"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..860
                     /locus_tag="VK150_09140"
     CDS             <1..860
                     /locus_tag="VK150_09140"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HLP31514.1"
                     /translation="QAAYDSAAAALARAEANLPAVRKRAERFKELLAVNAVGQQDYDD
                     AAGALKQVEAEVQALKATAESARINLGYTRITAPISGRIGRSSVTPGALATAYQGPAF
                     TTIQQLSQVYVDSPQSSATLLGIQRNLAANRIKGSAEQAKVKLLLEDGTPYPQTGILK
                     FSDVTVDPSTGSQTLRMVFPNPRHVLLPGMYVRAIVEEGVVEQAILVPQQGVTRDPKG
                     NAIAMVVDGAGKVEQRTLKVDRAIGPKWLVMEGLRAGDRVIVEGLQKIRPGTTVKIVP
                     QGAKPAAAK"
     gene            873..>2508
                     /locus_tag="VK150_09145"
     CDS             873..>2508
                     /locus_tag="VK150_09145"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLP31515.1"
                     /translation="MVNFFIDRPIFAWVVAIVMMLAGLLAISTLPVSQYPPVAPPSIS
                     VDAFYPGASAKTVENTVTQIIEQKMTGLDRLLYMSAASDSAGHGSVTLTFQPGTDPDA
                     AWAKVQNKLELAKPLMPQVVQQMGISVTKSTKNIFMILSITSTDGSMNAEDLRDYLAS
                     NVENVISRVQGVGEVMSFGTQYAMRIWLNPDRMVAYRLTPDDIRQAVKAYNAQISAGQ
                     AGGLPAVQGQRLNVTVNVQELLQTPEQFAAIPLRINPDGSTIRLRDVARTELGTESYE
                     SDTKLNGKPAAGMLIRLASGANALDTSKLVKAKMDELSPYFPVGVQVSYPYETTPFVS
                     VAIAEVIKTLVEAVILVFLVMLLFLGNFRATLIPTIAVPVVLLGTFAILQYVGMSINM
                     LTMFAMVLAIGLLVDDAIVVVENVERIMHDEGLSPLEATRKSMGQITGALVGIGLVLS
                     AVFGPMAFFGGSTGIIFRQFSFTLITAMMLSVVVALVLTPSLCVTFLKPIEKGHEAAE
                     KGWKVTRPFFLWFDRLFYRTRDRYEGAVAHILRRKLP"
BASE COUNT          421 a          939 c          750 g          398 t
ORIGIN      
        1 accaggccgc ctatgactcg gctgccgccg ccctggcccg ggccgaggcc aacctgcccg
       61 ccgtgcgaaa gcgcgccgag cgattcaaag agctcctcgc cgtcaacgcc gtgggccagc
      121 aggactacga tgacgccgcc ggcgccctca agcaggtcga ggcggaagtc caggccctga
      181 aggccaccgc cgaatccgcc cggatcaacc tgggctacac ccgcatcacc gcgccgatct
      241 cgggccgcat cggcaggtcc agcgtgaccc ccggcgccct cgccacggcc taccagggcc
      301 cggccttcac caccatccag cagctgagcc aggtctacgt ggattcgccg cagtccagcg
      361 ccaccctgct gggcatccag cgcaacctgg cggccaaccg catcaagggc agcgccgagc
      421 aggccaaggt gaagctcctc ctggaggacg gcacgcccta cccccagacg ggaatcctga
      481 agttctccga cgttacggtg gacccgagca ccggctccca gaccctccgc atggtcttcc
      541 ccaacccgcg ccatgtgctg ctgcccggca tgtatgtccg cgccatcgtc gaggagggcg
      601 tggtcgagca ggcgatcctc gtgccgcagc agggcgtgac ccgcgacccg aagggcaacg
      661 ccatcgccat ggtggtcgac ggcgccggca aggtcgagca gcgcaccctc aaggtggacc
      721 gcgccatcgg cccgaagtgg ctggtgatgg aaggcctccg agccggcgat cgggtgatcg
      781 tcgagggtct gcagaagatc cggcccggca cgaccgtgaa gatcgttccc cagggcgcca
      841 agcccgcggc cgcgaagtag aggaggcgcc ccatggtcaa tttcttcatc gaccggccca
      901 tcttcgcgtg ggtggtggcc atcgtcatga tgctggcggg cctgctggcc atcagcaccc
      961 tgccagtctc ccagtacccg cccgtggccc cgccttccat ttcggtggat gcgttctacc
     1021 ccggtgcctc cgcgaagacc gtggagaaca ccgtcaccca gatcatcgaa cagaagatga
     1081 cgggcctcga ccggctgctc tacatgtcgg ccgccagcga ctccgccggc cacggcagcg
     1141 tgacgctcac cttccagccc ggcaccgatc ccgacgccgc ctgggccaag gtccagaaca
     1201 agctggagct cgccaagccc ctgatgcccc aggtcgtcca gcagatgggc atctcggtca
     1261 ccaagtcgac caagaacatc ttcatgatcc tgtccatcac ctcgacggac ggcagcatga
     1321 acgccgagga cctgcgcgac tacctggcct ccaacgtgga gaacgtcatc agccgcgtgc
     1381 agggcgtggg tgaggtcatg tccttcggca cccagtacgc catgcggatc tggctgaacc
     1441 ccgatcgcat ggtcgcctac cgcctcaccc ccgatgacat ccgccaggcc gtgaaggcct
     1501 acaacgccca gatctccgcc ggtcaggccg gtggcctgcc cgccgtccag ggccagcgcc
     1561 tgaacgtcac cgtgaacgtg caggagctcc tgcagacccc cgagcagttc gccgccatcc
     1621 ccttgcgcat caaccccgac ggctccacca tccgcctccg cgacgtggcc cgcacggagc
     1681 tgggcaccga atcctacgag agcgacacca agctcaacgg gaagcccgcc gcgggcatgc
     1741 tcatccgcct cgcctcgggc gccaacgcgc tcgacacctc caagctcgtg aaggccaaga
     1801 tggacgagct ctcgccctac ttccccgtcg gcgtgcaggt cagctacccg tacgagacca
     1861 cgcccttcgt gtccgtggcc atcgccgagg tgatcaagac gctggtcgag gcggtcatcc
     1921 tcgtcttcct ggtgatgctg ctcttcctcg ggaacttccg cgccaccctg atccccacca
     1981 tcgccgtgcc cgtggtgctg ctgggcacct tcgcgatcct ccagtacgtc ggcatgtcca
     2041 tcaacatgct caccatgttc gccatggtgc tggccatcgg cctgctggtg gacgacgcca
     2101 tcgtggtggt ggagaacgtc gagcgcatca tgcatgatga gggcctctcc ccgctggagg
     2161 ccacccgcaa gtccatgggc cagatcaccg gcgccctggt gggtatcggc ctcgtgctgt
     2221 cggcggtgtt cggtcccatg gccttcttcg gcggatcgac cggcatcatc ttccgccagt
     2281 tctccttcac cctcatcacc gccatgatgc tctcggtggt ggtggccctg gtgctcaccc
     2341 cctccctctg cgtcaccttc ctgaagccca tcgagaaggg ccacgaggcc gccgagaagg
     2401 gctggaaggt cacgcggccc ttcttcctct ggttcgaccg cctgttctac cgcacgcggg
     2461 atcggtacga gggcgccgtg gcccacatcc tgcggcggaa gctgccct
//
LOCUS       DATGWW010000625         3594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_207169, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000625 DATGWW010000000
VERSION     DATGWW010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3594
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207169"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VK150_09150"
     CDS             complement(<1..422)
                     /locus_tag="VK150_09150"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HLP31516.1"
                     /translation="MKPFYDLASLAKPLVTAPLALAFLDLDADRRWALGFPDRPSPLT
                     VRQLLSHGSGLPPWRPFTAEPLASLLARPLPDHPLLRGATPGLATYSDLNYRLLADLL
                     AQETGVPFAALGRASGLSAAPWGVAPVQVPDGPDTAAWT"
     gene            complement(419..1384)
                     /locus_tag="VK150_09155"
     CDS             complement(419..1384)
                     /locus_tag="VK150_09155"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HLP31517.1"
                     /translation="MSKLKVAVVGVGHLGQHHARIAASAPDAVLVAVVDPDATRGPEI
                     AAKFSAPWAASLDQVLAEVDAVQIAAPTGFHHRLGAQALQAGKHVLMEKPLAASLEEG
                     VALLQALNAARAAKPGLVAQVGHLERFNPAVAALRERGFKPRFLEAVRVSPFPARSLE
                     VDVVMDVMIHDLDLLRALVGRPVIDVEAVGVPVLTPYADLVNARLKFEGGAFATVTAS
                     RVARKKERTLRAFGDKEYASLDFAAQKLELLRLVMGPDGPEVKPETADIEEGEPLRLE
                     IEAFHAACLGKGQEGVTWEEGQEAMRVADQVQKAVARSLAEMHRA"
     gene            1450..1917
                     /locus_tag="VK150_09160"
     CDS             1450..1917
                     /locus_tag="VK150_09160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31518.1"
                     /translation="MNLKLEAVNLVRWLHFVALAVGGGAAVVALLLSGFEESREDLQG
                     LAATVWAKVVAWSFRLALIAGIGLLMLMLQGGQNPLKDGHYLHIKLVLVLVLVGLSEM
                     APKALAARKRGSALLVLVLFLASSFIVYNKGLFGGRPKAGPQIPVTAETLTAR"
     gene            1921..3570
                     /locus_tag="VK150_09165"
     CDS             1921..3570
                     /locus_tag="VK150_09165"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HLP31519.1"
                     /translation="MRSLLLALAGSCLFAGWPQTVPERTQFARTSTVQEVRAFMDALR
                     RQAPGLEPYHPKGAPRATETGKPLLAWRLKGTGKDPLRVYVNANIHAGEVEGKEAIQQ
                     VVRELLQGRHPELRRNLDLVILPAYNADGTDALDPAIRPWQPNPSESGVGRRENALGL
                     DLNRDLMRAAAPNTRWLLAMLADFDPAVVMDLHTTNGSTHGFHLTHGPACTLGADPDL
                     LAFNRRMLVEVREQLKTEGMPTYDYGNFTPYRPTAEKPPTAWETYDAHPRLLTNYPAL
                     RNRLAVLSESYVYRSWPDRISDTRRFVLACLGWMAGHRDEVRRQVRGSEQRWADQWRR
                     GPVALPLSAKLKEVERYTFDWVDPIRDDQGRLTGEKTRTSLELPSFVGFEGQDEVPVP
                     AGYLVDAAFAPTVLPLLQAHGLKVLKGGLRPRALPVLHFHETGRKVSPSAYQGVFTLE
                     LQGAWKAEPAAKKLQLAWTPADLDRALYIPLDQPLGRLAFYLLDPRSTDSLAFWGLFH
                     SALIRGNGMWGEPPRFPILAVGPAASPASGAVQLPEPRTQE"
BASE COUNT          521 a         1311 c         1259 g          503 t
ORIGIN      
        1 gtccaggcgg cggtgtcggg gccgtcggga acctgcactg gcgccacgcc ccagggcgcg
       61 gcgctgaggc cggaggcgcg gccgagggcc gcgaagggca cgcccgtctc ctgcgccagg
      121 aggtccgcca gcagccggta gttcagatcg gagtaggtcg ccaggcccgg cgtggcgccg
      181 cggaggaggg gatggtcggg caggggccgg gcaaggaggc tggccagggg ctcggccgtg
      241 aagggccgcc agggcggcag ccccgagccg tgcgacagca gctgtcgcac cgtcagcggc
      301 gacgggcggt cggggaagcc cagggcccag cggcggtcgg cgtccaggtc aaggaaggcc
      361 agcgccagcg gggccgtcac cagaggcttg gcgagggagg cgaggtcgta gaagggcttc
      421 acgcccggtg catctccgcc aggctgcgcg ccacggcctt ctgcacctgg tcggccacgc
      481 gcatggcctc ctggccctct tcccaggtga cgccctcctg gcccttgccc aggcaggcgg
      541 cgtggaaggc ctcgatctcc aggcgcaggg gctcgccctc ctcgatgtcg gcggtctcgg
      601 gcttcacctc aggaccgtca gggcccatga ccaggcggag cagctccagc ttctgtgcgg
      661 cgaaatcgag gctggcgtat tccttgtcgc cgaaggcgcg cagggtgcgc tccttcttgc
      721 gggccacgcg gctggcggtc acggtggcga aggcgccgcc ttcgaatttc aggcgcgcgt
      781 tcaccaggtc ggcgtaaggc gtcaacacgg gcacgcccac ggcctccaca tcgatgacgg
      841 gccgtcccac gagggcgcgc agcaggtcga ggtcgtggat catcacgtcc atcaccacgt
      901 ccacttcgag gctgcgggcg gggaagggcg acacgcgcac ggcctcgagg aagcggggct
      961 tgaagccgcg ctcccgcagg gcggccaccg ccggattgaa gcgctccagg tggcccacct
     1021 gggccacgag gccgggcttc gcggcccggg cggcgttcag ggcctgcagc agggcgacgc
     1081 cttcttcgag cgaagcggcc agtggcttct ccatgagcac gtgcttgccc gcctggaggg
     1141 cctgggcgcc cagccggtgg tggaagcccg tgggcgcagc gatctggacg gcatccacct
     1201 cggcgagcac ctggtccagg gacgcggccc agggggcgct gaacttcgcg gcgatctcgg
     1261 gaccgcgggt cgcgtcggga tccaccaccg ccaccaggac ggcgtccggc gcggaggcgg
     1321 cgattctcgc gtggtgctgc ccgaggtgtc ccacaccgac gaccgcgact ttcaacttgg
     1381 acatggctgc ctcccgaccg acccagccta tcagggctgc taccctggag ccttcttccc
     1441 gaggcgacca tgaatctcaa gcttgaagcg gtaaacctgg tccgttggct gcacttcgtg
     1501 gccctggccg tgggcggcgg cgccgcggtg gtggccctcc tgctctccgg gttcgaagag
     1561 agccgcgagg atctccaggg cctggcggcc acggtctggg ccaaggtggt ggcctggtcc
     1621 ttccgcctgg cgctgatcgc cggcatcggc ctcctgatgc tcatgctgca gggcggccag
     1681 aaccccctga aagacggcca ctacctccac atcaagctgg tgctggtgtt ggtcctcgtg
     1741 ggtctctccg aaatggcacc gaaggccctc gcggcccgca agcgcggctc cgccctgctc
     1801 gtgctggtgc tcttcctcgc ctccagcttc atcgtctaca acaagggcct gttcggcggc
     1861 cgccccaagg cgggaccgca gatcccggtg accgcggaaa cgctgacggc ccgctgagcc
     1921 atgcggagcc tgctgctggc cctggcggga agctgtctgt tcgccgggtg gccccagacc
     1981 gtccctgaac gcacccagtt cgcccggacc tccaccgtgc aggaggtccg ggccttcatg
     2041 gacgccctgc gccggcaggc acccggcctg gagccctacc atccgaaagg cgccccccgc
     2101 gccacggaga cgggcaagcc cctcctcgcc tggcgcttga aagggacggg gaaggatccc
     2161 ctccgcgtct acgtgaacgc caacatccac gccggcgagg tggagggcaa ggaggccatc
     2221 cagcaggtgg tgcgcgagct gctgcagggg cgccaccctg agcttcgccg gaacctcgac
     2281 ctggtgatcc tcccggccta caacgccgat ggcaccgatg ccctggatcc ggccatccgg
     2341 ccctggcagc cgaacccatc cgaaagcggc gtgggccggc gcgagaacgc gctgggcctc
     2401 gacctgaacc gggacctgat gcgggccgcg gcccccaaca cccgctggct gctggccatg
     2461 ctggccgact tcgaccccgc ggtggtgatg gacctccaca ccaccaacgg cagcacccac
     2521 ggcttccacc tcacgcatgg ccccgcctgc accctggggg cggatcccga cctgctggcc
     2581 ttcaaccgcc ggatgctggt ggaggtgcgc gagcagctca agaccgaggg catgcccacc
     2641 tacgactacg gcaacttcac gccgtaccgc cccacggccg agaagccccc cacagcctgg
     2701 gagacctacg acgcccaccc gaggttgctc acgaactacc cggcgctcag gaaccgcctc
     2761 gcggtgctct cggagagcta cgtctatcgc agctggcccg accgcatctc ggacacgcgc
     2821 cgcttcgtgc tggcctgcct gggctggatg gccgggcacc gggacgaggt gcgccgccag
     2881 gtgcgcgggt cggagcagcg ctgggccgac cagtggcgcc gggggccggt cgcgctgccc
     2941 ctgtccgcga agctgaagga ggtggagcgc tacaccttcg actgggtgga tcccatccgc
     3001 gacgaccagg gccgcctcac gggcgagaag acccgcacca gcctcgagct gccgagcttc
     3061 gtgggcttcg agggacagga cgaggtgcca gtgccggcgg gctacctggt ggacgccgcg
     3121 ttcgcgccga cggtgctgcc cctgctgcag gcccacggcc tgaaggtcct gaagggcggg
     3181 ctccggcccc gcgccctgcc ggtgctccat ttccacgaga ctgggcggaa ggtctccccc
     3241 tcggcgtacc agggcgtgtt caccctcgag ctgcagggcg cctggaaggc cgagcccgcc
     3301 gcgaagaagc tgcagctggc ctggaccccc gccgacctgg accgggccct ctacatcccc
     3361 ctggatcagc ccctcggtcg cctcgccttc tacctgctgg atccgcgcag caccgacagc
     3421 ctcgcattct ggggcctgtt ccacagcgca ctgatccgcg gcaacggcat gtggggggaa
     3481 ccgccacgct tccccatcct cgccgtcggc cccgcggcct ccccggcctc gggcgcggtc
     3541 caactgccgg aacctcgcac ccaggaatag gccggcctgg tcagggctgc gcct
//
LOCUS       DATGWW010000626         1660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_207253, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000626 DATGWW010000000
VERSION     DATGWW010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207253"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..1104)
                     /gene="asd"
                     /locus_tag="VK150_09170"
     CDS             complement(172..1104)
                     /gene="asd"
                     /locus_tag="VK150_09170"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00163.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaetidylserine decarboxylase"
                     /protein_id="HLP31520.1"
                     /translation="MHLSWPPPARVALILALLWAIYVLVWTPGPLSLRALGLYPKRLG
                     STFVGWVATRSLPEAWREPLLGRFAGHFGINLAEAEFPLRGYASLQALFTRRLKPGLR
                     PQDPAAPGAVNSPVDGRIIACGRIEAGTAIQAKGLPYRIAELLKHDPRAARFEGGTFL
                     TLYLSPKDYHRIHVPVEGRVSSVSRVEGELWPVNDASTGNIPRLYERNRRATWTALGT
                     GADEGLEVAAVLVGATHVGGVVIDGRWLGGRPLPKQGGLAVDQLPCAPGDDLGTFEFG
                     STVVLLIGGPRAKDWTASRTAGDVNVGQRLGAYR"
     gene            1152..>1660
                     /locus_tag="VK150_09175"
     CDS             1152..>1660
                     /locus_tag="VK150_09175"
                     /inference="COORDINATES: protein motif:HMM:NF017747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HutD family protein"
                     /protein_id="HLP31521.1"
                     /translation="MPWRRLKPADARAMPWRNGGGTTLEFLMEPPGASLESGFGWRVS
                     SATVGVSGPFSAFPGLDRWLLLLEGAGFDLDFGPRGRVDLSRPLAPIRFSGDWPAEAT
                     LLEGPSTDLNLMVDPRQWRSQVDVLTLVSPRALPLRADTTLLFLARGTASVPAWDLHL
                     GHHHLLRVAG"
BASE COUNT          225 a          593 c          610 g          232 t
ORIGIN      
        1 cctgaagctt ctcgatgccc tgctgcaggg cgccgtcgcc caggcccgtc agctcgcgga
       61 gccgggccag gtcgagcacc tcgccggcgg cggtgaagag ggcctccagg gcccccggca
      121 ggtcgccgcc ctcatcccag aggggatcct gatggaagat ctcggaatcg ttcaccggta
      181 ggctcccagc cgctgcccca cgttcacgtc gcctgccgtg cgggaggcgg tccaatcctt
      241 cgcccgtggc ccgccgatga gcagcaccac ggtggagccg aactcgaagg tgcccaggtc
      301 gtcgcccggc gcgcagggca gctggtccac ggcgagaccg ccctgcttcg gcagggggcg
      361 ccccccgagc cagcggccat cgatcaccac gccgcccaca tgggtcgcgc ccaccagcac
      421 ggcggccacc tccaggccct cgtccgcgcc ggtgcccagg gccgtccagg tggcgcggcg
      481 gttccgttcg tacagacggg ggatgttgcc ggtgctcgcg tcgttcacgg gccagagctc
      541 gccctccacc cggctcacgg aactgacgcg gccctccacc ggcacatgga tgcggtggta
      601 gtccttgggc gacaggtaga gggtgaggaa ggtgccgccc tcgaagcggg cagcccgggg
      661 atcatgcttg agcagctccg cgatgcggta gggcaggccc ttggcctgga tggcggtgcc
      721 ggcctcgatg cggccgcagg caatgatgcg gccgtccacc gggctgttca cggcccccgg
      781 cgcggcgggg tcctggggcc tgagcccggg cttcaggcgc cgcgtgaaga gggcctggag
      841 gctggcgtag ccgcggaggg ggaactccgc ctctgccaga ttgatgccga agtgccccgc
      901 gaaacggccc agcagcggct cgcgccaggc ctccggcagg gagcgggtgg cgacccagcc
      961 cacgaaggtg gagccgagcc gcttggggta gaggcccagg gcccgcagcg acaggggacc
     1021 gggggtccac accaggacat agatcgccca gagcagagcc aggatgagcg ccacgcgcgc
     1081 cggtgggggc caggacagat gcatggctcc aggatacccg cctaggatgg agccatgcat
     1141 aggatggacc gatgccgtgg cgccgcctga agcctgctga cgcccgcgcc atgccctggc
     1201 ggaatggcgg gggcaccacg ctggaattcc tgatggaacc gcccggcgcc tccctggagt
     1261 cggggttcgg gtggcgcgtg agctcggcga cggtgggcgt ctccgggccc ttctcggcct
     1321 tcccggggct cgaccgttgg ctgctcctgc tggagggtgc cggcttcgac ctggatttcg
     1381 gtccgcgcgg ccgtgtggac ctcagccggc ccctggcgcc catccgcttc agcggcgact
     1441 ggcccgccga ggccaccctg ctggagggcc ccagcacaga cctcaatctg atggtggatc
     1501 cgcggcagtg gcggtcgcag gtcgacgtcc tcaccctggt ttcgccccgg gcgctgccgc
     1561 tccgggcgga taccaccctt ctgttcctgg cccggggcac ggcctcggtg ccggcctggg
     1621 acctgcacct ggggcatcac cacctgctcc gcgtggcggg
//
LOCUS       DATGWW010000627         2863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_392255, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000627 DATGWW010000000
VERSION     DATGWW010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2863
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392255"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..337
                     /locus_tag="VK150_09180"
     CDS             <1..337
                     /locus_tag="VK150_09180"
                     /inference="COORDINATES: protein motif:HMM:NF014821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Ada metal-binding domain-containing protein"
                     /protein_id="HLP31522.1"
                     /translation="VTMNRALLALLVAASVAMVAQESKAKASGAKASGAKAVEAKAPA
                     AKAAPVAKPAPAKPSASGALVANKDSKTYHRAECKSAAKIKEANRSSFASAAEADKAG
                     YKACKVCKP"
     gene            375..731
                     /locus_tag="VK150_09185"
     CDS             375..731
                     /locus_tag="VK150_09185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31523.1"
                     /translation="MKLLFPILLGAALVLPAQIPTKADLKGKADAAVDKGKAKADDKA
                     EQTKAKADTKAEGAKAKADAKAGGVPVAGDKVKAATAKGEGAAKAGTGKAKGKTKAGT
                     GKGAAKAKAVTEKVAQ"
     gene            complement(798..1661)
                     /locus_tag="VK150_09190"
     CDS             complement(798..1661)
                     /locus_tag="VK150_09190"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HLP31524.1"
                     /translation="MSDPEAKILQTFTSGPLRLAVLKRDPVPAKLLPARDAWTLLQPT
                     HPVRVCTGEDREEGVIRSGDLALLLPGFGHTLKRHHSNTPFGFTALFMEGPFPEPLLS
                     ALQHPPRKWQESSFAVLRSLSLKQLFSIFTQELSNPDGVQLMTRELFLILLGAELSRL
                     TEKEDRGRFPYRLNRSTLQLVLDHMEVHIGAKNSVPELATMARCTPDHFIRLFREATS
                     TTPHQYLIERRLQRAVTLLANGERPSDVAKILGFYDASAFTRAFKRRFGVPPSEYAQE
                     AYDRQFPKKPS"
     gene            complement(1768..2463)
                     /gene="purQ"
                     /locus_tag="VK150_09195"
     CDS             complement(1768..2463)
                     /gene="purQ"
                     /locus_tag="VK150_09195"
                     /inference="COORDINATES: protein motif:HMM:NF002957.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HLP31525.1"
                     /translation="MVRMAIVTFPGSNCDYDCFKAAELVGMQPRFVWHREMSIGDADM
                     VVLPGGFSYGDYLRCGAIAALAPIMADVKRHADNGGLVLGVCNGFQILCEAQLLPGAL
                     LRNESLRFIHANVHLRVERADLPFTRAMKAGEVFQVPIAHAEGNFTLDPADLADLEAR
                     GGVAFRYCSPAGEIGEDHVPNGAMNGIAGIVNVQGNVLGMMPHPERAVDPRLGPTGGL
                     GMFWSLAEAFSRA"
     gene            complement(2466..2738)
                     /gene="purS"
                     /locus_tag="VK150_09200"
     CDS             complement(2466..2738)
                     /gene="purS"
                     /locus_tag="VK150_09200"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: protein motif:HMM:NF004630.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HLP31526.1"
                     /translation="MNYQVEVRVTPRAGILDPQGKAVESALHTLNFPEVDEARVGRLI
                     RLRIAADSEAAARERVEAMCRQLLANPVTEDYEIALSQPQAESVGT"
BASE COUNT          502 a          917 c          991 g          453 t
ORIGIN      
        1 agtcaccatg aaccgagccc ttctcgccct cctcgtcgcc gcctccgtgg cgatggtcgc
       61 ccaggagtcc aaggccaaag ccagtggggc caaagccagc ggggccaaag ccgtggaagc
      121 caaggcgccc gcggcgaagg ccgcccccgt cgccaagccc gcaccggcca agccttccgc
      181 ctccggcgcc ctggtcgcca acaaggattc caagacctat caccgcgccg agtgcaagag
      241 cgcggcgaag atcaaggaag cgaaccgttc ttccttcgcc tcggcggccg aggccgacaa
      301 ggccggctac aaagcctgca aggtttgcaa gccctgacgt ccgctccatt ctctaccccc
      361 tcccggaggc atccatgaag ctcctcttcc ccatcctgct cggcgcggcc ctggtcctgc
      421 cggcccagat ccccaccaag gccgacctga agggcaaggc cgacgccgcg gtcgacaagg
      481 gcaaggccaa ggccgacgac aaggcggaac agacgaaggc caaggccgac acgaaggctg
      541 agggcgccaa ggccaaggcg gatgccaagg ccggcggcgt gccggtggcc ggggacaagg
      601 tgaaggccgc caccgccaag ggcgaaggcg cggccaaggc cggcacgggc aaggccaagg
      661 gcaagaccaa ggccggcacc ggcaagggcg cggccaaggc caaggccgtc accgagaagg
      721 ttgcccagta atccgattcc cgctacccat gaaaagggcg ccgtccggcg cccttttcat
      781 gccaagccca ggccggttca gctgggcttc ttcggaaact ggcggtcgta ggcttcctgc
      841 gcgtactcgc tggggggcac gccgaagcgg cgcttgaagg cgcgggtgaa ggcgctggca
      901 tcgtagaaac cgaggatctt cgccacgtcg ctggggcgct cgccgttggc cagcagggtg
      961 acggcgcgct ggaggcgccg ctcgatcagg tactggtggg gcgtggtgct ggtggcttcg
     1021 cggaagaggc ggatgaagtg gtccggcgtg cagcgggcca tggtggccag ctcgggcacg
     1081 ctgttcttgg cgccgatgtg gacttccatg tggtccagca ccagctgcag ggtggagcgg
     1141 ttcaggcggt aggggaatcg gccccggtcc tccttttccg tcaggcggga gagctccgcg
     1201 cccagcagga tcaggaagag ttcccgggtc atgagctgca cgccgtcggg gttcgacagc
     1261 tcctgcgtga agatgctgaa gagctgcttg aggctgaggc tgcgcagcac ggcgaagctg
     1321 gattcctgcc acttgcgggg cgggtgctgg agggccgaaa gcagcggctc ggggaaggga
     1381 ccttccatga acagcgccgt gaagccgaag ggggtgttcg agtgatgccg cttgagcgtg
     1441 tgcccgaagc cgggcagcag cagggccagg tcgccggagc ggatcacgcc ctcctcgcgg
     1501 tcttcgccag tgcagacgcg cacggggtgc gtgggctgca gcagggtcca ggcgtcacgc
     1561 gccggtagca gcttggcggg gacgggatcc cgcttcagca cggccaggcg gagtggtccg
     1621 ctggtgaagg tttggaggat tttggcttct gggtcgctca tggctcggga ataaacagat
     1681 atgcctacgg aggcgtcccg ggaaggatga caggaaaaca ttcctccgga agtggaattt
     1741 tcacagcctc ttttttctgg gcaaccttca ggctcgactg aaggcttcgg ccaggctcca
     1801 gaacatgccc aaaccacccg taggtccaag ccttggatct acggcccgtt ccggatgggg
     1861 catcatgccg agcacgttgc cctggacgtt cacgatgccc gcgatgccgt tcatggcccc
     1921 gttgggcacg tggtcctcgc cgatctcccc agccggggaa cagtagcgga aggcgacccc
     1981 gccccgggcc tccaggtcgg ccaggtcggc gggatccagg gtgaaattgc cctcggcgtg
     2041 ggcgatgggc acctggaaga cctcgccggc cttcatggcc cgggtgaagg gcaggtcggc
     2101 ccgctccacc cgcaggtgga cgttggcatg gatgaagcgc agggattcgt tgcgcagcag
     2161 ggccccgggc agcagctggg cctcgcagag gatctggaag ccgttgcaca cgcccagcac
     2221 taggccgccg ttgtccgcgt ggcgcttcac gtcggccatg atgggcgcca gggccgcgat
     2281 ggcgccgcag cgcaggtagt cgccgtagct gaagccgccc ggcagcacca ccatgtccgc
     2341 atcgccgatc gacatctcgc gatgccagac gaagcgcggc tgcatgccga ccagctcggc
     2401 cgccttgaag cagtcgtagt cgcagttcga gccgggaaac gtcacgatcg ccatgcgaac
     2461 catggtcagg tccctacgct ttccgcttgc ggctggctca atgcaatctc gtagtcttcc
     2521 gttaccgggt tcgccagcag ctgccggcac atggcttcga ctcgctcgcg cgcggctgct
     2581 tccgagtccg cggctatgcg caggcgaatc agccggccga cgcgggcttc gtcgacttcc
     2641 gggaaattga gcgtgtgcag cgcgctctca acggctttgc cttgcggatc gagaattccg
     2701 gcccgcggtg tcacgcgcac ttcgacctgg tagttcaagc tgtgccctct cggtcttcag
     2761 gaggattgtc gcgctggcga cgacgacgcc gacgacgata gcgcggcaac aaatgtcgtt
     2821 tgggtgacaa tgattcatag ctgatttcgc gtagctcggc gcc
//
LOCUS       DATGWW010000628         3190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_392308, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000628 DATGWW010000000
VERSION     DATGWW010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3190
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392308"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            37..1857
                     /locus_tag="VK150_09205"
     CDS             37..1857
                     /locus_tag="VK150_09205"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLP31527.1"
                     /translation="MTVSKRTLNLFPIQGLRPEDDRRLNLSARRLVRSFILVSLILVL
                     TELTIMVLLEPIFLDDHLTMAFVDSGTLILVCFPTIYYLLIKPMARHLFEKAEAERAL
                     QEMQATNEFIRHDAAERIRAETLERTKADARIQFQARILAVVQQAVVATGKGGVILYW
                     NRFAEWMFGWSEDEVREQTLAKVTGFTSEAARSGLSGFGAVKGWTGEVKALRRDGTAF
                     PAYLTCSPIWRADGSVAGFVYTFIDITDRKAAEAAIRDSEEKYSTVVENSPTGIFIYS
                     GGRLAFGNQRFFQMVGRSQEDLARMEAADIIHPDDWPSVQAMWRQRLAGTSANQDYEC
                     RIIHSGGETRWIAGRSALIRYGGQPALLGNIQDITERHKAEQALRDSREALHKLSARL
                     MSAQENERQRVARELHDSLGQSLSAVKFIVERALDGQEDPAGHQQTTLRTVVPVIQGA
                     VEEVRRISMALRPTTLDDLGLLATIAWFTREFQTAYPHMEVDRLVEVEEFEVPEAFKT
                     SIFRILQEAMNNAAKHSQATRITVALRQVLGDLQLLVADNGVGFSPSDVRRGTSGGGF
                     GLVSMRERADLFGGSLIITAAPREGCTIIARWPLPEEATS"
     gene            complement(1847..2509)
                     /locus_tag="VK150_09210"
     CDS             complement(1847..2509)
                     /locus_tag="VK150_09210"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLP31528.1"
                     /translation="MAPGQKHRLVIAEDHTILREGLKALLAARPELEVVGEATDGREA
                     VRCAEDLKPDLMMLDLSMPRSNGLEALKEIKRVSPGTRVLVLTVHKTEDYVFTALQAG
                     ADGYVLKDSSSSELMMAVRSVLNGERYLAPAIASTVVSGYLGVKEPGAMRPGFDDLST
                     REREVLKLIAEGYRTKDIAEYLCISPKTVEKHRANLMDRLKLHTVSALTAYAIEKGLV
                     TK"
     gene            complement(2638..>3190)
                     /locus_tag="VK150_09215"
     CDS             complement(2638..>3190)
                     /locus_tag="VK150_09215"
                     /inference="COORDINATES: protein motif:HMM:NF012982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008138 - protein
                     tyrosine/serine/threonine phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dual specificity protein phosphatase family
                     protein"
                     /protein_id="HLP31529.1"
                     /translation="SANPPGDPGDVAEGRMSRLLFLLLPALVLQAQDSVIPGAVEVRS
                     GVFVLRGSPNDATCAAIKKQHITHVVDLRRDGEPSLNCESESIRMQEMGVQYLRYAVT
                     KTPPNGDFDFLRSFLKNLPRGSKVLLHCNNGNRAAAMVCPWLVLDKGMPLEEAMRIAR
                     EAGMKLPETEEAVRRYIGGKASA"
BASE COUNT          538 a         1101 c         1015 g          536 t
ORIGIN      
        1 ttcttgcatg gccggcctgc cgccccgagg tgagtcgtga cagtgtccaa acggacgctc
       61 aatctgttcc ccatccaggg gctccggcca gaggatgacc ggcggctgaa cctgtccgcc
      121 cgcaggctgg tccgctcctt catcctcgtc tcgctgatcc tggtgctcac cgagctgacc
      181 atcatggtgc tccttgagcc catcttcctc gacgaccacc tcaccatggc cttcgtggac
      241 tccgggacct tgatcctggt ctgcttcccg accatctact acctgctcat caagcccatg
      301 gcccgtcacc tgttcgagaa ggccgaggcg gaacgggcgc tccaggagat gcaggccacc
      361 aacgaattca tccgccacga cgcggccgag cggatccggg ccgaaaccct ggagcgcacc
      421 aaggccgatg cccgcatcca gttccaggcc aggatcctcg ccgtcgtcca gcaggccgtg
      481 gtggccacgg gcaagggcgg cgtcatcctc tactggaacc gcttcgccga gtggatgttc
      541 gggtggagcg aagacgaggt gcgggaacaa accctcgcca aggtcaccgg tttcacttcc
      601 gaggccgcac gcagcggcct gtccggcttc ggcgcggtga agggctggac cggggaggtg
      661 aaggcccttc gccgcgacgg caccgcgttc ccggcctacc tcacctgctc gcccatctgg
      721 cgggcggacg gctcggtggc tggcttcgtc tacaccttca tcgacatcac cgaccgcaag
      781 gctgccgaag ccgccatccg cgactccgag gagaagtaca gcaccgtggt ggagaactcc
      841 cccacgggga tcttcatcta cagcggcggg cgtctcgcct tcggcaacca gcggttcttc
      901 cagatggtgg gacggtccca ggaggacctt gcgcgcatgg aggccgcgga catcatccat
      961 cccgacgact ggccatcggt gcaggccatg tggcgccagc gcctggcggg aaccagcgcc
     1021 aatcaggact acgaatgccg gatcatccac tccggcggcg agacgcgctg gatcgcgggc
     1081 cggtctgcgc tgatccgcta cggcggccaa ccagccctcc tcggcaacat ccaggacatc
     1141 acggaacgac acaaggccga acaggccctg cgggattccc gcgaggcgct ccacaagctc
     1201 tcggcccggc tcatgtccgc ccaggaaaac gagcggcagc gcgtggcccg ggagctgcac
     1261 gacagcctgg gccagtcgct cagcgccgtg aagttcatcg tggagcgcgc cctcgacgga
     1321 caggaggacc ccgctggcca ccagcagacg acgctgcgaa ccgtcgtgcc tgtgatccag
     1381 ggcgccgtgg aggaggtgag gcgcatttcc atggccctcc gccccaccac cctggatgac
     1441 ctgggcctcc tcgccaccat cgcctggttc acacgggaat tccagaccgc ctatccccac
     1501 atggaagtcg accgcctggt cgaagtggag gagttcgaag tgcccgaggc cttcaagacg
     1561 agcatcttcc ggatcctcca ggaggccatg aacaacgccg ccaagcacag ccaggccacc
     1621 cggatcaccg tggccctgcg acaggtgctg ggcgacctcc agctcctggt ggcggataac
     1681 ggcgtgggct tcagcccctc ggatgtccgc cggggcacct cgggcggagg cttcggactg
     1741 gtgtccatgc gtgagcgggc ggacctgttc ggcggctctc tcatcatcac tgccgcgccg
     1801 agagaaggct gcacgatcat cgcccgctgg cccctgcccg aagaggctac ttcgtgacca
     1861 gccccttctc gatggcatag gcggtcaggg cggacactgt gtggagcttc aggcggtcca
     1921 tgaggttcgc acggtgcttt tccacggtct tcgggctgat gcagaggtac tcggcgatgt
     1981 ccttggtgcg gtatccctct gcgatgagct tgaggacctc ccgctcccgg gtggacaggt
     2041 cgtcgaagcc cgggcgcatg gcgccgggct ccttcacccc gaggtagccg gagaccaccg
     2101 tgctggcgat ggccggcgcg aggtagcgct ctccattgag gacgctgcgc accgccatca
     2161 tgagttccga cgacgaggag tccttgagaa catagccgtc ggcgcccgcc tgcagcgcgg
     2221 tgaacacgta gtcctccgtc ttgtggacgg tcagcacgag cacccgggtt ccggggctca
     2281 cccgcttgat ctccttcagc gcctccagcc cgttggagcg cggcatggag aggtcgagca
     2341 tcatcaggtc cggcttcaga tcctccgcgc aacgcaccgc ctcccgtccg tcggtggctt
     2401 cgcctaccac ctcaagttcg ggacgggctg ccagcagcgc cttcaagcct tcgcggagaa
     2461 tcgtatgatc ctccgcgatc acgagcctgt gtttctgtcc tggagccatg ccttctcttg
     2521 ggaacggggt ggctctcagg ctagcgatgt cccatggttc ctgaccaggg ttttcacgga
     2581 ggcagccgag aagcgccgga tctcaacgac cggccctgcc gggcgcctgg cccggaatca
     2641 ggcgctcgcc ttgccgccga tgtagcgccg cacagcctcc tcggtctcgg ggagcttcat
     2701 cccagcctcc cgggcaatcc tcatggcttc ctcaaggggc atgcccttgt cgagcaccaa
     2761 ccaggggcag accatcgcgg cggcccggtt cccgttgttg caatgcagca ggaccttcga
     2821 gcccctgggc aggttcttca ggaagctgcg caggaagtcg aaatcgccgt tcggcggggt
     2881 cttcgtgacg gcgtagcgca gatactgaac acccatctcc tgcatgcgga tggactcgga
     2941 ctcgcagttc aggctgggct cgccgtcgcg ccgcaggtcc accacatggg tgatgtgctg
     3001 tttcttgatg gcggcgcagg tggcgtcgtt cggcgacccc cggagcacga aaacaccgga
     3061 gcgcacctcc accgcgcctg gaatgaccga gtcctgggcc tggagcacca gggccgggag
     3121 caggaggaac agaagccgag acatgcgacc ctccgcgaca tcgcccggat caccaggcgg
     3181 gttcgcggag
//
LOCUS       DATGWW010000629         1536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_125714, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000629 DATGWW010000000
VERSION     DATGWW010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125714"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VK150_09220"
     CDS             <1..190
                     /locus_tag="VK150_09220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31530.1"
                     /translation="TTDIKGLWTPVFHGRPEWLTGGAFGLEASLPCTLICGAAILLLW
                     RWKGMTPTGAGASTASAS"
     gene            complement(153..686)
                     /locus_tag="VK150_09225"
     CDS             complement(153..686)
                     /locus_tag="VK150_09225"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLP31531.1"
                     /translation="MAQDSSYTVPMSPTLRPSTLADLETHVVHRMAMFRDMEMGTEDG
                     LKRMAEAFRNQLRGWLVTGQCRGLVLEDEGRVVASVLLLLKETVPTPVTPLSVRGYLF
                     NVYTDPSHRRRGLAARLTDAALDLARDLGIEIMELHASLEAEGLYQRMGFVPTSEMRL
                     VMGSGIKTPKQWKHRRQ"
     gene            685..1479
                     /locus_tag="VK150_09230"
     CDS             685..1479
                     /locus_tag="VK150_09230"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLP31532.1"
                     /translation="MHYAALASGSKGNCHALSDGERTLLVDAGISLRQIRQRLEAVGW
                     ATDSVQALALTHEHSDHIGALGVILRRTHWTILATAETRRAAGRAQGVEIPHDRWIEL
                     KAGEPVDWAGWRVLPFALPHDAEDPVAYRVEAHGRACAVVTDLGHPTALVADHLQDLD
                     LLVLEANHDVDMLREGDYPPQLKARILSRVGHLSNAAMAELLARACTARLKDVVLAHL
                     SESNNHPDLARFAAEEVLRGSPVALHVAHQRNPLALDGTPDGGSLR"
BASE COUNT          225 a          561 c          518 g          232 t
ORIGIN      
        1 caccaccgac atcaagggcc tgtggacgcc ggtgttccac ggccgccctg agtggctcac
       61 gggaggggcc ttcggcctgg aggcgagcct gccctgcacg ctcatctgcg gcgcggcgat
      121 cctcctgctc tggcggtgga aggggatgac gcctactggc gccggtgctt ccactgcttc
      181 ggcgtcttga tgcctgaacc catcaccagg cgcatctcgc tggtgggcac gaatcccatg
      241 cgctggtaga ggccttcggc ctcgaggctg gcgtgcagct ccatgatctc gatgccaagg
      301 tcgcgggcca ggtccagggc cgcgtccgtg agacgtgcgg cgagcccccg ccgccggtgg
      361 gaggggtctg tgtagacgtt gaacaggtag ccccgcaccg agagcggagt caccggggtg
      421 ggtacggtct ccttcagcag cagcagcacg ctggccacca cgcggccctc gtcttccagc
      481 accaggcccc ggcactgccc cgtcaccagc cagccccgaa gctggttgcg gaaggcctcg
      541 gccatgcgct tcaggccgtc ctcggtgccc atttccatgt cgcggaacat cgccatccgg
      601 tggaccacgt gggtttccag gtcggccagg gtcgaggggc gcagggtggg gctcatgggg
      661 acagtgtacg agctatcctg ggccatgcac tatgccgccc tcgcctccgg ttccaagggg
      721 aactgccatg ccttgtcgga cggcgaacgg accctgctgg tggatgcggg catcagcctg
      781 cgccagatcc ggcagcgcct cgaggcggtg ggttgggcca cggactcggt ccaggccctg
      841 gccctcacgc acgaacactc cgaccacatc ggcgccctgg gcgtcatctt gcgacgaacg
      901 cactggacca tcctggccac ggcggaaacc cgccgcgccg cgggccgggc ccagggcgtg
      961 gagatccccc acgaccggtg gatcgagctg aaggcgggcg agcccgtgga ctgggccggc
     1021 tggcgcgtcc tccccttcgc cctgccccac gatgccgagg atcctgtggc ctaccgggtg
     1081 gaggcccacg ggcgcgcctg cgccgtggtc accgacctgg gccacccgac ggccctggtg
     1141 gccgaccacc tccaggacct cgacctcctg gtgcttgaag ccaaccacga cgtggacatg
     1201 ctgcgcgaag gcgactatcc gccccagctc aaggcccgca tcctcagccg cgtgggccac
     1261 ctcagcaacg ccgccatggc ggagctgctg gcgcgggcct gcacggcccg gctgaaggat
     1321 gtggtgctcg cccatctcag cgaatccaac aaccaccctg atctcgcccg gttcgccgcg
     1381 gaagaggtgc tgcggggaag tccggtggcc ctgcacgtgg cccaccagcg gaaccccctg
     1441 gccctcgacg gcacacccga tggagggagc ctccgatgat ccgacacccc gccgccctgc
     1501 tgctggccct aggcctgatc ctggcccgtc ccctgg
//
LOCUS       DATGWW010000630         1902 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_392393, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000630 DATGWW010000000
VERSION     DATGWW010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392393"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(221..1255)
                     /locus_tag="VK150_09235"
     CDS             complement(221..1255)
                     /locus_tag="VK150_09235"
                     /inference="COORDINATES: protein motif:HMM:NF013381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase family protein"
                     /protein_id="HLP31533.1"
                     /translation="MNPMQRVNMAMSHAEPDQVPLLILATMHGARDLGLSIREYYSRA
                     EHVVEGQLRLRDKFRSDCLNPALYAAVEVEAFGGETVFIEDGPPNAGAPVLRSEEDID
                     RLQVPNLADCSGLQRGLEAIRQLKARVGDEIPILGSVVSPFSLPIMQMGFEHYLDFLY
                     GSRDRFAGLMAVNQAFCVAWANAQLEAGATAIGYADPLASTTLLPRELYLKTGHRIAL
                     DTLPRIKGPVAIHLGSGRGLSLADDLAATGTVAVGVSALEDLGHWKVAARKRFALIGN
                     LNGVEMRRWSAADAEREVKRAISKAGHGGGFILADNHGEIPWQVPDEVLFAIRDATDR
                     WGRYPLTWKE"
     gene            complement(1252..>1902)
                     /locus_tag="VK150_09240"
     CDS             complement(1252..>1902)
                     /locus_tag="VK150_09240"
                     /inference="COORDINATES: protein motif:HMM:NF014375.4"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HLP31534.1"
                     /translation="PRGADVDDLSGDLRCALESLERSRVAKVLETAIQRHSPLEVVES
                     LIRPALEAVGEDWSAGKIALSQVYMSGRICEDILGDLLPAAAQARGASPRCAIAVLSD
                     YHLLGKRIVLSVLRACGYDVHDYGRMEPQALVTRVLADQVDILLISVLMLPAALRVRE
                     VRAGLDARGSRTRIVVGGAPFLFDPGLWQEVGADAMGRHAADAEAILRRWAGEGAP"
BASE COUNT          299 a          685 c          628 g          290 t
ORIGIN      
        1 ccctggagca ggtccttcgc gcaggcccgt ccgaggatca acacctgaga gcacccggcg
       61 ggcaccaggg gacggagttc ttcccaggtc atcgccggca ggccgcagcg ggcatcgtag
      121 aaggctgcct ggacgtccat ccatccttcc gctgccaggg cacctctgac ttcgcgttca
      181 aaattcctgc aggtgagcag gcacagggtc gcggccatgg ctactccttc caggtcaggg
      241 ggtatcgtcc ccagcggtcc gtggcgtcgc ggatggcgaa caggacctca tcaggcacct
      301 gccaggggat ctccccgtgg ttgtccgcca ggatgaatcc cccgccatgg ccagccttgg
      361 agatggcccg cttcacttcc cgttccgcgt ccgccgcgga ccatcggcgc atttccacgc
      421 cgttcaagtt gccgatgagg gcgaaccgct tcctcgccgc caccttccag tggcccaggt
      481 cctccagggc gctcacgccc accgccacgg tccccgtggc cgcgaggtcg tccgccaggc
      541 tgagtccgcg ccccgagccc agatggatgg cgaccgggcc cttgatgcgc ggcagggtgt
      601 ccagggcgat gcggtgaccg gtcttcaggt agagctcccg gggaaggagg gtggtcgacg
      661 ccagcggatc cgcgtacccg atggcggtgg cgccagcctc tagctgcgcg ttggcccacg
      721 ccacgcagaa cgcctggttg accgccatga ggccggcgaa tcggtcccga ctcccgtaca
      781 ggaaatcgag gtagtgctcg aagcccatct gcatgatggg cagtgagaag ggcgagacca
      841 ccgagccgag gatggggatc tcgtcgccca cccgcgcctt cagttgccgg atggcttcga
      901 gcccgcgctg aagcccgctg cagtccgcca ggttcggaac ctgcaggcgg tcgatgtcct
      961 cctcgctccg gagcacgggg gcgccggcat tgggcgggcc gtcctcgatg aagacggtct
     1021 caccaccaaa ggcctcgacc tccaccgcgg catagagggc cgggttgagg cagtcgctcc
     1081 ggaacttatc ccgcagccgc agctggccct ccaccacatg ctccgcgcgg gaatagtact
     1141 cccggatgct gagccccagg tcccgcgcac cgtgcatggt ggcgaggatc agcaggggaa
     1201 cctggtccgg ctcggcgtgg ctcatcgcca tgttgacccg ctgcatgggg ttcatggtgc
     1261 cccctcgccg gcccaacgcc gcaggatcgc ctccgcatcg gccgcgtggc gccccatcgc
     1321 gtccgcaccc acttcttgcc agagtccggg gtcgaacagg aacggggcgc cgcccaccac
     1381 gatccgtgtc cggcttcccc gggcatcgag acccgcccgg acctcccgca ccctgagggc
     1441 ggccgggagc atcaggaccg agatcagcag gatgtccacc tggtcggcga gaacgcgcgt
     1501 caccagggcc tggggctcca tgcgcccgta gtcatggacg tcgtagccgc aggcgcgcag
     1561 caccgaaagc acgatgcgct tgccgagcag gtggtagtcg ctgagcaccg cgatggcgca
     1621 gcgcggggag gcgccccttg cctgggctgc ggccgggagc agatcgccca ggatgtcctc
     1681 gcagatccgg ccgctcatgt agacctggga cagggcgatc ttcccggcgc tccagtcctc
     1741 acccaccgcc tccagcgcgg gccggatcag gctttcgacg acttccagcg gggaatggcg
     1801 ctggatcgcc gtctcgagca ccttcgccac ccgcgagcgc tcgagtgatt ccagcgcgca
     1861 acgcaggtca ccgctcagat cgtccacgtc cgcaccccgc gg
//
LOCUS       DATGWW010000631         1689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_207556, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000631 DATGWW010000000
VERSION     DATGWW010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207556"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1433
                     /locus_tag="VK150_09245"
     CDS             <1..1433
                     /locus_tag="VK150_09245"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HLP31535.1"
                     /translation="LSGDADFRSKPLAFAGYGVQIPGGYDDLAGLELKGRVAVIARTV
                     PDLDAFAHLPRGERSLLARLKRLESAKVAGVIVLEEQGLRPLQREEGPVKMDIPVVGV
                     RPEALAEACGDLLGRLKTIKETQKPDSHDFVQAPWTVLSLDLKLSREEAQVPNVVGVI
                     PGRDPKLRKEFIVLGAHMDHLGMGERHSLGGAEARGQVHPGADDNASGTAMVMELARE
                     LKRARPKRSILLLHFAGEEEGLLGSQYWVQHPTHPLESVKFMLNFDMVGRLDLQAPKL
                     MMGGLGAPKSALEAAKAFVPKGFTVSVDVGAAVGGSDHMSFSQAKIPTFFFFTGIHGE
                     YHRPTDTADRINFPGMAKLAAFGKTLTLDLANAKTLPAFDPETAKIPMKGDGGPMRIA
                     FGTIPDYADNPKGFRINGVSKGSTAETIGLQAGDILIQFGDKPVKSIYDFMGALGAYK
                     PGDKAEITWLRGDQVMKAVATLKGRS"
     gene            1430..>1689
                     /locus_tag="VK150_09250"
     CDS             1430..>1689
                     /locus_tag="VK150_09250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31536.1"
                     /translation="MRLATPSGFATEVLLLEEPAREWLPEGDWTLVGDLRLRDHWTRA
                     GMPAPSHALWVSVPEEEKKLRTVIPWLEHWAKVPLHRDATEIG"
BASE COUNT          282 a          608 c          562 g          237 t
ORIGIN      
        1 gcctgagcgg cgacgcggac ttccgctcca agcccctggc cttcgccggc tacggggtcc
       61 agatccccgg cggctacgac gacctggcgg gcctcgagct gaagggccgc gtcgccgtca
      121 tcgcccgcac ggtgcccgac ctggacgcct tcgcccacct gccccggggc gagcggagtc
      181 tcctggcccg cctgaagcgc ttggagtccg ccaaggtggc gggcgtcatc gtcctggaag
      241 aacagggcct ccggcccctc cagcgcgagg agggccccgt caagatggac atccccgtgg
      301 tgggcgtccg gcccgaggcg ctggccgagg cctgcggcga cctgctgggc cgcctgaaga
      361 ccatcaagga gacccagaag cccgacagcc acgacttcgt gcaggccccc tggaccgtgc
      421 tctccctcga cctgaagctg tcccgcgagg aggcccaggt gcccaacgtg gtgggcgtca
      481 ttccgggccg cgatccgaag ctgcgcaaag agttcatcgt cctgggcgct cacatggacc
      541 acctcggcat gggcgagcgg cacagcctgg gcggggccga ggcccgcggc caggtgcatc
      601 ccggcgcgga cgacaacgcc tccggcaccg ccatggtgat ggagctggcc cgcgaactga
      661 agcgggcgcg gcccaagcgc tccatcctgc tcctgcactt cgccggagag gaggagggcc
      721 tgctcggttc ccagtactgg gtgcagcatc ccacccaccc gctggaatcc gtgaagttca
      781 tgctcaattt cgacatggtg ggccgcctcg acctgcaggc cccgaagctg atgatgggtg
      841 gcctgggcgc gcccaaatcc gccctggagg cggcgaaggc cttcgtgccc aagggcttca
      901 ccgtcagcgt ggacgtgggc gcggcggtgg gcggctccga ccacatgagc ttctcccagg
      961 ccaagatccc cacgttcttc ttcttcacgg gcatccacgg cgagtatcac cggcccaccg
     1021 acaccgccga ccgcatcaac ttccccggca tggccaagct ggccgccttc ggcaagacgc
     1081 tgaccctcga tctggccaac gcgaagacgc tgcccgcatt cgacccggag acggcgaaga
     1141 tccccatgaa gggcgacggt ggccccatgc gcatcgcctt cggtaccatc cccgactacg
     1201 ccgacaaccc caagggcttc cgcatcaacg gggtctcgaa ggggtccacc gccgagacca
     1261 tcggcctgca ggccggcgac atcctcatcc agttcggcga caagcccgtg aagagcatct
     1321 acgacttcat gggggccctc ggcgcctaca agcccgggga caaggccgag atcacctggc
     1381 tccgcggcga ccaggtcatg aaggccgtcg ccaccttgaa gggacgttca tgaggctcgc
     1441 caccccatcc ggattcgcga cggaggttct cctgctggag gaacctgcgc gcgaatggct
     1501 gccggagggg gactggaccc tggtgggcga cctgcgcctg cgggaccact ggacccgcgc
     1561 cggcatgccg gcgccaagcc acgcgctgtg ggtgtcggtg cccgaggaag agaagaagct
     1621 gcgcacggtg atcccctggc tggagcactg ggcaaaggtg cccctgcacc gggatgccac
     1681 cgagatcgg
//
LOCUS       DATGWW010000632         2130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_126072, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000632 DATGWW010000000
VERSION     DATGWW010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126072"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1883
                     /locus_tag="VK150_09255"
     CDS             <1..1883
                     /locus_tag="VK150_09255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31537.1"
                     /translation="GSHGQMTYVVDGIPVSDQMHATFSNSLDPSQVESLEVITGGISA
                     EFGGKPVVVVNLTTKSGLGTPDGFEGEASLGLSRFRTAELGFNARGGTDAFGWFASGA
                     ASESDRFLDPVNFENLHNHGKTGRLFSRFDWILGSQDTLRFSASGGRTDRQVANLASQ
                     DLRGQDQRAATTDANASLAWAHLFSPTQNLDASLFFRTSRAELKPSEELSDGFTAGAH
                     RDFPYWAGQDRTLGNLGVQVAFTQRWGKENLTKAGIQRISFPLHERFRFAITDDAQVA
                     DPADPLYAYTPAGGGKVFRLDARLTPVLTSAYVQNDLHLGSFFLALGLRHDTYTVADI
                     SDSLFQPRVGLSYHVRATGTVLRASYDRLMILREHENLALSLSQQAWDLGPNAGTPRQ
                     PLRPERQHSYSYGVEQQLGAAGRVMVEYWEKQSRNAGDNAQFLNTGVLFPVGADRGVF
                     RGMNLRLDLVPIRGWSAYLSLGRTRAIFQAPLVGGLQLEAPEAAPGERFLIDHDQKLS
                     AQAGITFEQGGFTAQAIGRYDSGLVAKDPAEAGGDPDYAFGASMVRLDSEGTWRIRPR
                     TTLDLSASQAWALAGRRKLSLGLSLLNATNARGLYNFLSTFGGTHVIPPRTLAVRVKA
                     AF"
     gene            complement(1916..>2130)
                     /locus_tag="VK150_09260"
     CDS             complement(1916..>2130)
                     /locus_tag="VK150_09260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31538.1"
                     /translation="VAAHARIRPDDQLGVLSQATGRALATLGADLAAAQASLGRAQAA
                     LEVGDGPATTQALRDLEGILSPWRVD"
BASE COUNT          317 a          822 c          692 g          299 t
ORIGIN      
        1 ggggcagcca cgggcagatg acctacgtgg tggacggcat ccccgtctcc gaccagatgc
       61 acgccacttt cagcaacagc ctcgatccct cccaggtgga gagcctggag gtcatcaccg
      121 gggggatctc ggcggaattc ggcggcaagc cggtggtggt ggtcaacctc accaccaagt
      181 ccgggctcgg cacgccggac ggcttcgaag gcgaagcctc cctcggcctg tcccggttcc
      241 gcaccgcgga gctcggcttc aatgcccggg gtgggaccga tgccttcggc tggttcgcca
      301 gcggggccgc cagcgagagt gaccgcttcc tggatccggt caacttcgag aatctgcaca
      361 accacgggaa gaccggccgg ctcttctccc gcttcgactg gatcctcggc agccaggaca
      421 ccctccgctt ctccgcctcg ggcggccgaa ccgaccggca ggtggcgaac ctcgcctccc
      481 aggacctccg gggccaggac cagcgcgccg ccaccacgga cgccaacgcc agcctggcct
      541 gggcccacct cttcagcccc acccagaacc tggacgcttc cctcttcttc cggacctcgc
      601 gggcggagct gaagcccagc gaggagctga gcgacggctt caccgccggc gcccaccggg
      661 acttccccta ctgggccgga caggaccgga ccctcggcaa cctgggcgtg caggtcgcct
      721 tcacccagcg ctggggcaag gagaacctca cgaaggcggg gatccagcgc atcagcttcc
      781 cgcttcacga gcggttccgc ttcgccatca ccgacgacgc ccaggtggcc gatcccgccg
      841 atccgctgta cgcctacacg ccggcgggcg gcggcaaggt gttccgcctc gacgcgcggc
      901 tgacgcccgt cctcacctcc gcctacgtcc agaacgacct ccacctcggc tcgttcttcc
      961 tggccctggg cctgcgccac gacacctaca ccgtggccga catctccgac agcctgttcc
     1021 aaccccgagt cggcctcagc taccacgtcc gggcgacagg cacggtgctg cgcgccagct
     1081 acgaccgcct catgatcctg cgggagcacg agaacctggc cctgtccctc tcccagcagg
     1141 cctgggacct ggggccgaac gccggtacgc cccggcagcc cctgcggccc gagcggcagc
     1201 attcctacag ctacggcgtg gagcagcagc tgggcgccgc cggccgggtg atggtcgagt
     1261 actgggagaa gcagagccgc aacgccggcg acaacgctca gttcctcaat accggcgtgc
     1321 tcttcccggt gggcgcggac cgcggcgtct tccgcggcat gaacctgcgc ctggacctgg
     1381 tgcccatccg cggctggtca gcctacctga gcctgggccg cacccgggcc atcttccagg
     1441 cccccctcgt gggcggcctg cagctggagg cccccgaggc cgcgcccggc gagcggttcc
     1501 tcatcgacca cgaccagaag ctcagcgccc aggccggcat caccttcgag cagggcggct
     1561 tcaccgccca ggccatcggg cggtacgact cgggcctggt ggccaaggat cccgccgagg
     1621 cgggcggcga tccggactac gccttcggcg cgagcatggt gcgcctggat tccgagggca
     1681 cctggcgcat ccggccgcgc accacgctgg acctcagcgc cagccaggcc tgggccctgg
     1741 cggggcgccg gaagctgtcc ctgggcctca gcctcctcaa cgccacgaac gcgcggggcc
     1801 tctacaactt cctcagcacc ttcggcggca cccacgtgat tccgccccgc accctcgcgg
     1861 tgcgcgtgaa ggccgccttc tgatccgaac gcgggacccc ggttcatccc ttcggtcagt
     1921 ccacgcgcca gggcgagagg atgccctcca gatccctgag tgcttgcgtg gtcgccggac
     1981 catcgcccac ctccagagcg gcctgggccc gccccaggct ggcctgggcc gcggccagat
     2041 ctgcgcccag ggtggcgagg gcacggcctg tggcctggga gaggacgccc agctggtcat
     2101 cggggcggat gcgggcgtgg gcggcgactc
//
LOCUS       DATGWW010000633         1912 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_393419, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000633 DATGWW010000000
VERSION     DATGWW010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1912
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393419"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..370)
                     /locus_tag="VK150_09265"
     CDS             complement(<1..370)
                     /locus_tag="VK150_09265"
                     /inference="COORDINATES: protein motif:HMM:NF022077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HLP31539.1"
                     /translation="MPVISLSEGESVGKAVPARGFAPATSQARPRRVLVANGKGGCGK
                     TTLAINIAGSFAAGGRSTALLDYDPQGSSLQWLSQRKGGNPIHGVAAHRRGNAGVTRT
                     FLLRLPTGTERVVLDAPAGIR"
     gene            complement(486..>1912)
                     /locus_tag="VK150_09270"
     CDS             complement(486..>1912)
                     /locus_tag="VK150_09270"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HLP31540.1"
                     /translation="LELASGDGARARFNLPAWRPGEPFSADQPLRGAVQASLGELVWL
                     SLLAPDLVATGRLHGRFALAGTLGRPLLDGQAALSGGQLAIPLLGISLTELHLAVHPD
                     GDAGLRIVAGARSGPGTLTINGRAAAQGDGWGIALKVVGNDVEVARLPQAHIFASPDL
                     QVSVLDRTIHLQGLVVIPKARINLPELAPPVQASSDVVVVDRGEAEARQRPWTVISEV
                     TVRFGDDVRLAGYGLAGRLAGELLVVEPAGGGAVGRGELQILEGKYTSYGQDLTIEEG
                     RLLYGNAPLNNPGIQFRAVRQLEEVKMGGEEVKVGVTVAGRLKKPEVRLYSEPAMDDT
                     DILSWLVLGRPLDTVTADESGMLQRAAVSLGLVGGTELARRVGDQAGLDVVNIQPVQT
                     TSAGGTATNGTTTNGAATGAQPYQAALVLGKYLSPRLYVQYAVGLWDAGNTWEMRYLL
                     DKNWTIKAESGLQSGLDLLYTIEK"
BASE COUNT          308 a          666 c          644 g          294 t
ORIGIN      
        1 ccctgatgcc ggccggcgca tcgagcacca cgcgttcggt gccggtggga agacggagca
       61 ggaaggtgcg ggtgacgccg gcgttgccgc ggcggtgggc cgccacgccg tgaatcggat
      121 tgcccccctt gcgctggctc agccactgga gactggagcc ctgggggtcg taatcgagca
      181 gcgccgtaga acgcccgccc gcggcaaagg aaccggcgat gttgatggcc agggtggtct
      241 tgccgcagcc gcccttgccg ttggcgacca gcacgcgacg cgggcgcgcc tgggaggtgg
      301 ccggcgcgaa accgcgcgcg ggcacagcct tcccgacgga ttcaccctcg gacagcgaaa
      361 tcacgggcat cggggcatag ctcttccagt tgactgcaac ggcttatagt aaccgcgcca
      421 tagctaagcc tgcgatattt caacgggatt ttccatcagg aaagctaata gcttcacaga
      481 atgggtcact tttcgatggt gtagagcaga tcgagcccgc tctgcagtcc actctcggcc
      541 ttgatcgtcc aattcttgtc caaaaggtag cgcatttccc aggtgttacc ggcatcccag
      601 agccccaccg cgtattgcac atagagccgg ggcgacaggt atttgccgag caccagcgcc
      661 gcctggtagg gctgggcgcc ggtggccgcc ccgttggtgg tagtgccgtt ggtggccgtg
      721 ccgccggcgg acgtggtctg caccggctgg atgttgacca cgtcgagccc cgcctgatcg
      781 cccacccggc gggccagttc agtgccaccc accagcccga gggagacggc ggcgcgctgg
      841 agcatgccgg attcatccgc cgtgaccgta tccagcgggc gccccagcac cagccaggag
      901 aggatatccg tgtcgtccat ggccggttcc gaatagagac gcacctccgg ttttttcagc
      961 cttccggcca cggtcacgcc caccttcacc tcttcccctc ccatcttcac ctcctccagt
     1021 tgacgcaccg cgcggaactg gattccggga ttgttgagcg gcgcattgcc gtagagcagc
     1081 cgcccctctt cgatggtgag atcctggccg taggaggtgt acttgccctc caggatctgg
     1141 agttcacccc gtccaaccgc gccgccgccc gccggctcca ccaccagcag ttcgccggcg
     1201 agccggcccg ccagcccgta gccggcgagc cgcacgtcat cgccgaaacg cacggtcacc
     1261 tccgagatga cggtccaggg ccgctgccgc gcctcggcct cgccgcggtc caccaccacc
     1321 acgtcgctgg aggcctggac cggcggcgcc agctccggga ggttgatccg cgccttcgga
     1381 atcaccacca gcccctgcag gtggatggtg cgatcaagca cgctcacctg gagatcgggc
     1441 gaggcgaaga tgtgggcctg cggcaggcgc gccacctcca catcgttgcc gacgaccttc
     1501 agggcgattc cccaaccatc gccctgcgcg gcagcgcggc cgttgatggt gagggtgccg
     1561 ggtcctgaac gggcgccggc cacgatcctg agccccgcgt ccccgtcagg atggaccgcc
     1621 agatgcagtt cggtgagcga gatgcccagg agcgggatgg ccagttggcc gccgctcagg
     1681 gccgcctgcc cgtccagcag cggccggccc agggtgccgg ccagggcgaa gcggccgtga
     1741 agacggccgg tcgccaccag atcgggggcc agcagggaga gccagaccag ttcgcccagg
     1801 gaggcctgga ccgcgccccg caggggctgg tcggcggaga agggctcacc gggccgccat
     1861 gcgggcaggt tgaagcgggc acgcgcgccg tcgccgctgg ccagttccag gg
//
LOCUS       DATGWW010000634         2218 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_393450, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000634 DATGWW010000000
VERSION     DATGWW010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2218
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393450"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(198..797)
                     /gene="recR"
                     /locus_tag="VK150_09275"
     CDS             complement(198..797)
                     /gene="recR"
                     /locus_tag="VK150_09275"
                     /inference="COORDINATES: protein motif:HMM:TIGR00615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HLP31541.1"
                     /translation="MKLPPPLEAVVESLQKLPGVGAKSAQRMALHLLKEGPDAMAHLA
                     HQLQQAAEKVGFCQVCGAFTDQPTCPICLDPRRDPASLVIVAEASNVLSFERSGHFRG
                     RYHVLGGLISPLRGVGPDQLRIRELLKRLEDHAIQEVILATNPTVDGEATASWLARML
                     EPIGVRTTRIGLGLPIGSDLEYADELTLDRAMEGRRPVG"
     gene            complement(931..1233)
                     /locus_tag="VK150_09280"
     CDS             complement(931..1233)
                     /locus_tag="VK150_09280"
                     /inference="COORDINATES: protein motif:HMM:TIGR00103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HLP31542.1"
                     /translation="MDMRFLMKQAQQMQAKMAETQANLRVEGTAGGELVKVTLNGSKE
                     LMGLSIAKDAMDPEDPSMLEDLLLAAFRDAATKVDESMKKQMGGLGAGLNLPGLGL"
     gene            complement(1236..1748)
                     /locus_tag="VK150_09285"
     CDS             complement(1236..1748)
                     /locus_tag="VK150_09285"
                     /inference="COORDINATES: protein motif:HMM:NF021363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2062 domain-containing protein"
                     /protein_id="HLP31543.1"
                     /translation="MTHRDKSHLWARTKRFLADPALEPHHLAWSFAIGLSIAWNPLLG
                     THTGLVLLVCALAKKLHRPLTFLGAFTNNPWTMVPIATASALFGNVLLGRGLALNLSG
                     VDWKSIGWRSFATREGFEAAATMLRPILVPYLLGGFVLSAVAVPVGYFLMLRLAHRLR
                     GPKPSPLSGD"
     gene            complement(1745..>2218)
                     /locus_tag="VK150_09290"
     CDS             complement(1745..>2218)
                     /locus_tag="VK150_09290"
                     /inference="COORDINATES: protein motif:HMM:NF014788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HLP31544.1"
                     /translation="PGDRIYVDQKPGASLRGLRKLAAGQRWDPRRPDADLEAHLAPKP
                     RLGLGLRLAAIPEVHACLDLSDGLSRDLRNLAEASGLSVEVEPDLDEDTLRGGEDYAR
                     CFGAALPQADLEARLGLPLIAVGRAVARGEAPLLAYDGGLLRPLPDLSFDHFGRP"
BASE COUNT          333 a          723 c          818 g          344 t
ORIGIN      
        1 ggcggtcctg gcggggtggc tgtgggcttc cgagcccctg agcgcacgcc tcctggtctc
       61 caccctcctg attctcctgg ccgtccttct cgttcagcgc ggcgagcgct ccgcgaagcg
      121 gctggtggac gaggcgcagc ccggttgaag gaacgaggct cgctgatggg gctaaccggc
      181 agagctaacc agcacggcta accgacagga cgccgtcctt ccatggcccg gtccaaggtg
      241 agctcgtcgg cgtattcgag gtcgctgccg atgggaagcc ccagaccgat gcgcgtggtg
      301 cgcacgccga tgggctcaag catgcgtgcc agccagctgg cggtagcctc gccgtccacc
      361 gtggggttgg tggccaggat gacttcctgg atggcgtgat cctccaggcg cttcagcagt
      421 tcccggatgc gcagctggtc cggtcccacg ccgcgcaggg gtgagatcag gccgcccagc
      481 acgtggtagc ggccgcggaa gtggccgctg cgctcgaagc tcaggacgtt ggaggcttcc
      541 gccacgatga cgaggctcgc ggggtcccgg cgcggatcga ggcagatggg gcaggtgggc
      601 tggtccgtga aggcgccgca gacctggcag aagcccacct tctcggcagc ctgctgcagc
      661 tggtgggcca ggtgcgccat ggcgtcgggt ccttctttca ggaggtgcag ggccatgcgc
      721 tgcgcggact tcgcacccac ccccggcagc ttctggaggc tctcgaccac ggcctcaagg
      781 ggcggcggca gcttcacggt ccggtctccc tcaactcgaa aacgcacacc gcggagacac
      841 ggagggcacg gagatggcac ggaggatggg gagcctgaac atgcctctcc gtggtttctc
      901 tcagtgttct cggtgcctcc gtggtgaatc tcacaggccg aggccgggca agttgaggcc
      961 ggcgccgagg ccgcccatct gcttcttcat ggactcgtcg accttggtgg ccgcgtcgcg
     1021 gaaggcggcc agcagcaggt cctcgagcat ggagggatcc tcgggatcca tggcgtcttt
     1081 ggcgatggag aggcccatca gctccttcga gccgttgagg gtgaccttca ccagctcgcc
     1141 gccggcggtg ccctccaccc gcaggttggc ctgggtttcg gccatcttcg cctgcatctg
     1201 ctgggcctgt ttcatcagga agcgcatgtc catggtcagt ctccggaaag gggggagggc
     1261 ttggggccgc gcagccggtg ggccaggcgc agcatcagga aatagcccac gggaacggcc
     1321 acggcgctca gcacgaagcc gcccagcagg tagggtacca ggatggggcg cagcatggtg
     1381 gccgcggctt cgaagccctc gcgggtggcg aagctgcgcc agccgatgct cttccagtcc
     1441 acgccgctca gattgagggc caggccccgg cccagcagca cgttgccgaa cagggccgag
     1501 gcggtggcga tgggcaccat ggtccagggg ttgttcgtga aggcccccag gaaggtcagg
     1561 gggcggtgca gcttcttcgc cagagcgcag acgaggagca cgagccccgt atgcgtgccc
     1621 agcagcgggt tccacgcgat gctgagcccg atggcgaagg accaggccag gtggtggggc
     1681 tccagggcgg ggtccgcgag gaagcgcttg gttcgggccc agaggtgcga tttgtcgcgg
     1741 tgcgtcatgg gcgtccgaag tggtcgaagc tgaggtcggg aagggggcgg agcaaacccc
     1801 catcataggc cagcagcggc gcttctccgc gcgccacggc ccggcccacg gcgatcaggg
     1861 ggagacccag gcgggcctcc aggtccgcct ggggcagggc ggcgccgaag caccgtgcgt
     1921 agtcctcgcc tccccgcagg gtgtcctcgt cgaggtccgg ttccacttcc acactgaggc
     1981 ccgaggcttc cgccaggttg cggagatccc ggctgaggcc atcggacaga tcgaggcagg
     2041 cgtggacctc ggggatggcg gcgaggcgca ggcccagccc cagccggggc ttcggcgcca
     2101 ggtgcgcctc caggtccgca tccggacgcc gcggatccca gcgctggccc gccgccagct
     2161 tgcgcaggcc gcgcaagctg gcgccgggct tctggtccac gtagatccgg tccccggg
//
LOCUS       DATGWW010000635         1689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_127404, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000635 DATGWW010000000
VERSION     DATGWW010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127404"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VK150_09295"
     CDS             complement(<1..262)
                     /locus_tag="VK150_09295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31545.1"
                     /translation="MTTVPTRAAALARLTVGLAAALGGAACGLGWTEGPWAAWGFGAA
                     CLLQTPSALNVIWRLREGLGNQGLERERLIHRGLGIVLRLLAL"
     gene            complement(259..>1689)
                     /gene="ettA"
                     /locus_tag="VK150_09300"
     CDS             complement(259..>1689)
                     /gene="ettA"
                     /locus_tag="VK150_09300"
                     /inference="COORDINATES: protein motif:HMM:NF008775.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HLP31546.1"
                     /translation="LDDSKTVIETIKEAVQPIVDMLARFDEVNAKFAEPDADFDALVA
                     EQSKLQEELDKHDAWNLDSHLEVAMEALRCPDPDTKVGVLSGGERRRVALCRLLLQEP
                     DILLLDEPTNHLDAETVAWLEKHLQDYKGTVIAVTHDRYFLDHVAEWILELDRGEGIP
                     WKGNYSSWLEQKQGRLAREEKSDQKRQKTLERELEWIRMSPKGQHAKSKDRIANYERL
                     AGEEGRQKEQELEIYIPSGPRLGDLVAELNGVSKAYGDKVLFENLSFAIPRAGILGII
                     GPNGAGKSTLLRLLTGQETPDAGTIRLGETVRMAYVDQLRSGLNPEKSVFEAVSGGYE
                     QIELGGKLINARAWLSRFGFSGDSQQKKISELSGGQQNRLNLALTLKSESNLLFFDEP
                     TNDLDVNTMRALEEAIESFAGSAVLVSHDRWFLDRLATHILAFEGDSQVQFFDGNYSQ
                     YEQYRKDVLGLKPFDPHRIKYRKLTR"
BASE COUNT          244 a          545 c          578 g          322 t
ORIGIN      
        1 ccagggccag gaggcgcagg acgatgccga gcccgcgatg gatcaggcgc tcccgctcca
       61 gcccctggtt gcccaggcct tcccggagtc tccagatgac gttcagggcc gagggtgtct
      121 gcagcaggca ggccgcgcca aacccccagg cggcccaggg gccttcggtc catcccagcc
      181 cgcaggcggc tccgcccagc gccgcggcga gacccaccgt gaggcgggcc agcgccgcgg
      241 cccgggtggg gaccgtggtc atcgagtgag cttccggtat ttgatgcggt gcggatcgaa
      301 gggtttcagg cccaggacat ccttgcggta ttgctcgtac tggctgtagt ttccgtcgaa
      361 gaactgcacc tgggagtcgc cctcgaaggc caggatgtgc gtggccagac ggtccaggaa
      421 ccagcggtcg tggctcacca ggacggcact gcccgcgaag gactcgatgg cttcttcgag
      481 ggctcgcatg gtgttgacgt cgaggtcgtt ggtgggttcg tcgaagaaca ggaggttcga
      541 ttcgctcttc agcgtgagcg ccaggttcag gcggttctgc tggccgccgc tgagctcgga
      601 gatcttcttc tgctgggagt cgccgctgaa gccgaaccgg ctgagccagg cccgggcatt
      661 gatgagcttg ccgcccagct cgatctgctc gtagccgccc gagaccgcct cgaagacgct
      721 cttctcggga ttgagcccag accgcaactg atccacgtag gccatgcgca ccgtctcgcc
      781 caggcggatg gtgccggcgt ccggcgtctc ctggcccgtg agcaggcgca gcagggtgga
      841 cttgccagcg ccgttgggtc cgatgatccc gaggatgccg gcgcggggga tggcgaagct
      901 gaggttctcg aagagcacct tgtcgccgta ggccttggag acgccgttca gctcagccac
      961 gaggtcgccc aggcgcgggc cgctggggat gtagatctcc agctcctgct ccttctggcg
     1021 gccctcctcg ccggccagcc gctcgtagtt ggcgatgcgg tccttgcttt tcgcgtgctg
     1081 gcccttgggc gacatgcgga tccactcgag ctcccgctcc agggtcttct ggcgcttctg
     1141 gtcggatttc tcctcccgcg ccaggcggcc ctgtttctgc tcgagccagc tggagtagtt
     1201 gcccttccag gggatgccct cgccgcggtc cagctcgagg atccactcgg ccacgtgatc
     1261 caggaagtag cggtcatggg tcacggcgat gaccgtgccc ttgtagtcct gcaggtgctt
     1321 ctccagccag gccacggtct cggcgtccag gtggttggtg ggctcgtcca gcagcaggat
     1381 gtcgggctcc tggagcagga gccggcacag ggccacgcgg cggcgctcgc cgccggagag
     1441 cacgccgacc ttcgtgtcgg gatcggggca gcgcagcgct tccatggcca cttccagatg
     1501 gctgtcgaga ttccaggcgt catgcttgtc gagttcctcc tgcagtttgg actgctcggc
     1561 aaccagcgcg tcaaaatctg catcgggttc ggcgaacttg gcgttgacct cgtcgaagcg
     1621 ggccagcatg tccacaatcg gctggacggc ctctttgatg gtctcgatca cggttttgga
     1681 gtcatccag
//
LOCUS       DATGWW010000636         1603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_394314, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000636 DATGWW010000000
VERSION     DATGWW010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_394314"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..838)
                     /locus_tag="VK150_09305"
     CDS             complement(131..838)
                     /locus_tag="VK150_09305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31547.1"
                     /translation="MLTDLRLQKYLRGLLSEEDAKEVEAWIEKNPEVKSRLEALKSHQ
                     AEGVGKPMWQRLHLGKKNRSGVRTRTTILLPLLLAIGIILMLSEHWFSRPGANSTFTM
                     TGGNGTALELLYNGAGGWRYMDASFREGDSLTFAVRDSNLYHVAVMAVFGRGAEAEVQ
                     TLWNSGGERRFGKQESKPVFPSSVKGRGRPRDIVVFYDSTPLPELPATRVLDILETKG
                     NERGGLDFQYQVFSSGL"
     gene            complement(851..>1603)
                     /gene="hemB"
                     /locus_tag="VK150_09310"
     CDS             complement(851..>1603)
                     /gene="hemB"
                     /locus_tag="VK150_09310"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF006762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HLP31548.1"
                     /translation="ALFPVIPDGLKDPLATESLSDGGLLQQTIRALKDSLPGLTVITD
                     VAMDPYSSDGHDGLVDGGAILNDETLPILAAMAVSQAEAGADIVAPSDMMDGRVGYLR
                     LALDAAGRQDTGILAYTAKYASSFYGPFREALDSAPKQGDKKTYQMDPANRREALVEA
                     DLDVREGADLVMVKPALAYLDVIAALKAAVDVPVAAYQVSGEYAMIHAAGRLGWLDAD
                     KAMLESLLSIRRAGADAILSYAALWAAERLNG"
BASE COUNT          276 a          486 c          547 g          294 t
ORIGIN      
        1 agcgggtttg gccatcggtt cgctttcctt caaatcgccg gggaggtact gcccaaagat
       61 gcagggggtc tgctacctgg caaactacca ttcctggtgt aacatgtcaa tttatcggaa
      121 tttccaattc tcagaggccg gaggaaaaga cctgatattg gaaatccaat ccgccgcgct
      181 cgttgccctt ggtctccagg atgtccagga cccgggtcgc gggaagctcg ggcaaagggg
      241 tgctgtcata aaatacaaca atgtccctcg gccttccccg ccccttgaca cttgaaggaa
      301 aaacgggttt cgactcttgc ttgccgaatc ggcgctcccc accactgttc caaagggtct
      361 ggacttcggc ctcggcgccg cggccgaaca cggccatcac cgccacgtgg tagaggttgc
      421 tgtcgcgcac cgcgaaggtg aggctgtcgc cttcccgaaa ggacgcgtcc atgtatcgcc
      481 agccgccggc accgttgtag agcagctcca gggcggttcc gttgccgccc gtcatggtga
      541 aggtggagtt cgcgccgggc ctggagaacc agtgttccga gagcatgagg atgatgccga
      601 tggccagcag cagggggagg aggatggtgg ttcgggtgcg gacgccgctc cggttcttct
      661 ttccgagatg gagccgctgc cacatgggct tgccgactcc ttcggcctga tgggacttca
      721 gcgcctcgag tcgcgacttc acttcagggt tcttctcgat ccacgcttcc acctccttcg
      781 cgtcctcctc ggaaaggagg ccccgaaggt acttctgtag gcggaggtcg gtgagcatcc
      841 ggggcggggc ctagccgttc aggcgttcgg cggcccacag ggcggcatag gacaggatgg
      901 catcggctcc agcgcgacgg atggacagga gggattccag catggccttg tcggcatcga
      961 gccagcccag ccggcccgcg gcgtggatca tggcatattc gccgctcacc tggtaggcgg
     1021 ccacggggac gtccacggcc gccttgaggg cggcgatcac atcgaggtag gcgagggccg
     1081 gcttgaccat aacaaggtcg gcgccctcgc gcacgtccaa atccgcttcc accagggctt
     1141 cgcggcgatt ggccgggtcc atctggtagg tcttcttgtc gccctgcttg ggcgcggagt
     1201 cgagggcctc ccggaagggg ccgtagaagg aggaggcgta cttggctgta taggcgagga
     1261 tgccggtgtc ctgacggccg gcggcatcga gggccaggcg caggtagccc acgcggccgt
     1321 ccatcatatc ggagggggcc acgatgtcgg cgccggcctc cgcctgggag acggccatgg
     1381 ccgcgaggat gggaagggtc tcgtcgttga ggatggcgcc cccgtccacc aggccgtcat
     1441 ggccgtcgct ggaataggga tccatggcca cgtcggtgat gaccgtcaga ccgggcaggg
     1501 aatccttcag cgcgcggatg gtctgctgca gcaacccgcc gtcggagagg gattccgtgg
     1561 ccaggggatc cttgagcccg tcgggaatca ccgggaacag cgc
//
LOCUS       DATGWW010000637         1532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_127727, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000637 DATGWW010000000
VERSION     DATGWW010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127727"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            70..>1532
                     /locus_tag="VK150_09315"
     CDS             70..>1532
                     /locus_tag="VK150_09315"
                     /inference="COORDINATES: protein motif:HMM:NF019935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /protein_id="HLP31549.1"
                     /translation="MLSFDPEAFRAALETTPQPLPLFRKALRTAREELKAAFLAGASV
                     DGLVTLRATLLDQLLTQAYRLHFPAGAQLALVAVGGYGRGELHPHSDIDVMLLAGNGT
                     AEELRESVERFVLFLWDMGLEIGHSVRTVDDCVREAGADITVATNLMESRLLDGNEPL
                     YTAMRAATGPDRVWPSRDFFAAKWQEQLARHRKFYDTAYNLEPNVKEGPGGLRDIQMI
                     GWVAKRHFGARTLEDLIAHRFLTRVEYERLMAGQEFLWKVRYGLHVLANRREDRLVFD
                     HQRALARIFGYQDDEAHPMVERFMKDYYRTVMELGQLNELLLQLFQEEILFADEPAEV
                     RPINARFQCRKGFVEVKQPNVFERYPFALLELFLLLAQHPELKGVRANTIRLVRHHTT
                     LIDDKFRRDLRCRSLFMEILRQPRGVLGALRQMNRFGLLGAYLPAFGKIVGQMQYDLF
                     HVYTVDQHTLFVVRNLRRLTVPEYAEEFPRSTHIMAS"
BASE COUNT          248 a          574 c          465 g          245 t
ORIGIN      
        1 gctggtgacc gccaacggcg ccgaggtcct gacccggcgc accggcgagg agatctgacg
       61 ctgactccgg tgctctcttt cgatccggaa gccttccggg cggcgctgga gaccaccccc
      121 cagcccctgc ccctcttccg caaggccctg cggaccgccc gtgaagagct gaaggccgcc
      181 tttctcgccg gggcctccgt ggacgggctg gtcaccctgc gggcaaccct gctcgaccag
      241 ctcctgaccc aggcctaccg cctccacttc cccgccgggg cacaactggc actggtggcg
      301 gtgggcggct acggccgggg cgagcttcac ccccactccg acatcgacgt gatgctgctg
      361 gcgggcaacg gcaccgcgga ggagctgcgc gagtcggtgg aaaggttcgt gctctttctc
      421 tgggacatgg gcctcgagat cggccacagc gtccgcaccg tggatgactg cgtccgcgag
      481 gcaggagcgg acatcaccgt cgccaccaat ctgatggagt cccgcctcct cgacggcaac
      541 gaacccctct acaccgccat gcgcgcggcc accggtcccg accgcgtctg gccgagccgc
      601 gatttcttcg ccgccaagtg gcaggagcaa ctggcccgcc accgcaagtt ctacgacacc
      661 gcctacaacc tggaacccaa cgtgaaggag ggccccggcg ggttgcgcga catccagatg
      721 atcggctggg tcgccaagcg ccacttcggc gcccgcaccc tggaggacct catcgcccac
      781 cggttcctca cccgcgtcga gtacgagcgg ctcatggcgg gccaggagtt cctgtggaag
      841 gtgcgctacg gcctgcacgt gctggccaac cgccgcgagg accgcctggt cttcgaccac
      901 cagcgcgccc tcgcccgcat cttcggttac caggacgacg aggcgcatcc catggtggag
      961 cgcttcatga aggactacta ccgcaccgtg atggagctgg gccagctcaa tgaactgctg
     1021 ctgcagctct tccaggagga gatcctcttc gccgacgagc ccgccgaggt gcgtcccatc
     1081 aacgcccgct tccagtgccg caagggcttc gtggaggtga agcagccgaa cgtcttcgag
     1141 cgctacccct tcgccctgct ggaactcttc ctgctgctgg cccagcaccc ggaactgaag
     1201 ggggtgcgcg ccaacaccat ccgcctggtg cgccaccaca ccaccctcat cgacgacaag
     1261 ttccgccgcg acctgcgttg ccgcagcctc ttcatggaga tcctgcgcca gccccgcggc
     1321 gtgctgggcg ccctgcgcca gatgaaccgc ttcggcctgc tcggcgccta tctcccggcc
     1381 ttcgggaaga tcgtcggcca gatgcaatac gacctgttcc acgtctacac cgtggatcag
     1441 cacaccctgt tcgtggtgcg caacctgcgc cgcctcacgg tgcccgagta cgcggaggag
     1501 tttccgcgca gcacccacat catggcctcc at
//
LOCUS       DATGWW010000638         1796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_128431, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000638 DATGWW010000000
VERSION     DATGWW010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128431"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..741
                     /locus_tag="VK150_09320"
     CDS             <1..741
                     /locus_tag="VK150_09320"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HLP31550.1"
                     /translation="QVDRKRVKVAGKVVKPGIEVRVAFDPDLPPVPTTPIPVVFEDAW
                     LLAVDKPAGLATQGTWATDRHDLLALLKTQRPDLKLFLHHRLDQGTSGLLVLAKDAKA
                     NPGLAAAFAGRDLEKLYLMRISEPLEACTVEAPIGRLRGADPGRFGCSGDLLDPKSAR
                     TDFRPATPEEREGLVPGHWLVARIHTGRTHQIRVHLAHLGRPILGDTLYGGQPSDRIW
                     LHAWRLVLKHPVTGEPLQLEAPPARFRS"
     gene            complement(764..>1796)
                     /locus_tag="VK150_09325"
     CDS             complement(764..>1796)
                     /locus_tag="VK150_09325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31551.1"
                     /translation="LVGKTPASTSAASATVGPVTPAPATGVNTVSGTVTFPGTATGLL
                     HVGLFNQDTQTPYVATYPVPTTLPAPTTRTLAYSLSGVPVGPSYFLFAILDQNGNGLV
                     DLGDFSNISAGDIARSSSNTTGLLNVSTDLPGQHLLLPGDNAIAYLGTSHQSYTVGST
                     TSETFGLQVDVRGNTKLPVNVALLVGSATLDLGRPATGGDFGGWFNHGAQRPFLGQIV
                     TAEVDYGEVPARDAINATVASVLDAFPSILAMTGTPAVPTFNWAAPDPAPVFPYSYRL
                     WIALKAGGTVWQYPSDRDMPSTQLSVPFNTDGLATPAALTPGLTYMWSISLRDASGNS
                     AEKKVDHTP"
BASE COUNT          266 a          596 c          670 g          264 t
ORIGIN      
        1 caagtggacc gcaagcgcgt gaaggtggcc ggcaaggtgg tgaagccggg catcgaggtg
       61 cgcgtggcct tcgatccgga tctgccgccg gtgcccacca cgcccattcc tgtggtgttc
      121 gaggatgcct ggctgctggc ggtggacaag cccgcgggcc tcgccaccca gggcacctgg
      181 gccacggacc gccacgacct gctggccctg ttgaagaccc agcggccgga cctgaagctc
      241 ttcctccacc accggctgga ccagggcacc tcgggcctgc tggtgctggc caaggacgcg
      301 aaggccaacc ccggcctggc ggcggccttc gcgggccgcg acctggagaa gctctacctc
      361 atgcggatct ccgagcccct ggaggcctgc accgtggagg cccccatcgg ccgcctgcgg
      421 ggcgccgatc ccggccgctt cggctgttcc ggcgacctcc tggatcccaa atccgcccgc
      481 acggatttcc gtccggccac gccggaggaa cgggaaggtc tggtgcccgg ccactggctc
      541 gtggcccgca tccacaccgg ccgcacccac cagatccgcg tgcacctcgc ccacctgggc
      601 cggcccatcc tgggcgacac cctctacggc gggcagccct ccgaccggat ctggctccac
      661 gcctggcgcc tggtgctgaa gcacccggtc accggcgagc cgctgcagct ggaggcgcca
      721 ccagcgcggt tccggtcctg aagaaccgcg ccggcgaacg ccctcagggg gtgtggtcca
      781 ccttcttctc ggcggagttc ccgctggcgt cccgcaggct gatgctccac atgtaggtga
      841 gccccggcgt cagcgcggcc ggggtggcca ggccgtccgt gttgaaaggc acggagagct
      901 gggtggaggg catgtcacgg tcggaggggt actgccacac cgtcccgccc gccttcaggg
      961 cgatccacag ccggtagctg taggggaaga cgggtgccgg atccggggcc gcccagttga
     1021 aggtgggcac cgctggcgtg ccggtcatgg cgaggatcga cgggaaggcg tccagcaccg
     1081 aggcgacggt cgcgttgatg gcgtcccggg cggggacctc gccgtagtcc acctccgccg
     1141 tcacgatctg gcccaggaag gggcgctgcg ccccatggtt gaaccagccg ccgaaatccc
     1201 cgcccgtggc gggtcggcct aagtcgagcg tcgcagatcc gacgaggagc gcgacgttga
     1261 cgggcagctt ggtgttgccg cgcacgtcca cctgcagccc gaaggtctcg gaggtggtac
     1321 tcccgacggt gtagctctgg tgcgaggtgc cgaggtaggc gatggcgttg tcgccgggaa
     1381 gcaagaggtg ctggcccggc aggtccgtcg agacgttcag gaggccggtg gtgttgctgc
     1441 tggaccgcgc gatgtcgccg gcggagatgt tgctgaaatc ccccaggtcg accaggccgt
     1501 tgccgttctg gtcaaggatg gcgaagagga aataggaagg gccgacaggc acccccgaca
     1561 gggagtaggc gagcgtacgg gtggtggggg cgggaagcgt ggttggaacg ggataggtcg
     1621 ccacataggg cgtctgcgtg tcctggttga agaggccgac atggaggagg ccagtcgcgg
     1681 tgccggggaa ggtcaccgtc cccgacacgg tgttgacccc tgtggccggc gccggcgtga
     1741 cggggccgac ggtggccgat gcggcgctgg tggaggccgg ggtcttcccg accagg
//
LOCUS       DATGWW010000639         3079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_209779, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000639 DATGWW010000000
VERSION     DATGWW010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3079
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_209779"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..718)
                     /locus_tag="VK150_09330"
     CDS             complement(<1..718)
                     /locus_tag="VK150_09330"
                     /inference="COORDINATES: protein motif:HMM:NF012731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HLP31552.1"
                     /translation="MNPNRIEPLEIEKEMRKSYLDYAMSVIVGRALPDVRDGLKPVHR
                     RVLFAMKEAGNDWNRAYKKSARTVGDVMGKYHPHGDSAIYDTLVRMAQPFSMRHVLVD
                     GQGNFGSIDGDSAAAMRYTEARLSRLANEMMGDIDQDTVDFGPNYDGSMEEPLALPAR
                     FPNLLVNGSQGIAVGMATSIPPHNLRECCHALINLIDQPSLALEGLMAHIKGPDFPGG
                     GIMLGTEGVLDAYRTGRGRCV"
     gene            complement(774..>3079)
                     /locus_tag="VK150_09335"
     CDS             complement(774..>3079)
                     /locus_tag="VK150_09335"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF011501.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HLP31553.1"
                     /translation="DNGRGIPVDIHKEEGRSAAEVIMTVLHAGGKFDNTSTEGKNAYK
                     VSGGLHGVGVSCVNALSSKLWLTVWKEGQEHAMTFSQGKADAPLKVVGPTARRGTRVR
                     FQPDPEVFNNVLDFSFETLSQRLRELSYLNQGVHIRITDERTGDTHDFMNAGGIGAFV
                     EHLNRNKVALHKPPIYIKDEKQDTTVEVALQWNDSYQETLYCFTNNIRNRDGGAHLEG
                     FRAAMTRVINTYAEKNNLLKSAKVSLSGEDVREGLTAVVSAKVPDPKFSSQTKDRLVS
                     SEVKGIVQTIVYEKLSSFFEENPREAKAILEKAIEAARAREAARKARELTRRKGALDG
                     GGLPGKLADCQEKDPALSEIFLVEGDSAGGSAKQGRHRATQAILPLKGKVLNVEKARF
                     DKILGHNELRVLIQALGTGIGKEEFKVENLRYHKIVLMTDADVDGSHIRTLLLTFFYR
                     QMPELVERGHLYIAQPPLYKVKKGKTEKYLKDERALEEFLFHKALDGWSLTLPDGSEH
                     KGATLVRELKKWGEVQQLYGKLDRRGYARPLVDALLAEGLLDAERFSVRGNLEALATA
                     ITQQRLGTCELETTETIERPAEGEDPAVVIPASHRLRVVRMHLSRPITLWIDEQVAHW
                     GEFRRLAALQAELAGFRGGELRLRRLKDIKESAREKDEEEGAEDGPTKLGKEQVFSDP
                     ETMLAMVMEEGKRGLGIQRYKGLGEMNPEQLWETTMDPERRTLLQVRVDDAVEADEIF
                     TILMGDAVEPRRRFIETNALLAENIDI"
BASE COUNT          442 a          992 c         1027 g          618 t
ORIGIN      
        1 ccacgcatcg gcccctgccc gtccggtaag cgtccagcac gccctcggtg cccagcatga
       61 tgccgccgcc cgggaaatcc gggcccttga tgtgggccat gaggccctca agggcgaggc
      121 tcggctggtc aatgaggttg atgagcgcgt ggcagcactc ccgcaggttg tggggcggaa
      181 tgctggtggc catgcccacg gcaatgccct gggagccgtt caccaggagg ttggggaacc
      241 gggcgggcag cgcgaggggc tcttccatgc tgccgtcgta gttgggcccg aaatccaccg
      301 tgtcctggtc gatgtcgccc atcatttcgt tggcgaggcg ggacaggcgg gcctcggtgt
      361 agcgcatggc cgccgcggaa tcgccgtcga tggaaccgaa gttgccctgg ccatcaacca
      421 gcacatggcg catcgagaag ggctgggcca tgcggacgag ggtgtcgtag atggccgagt
      481 cgccatgggg gtggtactta cccatcacgt cgccgacggt gcgggcagac ttcttgtagg
      541 cccggttcca gtcgttgcca gcttccttca tggcgaacag cacacggcgg tgcacgggct
      601 tgaggccatc gcggacatcg ggcagggccc ggcccacgat gacgctcatg gcgtagtcca
      661 ggtaggactt ccgcatctct ttttcgattt ccaggggctc aatgcgattc gggttcatgg
      721 ttcttccggt gttctacgtg gaacgctgct cgacatcctt gaaaaacaaa ggcttagatg
      781 tcgatgttct ccgccaggag ggcgttggtc tcgatgaagc ggcgccgggg ttccacggca
      841 tcacccatga ggatggtgaa gatctcgtcc gcttccacgg catcgtctac ccggacctgc
      901 aggagggtcc tgcgctccgg atccatcgtg gtctcccaca gctgctcggg gttcatctcg
      961 cccagcccct tgtaccgctg gatacccaga ccccgcttgc cctcttccat gaccatggcc
     1021 agcatggtct ccgggtccga gaagacctgc tccttgccga gcttggtcgg gccgtcctcg
     1081 gcgccttcct cctcgtcctt ctcccgggcg gactccttga tgtccttcag gcggcgaagc
     1141 cggagctccc ccccgcggaa gcccgccagt tcggcctgca gggccgccag gcgccggaac
     1201 tcgccccagt gggccacctg ctcgtcgatc cagagggtga tgggccgact caggtgcatg
     1261 cgcaccaccc ggaggcggtg gctggccgga atgaccacgg ccgggtcttc cccttcggcg
     1321 ggccgctcga tggtttccgt ggtttcaagc tcgcaggtgc cgagcctctg ctgggtgatg
     1381 gccgtggcca gggcctcaag gttcccccga acagagaacc gctcggcgtc cagcaggccc
     1441 tcggccagca gggcgtccac caggggccgg gcgtagccgc ggcggtcgag cttgccatag
     1501 agctgttgga cctcgcccca cttcttcagc tcgcggacca gggtggcgcc cttgtgctcg
     1561 cttccgtcgg ggagcgtgag gctccacccg tccagggctt tgtggaacag gaactcctcc
     1621 agggcccgct cgtccttcag gtacttctcc gtcttgccct tcttcacttt gtagaggggc
     1681 ggctgggcga tgtagaggtg gccccgctcc acgagctccg gcatctgccg gtagaagaag
     1741 gtgagcagca gggtgcggat gtgggatccg tccacgtcgg cgtcggtcat gagcacgatc
     1801 ttgtggtacc ggaggttctc gaccttgaac tcctccttgc cgatgcccgt gcccagggcc
     1861 tggatcagca cccgcagctc gttgtgcccc aggatcttgt cgaagcgggc cttctccacg
     1921 ttcagcacct tgcccttgag gggcaggatg gcctgggtgg cgcggtgacg gccctgcttg
     1981 gccgatccac cggcggaatc gccctccacc aggaagatct cgctgagggc aggatccttc
     2041 tcctggcagt ccgccagctt gccgggcaga ccacccccgt ccagggcgcc tttgcggcgg
     2101 gtcaactcac gggccttgcg ggcggcctca cgggcccggg cggcctcgat ggccttttcc
     2161 aggatggcct tggcctcccg ggggttctcc tcgaagaagc ttgagagctt ctcgtagacg
     2221 atggtctgga cgatgccctt gacctcgctg gaaaccaggc ggtccttggt ctggctggaa
     2281 aatttggggt cgggaacctt cgcgctcacg acggccgtca ggccttcgcg aacgtcctcg
     2341 cccgacaggc tcaccttggc gctcttcagc aggttgttct tctcggcgta ggtgttgatc
     2401 acgcgcgtca tggcggcccg gaagccctcc aggtgcgcgc cgccgtcccg gttccggatg
     2461 ttgttggtga agcagtacaa ggtctcctgg taggagtcgt tccactggag ggccacctcg
     2521 acggtggtgt cctgcttctc gtccttgatg tagatcggcg gcttgtggag ggccaccttg
     2581 ttgcggttca ggtgttccac gaaggcgccg atgccgccgg cgttcatgaa gtcatgggta
     2641 tcgccggtac gctcgtctgt gatgcggatg tggacgccct ggttcaggta gctcagctcg
     2701 cgcaggcgct ggctgagggt ctcgaagctg aagtcgagga cgttgttgaa cacctcggga
     2761 tccggctgga agcgcacgcg ggtgccgcgg cgggccgtgg ggcccaccac cttcaggggg
     2821 gcgtcggcct tgccctggga gaaggtcatg gcgtgctcct gcccttcctt ccagaccgtg
     2881 agccagagct tcgaggacag ggcgtttacg caggacacgc ccacgccgtg caagccgccg
     2941 gacaccttgt aggcattctt gccctcggtg ctggtgttgt cgaactttcc gccggcgtgg
     3001 agcaccgtca tgatcacttc cgcggcgctg cggccctctt ccttgtggat atccacggga
     3061 atgccgcggc cgttgtcct
//
LOCUS       DATGWW010000640         1575 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_128561, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000640 DATGWW010000000
VERSION     DATGWW010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128561"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..839)
                     /locus_tag="VK150_09340"
     CDS             complement(<1..839)
                     /locus_tag="VK150_09340"
                     /inference="COORDINATES: protein motif:HMM:TIGR01250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline iminopeptidase-family hydrolase"
                     /protein_id="HLP31554.1"
                     /translation="MRRARFLLLAVLLSSVVAPAQQAPRAQTSLKAYFADASEPREGG
                     VKLIPIQTPKGTFKVWTKRFGHNPRIKLLLLHGGPGSTHEYFESLEGFLPAEGIEFIY
                     YDQLGSAFSDQPKDRDLWVTERFVEEVEQVRKALGLNRENFYLLGHSWGGILAVEYAL
                     KYGANLKGLIISNMMMSIPDYNRYAHDVLAKGMDPAVVKEVKELEAKGQYENPRYMEL
                     LLPHFYAKHLCRLPVWPDAVNRATARSNNDIYVLMQGPSEFGASGRLERWDRKADLPK
                     LAMP"
     gene            complement(872..>1575)
                     /locus_tag="VK150_09345"
     CDS             complement(872..>1575)
                     /locus_tag="VK150_09345"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HLP31555.1"
                     /translation="DLFPVTYFTNHLAVTGPGEVLVQDHHLTRLDFELEVAVVTGRAL
                     KNATLEEADEAIFGYMVMNDWSARMLQMEEMKLSLGPCKGKDFATSLGPWLVTKDELN
                     LERTERGQILHAAMTCEVNRHRLSEGNADSMNWTFAQILQRTSYGIQMHAGEVIGSGT
                     VGTGCLLELNGSKVTDNLWLKAGDEVVMAIEGLGTLVNTVVHAPERLVDMPATLVGGI
                     LPDLYAGTPTGEAGD"
BASE COUNT          238 a          485 c          558 g          294 t
ORIGIN      
        1 ggcatggcca gctttggaag gtctgccttg cggtcccacc tctccaggcg gcccgaggcg
       61 ccgaactcgc tgggtccctg catgagcacg tagatgtcgt tgttggaccg ggccgtggcg
      121 cggttgacgg cgtcgggcca gaccggcagg cggcagaggt gcttggcgta gaagtgcggg
      181 aggagcagct ccatgtaccg ggggttctcg tactgtccct tggcctcgag ctccttcacc
      241 tccttcacca cggcgggatc catgcccttg gcgaggacgt cgtgcgcgta ccggttgtag
      301 tcgggaatgc tcatcatcat gttcgagatg atcagcccct tgaggttcgc gccgtatttc
      361 agcgcgtact ccacggcgag gatgcccccc caggaatggc ccaggaggta gaagttctcg
      421 cggttcagcc cgagggcctt ccgcacctgc tcgacctcct ccacgaagcg ctcggtcacc
      481 cacaggtcgc gatccttcgg ctggtcggaa aaggcggagc ccagctggtc gtagtagatg
      541 aactcgatgc cctcggcggg gaggaagcct tccagggact cgaagtactc gtgggtggag
      601 ccggggccgc cgtgcaacag cagcagcttg atgcgcgggt tgtgtccgaa gcgtttggtc
      661 cagaccttga aggtgccctt gggcgtctgg atggggatga gcttgacgcc gccctcccgg
      721 ggttccgagg cgtcggcgaa gtaggccttc agcgaggtct gggccctggg cgcctgctgc
      781 gccggagcca cgacggagct gagcagcacc gcgagaagga ggaagcgcgc gcgtcgcatg
      841 ggcagctccg ggaggggtga ggacagtcta gtcagtctcc cgcttcgccg gtgggcgttc
      901 cggcgtagag gtcgggcagg atcccgccca cgagggtcgc gggcatgtcc accaggcgct
      961 ccggcgcgtg gacgacggtg ttcaccaggg tgccgaggcc ctcgatggcc atgaccacct
     1021 cgtcgcctgc cttgagccag aggttgtcgg tgaccttcga gccgttcagc tccagcaggc
     1081 agcccgttcc cacggtgccg ctgccgatga cctcgcctgc gtgcatctgg atgccgtagc
     1141 tggtgcgctg gaggatctgc gcgaaggtcc agttcatgga atccgcgttg ccttcgctca
     1201 ggcgatggcg gttcacctcg caggtcatgg cggcgtggag gatctggccg cgctccgtgc
     1261 gctcgaggtt cagctcgtcc ttggtgacga gccagggacc caggctggtg gcgaagtcct
     1321 tgcccttgca ggggcccagg gagagcttca tctcctccat ctggagcatg cgggcactcc
     1381 agtcgttcat caccatgtag ccgaagatag cctcgtcagc ttcctccagg gtggcgttct
     1441 tgagggcccg gcccgtgacc acggccacct ccagttcgaa gtcgaggcgc gtgaggtggt
     1501 ggtcctgcac cagcacctcg ccggggccgg tcacggccag gtggttggtg aagtaggtga
     1561 ccgggaagag gtcga
//
LOCUS       DATGWW010000641         2658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_395059, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000641 DATGWW010000000
VERSION     DATGWW010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2658
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395059"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1412)
                     /locus_tag="VK150_09350"
     CDS             complement(<1..1412)
                     /locus_tag="VK150_09350"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HLP31556.1"
                     /translation="MTRLPAPLLASGLILLLACGGGGGGGATPPTQDAMALDKDANAT
                     PPADPAFFKVPRNALGAILSGGNVTFNYWNPSAGAVSLCLYANWNDALTAPAATVAMT
                     RGSGGIWSTGTISLPSQPFYVYKVGSSYVLDPYAKSMAQWVHANGATIFGDSIGKGAI
                     LSPGAHLPDGGWAYVGTANYFDGSRMKGPDGVAAAPYVYASSRDAIVYEAGIRDLTVD
                     PNLGSAFANGSTWGTYKGLVAMLPHIQKLGVTHVQLLCPLANYNYDQTKIRTRELDVT
                     KTSGANYNWGYDPQNYFTPSGMYSANPADPGARINELKTLINEIHKQGMGVILDVVYN
                     HTANNNVLGEAGIQGYYYRSTSRNGAGSQDVRSDAKMVRKLILDSIVHWVGEYKVDGF
                     RFDLMGVLDSQTVKAAYSAAAALNPNVLFLGEGWNGFYSGVATDYNGDATTGADQVDA
                     SQFSGLNIAMFSDSYRQIFK"
     gene            complement(1441..>2658)
                     /gene="glgP"
                     /locus_tag="VK150_09355"
     CDS             complement(1441..>2658)
                     /gene="glgP"
                     /locus_tag="VK150_09355"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HLP31557.1"
                     /translation="EMVLGIGGVRALQALRIKPDVYHFNEGHALFAGFELIHQRMAKG
                     ATFEAAWAKTRDEVVFTTHTPIVQGNESHPIDRFLYLGANLGLTKAQLKQLGGSPFNM
                     TVGALRLSRISNAVADLHRVTANRMWKKVEGRSEIIGITNAIHRPTWVDARMLDLAKA
                     CDGSKKAKEALWKAHVDNKKKLIQFVEGRTGVKLDADKLLIGFSRRAAPYKRSNFIFT
                     DRKFIEPLLKSGRVQIVFSGKAHPLDDNGKKIVENILEMTRKYPNSVVFLENYDMEIG
                     RMLTRGSDVWLNNPRRPKEASGTSGMKAAMNGVLNLSILDGWWPEACDHGVNGWQFGD
                     GFESEDEAVLDKHDFKAFKKVLADEVLPTYYDRHDAWVDMMVASIESTRDAFGVQRML
                     DEYYTRMYKRTAR"
BASE COUNT          423 a          792 c          921 g          522 t
ORIGIN      
        1 ttcttgaaga tctgccggta gctgtcggag aacatggcga tgttcaggcc gctgaactgg
       61 gacgcatcca cctggtcggc gccggtggtg gcgtcgccgt tgtagtccgt ggcgacgccg
      121 ctgtagaagc cgttccagcc ctcccccagg aagagcacgt ttgggttgag ggccgcggcg
      181 gcgctgtaag ccgccttcac cgtctggctg tccaggacac ccatgaggtc gaaacggaag
      241 ccgtccacct tgtactcgcc cacccagtgc acgatggaat cgaggataag cttgcgtacc
      301 atcttggcgt cggagcgcac atcctggctg cccgcgccgt tcctggacgt gctgcggtag
      361 tagtagccct ggatgccagc ctcgcccagc acgttgttgt tggccgtgtg gttgtagacc
      421 acgtcgagga tgacacccat gccctgcttg tggatctcgt tgatgagggt cttcagttcg
      481 ttgatgcgag cccctggatc cgccgggttg gcggagtaca tcccggaagg cgtgaagtag
      541 ttctgggggt cgtagcccca gttgtagttg gcgcctgagg tcttggtgac gtccagctcg
      601 cgggtgcgga tcttcgtctg gtcgtagttg tagttggcca ggggacagag cagctggacg
      661 tgggtgacgc ccaacttctg gatgtgaggc agcatggcca cgagaccctt gtaagtaccc
      721 caggtgctgc cgttcgcaaa ggcggagccc aggttgggat ccacggtcag gtcgcggatg
      781 cctgcctcgt agacgatggc atcgcggctg gaagcgtaga catagggtgc tgcagcaacg
      841 ccatccggtc ctttcatccg ggagccgtcg aagtagttcg ccgtcccgac gtaggcccag
      901 ccgccgtcag gcaggtgggc gcctggactg aggatggcgc ccttgccgat gctgtctccg
      961 aagatggtgg cgccattggc gtggacccac tgggccatgg atttcgcgta gggatccagc
     1021 acatagctgc tgccgacctt gtagacatag aagggctggc tgggcagaga gatcgttccc
     1081 gtggaccaga tccctccact gccgcgagtc atggccacgg tggcagccgg ggccgtgagg
     1141 gcatcattcc agttggcgta cagacagagg ctcaccgcgc cggcgctagg gttccagtag
     1201 ttgaaggtga cgttgccgcc gctgaggatc gcccccaggg catttctggg caccttgaag
     1261 aaggccggat cggccggggg cgtggcgttg gcgtccttgt ccagggccat cgcgtcctga
     1321 gtgggaggcg tggcgccgcc ccccccaccg ccgccacagg cgaggagcag gatcagccca
     1381 gaagccagga ggggagcggg caggcgggtc atgagacctc cagggcgaat cggcgcgggc
     1441 ctaacgggcg gtccgcttgt acatccgggt gtagtactca tcgagcatgc gctggacacc
     1501 gaaggcgtcg cgggtgctct cgatggaggc caccatcatg tcgacccagg cgtcgtggcg
     1561 gtcgtagtag gtgggcagca cttcgtcggc gagcaccttc ttgaaggcct tgaagtcgtg
     1621 cttgtccagc acggcctcgt cctcgctctc gaacccgtcg ccgaactgcc agccgttcac
     1681 gccgtggtcg caggcctcgg gccaccagcc atcgaggatg gagaggttca gcacgccgtt
     1741 catggcggcc ttcatgcccg aggtgcccga ggcctccttg ggtcggcgcg ggttgttcag
     1801 ccacacatcc gagccgcggg tgagcatgcg gccgatctcc atgtcgtagt tctcgaggaa
     1861 gaccacgctg ttggggtact tccgggtcat ctcgaggatg ttctccacga tcttcttgcc
     1921 gttgtcatcc agcgggtgag ccttgcccga gaagacgatc tggacgcggc cgctcttgag
     1981 caggggttcg atgaacttcc ggtcggtgaa gatgaagttc gaccgcttgt agggcgcggc
     2041 gcggcgggag aagccgatga gcagcttgtc cgcgtcgagt ttgacgccgg tgcgaccctc
     2101 cacgaactgg atgagcttct tcttgttgtc cacgtgcgcc ttccagagcg cttccttggc
     2161 cttcttcgag ccgtcgcagg ccttcgccag atccagcatg cgggcgtcca cccaggtggg
     2221 ccggtggatg gcgttggtga tcccgatgat ctcggagcgg ccttccacct tcttccacat
     2281 gcggttggcc gtcacccggt ggaggtccgc cacggcgttg gaaatccggg acaggcgcag
     2341 ggcacccacg gtcatgttga agggactgcc ccccagctgc ttgagttggg ccttggtcag
     2401 gcccaggttc gcgcccaggt agaggaagcg gtcgatgggg tgggactcgt tgccctgcac
     2461 gatgggggtg tgggtcgtga agaccacctc atcccgcgtc ttggcccagg cggcttcgaa
     2521 ggtggcgccc ttggccatgc gctggtggat cagctcgaag cccgcgaaga gggcgtgacc
     2581 ctcgttgaag tggtagacgt cgggcttgat gcgcagggcc tggagggccc gcacgccacc
     2641 gatgccgagc accatttc
//
LOCUS       DATGWW010000642         4274 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_128750, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000642 DATGWW010000000
VERSION     DATGWW010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4274
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128750"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..591
                     /gene="bioB"
                     /locus_tag="VK150_09360"
     CDS             <1..591
                     /gene="bioB"
                     /locus_tag="VK150_09360"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00433.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HLP31558.1"
                     /translation="GMEVCVTLGMLNEAQAKRLKEAGCQVYNHNIDSSRDFYETIIHT
                     RKFDERLETIAAVRAAGLEVCSGGIVGMGETVDQRIHFLQELTELEPAPESIPINQFV
                     AVDGTPLAGVPPLPPLELVRMIATARILFPKSRIRLSAGRTEMSDELQALCFFAGANS
                     IFTGEKLLTTPNPGGSHDHWLLGALGMRVEGAPARV"
     gene            594..1256
                     /locus_tag="VK150_09365"
     CDS             594..1256
                     /locus_tag="VK150_09365"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HLP31559.1"
                     /translation="MQLIEDLRAEHELIEQVVGSLRAFVTARLAGQGDPADGPRFMAF
                     FRRYAGDFHHDKEEAVLFAALAERAELPADRGPIAALTGEHRRMGGLLDEMEDRLGAP
                     LASEAEGLRLQSLAVDYSRSLWRHIDAENSVLFPEGQERLRRFHVRELPSRPMTPEEA
                     AAREAGLQLVARYAPQHDAEVHRGDGCIACPSYGTTCDGLEQEWWTDLEWEDMHDRMS
                     SD"
     gene            1421..3196
                     /locus_tag="VK150_09370"
     CDS             1421..3196
                     /locus_tag="VK150_09370"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HLP31560.1"
                     /translation="MRMITALYRLVERTFFHSLLRKILGCMLPIFAMLLVLSAYTLHL
                     ARTLSALAAKGALGSPEAQALLARAETLAFAIPALALVLGAGAFITFHLSVALPLRKI
                     ATTIQGGDFSRDISLETHDEIRGLAEGFNRFAGEIRNILDHSKRLGLSIAVGSTRTTK
                     LASDAASDAQHQGQLSERITRTSQEVAEAVGDVAQVTSRVAGSTLENLEAARATRIDL
                     AEAGTGMAATHDRLVDFAELVARLNERSERISDVVRLIEGVAGQTKLLALNASIEAAH
                     AGEAGKGFAVVADEVRKLSESVGEAAEEISHNLGGMLQDVARTSQGIQVLTADFQSTS
                     TTLDRASEHFVKLVGDFEENTAQLTVATSSVKGISDTSAAIHRQAEDIRGLSAVAEER
                     LQESTRFSTEMNRATEKLLELVSRFRTGTGELESVIHRATGWRDTLQARIQLLADRGV
                     NVFDRDYRPVPDTNPQKFLTSYALVFAKELQPLFDEARKDLGSTYAVALDVNGYLAIH
                     HAGVSEPMTGDPKVDLLKSRHQRIYFNVETEKRRSRNTEPFLFQTYMRDTGEILNDLS
                     LPIHIAGKHWGAIVTGFNPDRFLQG"
     gene            complement(3227..3979)
                     /locus_tag="VK150_09375"
     CDS             complement(3227..3979)
                     /locus_tag="VK150_09375"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HLP31561.1"
                     /translation="MAASFRPLTFACCASVVSLWAGAPLEGLILPIRQVEVSAPVSSR
                     LQDVKVKEGDAVKAGQPLAQLYGRLEELEMQRAKTLLERREFEAKGAKRLFENRIIPE
                     AKALESRIELDLARLQFEAAAEQVRLRTILAPMDGVVLAPVGDATASRAREAGEAVAA
                     AQPLFRILDLSRVVVQVAADPALLEGLAPGRKVRVTLLQATPPAEVEGEVVLVDPCAD
                     GQGRVRVRVVVENPGNRIRAGLRARVDLTAPR"
     gene            complement(3983..>4274)
                     /locus_tag="VK150_09380"
     CDS             complement(3983..>4274)
                     /locus_tag="VK150_09380"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLP31562.1"
                     /translation="HAQRHGLLPMAWSPLGGGRPAPPALESALADLGRAMDLEPAQVA
                     LAWLARHPAGVMPVLGTGRLDRVREAVSALDRRLDREAWFGLLEAATGHPVA"
BASE COUNT          655 a         1643 c         1411 g          565 t
ORIGIN      
        1 ggcatggagg tctgcgtcac cctcggcatg ctcaacgagg cccaggccaa gcgcctcaag
       61 gaggccggct gccaggtcta caaccacaac atcgattcca gccgcgactt ctacgagacc
      121 atcatccaca cccggaagtt cgacgagcgc ctggagacca ttgccgccgt gcgcgccgcc
      181 gggctcgagg tgtgctcggg cggcatcgtg ggcatgggcg agacggtgga ccagcgcatc
      241 cacttcctgc aggagctgac cgagctggaa cccgcacccg agagcatccc catcaaccag
      301 ttcgtggccg tggacggcac gccgctggcc ggcgtgccgc ccctgccccc cctggagctg
      361 gtgcgcatga tcgccacggc ccgcatcctc ttccccaaga gccgcatccg cctcagcgcc
      421 gggcgcaccg agatgagcga cgaactgcag gcgctctgct tcttcgcggg cgccaacagc
      481 atcttcaccg gcgagaagct cctcaccacc cccaaccccg gcggcagcca cgaccactgg
      541 ctgctcggcg ccctgggcat gcgggtggag ggcgccccgg cccgggtgta gccatgcagc
      601 tcatcgagga cctccgcgcc gaacacgagc tcatcgagca ggtggtgggc tcgctgcggg
      661 ccttcgtcac cgcccgcctc gcgggccagg gggatccggc ggacggccca cgcttcatgg
      721 ccttcttccg ccgctacgcc ggtgacttcc accacgacaa ggaggaggcc gtcctcttcg
      781 cggccctggc cgagcgggcc gagctgcccg cggaccgggg gcccatcgcc gccctgaccg
      841 gcgagcatcg ccgcatgggc ggcctgctcg acgagatgga ggaccgcctg ggcgcgccgc
      901 tggccagcga ggccgagggc ctccggctcc aatccctggc cgtggactac agccgctccc
      961 tctggcggca catcgacgcc gagaactccg tgctgttccc cgagggccag gagcgcctgc
     1021 ggcgcttcca cgtgcgggag ctgccctcgc ggcccatgac gcccgaggag gccgcggccc
     1081 gggaggccgg gctacagctc gtcgcccgct acgcgcccca gcacgacgcg gaagttcacc
     1141 gcggcgacgg atgcatcgcc tgcccctcgt acgggaccac ctgcgacggc ctggagcagg
     1201 agtggtggac cgacctcgag tgggaggaca tgcacgaccg catgtcgagt gactgacctc
     1261 acatccgggc cgaccgtccc cgtaccgggc tcatcctcga cggcccaccg cccgatccca
     1321 gggcatgggg ccggatcccg ggggcagcct cgcccgcttg aatggacccg ggcgggagag
     1381 gggcggacat gcgagggctg gccaggcgcg ggatgacccg atgcgaatga tcacggcgct
     1441 ctaccgcctc gtcgagcgga ccttcttcca ctccctcctg cgcaagatcc tgggctgcat
     1501 gctgcccatt ttcgccatgc tcctggtgct cagcgcctac accctgcatc tggcccgcac
     1561 cctctcggcc ctcgcagcga agggggccct gggttccccc gaggcccaag ccctcctggc
     1621 ccgggccgaa accctggcct tcgccatccc ggccctggcc ctggtcctcg gcgcgggcgc
     1681 cttcatcacc ttccacctct ccgtggccct gcccctccgc aagatcgcca cgaccatcca
     1741 gggcggggat ttctcccggg acatcagcct ggagacccat gacgagatcc gcggcctggc
     1801 cgaaggcttc aaccgcttcg ccggcgagat ccggaacatc ctcgatcact ccaagcgcct
     1861 cgggctctcc atcgcggtgg gctccacccg caccacgaag ctggcctcgg acgccgccag
     1921 cgacgcccag caccagggcc agctctccga gcggatcacc cgcacgagcc aggaggtcgc
     1981 cgaggcggtg ggcgacgtgg cccaggtgac cagccgcgtg gccggcagca ccctggagaa
     2041 cctcgaggcg gcgcgggcca cccggatcga tctggcggag gcgggcaccg gcatggccgc
     2101 cacccacgac cgcctggtgg atttcgcaga gctggtggcc cggctgaacg agcggtccga
     2161 gcgcatcagc gacgtggtgc ggctcatcga gggcgtcgcc gggcagacga agctcctggc
     2221 cctcaacgcc tccatcgagg ccgcccacgc cggcgaggcc ggcaagggct tcgccgtggt
     2281 ggccgacgag gtgcggaagc tctccgagag cgtgggcgag gccgccgaag agatctccca
     2341 taacctgggc ggcatgctgc aggacgtggc gcgcacctcc cagggcatcc aggtgctcac
     2401 ggcggatttc cagagcacct ccaccaccct ggaccgggcc tctgagcact tcgtcaagct
     2461 ggtgggcgac ttcgaggaga acaccgccca gctcaccgtg gcgacctctt ccgtgaaggg
     2521 catctccgac accagcgccg cgatccaccg gcaggccgag gacatccgcg gactcagcgc
     2581 cgtggcggaa gagcggctgc aggaatccac gcggttctcc acggagatga accgcgccac
     2641 cgagaagctg ctggagctcg tctcgcgctt ccggaccggc accggggagc tggagtcggt
     2701 gatccatcgc gccacgggct ggcgggacac cctgcaggcc cgcatccagc tgctggccga
     2761 ccggggcgtg aacgtcttcg accgcgacta ccggcccgtg cccgacacga acccccagaa
     2821 gttcctcacc tcgtacgccc tggtcttcgc gaaggaactc cagcccctct tcgacgaggc
     2881 gcgcaaggac ctcggctcca cctacgccgt ggccctggac gtcaacggct acctggccat
     2941 ccaccacgcg ggcgtctcgg agccgatgac gggcgacccc aaagtggatc tcctgaagag
     3001 ccgccaccag cgcatctact tcaacgtgga gaccgagaag cgccgctccc gcaacaccga
     3061 gcccttcctc ttccagacct acatgcggga caccggggag atcctcaacg acctctccct
     3121 gcccatccac attgcgggga agcactgggg cgccatcgtg acgggcttca acccggaccg
     3181 cttcctccag ggttgagggc cgtctccgga acgctccccg ggacgctcac cggggggccg
     3241 tcaggtccac ccgggccctg agtcccgcac ggatgcgatt cccggggttc tccaccacca
     3301 cccgcacgcg gaccctcccc tgcccgtcgg cgcagggatc gaccaggacc acctcgccct
     3361 ccacctccgc cgggggggtc gcctggagca gggtcacccg caccttccgc cccggcgcga
     3421 ggccctccag cagcgcgggg tccgcggcca cctgcaccac cacccggctc agatccagga
     3481 tgcggaacag gggctgggcg gcggcgaccg cctctccggc ctcccgggcg cgggacgcgg
     3541 tggcgtcgcc caccggcgcc agcaccaccc catccatggg cgccaggatg gtccgcagcc
     3601 gcacctgctc ggccgccgcc tcgaactgca ggcgggccag gtccagctcg atgcgcgatt
     3661 ccagggcctt cgcctcgggg atgatgcggt tctcgaagag ccgcttggcg cccttggcct
     3721 cgaattcccg gcgctccagc agggtcttgg cccgttgcat ctccagctcc tccagccgtc
     3781 cgtagagctg cgcgaggggc tgtcccgcct tcaccgcgtc gccctccttc accttcacgt
     3841 cctggaggcg gctggatacc ggggcgctga cctccacctg ccggatgggg aggatcaacc
     3901 cctccagcgg cgcgccggcc cagaggctga ccacggaggc gcagcaggcg aaagtgaggg
     3961 ggcggaagga agcggccatc ccctaggcta ccggatgccc ggtggcggcc tccagcaggc
     4021 cgaaccaggc ctcccggtcc aggcgccgat ccagggcgga gacggcctct cgcacccggt
     4081 ccaggcggcc cgtgcccagc accggcatca ccccggcggg gtgcctggcc agccaggcca
     4141 gggccacctg ggcaggctcg agatccatgg cccgccccag gtcggcgagg gcgctttcca
     4201 gcgcgggcgg cgccggccgg ccgccgccga ggggcgacca ggccatgggc agcaggccgt
     4261 ggcgctgggc gtgg
//
LOCUS       DATGWW010000643         3586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_161538, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000643 DATGWW010000000
VERSION     DATGWW010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3586
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161538"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..349
                     /locus_tag="VK150_09385"
     CDS             <1..349
                     /locus_tag="VK150_09385"
                     /inference="COORDINATES: protein motif:HMM:NF013962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HLP31563.1"
                     /translation="TLTLDGQGGSRVVSGTLFEGSPRIVGLRDYAMDFMPEPHMLLLS
                     YTDRPGMIGKIGTVLGQHDINIAFMNLGRREKKGEAMVVLSVDSPVPAPVLVELQKAT
                     EATFIQALHLPSA"
     gene            412..1062
                     /locus_tag="VK150_09390"
     CDS             412..1062
                     /locus_tag="VK150_09390"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HLP31564.1"
                     /translation="MKLIAWDFDGTLVDSRPLIEAGMAHALDALGQPRTVMAEWLKYV
                     GLPVEAGIQNTFGPLGLDGETVLKAYRSFGHADHEHMMQPFAGIPELLRELHGRGQRM
                     AVVTSKRRVPLLRQMAQWDWEPLFDIIITPDEVTHGKPHPESLEQLQSRTGLAAEDIL
                     MVGDTPFDLDMATAAGVPSLAVGHGFYPEAALAACGPRAYAPDTAALRDILLAWSV"
     gene            1178..1678
                     /gene="moaC"
                     /locus_tag="VK150_09395"
     CDS             1178..1678
                     /gene="moaC"
                     /locus_tag="VK150_09395"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: protein motif:HMM:NF006870.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HLP31565.1"
                     /translation="MSSLTHLDPEGRPVMVDVSAKAVTRRIAVAAGYLELDDPAAEAL
                     AHGGGPKGDPWSVARIGAVGGVKRTSDLIPLAHPLAIEAVDVSHHWDPATRRAWLRVQ
                     VSCEGRTGIEMEALAGVTVGLLVLYDMLKAVSHDMTLGPARLLRKEGGRRGVVRQPWP
                     GCPWEP"
     gene            1837..2901
                     /locus_tag="VK150_09400"
     CDS             1837..2901
                     /locus_tag="VK150_09400"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing M23
                     family metallopeptidase"
                     /protein_id="HLP31566.1"
                     /translation="MRLAVLTLVLASFSLGLQAAPKRASKKTSSRHAARPADGSVHVI
                     RKGETAASVARANGLSLAELAELNPGKSLSKLAVGARLNLRRPEEATRRAEAAKDPEA
                     PKSILGPVLAALPGSPTFPAAPMPHLERLLPYQVRSLPPGSGQVSAATLGTHQSPNTT
                     QQLLARMQPVMPPVTEAELKALLPTYAPADPERLDLLWPVETRTISSAWGPRMRTKTI
                     RVKNQRKKRVRYKGRHRGIDLTAPTGTSVFAALDGEVIMAGKHKQYGNYVVVEHGNGV
                     VTLYAHHKVNLVSPGDIVRRGQKIAEVGRTGNATGPHLHFELKVDGLQRNPLPVLNDE
                     EDIPAELAAQNALLGSTSHR"
     gene            3012..>3586
                     /locus_tag="VK150_09405"
     CDS             3012..>3586
                     /locus_tag="VK150_09405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31567.1"
                     /translation="MPLYRNALQHLGAIALLAVALACGGKSKGTTPAATTVIVGGTVN
                     YKRVPLAKDAQGVPTGLVDATVAANLQTLPARGMAVRIYQQVEQTQPDGTKVQIWKVA
                     KTTQTDVAGAFAVEVPKDLPTMVEVLSSFAAGNSQLINVVAEPSGIASPTQALDRLRY
                     ALRKAADGTAPAGVNTPSSLLTAQATLSFTVG"
BASE COUNT          568 a         1350 c         1145 g          523 t
ORIGIN      
        1 gaccctcacc ctggacggcc agggcggctc ccgggtggta tcgggcacgc tcttcgaggg
       61 cagcccccgc atcgtgggcc tgcgcgacta cgccatggac ttcatgcctg agccccacat
      121 gctgctgctg agctacaccg accgccccgg catgatcggg aagatcggca cggtgctggg
      181 ccagcacgac atcaacatcg ccttcatgaa cctgggccgc cgggagaaga agggcgaggc
      241 catggtggtg ctctccgtgg attcccccgt gcccgccccg gtgctggtcg agctccagaa
      301 ggcgacggag gccaccttca tccaggccct gcacctgccc tccgcctgag gccttctggg
      361 ggagccaagc ccggccacgc ggtctgccat catggaggcc gggaggcttc cttgaaactc
      421 atcgcctggg acttcgacgg cacgctggtg gacagccgcc ccctcatcga ggcgggcatg
      481 gcccacgccc tggacgccct gggccagccg cgcaccgtca tggcggagtg gctcaagtac
      541 gtgggcctgc cggtggaggc gggcatccag aataccttcg gccccctggg cctggatggc
      601 gagacggtgc tgaaggccta ccgcagcttc ggccacgccg accatgaaca catgatgcag
      661 cccttcgcgg gcatcccgga attgctccgc gagctccatg gccggggcca gcgcatggcg
      721 gtggtgacct ccaagcgtcg ggtacccctc ctccgccaga tggcccaatg ggactgggag
      781 ccgctcttcg acatcatcat cacccccgac gaggtcaccc acgggaagcc ccacccggag
      841 tcccttgagc agcttcagag ccgcacgggc ctggcggccg aagacatcct catggtggga
      901 gacaccccct ttgatctgga catggccacg gcggccggcg tgcccagcct ggccgtgggc
      961 catggctttt accccgaagc cgccctggcc gcctgcggtc cccgcgccta cgcgccggac
     1021 acggccgccc tgcgggacat cctcctcgcc tggagcgtgt gatgctgtcc ggaggggacc
     1081 gcctgctcac gtggttcgcg atgtcccccc cggaaccccc cacccaggtt tcaggccaag
     1141 cctgaaacct gaccccttcc acgactctgg agctgacatg tccagcctta cgcacttgga
     1201 ccccgaaggc cgccccgtca tggtggatgt ctccgccaag gccgtgaccc ggcgcatcgc
     1261 cgtggctgcg ggctacctgg agctggatga cccggcggcg gaggcgctgg cccatggggg
     1321 tggccccaag ggcgacccct ggtccgtggc ccggatcggg gccgtgggcg gcgtcaagcg
     1381 gacctcggac ctgattcccc tggcccaccc gctggccatt gaggcggtgg acgtgagcca
     1441 ccactgggac ccggccaccc gccgggcctg gctgcgggtg caggtgagct gcgagggccg
     1501 caccggcatc gagatggagg ccctggccgg ggtgaccgtg gggctcctgg tgctctacga
     1561 catgctcaaa gccgtgagcc acgacatgac cctgggcccc gcccgcctgc tccggaagga
     1621 gggcggccgg cggggggtcg tcaggcagcc ctggcccggc tgcccctggg agccctgatc
     1681 caggggcccc tagttggaaa acatttgcat gttcaaggat ccaggcgccc ggtaggatgg
     1741 atctggaccg ttcctattca tcgtgcaccc ggggtcgtga ccccctcatg gaggcctagc
     1801 gaagcaggct tttccgttcc agccgggagt ccccccatgc gtcttgccgt cctgaccctc
     1861 gtcctcgcgt ccttcagtct cggccttcag gccgccccca agcgagcctc caagaagacc
     1921 tcctcccggc acgccgcccg ccccgcggac ggctccgtgc atgtgatccg gaagggcgag
     1981 accgccgcat ccgtggcccg agccaacggc ctgagcctgg ccgagctggc cgaactcaat
     2041 cccggcaagt ccctctcgaa gctggccgtg ggcgcccgcc tgaacctccg ccgcccggag
     2101 gaggcgactc gccgtgccga ggccgccaag gatcccgagg cccccaagtc catcctgggg
     2161 cccgtcctgg ccgcgctgcc cggttctccc accttcccgg cggcgcccat gccgcacctg
     2221 gagcgcctgc tgccgtacca ggtccgctcg ctgccgcccg gaagcggcca ggtcagcgcc
     2281 gccaccctgg gcacccatca gtccccgaac accacccagc agctgctggc ccgcatgcag
     2341 ccggtgatgc caccggtcac cgaggccgag ctcaaggccc tcctgcccac ctacgccccc
     2401 gccgatcccg agcggcttga cctgctctgg cctgtggaga cgcggaccat cagctccgcc
     2461 tggggccccc gcatgcgcac caagaccatc cgcgtgaaga accagcggaa gaagcgtgtg
     2521 cgctacaagg gtcgccaccg gggcatcgac ctgaccgctc ccaccggcac ctccgtgttc
     2581 gccgccctgg acggcgaggt gatcatggcc gggaagcata agcagtacgg caactacgtg
     2641 gtggtcgaac acgggaacgg cgtcgtcacc ctctatgccc accacaaggt gaacctggtg
     2701 agcccgggtg acatcgttcg ccggggccag aagatcgccg aggtcggccg caccggcaac
     2761 gccacgggcc cgcacctcca cttcgagctc aaggtggatg gcctgcagcg caacccgctg
     2821 ccggtcctca acgacgaaga agacatcccg gctgagctgg ccgcccagaa cgcgctgctc
     2881 ggctccacct cccaccgctg aacctccggg cctcccgcgg cactggaagg gagcgtgcct
     2941 tcccgatccc cacgcgggat caagccggcg cgccgtgata gacttggtcc tttcgccgct
     3001 tcgaggtggt catgccgttg taccgaaacg ccctccagca cctgggggcc atcgcgcttc
     3061 tggccgtggc cctcgcctgc gggggcaaga gcaagggcac cacgccggcc gccaccaccg
     3121 tcatcgtcgg cggcaccgtg aattacaagc gggtgcccct cgcgaaggac gcccagggcg
     3181 tgcccaccgg cctcgtggac gccaccgtgg ccgccaacct gcagaccctt cccgcccggg
     3241 ggatggctgt gcgcatctac cagcaggtgg agcagaccca gccagacggc accaaggtgc
     3301 agatctggaa ggtggccaag accactcaga ccgacgtggc cggcgctttc gccgtggagg
     3361 tgcccaagga cctgcccacc atggtggagg tcctgagttc cttcgctgcc ggtaacagcc
     3421 aactcatcaa tgtggtggcc gaaccctctg gaatcgctag cccgacccag gctctcgacc
     3481 gacttcgata cgccctgcgc aaagccgcag acggcaccgc cccagccggg gtcaacacgc
     3541 ccagctcgct cctgaccgcc caggcgaccc tcagcttcac cgtggg
//
LOCUS       DATGWW010000644         2186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_161721, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000644 DATGWW010000000
VERSION     DATGWW010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161721"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            46..1755
                     /gene="asnB"
                     /locus_tag="VK150_09410"
     CDS             46..1755
                     /gene="asnB"
                     /locus_tag="VK150_09410"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:NF006949.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase B"
                     /protein_id="HLP31568.1"
                     /translation="MCGILAILNLDPKRSNLADLRRQALAMARKIRHRGPDWSGIFSD
                     DHAILVHERLSIVDVEHGAQPLIDTLQGTVLAVNGEIYNHQDLRRGLREAHDFQTLSD
                     CEVILYLYNELAPREFLNRMNGIFAFVLYDPKRETFLIARDPIGVVPLYVGWDRHEHL
                     YVASEMKALVGHCERIREVPPGHFFLGHEADKGFQRYYQPDWAEPGHVPREPYDPVRL
                     REALEAAVRRQLMCDVPYGVLISGGVDSSLVASIAAKYREGRVEEGGSAPAWWPRIHS
                     FAVGLAGAPDLAPAKKVAEHIGAIHHEIHFTVQEGLDALSDVVYHLETFDITTIRAST
                     PMYLLTRKIRAMGIKMVLSGEGADEIFGGYLYFHKAPDGPELHAETVRKLQKLHLYDC
                     ARANKASAAWGVEARVPFLDRDFLDVAMRLDPDVKLPRNAGRPRPIEKYPLRKAFEGA
                     IPDEVLWRQKEQFSDGVGYAWINALKATAERDISDAMLRGAGERFPVKTPESKEAYLY
                     RQLFEHHFPSATAVNCVPFERSVACSTETALRWDAAFATMNDPSGRAVVDVHEVGYKE
                     GAP"
     gene            1775..2032
                     /locus_tag="VK150_09415"
     CDS             1775..2032
                     /locus_tag="VK150_09415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31569.1"
                     /translation="MPDPQAGLARLMDHIKPGSTHRGLGEPDPGDAWEPPAFERYEDI
                     REWFKESVMSANLYERFPDGRWTIQLLLKEQNPGTYRYIVL"
BASE COUNT          370 a          799 c          686 g          331 t
ORIGIN      
        1 cccgattcgc gaaagcggat cggggttttc tctgttggag cttccatgtg cggcatcctc
       61 gccatcctca acctggaccc gaagcggtcc aacctggccg acttgcgccg gcaggccctg
      121 gccatggccc ggaagatccg ccaccggggc cccgactgga gcggcatctt cagcgacgac
      181 cacgccatcc tggtgcacga gcggctgtcc atcgtggatg tggagcacgg cgcccagccg
      241 ctgatcgaca ccctccaggg caccgtgctg gcggtgaacg gcgagatcta caaccaccag
      301 gacctgcgcc gcggcctgcg cgaggcccac gacttccaaa ccctctcgga ctgcgaggtc
      361 atcctctacc tctacaacga gctggcgccg agggaattcc tcaaccgcat gaacgggatc
      421 ttcgccttcg tcctctacga tcccaagcgg gagaccttcc tcatcgcccg ggatcccatc
      481 ggggtggttc ccctctacgt gggctgggac cggcacgagc acctctacgt ggcctcagag
      541 atgaaagccc tggtgggcca ctgcgaacgc atccgcgagg tgcctcccgg ccacttcttc
      601 ctgggccacg aagcggacaa gggcttccag cgctactacc agccggactg ggccgagccc
      661 ggccacgtgc cccgcgagcc ctacgaccct gtccggctcc gagaggcgct ggaggccgcc
      721 gtgcggcgcc agctcatgtg cgacgtgccc tacggcgtgc tgatctcggg cggcgtggat
      781 tcgtccctgg tggcctccat cgcagccaaa taccgcgagg gccgcgtgga ggaaggtggc
      841 tcggccccgg cctggtggcc gcgcatccac tccttcgccg tgggcctggc cggcgcgccg
      901 gatctggcgc cggccaaaaa ggtggccgag cacatcgggg ccatccacca cgagattcac
      961 ttcacggtgc aggagggcct cgacgccctg tccgatgtgg tctatcacct ggagaccttc
     1021 gacatcacca ccatccgggc ctcgacgccc atgtacctcc tcacgcggaa gatccgggcc
     1081 atggggatca agatggtgct gtcgggcgaa ggtgccgacg agatcttcgg cggctacctc
     1141 tacttccaca aggcacccga cggcccggaa ctgcacgcgg aaacggtgcg gaagctccag
     1201 aagctgcacc tctacgactg cgcccgagcc aacaaggcca gcgccgcctg gggcgtggaa
     1261 gcccgggtgc ccttcctgga ccgcgacttc ctggatgtgg ccatgcgcct ggatcccgac
     1321 gtgaagctgc cccggaacgc gggccgaccg cggcccatcg agaaataccc gttgcgcaag
     1381 gccttcgagg gcgccatccc cgacgaggtg ctgtggcgcc agaaggagca gttctccgat
     1441 ggtgtgggct acgcctggat caacgccctg aaggccaccg ccgagcggga catcagcgac
     1501 gccatgctgc ggggtgccgg cgagcggttc cccgtgaaga cccccgaaag caaggaggcc
     1561 tacctctacc gccagctctt cgagcaccac ttccccagcg ccaccgccgt gaactgcgtg
     1621 cccttcgagc gcagcgtggc ctgcagcacg gaaaccgccc tgcgttggga cgccgccttc
     1681 gcgacgatga acgacccttc gggccgcgcg gtggtggatg tccacgaggt ggggtacaag
     1741 gaaggagcgc cctgagggcg acgaaggact ccccatgccc gacccccaag ccggactcgc
     1801 ccgcctcatg gaccacatca agccgggctc cacccaccgg ggcctgggcg agcccgatcc
     1861 cggcgacgcc tgggagccgc ccgccttcga gcgctatgag gacatccggg agtggttcaa
     1921 agaatccgtc atgagcgcca acctctacga gcgctttccc gatggtcgct ggaccatcca
     1981 gctgctcttg aaggaacaga accccggcac ctaccgctac atcgtgctgt aggcgcgagg
     2041 cgctccccca tgaagccacc cctcccatcc accgccttcc aggcactcgc cctggcggcc
     2101 ctggccaccg cggcggcctt gctgtccaat gccgtggcgc cgccagcccg gcgactgccc
     2161 tgggttggcg ccatggcatc gctgcc
//
LOCUS       DATGWW010000645         2041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_129385, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000645 DATGWW010000000
VERSION     DATGWW010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129385"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..284)
                     /locus_tag="VK150_09420"
     CDS             complement(<1..284)
                     /locus_tag="VK150_09420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31570.1"
                     /translation="MTPSEAALGALRTFFAQPGVLDWGVAPARRNPHADALRAWVDAG
                     YHGSMEYMARRLAEREDPSVFHPWARSVVVFSIPYLAPLGTSPGPYKVAA"
     gene            complement(281..1567)
                     /locus_tag="VK150_09425"
     CDS             complement(281..1567)
                     /locus_tag="VK150_09425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31571.1"
                     /translation="MPWTHPRAVARILALPLALLACALPVRAERLLVPMDLSQTDHLK
                     AYGIAFLSLSGGRQVEWLLNYRGGSFLLEDSPILKREAAKRGVLFEVITDAAADRIHA
                     EIDGANMETIQLEKAPKIAVYTPLTKQPWDDAVTLALTYAEIPYAKIYDREIVEGKLK
                     EYDWLHLHHEDFTGQYSKFYASFRSASWYINQVAASEKLASDLGFPSNVMLKKAVVLA
                     IRDYVERGGFLFAMCLATSTLDMALACAKTDATDAIFDNTPVKPDFRKDMDYSLSLAF
                     TGFTVDPDPMSSTHGDIDYNQVNAGPLKRRPANDFVLFDFSPKYDPVPAMLVQNHTDL
                     VKGFFGLATSFSKPLVKKSVTVLGEVQGQPAVRYIHGGLGQGHFTYYGGHDPEDYSHA
                     VGDSPTDLSLHKNSPGYRLILNNILFPAARQKKRKT"
     gene            complement(1594..>2041)
                     /locus_tag="VK150_09430"
     CDS             complement(1594..>2041)
                     /locus_tag="VK150_09430"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HLP31572.1"
                     /translation="LVHCNAADREEARILHATETSVVHCPRSRAFFGHAMPPLDFYRE
                     EGVNLCLGTDSLASNEGLNLFDEMATFHEEHPEVPARDILAMATRNPAAALGLGNELG
                     VLRPGALADLIAIPLRHHPERDLHEEIVEETRDVVMVVVDGEEVVR"
BASE COUNT          344 a          563 c          776 g          358 t
ORIGIN      
        1 taggccgcca ctttgtacgg gccgggggag gtgccgaggg gcgcgaggta ggggatggag
       61 aagaccacca ccgagcgggc ccagggatgg aagacggacg ggtcttcccg ctccgcgaga
      121 cggcgggcca tgtactccat ggacccgtgg tagcccgcgt ccacccaggc gcgcagggcg
      181 tcggcatgcg gattccggcg ggccggggcc acgccccaat ccagcacgcc gggctgggcg
      241 aagaaggtcc gcagggcgcc gagggcggcc tcggaaggcg tcatgtcttg cgcttcttct
      301 gccgggccgc ggggaagagg atgttgttga ggatgaggcg gtagccgggg gagttcttgt
      361 ggaggctgag gtcggtggga gagtcgccga ccgcgtggct gtaatcctcc ggatcgtgtc
      421 cgccatagta ggtgaagtgg ccctggccga ggcctccatg gatgtagcgc accgcgggct
      481 gaccttggac ctcgcccagc acggtcaccg acttcttcac caggggcttg gagaaggagg
      541 tggcgaggcc gaagaagcct ttcaccaggt cggtgtggtt ctggacgagc atggcgggca
      601 cggggtcgta cttcggcgag aagtcgaaga ggacgaagtc gttggcgggg cggcgcttga
      661 ggggcccggc gttcacctga ttgtagtcga tatcgccatg ggtggaggac atgggatcgg
      721 ggtccaccgt gaagccggtg aaggcaagcg agagggaata atccatgtcc ttgcggaagt
      781 ccggcttgac cggggtgttg tcgaagatgg cgtcggtggc gtcggtcttg gcgcaggcga
      841 gggccatgtc caaggtggag gtggccaggc acatggcgaa gaggaaaccg cccctctcca
      901 cgtagtcccg gatggccagc accacggcct tcttgagcat cacgttgctg gggaagccga
      961 ggtcggaggc cagcttctcg gaggcggcca cctgattgat gtaccaggac gcggagcgga
     1021 aggaggcgta gaatttcgag tactgtccgg tgaaatcctc gtgatggagg tggagccagt
     1081 cgtactcctt gagtttgccc tccactattt cccggtcgta gatcttggcg taggggattt
     1141 cggcgtaggt gagggccaaa gtcacggcgt cgtcccaagg ctgtttggtg agcggggtgt
     1201 agaccgcgat cttgggggcc ttctccaact ggatggtctc catgttggcc ccgtctattt
     1261 cggcgtggat gcggtccgcc gcggcgtcgg ttatgacttc gaagagcacg ccgcgcttgg
     1321 cggcctcgcg tttgaggatg ggggagtcct ccaggagaaa gctcccaccc cggtagttga
     1381 gcagccattc cacctggcgg ccgccggaga gggagaggaa ggcgataccg taggccttga
     1441 ggtgatcggt ctgggacagg tccatgggga cgagcagccg ctcggcgcgg acgggaaggg
     1501 cgcaggccag gagcgcgagc gggagagcga ggatgcgcgc gaccgcgcgg gggtgagtcc
     1561 agggcatagc ctgaaaaata cctttgggag gcctcagcgg accacctctt cgccgtccac
     1621 caccaccatg accacgtccc gggtttcctc cacaatctct tcgtggaggt cgcgttcggg
     1681 atgatggcgt agggggatgg cgatgaggtc ggccagggct ccggggcgca ggacccccaa
     1741 ctcgttgccg agtcccagcg cggcggcggg attgcgggtg gccatggcga ggatgtcccg
     1801 ggcgggcact tcgggatgct cctcgtggaa ggtcgccatt tcgtcgaaca ggttgagtcc
     1861 ctcgttggag gccaggctgt ccgtgcccag gcacaagttc actccctcct cccggtagaa
     1921 gtcgagcggc ggcatggcgt ggccgaagaa ggcccgactg cgcgggcagt gtaccaccga
     1981 tgtttccgta gcgtgaagga tacgggcctc ttcccggtcg gcggcgttgc agtggaccag
     2041 c
//
LOCUS       DATGWW010000646         2638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_129543, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000646 DATGWW010000000
VERSION     DATGWW010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2638
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129543"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..395
                     /locus_tag="VK150_09435"
     CDS             <1..395
                     /locus_tag="VK150_09435"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HLP31573.1"
                     /translation="RRPKYMPPPSIEAFRDIEYRRARPAHLKLMEKGLSHHILWTACK
                     DSQTAADAFIQGSWHGAFTWHLCREARACGNHLSRAKVLAKVRADLSLAHFTQTPQLD
                     CEALTRHAVLKVVEVPPNLVPLPTEMPS"
     gene            complement(462..1877)
                     /gene="ahcY"
                     /locus_tag="VK150_09440"
     CDS             complement(462..1877)
                     /gene="ahcY"
                     /locus_tag="VK150_09440"
                     /inference="COORDINATES: protein motif:HMM:NF017071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HLP31574.1"
                     /translation="MTVATTDFIVADLALAAWGRKEIAIAEGEMPALMAIRKEYAATQ
                     PLKGARIAGSLHMTIQTAVLIETLKALGAEVRWASCNIFSTQDHAAAAIAAGGTPVFA
                     VKGETLPEYWDYTHRIFDFDGGANMILDDGGDATLLLHLGARAEQDIHVLDHPDSEEA
                     TVLFAAIRKRIAEKPGWYAAQLAKVQGVTEETTTGVHRLYEMAKKGELKFPAINVNDS
                     VTKSKFDNLYGCRESLVDAIKRATDVMVAGKIAVVCGYGDVGKGSAQALRALSAQVWV
                     TEIDPICALQSAMEGYRVVTMDEACDKADIFVTATGNFHVITHDHMIRMKHNAIVCNI
                     GHFDSEIDVAGIEKYQWEEIKPQVDHIIFPPSAKYPEGNRIILLAKGRLVNLGCGTGH
                     PSYVMSSSFANQTLAQIELWTKKADYPVGVYTLPKHLDEQVARLQLQTLNAKLTALRP
                     DQAKYIGVPLEGPYKADHYRY"
     regulatory      complement(1939..2025)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01057"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="S-adenosyl-L-homocysteine riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="S-adenosyl-L-homocysteine"
                     /db_xref="RFAM:RF01057"
     gene            2282..2590
                     /locus_tag="VK150_09445"
     CDS             2282..2590
                     /locus_tag="VK150_09445"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HLP31575.1"
                     /translation="MSNPLTPLALALALALPLSAAGQAPHAPQRPVNLNTATVTELMQ
                     LPRIGQKTAERIVGFRRQHGGFQRPEELMNVKGIGEKSFLKLKAQVTVGARSDRTTQQ
                     "
BASE COUNT          458 a          824 c          872 g          484 t
ORIGIN      
        1 accgccgccc caagtacatg ccgccgccct ccatcgaggc cttccgggac atcgagtacc
       61 gccgggcccg cccggcccac ctgaagctca tggagaaggg cctctcccac cacatcctct
      121 ggacggcctg caaggacagt cagaccgccg cggacgcctt catccagggc agctggcatg
      181 gtgccttcac ctggcacctc tgccgcgagg cgcgggcctg cggcaaccac ctgtcccgcg
      241 ccaaagtgct ggccaaagtc cgcgccgacc tcagcctggc ccacttcacc cagaccccgc
      301 agctggactg cgaagcgctc acccgccatg ccgtgctgaa ggtcgtggaa gtgcccccca
      361 acctggtgcc cctgcccacg gaaatgccga gctgagacgg gctcgaattg agtgaagaag
      421 ggcgcctttc ggcgcccttc tttacgtgaa ccgcgctcgt ctcagtagcg gtagtggtcg
      481 gccttgtagg ggccttcaag gggcacgccg atgtacttgg cctggtcggg gcgcagggcg
      541 gtgagcttgg cgttcagcgt ctgcagctgc aggcgggcca cctgctcgtc caggtgcttg
      601 ggcagggtgt agacgcccac ggggtagtcg gccttcttgg tccacagctc gatttgcgcc
      661 agggtctggt tggcgaacga ggaggacatg acgtagctgg ggtggccggt gccgcagccc
      721 aggttcacca ggcggccctt ggcgagcagg atgatgcggt tgccctcagg atatttggca
      781 gaggggggga agatgatgtg gtccacctgg ggcttgatct cctcccactg gtacttctcg
      841 atgcccgcga cgtcgatctc gctgtcgaag tggccgatgt tgcacacgat ggcgttgtgc
      901 ttcatgcgga tcatgtggtc gtgggtgatg acgtggaagt tgcccgtggc ggtgacgaag
      961 atgtcggcct tgtcacaggc ctcgtccatg gtcaccacgc ggtagccttc catggcggac
     1021 tgcagggcgc agatgggatc gatctcggtg acccacacct gggcgctcag cgcgcgcagg
     1081 gcctgggccg agcccttgcc cacgtcgccg taaccgcaga ccacggcgat cttgccggcg
     1141 accatcacgt cggtggcacg cttgatggcg tccaccaggg actcgcggca gccgtagagg
     1201 ttgtcgaact tgctcttggt gacgctgtcg ttgacattga tggcggggaa cttcagctcg
     1261 cccttcttgg ccatttcata cagccggtgc acgccggtgg tggtctcctc ggtcacgccc
     1321 tggactttgg ccagctgggc cgcgtaccag cccggcttct cggcgatgcg ctttcggatg
     1381 gcggcgaaga gcacggtggc ttcctcgctg tcgggatgat ccagcacgtg gatgtcctgc
     1441 tcggcgcggg cgcccaggtg cagcagcagg gtggcgtcgc cgccgtcatc gaggatcatg
     1501 ttcgcgccgc cgtcgaaatc gaagatgcgg tgcgtgtagt cccagtactc gggcagggtc
     1561 tcgcccttca cggcgaagac cggcgtgccg cccgcggcga tggcggcggc ggcgtgatcc
     1621 tgggtgctga agatgttgca actggcccag cgcacctcgg cgcccagcgc cttcagcgtc
     1681 tcgatgagca cggcggtctg gatggtcatg tgcagggagc cggcgatgcg cgcgcccttg
     1741 aggggctgcg tggcggcgta ctccttgcgg atggccatga gggcgggcat ctcgccctcg
     1801 gcgatggcga tctccttgcg gccccaggcg gcaagggcaa gatcggcgac gatgaagtcg
     1861 gtggtggcga cggtcatggg gacctcctcg aagggtcggg acggcgggtg ggatccacct
     1921 catcgcctcg attcagggtt gaggtgagcg ccgttcgaag gagatggccc gagcctgaga
     1981 tcccgcgcag acaacctgcc gggtcctgca gcgctcctcg gacctttcca gggtagcggt
     2041 gccgacaggc atccgggggc gaaaagcttg aacagagata actgtcatcg actacgaatt
     2101 cttcaattca aagtgactca attcaaaaga ataaataaaa cagcttgaat cgattatcta
     2161 aaaatatgtc attcaattac gacaaaattt atttttaata ttgattcaat ttgtttattt
     2221 acaacaattt acagattgga atggatctcg attggacatg ggtgcctgaa aggaggcaac
     2281 catgtccaac cccctcaccc ccctggccct ggcactcgcc ctggcccttc ccctctcggc
     2341 cgcgggccag gccccccacg ccccccagcg gccggtgaac ctcaacaccg ccaccgtcac
     2401 ggagctcatg cagctgcccc ggatcggcca gaagacggcc gagcgcatcg tcggtttccg
     2461 caggcagcac gggggcttcc agcggcccga ggagctgatg aacgtgaagg gcatcggcga
     2521 gaagagcttc ctgaagctga aggcgcaggt gaccgtgggc gccaggtcgg accgcacgac
     2581 ccagcagtag cccgggcggc ggcaacacac ggtgaggccg gtggcgacga ccatgcgg
//
LOCUS       DATGWW010000647         1673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_395761, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000647 DATGWW010000000
VERSION     DATGWW010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395761"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..1235
                     /gene="hydE"
                     /locus_tag="VK150_09450"
     CDS             123..1235
                     /gene="hydE"
                     /locus_tag="VK150_09450"
                     /inference="COORDINATES: protein motif:HMM:TIGR03956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[FeFe] hydrogenase H-cluster radical SAM
                     maturase HydE"
                     /protein_id="HLP31576.1"
                     /translation="MPARPETRPSFCLDHACVRAWLTERDPAVLEDLWAEADRVRQAH
                     VGDAVHLRGLIEVSSHCIRHCLYCGLRAPSEGLERYRMTADEILACAQEAVALGYGSV
                     VLQGGEDPGLTRDGVADVVRALKRDTPLAVTLSLGERDDEDLLAWRKAGADRYLLRFE
                     TSDPILYRRIHPNRSGVLSDRFAQLRRMRRMGYEIGSGVMVGIPGQTWDALADDILRF
                     RELDLDMIGIGPFLPSPRTPLGDSHADAFLAEPEDQVPNDELTTLKAVALTRLACPDA
                     NIPSTTALATLDRERGRELGLMRGANVVMPNVTPLRYRIHYEIYPGKACLNETAVACQ
                     GCLAGRIQALGRTVGTGPGGRNQTHCKDLTSCDFHH"
     gene            1362..>1673
                     /locus_tag="VK150_09455"
     CDS             1362..>1673
                     /locus_tag="VK150_09455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S) ferredoxin domain-containing protein"
                     /protein_id="HLP31577.1"
                     /translation="MPLPVRDHYQALSDRVGRTLADRDLGHRILIQVGSATCEHAAGS
                     QAVADEFARHIRASGRKDIVIHRTGCTGRCSREPIVGVQVAGQLPVKYDRVNRDLVHR
                     IF"
BASE COUNT          260 a          635 c          534 g          244 t
ORIGIN      
        1 cgcgggggtg cccatcacca actacgggtt ggccatcgcc cacaccctcg gcatcctgcc
       61 ccgcgccctg aggcccttcc ccgaggtcgc ggcgtcgcga cccacgccga tggagcccct
      121 ccatgccggc caggcctgag acccgtccca gcttctgcct cgaccacgcc tgcgtgcggg
      181 cctggctgac cgaacgggac cccgcggtcc ttgaggacct ctgggccgag gcggaccgcg
      241 tccggcaggc tcatgtgggc gatgcggtcc atctccgcgg cctcatcgag gtttccagcc
      301 actgcatccg ccactgcctc tactgcggcc tgcgggcccc gtcagagggc ctggagcgct
      361 accgcatgac ggccgacgag atcctcgcct gcgcccagga agccgtggcg ctgggctacg
      421 gcagcgtcgt gctgcagggc ggcgaggatc cggggctcac gcgggatggc gtggcggacg
      481 tggtgcgcgc cctcaagcgc gacacgcctc tggcggtgac cctttcgctg ggcgagcgcg
      541 acgacgagga cctcctggcc tggcggaagg cgggggcgga ccgctacctg ctgcgcttcg
      601 agaccagcga cccgatcctc taccggcgca tccacccgaa ccgctcgggg gtgctcagcg
      661 accgcttcgc gcagctccgg cgcatgcgcc gcatgggcta cgagatcggc tccggcgtga
      721 tggtgggcat ccccggccag acctgggacg cgctggccga tgacatcctg cgcttccgcg
      781 aactcgacct cgacatgatc gggatcggcc ccttcctgcc cagcccgcgc acccccctgg
      841 gcgacagcca tgcggacgcc ttccttgccg aaccggaaga ccaggtgccc aacgacgaac
      901 tcaccaccct gaaggccgtg gccctcacgc gcctcgcctg ccccgacgcg aacatcccca
      961 gcaccaccgc cctggccacg ctggaccggg agcggggccg cgagctcggg ctcatgcgcg
     1021 gcgcgaatgt cgtcatgccc aacgtgacgc ccctgcggta ccgcatccac tacgaaatct
     1081 atcccgggaa ggcctgcctg aacgaaacgg ccgtcgcctg ccaaggttgc ctcgcgggcc
     1141 gcatccaggc cctgggaaga acggtgggaa cgggcccagg tggccggaat caaacacact
     1201 gtaaagattt gacgtcctgt gatttccatc actgacctat agatcatcaa tgagcaaact
     1261 ccctgtgcag ccggtgccgg gcgcccgggg gctcacctct ccaggaccgc ccttcgcact
     1321 tctttgaatc cacccgggcc caccggttgg caggagatcc catgcctctc cccgtgcgcg
     1381 accactacca ggccctgtcg gaccgcgtcg gcaggaccct cgccgacagg gacctgggcc
     1441 acaggatcct catccaggtg ggatcggcca cctgcgagca cgccgcgggc tcccaggccg
     1501 tggccgacga gttcgcgcgg cacatccgcg cctcggggcg caaagacatc gtcatccatc
     1561 gcacgggttg caccggccgc tgctcgcgcg agcccatcgt cggggtccag gtggccggcc
     1621 agctgccggt gaaatacgac cgtgtgaacc gggacctggt ccaccgcatc ttc
//
LOCUS       DATGWW010000648         1811 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_130001, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000648 DATGWW010000000
VERSION     DATGWW010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130001"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..730
                     /locus_tag="VK150_09460"
     CDS             <1..730
                     /locus_tag="VK150_09460"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HLP31578.1"
                     /translation="GGSRGLGRACAVHLAREEAAHLTLLGRDAEALANAAAAVRRAGG
                     TVETHQAEVTDRARLSGIAKALAPLDGLVAAAGISGMTPVDGDSDAFFDEILAADLTG
                     PWNTVRAFLPRMGAGGRIVLVSSVLGRFGVPGYGAYCAAKHGVHGLAKALALELIDRG
                     IVVNAVAPGWVDTDMAQTGIRQIAAATGQSEAAFRAQAEAAVPVKRFFQPEEIAHGIA
                     WLLNPANTMQVGQCLNLDGGVLHI"
     gene            844..1401
                     /locus_tag="VK150_09465"
     CDS             844..1401
                     /locus_tag="VK150_09465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31579.1"
                     /translation="MRSLSELPTGHLEWLRDRIHPSVYRLDGGDEEVATLAFLDDQQI
                     LARVEAAEGTWTLKHLGVLTPAVTVRTEGAKTNLAVFHPHALRHGKLRFEDGPSFDWV
                     WLHDAGPGGAFLDADGLPLVRLRAHAGRDLNSVPGLERCEVDLGLRPTTRSRHALLAA
                     LGWYLILFDTLKERDALAAETALRL"
BASE COUNT          255 a          672 c          616 g          268 t
ORIGIN      
        1 cggtggttct cgcggcctgg gtcgggcctg cgcggtgcat ctggcccggg aggaagcggc
       61 ccacctcacc ctcctgggcc gggacgcgga agccctggcc aacgccgccg cggccgtgcg
      121 gagggccggc ggcacggtcg agacccacca ggccgaggtg accgaccgcg cgcggctgtc
      181 cggcatcgcc aaggccctgg cgcccctgga cggcctggtg gccgcggcgg gcatctcggg
      241 catgactccc gtggatggag attcggacgc attcttcgac gagatcctcg ccgcggacct
      301 caccgggccc tggaacaccg tgcgggcctt cctgccccga atgggggccg ggggccgcat
      361 cgtcctggtg tccagtgtcc tgggccggtt cggcgtcccg ggctatgggg cctactgcgc
      421 ggccaagcac ggagtgcatg gcctggccaa ggccctggcc ctggagctca tcgaccgcgg
      481 catcgtggtc aacgccgtgg ccccgggctg ggtggacacc gacatggccc agaccggcat
      541 ccggcagatc gccgccgcca ccgggcagtc cgaagccgcc ttccgggccc aggccgaggc
      601 ggccgtgccg gtgaagcggt tcttccaacc cgaggagatc gcccacggca tcgcctggct
      661 gctgaacccc gccaacacca tgcaagtggg ccagtgcctc aacctggatg gtggcgtcct
      721 gcacatttga accgcccggc ccgctggccg gaaactttcg accgccaacg ctgacacggc
      781 cggcccggag gacgtacatt ccccctgcgc ggatgcatcc ccgcgggaaa tgaggggcat
      841 gccatgagat cgctctctga acttcccacc ggccacctgg agtggctccg ggaccggatc
      901 cacccctcgg tctaccgcct ggacggcggg gacgaggagg tcgccaccct ggccttcctg
      961 gacgaccagc agatcctcgc ccgggtcgag gccgccgagg ggacctggac cctcaagcac
     1021 cttggcgtgc tgacaccggc ggtgacggtg cgcacggagg gggccaagac caacctcgcc
     1081 gtcttccacc cccacgccct ccgccatggg aagctgcggt tcgaggatgg cccctccttc
     1141 gactgggtct ggctgcatga cgccggcccc ggcggggcct tcctggacgc ggacggtctt
     1201 ccgctcgtgc gcctccgggc ccacgcgggc agggacctca actccgtgcc cggccttgag
     1261 cgctgcgagg tggacctggg gctgagaccc accacccgct cccgccatgc cctgctggcg
     1321 gccctgggct ggtacctgat cctcttcgac acgctgaagg agcgggacgc cctggccgcg
     1381 gaaaccgccc tgcggctctg aggcgcacgc ttcagcccca ggttttgatc agcaggtcca
     1441 ttctgacgcc gaaccccgac gggctgcgtt gggggtgagt tgggaccacc tgccggccag
     1501 gcactcgggg tggttctggg acgccctgac ggggctggct gaggcattcc atccaaccat
     1561 ccccacctcc caggaggccg gcgttgaccc gcccccaacg ccgggcgtac ggtggcaccg
     1621 caccccatct cggacaggag gcgccatgct ccacctcatc tggacctgca tcatcggcct
     1681 catcgccggc accgcggcca agctgctcct gcccggcaag gatccgggcg gatggatcat
     1741 caccatgatc ctcggtgtcg ccgggtcctt cctgggcacc tggctcggtc ggatggtggg
     1801 ccactaccag g
//
LOCUS       DATGWW010000649         3060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_130423, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000649 DATGWW010000000
VERSION     DATGWW010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3060
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130423"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..406)
                     /locus_tag="VK150_09470"
     CDS             complement(<1..406)
                     /locus_tag="VK150_09470"
                     /inference="COORDINATES: protein motif:HMM:NF024586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HLP31580.1"
                     /translation="MNPHALAWLALALPIGTALGGLVVLLFRWARLRRRTAADPEALL
                     LTAVSGSLRERGELAASLGELRTVHERLVDALPTGLLWVDQRQRLAALNRRGQELLGV
                     KPGVVGLEAAFVLEPFPWLREALAHEPGPARSL"
     gene            516..1343
                     /locus_tag="VK150_09475"
     CDS             516..1343
                     /locus_tag="VK150_09475"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: protein motif:HMM:NF003742.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HLP31581.1"
                     /translation="MERQPIYIVSGGSGETAHRMVQAALTQFAKGESSALVRRFQNVR
                     SREDLDRVLHMAADKRAVIIHTTVSREMRDYLADRCAELRLTQVDLFGNLLDTLALYL
                     RERPEERAGSFHAVGDKYFRRIEAIEFALKFDDGIDMGGLTDADIVLVGISRTSKTPL
                     SMYLAMEGYKVMNVPLVPGVPLPPELDAIPQGRIVGLTIEADRLQEIRAYRLKRLGAA
                     GSADSYSDMGRILDELAYADEVFKQHRRWPVLDVTGRSIEETAGLVLDRVFGKERAV"
     gene            complement(1359..2831)
                     /gene="pap"
                     /locus_tag="VK150_09480"
     CDS             complement(1359..2831)
                     /gene="pap"
                     /locus_tag="VK150_09480"
                     /inference="COORDINATES: protein motif:HMM:TIGR03708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0043751 - polyphosphate:AMP
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006797 - polyphosphate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate:AMP phosphotransferase"
                     /protein_id="HLP31582.1"
                     /translation="MFESAELGHKVSKETWDQEVPALREALLDAQYDLAGAKFPVIIL
                     VAGVDGSGKSETVNTLNEWMDPRHIQTHGLDEPTDEERERPHMWRHWRMLPPKGKIGI
                     FDGSWYTWPILERAYGRIKTSDLDQDMARVARFEQMLIHEGALVLKFWMHLGKDAQKK
                     RLKSLEKDPKTRWRVTPRDWRHFEMYDTFRQVAERALRSTSTADSPWIVVEATDPRYQ
                     RLSVGKILLERIRTRLDQPAPKAAPVAPRISAKLDEVNILKALDLTKRLDKKDYEEEL
                     LLLQGKLNLLTRHKNFQKHSVVLVFEGVDAAGKGGGIRRITGALDARTYRIQPVAAPT
                     EEERAQPYLWRFWRNLPGRGKVMIFDRSWYGRVLVERVEGFCAEADWQRAYSEINDFE
                     DQLARSRSILLKFWLSISQEEQLRRFEERQATPFKRFKITEEDWRNREKWPAYEAAIC
                     DMLERTSTEIAPWTLVESEDKRYGRIKILKTLVQRLEDEL"
BASE COUNT          466 a         1067 c         1012 g          515 t
ORIGIN      
        1 ccaggctccg ggcgggaccc ggctcgtgcg ccagggcctc ccgcagccag ggaaagggtt
       61 ccagcacgaa ggccgcctcc agccccacca cgccgggctt cacacccagc agctcctggc
      121 cccggcggtt caacgccgcc agccgctggc gctggtccac ccagagcagg ccggtcggaa
      181 gcgcgtccac cagccgttcg tggaccgtgc gcagctcgcc cagggaggcg gccagttcgc
      241 cgcgctcccg caggctgccg gagacggccg taagcagcag ggcttcagga tccgccgccg
      301 tccgccggcg caaccgggcc cagcggaaca ggagcaccac cagccccccg agcgccgtgc
      361 cgatgggcag ggccagggcc agccaggcga gggcgtgggg attcacgcgg cacccccggg
      421 atcaggcagg acgggtccgg ccccgggcac cggcccaggc cagggggcac gccactgctg
      481 ctctgcgctc atgcccccag ggtatgctga aacccatgga gagacagccc atctacatcg
      541 tgtccggcgg gtccggcgag accgcgcacc gcatggtgca ggcggccctc acccagttcg
      601 ccaagggcga gagctcggcc ctggtgcgcc gcttccagaa tgtgcgctcc cgggaagacc
      661 tcgaccgcgt gctgcacatg gccgcggaca agcgtgccgt catcatccac accaccgtgt
      721 cgcgggagat gcgcgactac ctggccgacc gctgcgcgga gctgcgcctc acccaggtgg
      781 acctcttcgg caacctgctg gacaccctgg ccctctacct gcgggagcgg cccgaggagc
      841 gcgcgggcag cttccacgcc gtgggcgaca agtacttccg acggatcgag gcgatcgagt
      901 tcgccctgaa attcgacgac ggcatcgaca tgggcggcct gacggacgcc gacatcgtgc
      961 tcgtgggcat cagccgcacg agcaagacgc ctctatcgat gtatctcgcc atggaaggct
     1021 acaaggtgat gaacgtaccc ctggtgcctg gggtgcccct gccgccggag ctggacgcca
     1081 ttccccaggg ccgcatcgtg ggcctgacca tcgaggccga ccggctgcag gagatccggg
     1141 cctaccgcct gaagcggttg ggcgccgcgg gcagcgccga cagttacagc gacatgggcc
     1201 gcatcctcga cgagctggcc tacgctgacg aggtcttcaa gcagcaccgg cgctggcccg
     1261 tgctggacgt gacgggacgc agcatcgagg agaccgccgg cctggtgctg gaccgcgtgt
     1321 tcggcaagga acgagcggtc tagggccgga gttcccccct acaactcatc ctccagccgc
     1381 tgcaccagcg tcttcaggat cttgatgcgc ccgtagcgct tgtcctcgct ctcgacgagg
     1441 gtccaagggg cgatctcggt gctggtgcgc tcgagcatgt cgcagatggc ggcctcgtag
     1501 gcgggccact tctcgcggtt gcgccagtcc tcctcggtga tcttgaagcg cttgaagggc
     1561 gtcgcctggc gttcctcgaa gcggcgcaac tgttcttcct ggctgatgga gagccagaat
     1621 ttcaacagga tgctgcggct gcgcgccagc tgatcctcga agtcgttgat ctcgctgtag
     1681 gcccgctgcc agtcggcctc cgcgcagaag ccctccacgc gctccaccag cacccggccg
     1741 taccagctgc ggtcgaaaat catcaccttg ccccgccccg gcaggttccg ccagaaacgc
     1801 cagaggtagg gttgcgcccg ctcctcctct gtgggggcag ccacgggctg gatgcggtag
     1861 gtgcgggcgt ccagcgcgcc ggtgatgcgc cggatgccgc cccccttccc ggccgcgtcc
     1921 acgccttcga agaccagcac gaccgaatgc ttctggaaat tcttgtggcg ggtgaggagg
     1981 ttcagcttgc cctggaggag cagcagctct tcctcatagt ccttcttgtc caggcgtttc
     2041 gtgagatcca gcgccttgag gatgttcacc tcgtcgagct tcgccgagat ccggggcgcc
     2101 accggcgcgg ccttcggggc cggctgatcc aggcgggtcc ggatccgctc caggaggatt
     2161 ttccccacgc tgagccgctg gtagcggggg tcggtggcct ccaccacgat ccagggcgaa
     2221 tccgccgtgc tggtggagcg cagggcccgc tcggccactt ggcggaaggt gtcgtacatc
     2281 tcgaagtgcc gccagtcccg gggcgtcacc cgccatcgag tcttcgggtc cttctcgagg
     2341 ctcttcaagc gcttcttctg ggcgtccttg ccgaggtgca tccagaactt cagcaccagc
     2401 gccccttcgt ggatgagcat ctgctcgaag cgcgcgaccc gcgccatgtc ctggtccagg
     2461 tccgaggtct tgatccggcc gtaggcccgc tcgaggatgg gccaggtgta ccaggacccg
     2521 tcgaagatcc cgatcttgcc cttgggcggc agcatgcgcc aatggcgcca catgtgggga
     2581 cgttcccgtt cctcgtccgt gggttcgtcc aggccgtggg tctggatgtg gcggggatcc
     2641 atccactcgt tcagggtgtt cacggtctcg ctcttgcccg agccgtccac gcccgccacg
     2701 aggatgatca cggggaattt ggccccggcc aggtcgtact gcgcgtccag cagcgcctcc
     2761 cggagcgccg gaacctcctg atcccaggtt tccttcgaga ctttgtgccc gagctccgcg
     2821 gattcgaaca tggttcctcc gggatggatg cgcctctatt tcggccaacg gatggcgaag
     2881 gctgatttcc agtgggccgg tgaggtggaa tgatgatgac atgatctcca tcactgactc
     2941 catccagccg gccctggacc acacctggcg catcctcttc cggcccttct cctggcggaa
     3001 gtggttcgtg ctgggcttcg cggccttcct ggcccagctg ggcgagggcg gcgccttcaa
//
LOCUS       DATGWW010000650         7272 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_396402, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000650 DATGWW010000000
VERSION     DATGWW010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 7272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7272
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396402"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(210..1679)
                     /locus_tag="VK150_09485"
     CDS             complement(210..1679)
                     /locus_tag="VK150_09485"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HLP31583.1"
                     /translation="MARDFQTFLKQLEAAGELARVAPPVDPNLEMGAIADRVSKQPGG
                     GKALLFEQPAGKTMPVAMNAFGSLKRMEMALGVDREPRGLDAIADRIEKLVQEAMPKP
                     GTGFFEKLAKLPVLAEVGNWMPKTVRKGICQEVVLKGDQVKLTDLPVLTTWPEDGGPF
                     ITLGMSHTRNKQTGHRNVGLYRLQVYDDRTLGFHTQLHHDGARNRHGYAKDERMPVAV
                     SFGGDPALTYAATAPLPPFLSEVMFAGFLRGEGIEMVPCVTNDLEVPADSELVIEGYV
                     NPGELRREGPFGDHTGYYSLADDYPVLHVEAITLRKNPVFPATIVGRPPQEDAYLGLA
                     TERIFLPLLRMVLPEIRDMHLPAAGAFHNLVILSMKKEYPGHAQKVMNAIWGTGQIMF
                     TKGIVVVDEDIDPHDLNEVLFRLTSNVDPKRDMLFTEGPLDVLDHAADRFAFGSKVGI
                     DATRKNRPWDGYAREWPRDLVFPGEILDRVNRRWKEYGI"
     gene            1865..2176
                     /gene="rplU"
                     /locus_tag="VK150_09490"
     CDS             1865..2176
                     /gene="rplU"
                     /locus_tag="VK150_09490"
                     /inference="COORDINATES: protein motif:HMM:NF013025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HLP31584.1"
                     /translation="MFAIIKTGGKQYRVAEGDILRVETLEKDPKQAVTFDQVLLIDNN
                     GDLKVGKPTVQGATVEAEVITHDRAKKVIIFKKKRTTTYQRTQGHRQNYTEVRIKAIK
                     G"
     gene            2301..2561
                     /gene="rpmA"
                     /locus_tag="VK150_09495"
     CDS             2301..2561
                     /gene="rpmA"
                     /locus_tag="VK150_09495"
                     /inference="COORDINATES: protein motif:HMM:NF013203.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HLP31585.1"
                     /translation="MAHKKGVGSSRNGRDSHSQRLGVKEFGGEVVPGGSILVRQRGTK
                     FKAGINVGMGKDHTLFALIDGKVRFQDKGQSGRFIHIDPIEG"
     gene            2715..3806
                     /gene="obgE"
                     /locus_tag="VK150_09500"
     CDS             2715..3806
                     /gene="obgE"
                     /locus_tag="VK150_09500"
                     /inference="COORDINATES: protein motif:HMM:NF008955.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HLP31586.1"
                     /translation="MFLDHVQLRVTAGHGGSGAMSFRREKFAPEGGPDGGDGGKGGSV
                     FLRANRALNTLNPYRNKREFAAERGRQGEGCMRHGKDGLDVLLEVPLGTVVKDGETGE
                     VLAELLAHGEDVCVARGGRGGLGNTNFKSATNRTPRHHQPGEDGEARTLDLELKLIAD
                     VGLVGFPNAGKSTLVSRLSAARPKIADYPFTTLEPQLGVVSLDRFGGDLLDSWVIADI
                     PGLIEGAASGAGLGIQFLRHVERTRMLLQLVDLSDPVMEPEEAIRVIEGEVQAFSPVL
                     AAKPRWLVGTKLDALQDESRREAFEAICLQRGQKPIFISGVTGEGLRDLAFAVDAALK
                     GGPGFALEPRNDWEEAPRSERAATTGEAR"
     gene            3806..4420
                     /locus_tag="VK150_09505"
     CDS             3806..4420
                     /locus_tag="VK150_09505"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: protein motif:HMM:NF013621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004515 - nicotinate-nucleotide
                     adenylyltransferase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HLP31587.1"
                     /translation="MRVGLLGGAFNPPHDGHLRLARLALDHLDLDELRFVPTALSPHK
                     PDPGGPGAGARVRLLTEALKGFDRRAKVETLEIERGGSSYTVDTLEALCLKEPGIAWI
                     LVMGSDQLPGLPAWRRVARIFELASAAVALRPGAAFEAPVLPGLTLVTRWSGRPGELI
                     ALPATDLDLASSDLRARLHAAPDQDPGGLQPQVLGTIRSENLYR"
     gene            4438..4812
                     /gene="rsfS"
                     /locus_tag="VK150_09510"
     CDS             4438..4812
                     /gene="rsfS"
                     /locus_tag="VK150_09510"
                     /inference="COORDINATES: protein motif:HMM:TIGR00090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HLP31588.1"
                     /translation="MSLDSRLATVVDAARSKKAFRIRLVDVKDIASFTDTFAFMSGGS
                     DRQNRAIAEAVEDALKLTGERPISREGETNGNWVLLDFGNLVVHVMDEETRRHYNLEG
                     LWDAGRELELPAEVHPASDARP"
     gene            4823..6076
                     /locus_tag="VK150_09515"
     CDS             4823..6076
                     /locus_tag="VK150_09515"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HLP31589.1"
                     /translation="MPVPQINAFEAMQARLRVASQLYGLDDALFKVFMAPNRSMIVSL
                     PVLMDNGQWEVFTGYRVQHNVARGPAKGGIRYDLNVTLDEVKALAAWMTWKTAVVDVP
                     FGGGKGGVVCDPSRLSLGEKERLTRRYIAEIMDIIGPDRDVPAPDMGTDAQTMAWVLD
                     TYSMHVRQTENAVVTGKPLGLGGSLGRNEATGRGILITAREAMQRLGKPLAGATVAVQ
                     GFGNVGSQAARLLHEAGARIVAISDLQGAIKNDRGLDIHALLKHAAEAKTVAGFKGAE
                     PMEPASLLTHPVDILVPAASENQITEENAAHVRAKIIVEGANGPTTPEADPILLEHGV
                     LVVPDILANAGGVTVSYFEWVQNRQGFYWREREVNERLVDYMTHAFQATFATTDKYKT
                     NPRIGAYILALDRVAQAMRYRGFYA"
     gene            complement(6138..6584)
                     /locus_tag="VK150_09520"
     CDS             complement(6138..6584)
                     /locus_tag="VK150_09520"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HLP31590.1"
                     /translation="MSTSTIRLHRVLRATPERVYRAFLDADAMVKWLPPHGFTGKVHH
                     LDARVGGTYRMSFTNFSTGHSHAFGGAFLELVPNERIKHTDTFDDPNLPGEMRTTITL
                     TPVSCGTELQIVQEGIPAPIPPEACYLGWQESLLLLAQLIEAEIPG"
     gene            complement(6669..>7272)
                     /locus_tag="VK150_09525"
     CDS             complement(6669..>7272)
                     /locus_tag="VK150_09525"
                     /inference="COORDINATES: protein motif:HMM:NF013242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31591.1"
                     /translation="AGPEIDLGRCLFCPDCVEACPEDALAFTGDHRLATRTREDLVRT
                     PGSEYRLAAALDGELKRLFGRSLKLRVVSAGGCNGCEVDVNVLNTLAWDLGRFGIQYV
                     ASPRHADGLLVCGPVTRNMELAVRKTYDAVPGPKIVIAVGACAIGGGPYFRQEQQLGG
                     VAGTLPVDLFIPGCPPHPLTILDGLLRLLGRLEAEGRVSA"
BASE COUNT         1176 a         2586 c         2414 g         1096 t
ORIGIN      
        1 ggcgggctcc gcctccgacc ggctgcgcac cacgaagctc gccttcaccg ccggcctggg
       61 ctggcagctc tccgagcgcg tgaacctcga ggggcgctac gtgttcagcg gcatccggaa
      121 gaccttcgac gccaacaccg cccaggtgag cctgggctgg cggttctagg gcctcaccgg
      181 gacacggggc gcccgcgagg ggccccgtgt cagatcccgt attccttcca gcggcggttc
      241 acgcggtcga ggatctcccc gggaaacacc aggtcccgcg gccactcgcg tgcgtagccg
      301 tcccagggcc gattcttccg ggtggcgtca atgcccacct tgctgccgaa ggcgaagcgg
      361 tcggcggcgt ggtcgagcac atccagcggc ccttcggtga agagcatgtc ccgcttggga
      421 tccacgttgc tggtgagacg gaagagcacc tcgttcaggt cgtgggggtc gatgtcttca
      481 tccaccacca cgatgccctt ggtgaacatg atctggcccg tgccccagat ggcgttcatg
      541 accttctggg catggcccgg gtattccttt ttcatggaga ggatcaccag gttgtggaaa
      601 gcgcccgccg cgggcaggtg catgtcgcgg atctcgggca gcaccattct cagcagcggc
      661 aggaagatgc gctccgtggc caggcccagg taggcgtcct cctggggcgg gcggcccacg
      721 atggtggcgg ggaacaccgg gttcttccgc agggtgatgg cctccacgtg cagcacgggg
      781 tagtcgtcgg ccagggagta gtacccggtg tggtcgccga agggaccctc ccggcgcagc
      841 tcgccggggt tcacgtagcc ctcgatgacg agctccgaat ccgccggaac ctccaggtcg
      901 ttggtcacgc agggcaccat ctcgatgccc tcgccccgca ggaagcccgc gaacatcacc
      961 tcgctgagga agggcggcag gggcgcggtg gcggcgtagg tcagcgccgg atcgccgccg
     1021 aagctcacgg ccacgggcat gcgctcatcc ttcgcgtagc catggcggtt ccgggcgccg
     1081 tcgtggtgca gctgggtgtg gaagcccagc gtccggtcgt cgtagacctg caggcggtag
     1141 aggcccacgt tgcggtggcc ggtctgcttg ttgcgggtgt ggctcatgcc cagggtgatg
     1201 aaggggccgc catcctcggg ccaggtggtg agcacgggca ggtccgtgag cttcacctgg
     1261 tcgcccttga gcacgacctc ctggcagatg cccttccgca cggtcttggg catccagttg
     1321 ccgacctccg ccagcacggg cagcttggcc agcttctcga agaacccggt gccgggcttg
     1381 ggcatggcct cctgcaccag cttttcgatg cggtcggcga tggcgtccag cccccggggc
     1441 tcccggtcca cccccagggc catctccatg cgcttcaggc tgccgaaggc gttcatggcc
     1501 acgggcatgg tcttcccggc gggttgttcg aagagcaggg ccttcccgcc cccgggctgc
     1561 ttggagaccc ggtcggcgat ggcccccatc tccaggttcg ggtccaccgg gggggctacc
     1621 cgggccagct cgcccgcggc ctcgagctgc ttcaggaagg tctggaaatc acgggccatg
     1681 ggaatctccg gatcccgatc atcccatccc cggcggccgg cctgaagccc aagtccccgg
     1741 gttcaagaat ttcccttgag acgacagggt tttccccgca tactgatggg ccttgccctg
     1801 gccgtgggct cccaagcgca tccgaatgga ctgccgccca cacgccccaa ccaaagaggt
     1861 tttcatgttc gcaatcatca agaccggcgg gaagcagtac cgcgtcgccg agggcgatat
     1921 cctccgcgtg gaaacgctgg agaaggatcc caagcaggcc gtgaccttcg accaggtgct
     1981 gctcatcgac aacaacgggg acctgaaggt gggcaagccc accgtgcagg gcgccacggt
     2041 cgaggccgag gtcatcaccc atgaccgtgc caagaaggtg atcatcttca agaagaagcg
     2101 caccaccacc tatcagcgca cccagggcca tcgccagaac tacaccgagg tccgcatcaa
     2161 ggccatcaag gggtgatgct gtccgggggt tccgcgcttg cgcgcacacc cccgggaccc
     2221 ccgatgctcc ggcgggatga acccgcctcg catcctcccc tctcccattc atgaatcctg
     2281 atttcaagtg aggtagttcc atggctcata aaaaaggcgt cggttccagc cgcaacggtc
     2341 gtgattccca ctcccagcgc ctcggcgtga aggagttcgg tggcgaagtg gtccccggcg
     2401 gttccatcct cgtccgccag cgcggcacca agttcaaggc cggcatcaac gtcggcatgg
     2461 gcaaggacca caccctgttc gccctcattg acggcaaggt gcgcttccag gacaagggcc
     2521 agagcggccg cttcatccac atcgacccca tcgaagggta gccttcgcca gccttccacc
     2581 acggaggcac ggagtgcgcg gagttacaga cacggagaaa gcactgagga gagaccctcc
     2641 gtgtttttct ccgtgttttc ctcagtgacc tccgtgcctc cgtggttcat cttttcctca
     2701 gatcggcctc acccatgttc cttgatcacg tccagcttcg cgtcaccgcc ggccacggcg
     2761 gctccggcgc catgagcttc cgccgtgaga agttcgcccc cgagggcggg cccgacggcg
     2821 gcgacggcgg caagggcggc tcggtgttcc tgcgggccaa ccgcgccctc aacaccctca
     2881 acccctaccg caacaagcgg gagttcgccg cggagcgcgg gcggcagggc gaaggctgca
     2941 tgcgccacgg caaggacggc ctggacgtgc tgctggaggt gcccctgggc accgtggtga
     3001 aggacggcga gaccggcgag gtgctggccg agctgctggc ccacggcgaa gacgtctgcg
     3061 tggcccgcgg cggccggggc ggcctgggca acacgaactt caagagcgcc accaaccgca
     3121 ccccccgcca ccaccagccc ggcgaggacg gcgaggcccg caccctggat ctggagctga
     3181 aactcatcgc cgacgtgggc ctggtgggat ttcccaacgc cggcaagagc accctcgtga
     3241 gccgcctcag cgcggcccgg ccgaagatcg ccgactaccc cttcaccacc ctggaacccc
     3301 agctcggcgt ggtgagcctg gaccgcttcg gcggcgacct cctcgacagc tgggtcatcg
     3361 ccgacatccc gggcctcatc gagggcgcgg cctcgggcgc gggcctgggc atccagttcc
     3421 tccgccacgt ggagcgcacc cggatgctcc tccagctggt ggacctctcc gatcccgtca
     3481 tggagccgga ggaggccatc cgcgtgatcg agggcgaggt ccaggccttc agccccgtgc
     3541 tggccgccaa gccccgctgg ctcgtgggca ccaagctgga cgcgctgcag gatgaatccc
     3601 ggcgcgaggc tttcgaggcc atctgcctcc agcggggaca gaagcccatc ttcatttccg
     3661 gcgtcaccgg cgaggggctg cgggacctgg ccttcgccgt ggatgcggcg ctgaagggcg
     3721 gccccggctt cgccctcgaa ccccggaacg actgggagga ggccccgcgc tcggaacgcg
     3781 ccgcgaccac cggagaggcc cggtagtgcg cgtcggcctg ctcggaggcg cgttcaaccc
     3841 tccgcacgac ggccacctca ggctggcgcg gctggccctc gaccacctcg acctggacga
     3901 gctccgcttc gtacccacgg ccctcagccc ccacaagccc gaccccggcg gccccggcgc
     3961 cggagcccgg gtgcggctgc tcaccgaggc cctgaagggg tttgatcgcc gcgccaaggt
     4021 ggaaaccctg gaaatcgagc ggggcggctc cagctacacg gtggatacgc tggaggccct
     4081 ctgcctcaag gaaccaggaa tcgcctggat cctcgtcatg ggcagcgacc agctgcccgg
     4141 cctcccggct tggcgccggg tggcgcgcat cttcgagctg gcctccgccg cagtggccct
     4201 tcggcccggc gcagccttcg aagcgcccgt ccttcccgga ctcaccctcg tgacccgatg
     4261 gtccggccgc cccggcgagc tcatcgccct gcccgccacc gacctggacc tggcctccag
     4321 cgacctccgg gcgcgcctcc acgcggcgcc ggaccaggat cccggcggcc tgcagcccca
     4381 agttctcggt accatccgtt ctgaaaacct gtatcgttag cctgctctgg agcccgcatg
     4441 tcccttgatt cccggctcgc gaccgtcgtc gacgccgccc ggtccaagaa agccttccgc
     4501 atccgcctcg tggacgtgaa ggacatcgcc agcttcaccg acacgttcgc cttcatgagc
     4561 ggcggcagcg atcgccagaa ccgcgccatc gccgaggccg tggaggacgc cctgaagctc
     4621 accggcgagc gccccatctc ccgcgagggc gaaaccaacg gcaactgggt cctcctggat
     4681 ttcggcaacc tcgtggttca cgtcatggat gaagagaccc ggcgccacta caacctcgaa
     4741 gggctgtggg acgccggccg cgagctggaa ctgcccgccg aggtccatcc cgcttccgac
     4801 gcccgtccgt aggagaagtc tcatgccggt cccccagatc aatgcgttcg aggccatgca
     4861 ggcccgcctg cgcgtggcgt cccagctcta cgggctggac gacgcgctct tcaaggtgtt
     4921 catggcgccc aaccggtcga tgatcgtgag cctgccggtg ctcatggaca acggccagtg
     4981 ggaggtcttc accggctacc gcgtgcagca caacgtggcc cgcggccccg cgaagggcgg
     5041 catccgctac gacctgaacg tcaccctgga cgaggtcaag gccctggcgg cctggatgac
     5101 ctggaagacc gccgtggtgg acgtgccctt cggcggcggc aagggcggcg tggtgtgcga
     5161 ccccagccgc ctgagcctgg gcgagaagga gcgcctcacc cggcgctaca tcgccgagat
     5221 catggacatc atcggcccag accgcgacgt gcccgccccc gacatgggca cggacgccca
     5281 gaccatggcc tgggtgctcg acacctactc catgcacgtg cgccagaccg agaacgccgt
     5341 ggtgacgggc aagcccctgg ggctcggcgg cagcctgggc cgcaacgagg ccacgggccg
     5401 cggcatcctc atcaccgccc gcgaggccat gcagcgcctg ggcaagcccc tggccggcgc
     5461 caccgtggcg gtgcagggct tcggcaacgt cggcagccag gccgcccgcc tgctccatga
     5521 agccggtgcg cgcatcgtgg ccatcagcga cctccagggc gccatcaaga acgaccgggg
     5581 cctggacatc cacgccctgc tcaagcacgc cgccgaggcc aagaccgtgg ccggcttcaa
     5641 gggcgccgag cccatggagc ccgcctcgct gctcacccac ccggtggaca tcctggtgcc
     5701 cgcggcttcc gaaaaccaga tcaccgagga gaacgccgcc catgtccggg cgaaaatcat
     5761 cgtggaaggc gccaacggcc ccaccacgcc cgaggccgat cccatcctgc tggagcatgg
     5821 cgtcctcgtg gtgcccgaca tcctcgccaa cgccggtggc gtcaccgtca gctacttcga
     5881 atgggtgcag aaccgccagg gcttctactg gcgcgagcgg gaagtgaacg agcggctggt
     5941 ggactacatg acccacgcct tccaggccac cttcgccacc accgacaagt acaagaccaa
     6001 cccccgcatc ggcgcctaca tcctggccct cgaccgggtg gcccaggcca tgcggtaccg
     6061 aggcttctac gcctgaggcg gaccaccgcg ccgtacgaaa ggggaccggc ctgcgggccg
     6121 gtcccctttc gtacggatca gccgggaatc tccgcctcaa tcagctgcgc cagcaggaga
     6181 agcgactcct gccagcccag gtagcaggcc tcgggcggaa tgggcgcggg gatgccctcc
     6241 tgcacgatct gcaactcggt gccgcagctg accggcgtca gggtgatggt cgtccgcatc
     6301 tcgcccggca ggttcgggtc gtcgaaggtg tccgtgtgct tgatgcgctc gttcggcacc
     6361 agctcgagaa aagcgccgcc gaaggcgtgg ctgtggccgg tggagaagtt ggtgaaggac
     6421 atccgatagg taccgcccac ccgggcgtcc aggtggtgga ccttcccggt gaaaccgtgc
     6481 ggcggcagcc acttgaccat ggcgtcagcg tcgagaaagg cccgatagac acgctccggc
     6541 gtggcccgga gcacccggtg gaggcggatg gtgctggtgg acatggtcgg gtctcctcgt
     6601 tggtagcgcc tggaggaagg gtcgagtgag ggtacgatgc ctgaccggcc accggggtta
     6661 cggcccggtc aggcgctgac ccgcccctcg gcctccagcc gccccaggag ccgcagcagg
     6721 ccgtccagga tggtgagggg gtggggcgga cagccgggga tgaagaggtc caccggcagt
     6781 gtgccggcga cgcccccgag ctgctgttcc tgccggaagt agggcccccc tccgatggcg
     6841 caggcaccca cggcgatcac gatcttgggc ccgggcacgg cgtcgtaggt cttgcggacc
     6901 gccagctcca tgttgcgcgt caccgggccg caaacgagga ggccgtccgc gtggcgcggg
     6961 gaggccacgt actggatgcc gaaacggccc aggtcccagg cgagggtatt cagcacgttc
     7021 acgtccacct cgcagccgtt gcacccgccc gcgctcacca cgcggagctt cagcgacctg
     7081 ccgaacagcc gcttcagctc gccgtcgagg gccgccgcca ggcggtactc cgaacccggc
     7141 gtccgcacca ggtcctcccg ggtgcgggtt gccaggcggt ggtcgcccgt gaaggcgagg
     7201 gcgtcttcgg ggcaggcctc cacgcagtcg ggacagaaga ggcagcggcc caggtcgatc
     7261 tcggggcccg cc
//
LOCUS       DATGWW010000651         1686 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_211553, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000651 DATGWW010000000
VERSION     DATGWW010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1686
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211553"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..188)
                     /locus_tag="VK150_09530"
     CDS             complement(<1..188)
                     /locus_tag="VK150_09530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31592.1"
                     /translation="MLKKVAIFKALDVEIKKQRGPVAVKDAYKGHHSLKEELSQPGIT
                     ILGEVAGGDPGRGQVRES"
     gene            678..1304
                     /gene="upp"
                     /locus_tag="VK150_09535"
     CDS             678..1304
                     /gene="upp"
                     /locus_tag="VK150_09535"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF001097.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HLP31593.1"
                     /translation="MTIHVVDHPLVHHKLSLIRDRKTPGSLFRALIDEVGLILAVEST
                     RTLPTESVVVETPLERTGTLRLKSLDPVLVPVLRAGLGLLPAFLQLMPTAKVGHLGLY
                     RDHDSLVPVPYYRNFPPLLEARPVFVLDPMLATGGSASEAVRQLKGAGAVNLTLVSVL
                     AAPEGLERLHGDHPDLTIVVGAVDRQLNDKGYILPGLGDAGDRLFGTA"
     gene            complement(1301..>1686)
                     /locus_tag="VK150_09540"
     CDS             complement(1301..>1686)
                     /locus_tag="VK150_09540"
                     /inference="COORDINATES: protein motif:HMM:NF014604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HLP31594.1"
                     /translation="TSPLGPSAPPEVPAIPEHLVILLLEGGQRFLAKAEEAIRHRESM
                     ARDHHVKKALAILQELHRGLNLEDGGDLAASLARTYDWWIQEVQEAAAQDDEHRLRIV
                     SSQMGDIRKTWEHVLFRGQGMSEAP"
BASE COUNT          266 a          610 c          493 g          317 t
ORIGIN      
        1 taggactccc ggacctgccc gcggccggga tcacccccgg ccacctcacc caagatggtg
       61 attccaggct ggctgagctc ttctttcagg gagtggtgcc ccttgtaagc atccttaacc
      121 gccacggggc ccctctgctt cttgatttcc acatccaggg ccttgaagat ggcgactttc
      181 tttagcattt cccactctcc aaatctcaga tacctcgctg ctggccctat ggggaagatg
      241 atggtccgtt tttcctctga ttcaacatga aaccagcgat ctggatgagg tcaacagaga
      301 aatctaaaaa atcttcattt tttttgacgc tacctccccc ccaaccaccc attcgtttcc
      361 gacctccgag acgcccgttt cgatcccgcc tccgccgatg cgatcgctcg gatggaatca
      421 aacgccccga tcaagcaggg tgattgatcg ctgtggattc gcaccacccg tgcgtttaca
      481 gcgttcagcc gcgcaccgcc acatccgcct acagcacagc gcaccgccgg acgtggcacc
      541 ggttgaaagg gctggagtcg gcccgtcggc gccatgcgcc gaccccctgg ccctgctacg
      601 cttcaactcg cgccttcccc ctggggcgcc gtgtgaacgg cggtccggac tcccacggga
      661 agggcggaga ggcccccatg acgatccatg tcgttgacca cccgctcgtc catcacaagc
      721 tctccctcat ccgcgaccgg aagacgcccg gcagcctgtt ccgcgcgctg atcgacgagg
      781 tgggcctgat cctcgccgtc gagtcgacgc gcacgcttcc cacggaatcg gtggtcgtcg
      841 agacgccgct ggagcgcacg ggcaccctcc ggctcaagtc cctcgacccc gttctggtgc
      901 cagtcctccg cgcgggcctc ggcctccttc ccgccttcct ccagctgatg ccgaccgcca
      961 aggttgggca cctcggcctc taccgggatc acgattcact cgtcccggtg ccctactacc
     1021 gcaacttccc gcccctgctg gaagcgcggc ccgtcttcgt gctcgatccc atgctcgcca
     1081 cgggcggcag cgcctcggag gccgtccggc agctgaaggg cgcgggcgcc gtcaacctca
     1141 ccctcgtgtc ggtcctggcc gcgccggaag ggctcgagcg gcttcacggc gaccacccgg
     1201 acctgaccat cgtcgtcggc gcggtggatc gccagctcaa cgacaagggc tacatcctcc
     1261 cgggcctcgg cgatgcgggt gaccggttgt tcgggacggc ctagggcgct tccgacatcc
     1321 cctggccccg gaagaggacg tgttcccagg tcttccggat gtcgcccatc tgggaggaga
     1381 cgatccgcag gcggtgctcg tcgtcctgag cggccgcttc ctggacctcc tgaatccacc
     1441 agtcgtacgt gcgggccagg ctcgccgcca ggtctccacc gtcctcaagg ttcaggccgc
     1501 gatggagttc ctgaaggatg gccagggctt tcttcacgtg gtgatcccgg gccatggact
     1561 cgcggtggcg gatggcctcc tcggccttcg ccaggaaccg ctgaccgcct tcgagcagaa
     1621 ggatcaccag gtgctctgga atcgccggca cctcaggcgg ggccgagggt ccaagggggc
     1681 tcgtgc
//
LOCUS       DATGWW010000652         1581 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_211609, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000652 DATGWW010000000
VERSION     DATGWW010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211609"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..861
                     /locus_tag="VK150_09545"
     CDS             <1..861
                     /locus_tag="VK150_09545"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HLP31595.1"
                     /translation="LQTGYQALGETRGFELFTDEAVGRTVREAVRLALQSLDAQPAPA
                     GTFPVVLSSSAGGTMIHEACGHGLEADLALAGMSAFAGKLGQKVAAEGVTIIDDGTLP
                     HKRGSQAVDDEGNPSSRVVLIENGILKAYLQSRKTARRMNTGPTGNGRRESYRHLPIP
                     RMRNTFLAAGTEAPEAILRDLDRGLLVKHMGGGQVDTVTGNFVFQVTEGYWVENGEAK
                     YPVKNATLSGCGPEVLKGLTRIGSDLHHFDIGTCGKDGQGVPVSDALPTILCPALVVG
                     GTAEPLPSVL"
     gene            963..>1581
                     /locus_tag="VK150_09550"
     CDS             963..>1581
                     /locus_tag="VK150_09550"
                     /inference="COORDINATES: protein motif:HMM:NF013673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase modulator"
                     /protein_id="HLP31596.1"
                     /translation="MTPFATFIPESLEERLQDGIRHALSLGAEGAEVFLSVSRSRKAK
                     VQNGALEDLTVSKRGGLGVRVIRAGSKGFRTGLATTTDLAASDFRELFAQAWELSALG
                     DEDPWLRQADPSGADDLPSRFNPEVEAITPEQRIAWALDLEAQARRASAKVAAVRESA
                     WSDGSGASLLLTQKGVRTPDVWSSCSAAIELAVADAEERQAAWHWE"
BASE COUNT          252 a          585 c          517 g          227 t
ORIGIN      
        1 ctgcagaccg gctaccaggc cctgggcgag acccgcgggt tcgagctgtt caccgacgag
       61 gccgtgggcc gcaccgttcg cgaggccgtg cgcctggccc tgcagtcact cgacgcgcaa
      121 cccgccccgg ccggcacctt ccccgtggtg ctcagcagca gtgccggcgg cacgatgatt
      181 catgaggcct gcggccacgg cctcgaagcg gacctcgccc tcgcgggcat gagcgccttc
      241 gcgggcaagc tggggcagaa ggtcgccgcc gagggcgtga cgatcatcga tgacggcacc
      301 ctgccccaca agcgcggcag ccaggctgtg gacgacgagg gcaacccctc cagccgcgtg
      361 gtcctcatcg agaacggcat cctgaaggcc tacctccagt cccggaagac cgcgcgccgg
      421 atgaacaccg gacccacggg caacgggcgc cgggagagct accgccacct gcccattccc
      481 cgcatgcgca acaccttcct cgccgccgga accgaggccc ccgaggccat cctccgcgac
      541 ctggaccggg gcctcctggt caagcacatg ggcggcggcc aggtggacac ggtcaccggc
      601 aacttcgtgt tccaggtgac cgagggctac tgggtggaga acggcgaggc gaagtacccg
      661 gtgaagaacg ccaccctgag cggctgcggt cccgaggtgc tgaagggcct cacgcggatc
      721 ggctcggacc tccatcactt cgacatcggt acctgcggca aggatggcca gggcgtgccc
      781 gtcagcgacg ccctccccac catcctctgc cccgccctcg tggtgggcgg caccgccgaa
      841 cccctgccga gcgtgctttg aacctttgaa tttgaaaccg cagatgacac tcccctcgcc
      901 gttctgctgt ttcccatctg cgcccatctg cgtcatctgc ggttagatcc aaaaggtttt
      961 ccatgacccc cttcgcgacc ttcattcccg agtccttaga agaacggttg caggacggca
     1021 tccggcacgc cctgagcctg ggcgcggagg gcgccgaggt cttcctctcg gtttcccgca
     1081 gccgcaaggc caaggtccag aacggcgcgc tggaagacct cacggtgagc aagcggggcg
     1141 gtctgggcgt gcgggtgatc cgcgccggga gcaagggctt ccgcaccggg ctcgccacca
     1201 ccaccgacct ggccgcgtcc gacttccggg agctcttcgc ccaggcctgg gagctcagcg
     1261 ccctcggtga tgaggatccc tggctgcgcc aggccgaccc ttccggcgcc gatgatctgc
     1321 ccagccgctt caatcccgag gtcgaggcca tcacgcccga gcagcgcatc gcctgggccc
     1381 tcgacctcga ggcccaggcc cgtcgggcct ccgcaaaagt ggccgccgtc cgggaatccg
     1441 cctggagcga cggctccggc gccagcctgc tgctcaccca gaagggcgtg cgcacgccgg
     1501 acgtctggtc cagctgctcc gcggccatcg agctggccgt ggccgatgcc gaagagcggc
     1561 aggccgcgtg gcactgggag g
//
LOCUS       DATGWW010000653         1910 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_396920, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000653 DATGWW010000000
VERSION     DATGWW010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1910
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396920"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            161..880
                     /locus_tag="VK150_09555"
     CDS             161..880
                     /locus_tag="VK150_09555"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HLP31597.1"
                     /translation="MLFLRSVLFYLGMWIITLPLGIATPALMPFKPATRYRYLTIWGK
                     TVLAWLRFTCNIRHEVEGREHIPAQASVILAKHQSTWETIAFQGIFPTQTWVLKRELL
                     RIPLFGWGLAACWPVAIDRTAGKEALRQVVDQGKERLANGFWMVVFPEGTRMAPGARG
                     RYAVGGALLAEKAGVPVVPVAHNAGEHWPRGRLLKFPGTIKVVIGPPIETRGRKASEI
                     NALTEEWIEGTMSRISTPSGS"
     gene            999..>1910
                     /locus_tag="VK150_09560"
     CDS             999..>1910
                     /locus_tag="VK150_09560"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: protein motif:HMM:NF006778.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HLP31598.1"
                     /translation="MQNRRVSLTQFIIEEQRHIQGATGDFTSLLNDIVTACKQISSLV
                     NQGALVGVLGSAGSENVQGETQKKLDIISNEIFLRTNEWAGHLAAMASEEMDDIYHIP
                     KVYPRGKYLLTFDPLDGSSNIDVNVSVGTIFSILRCPGEGDSPSAKAFLQPGTRQVAA
                     GYAIYGPSTMLVLTTGHGVNGFTLDQSIGEFVLTHPNITIPEDTKEFAVNASNSRFWE
                     APVKRYVDECLAGKTGSRDKDFNMRWIASMVAEVHRILTRGGVFMYPMDSKLKEKGGK
                     LRLMYEANPMAFLVEQAGGAATNARERI"
BASE COUNT          337 a          676 c          572 g          325 t
ORIGIN      
        1 ccctgcgcga cctggaggcg gcccgggccg tgggcgggct gccgattctg gtccgcaccg
       61 gcaagggggc gaagaccgtc gccaagggca agggactcga aggcgtgccc gtctaccgcg
      121 acctggccga ggccgtcgaa accctggtga gcctcgactg atgctgttcc tccgcagtgt
      181 tctcttctac ctgggcatgt ggatcatcac cctgcccctc ggcatcgcta cgccggccct
      241 gatgcccttc aagccggcga cccgttaccg ctacctcacg atctggggca agacggtgct
      301 cgcctggctg cggttcacct gcaacatccg ccacgaggtg gaagggcggg agcacatccc
      361 ggcccaagcc tccgtcatcc tggccaagca ccagtccacc tgggaaacca tcgcgttcca
      421 gggcatcttt ccgacccaga cctgggtgct gaagcgggag ctgttgcgga tcccgctctt
      481 cggctggggc ctcgccgcct gctggcccgt ggccatcgat cgcaccgccg gcaaggaggc
      541 gctgcgccag gtggtggatc agggcaagga gcggctggcc aacggattct ggatggtggt
      601 cttcccggaa gggacccgca tggcccccgg tgcccgtggc cgttacgcgg tcggtggcgc
      661 cctgctggcg gagaaggccg gcgtgcctgt ggtccccgtg gcccacaacg ccggcgagca
      721 ctggccccgc ggccggctcc tcaaattccc cggcaccatc aaggtggtga tcggtccccc
      781 catcgagacc cggggccgca aggcatccga gatcaatgcc ctcaccgagg agtggatcga
      841 gggcaccatg agccgcatct ctaccccttc cgggtcatag agcttcatta gtaaatccgt
      901 atacctttaa ctaccttcgg gtcgtgcccg cagaggccgc ccgtttgccg gtccgttttc
      961 cggccctttt gctatttact tcaggaagac cacaagccat gcagaaccgc cgcgtttcac
     1021 tgacgcagtt catcatcgag gagcagcgcc acatccaggg cgccaccggc gacttcacct
     1081 cgctgctcaa tgacatcgtc accgcctgca agcagatctc cagcctcgtg aaccagggcg
     1141 ccctcgtggg cgtgctgggc agcgccggtt ccgagaacgt gcagggcgag acccagaaga
     1201 agctcgacat catctccaac gagatcttcc tccggaccaa cgagtgggcc ggccatctgg
     1261 ccgccatggc gtcggaagag atggacgaca tctatcacat tcccaaggtc tacccgcgtg
     1321 gcaagtactt gctcacgttt gatccgctgg acggctcctc caacatcgac gtgaacgtct
     1381 ccgtgggcac catcttctcc atcctgcgct gccccggcga aggcgacagc ccctcggcca
     1441 aggccttcct ccagcccggc accaggcagg tggccgccgg ctacgccatt tatggaccct
     1501 ccaccatgct ggtgctgacc acgggccatg gcgtcaacgg cttcaccctc gaccagagca
     1561 tcggcgagtt cgtgctgacc caccccaaca tcaccatccc cgaagacacc aaagagttcg
     1621 cggtcaacgc ctccaactcc cgcttctggg aggcgccggt caagcgttac gtggacgaat
     1681 gcctggccgg caagaccggt tcccgcgaca aggacttcaa catgcgctgg atcgcctcca
     1741 tggtggccga ggtgcatcgc atcctcaccc gcggcggtgt cttcatgtac cccatggaca
     1801 gcaagctgaa ggagaagggc ggcaagctgc gcctcatgta cgaggccaac cccatggcct
     1861 tcctcgtgga gcaggccggc ggtgccgcca ccaacgcccg cgagcgcatc
//
LOCUS       DATGWW010000654         2262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_212204, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000654 DATGWW010000000
VERSION     DATGWW010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212204"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1307)
                     /locus_tag="VK150_09565"
     CDS             complement(<1..1307)
                     /locus_tag="VK150_09565"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HLP31599.1"
                     /translation="MLDVALVLASSGCWFAGALLSTASRVPERWTLGLGLLGALLAWG
                     ASVHLLLGAPVSALAFQAWGHPARLELDALSAAFLLPLHLIGGLGLIYGQRYWPVQGH
                     RASGRTLRFFYGMLVAAMTLLFLARHGLLFLVAWELMAVSAFFLVGTEHERPEARHAS
                     WIYLACTHTGTLLLTAMVILMAHRMGGLLWIPLPASTSPWFEGGILLLAVAGFGFKAG
                     VLPLHFWLPSAHANAPSHVSAILSAVMLKTGIYGLLRVSSLLPAIPRGVGGTLLALGA
                     LTALYGVGNALAQRDYKRLLAYSSIENLGVVTMGVGLGWTGRAAHDPWLMALGFGGAL
                     FHVWNHAVFKGLLFYGAGALLHATGTRDMEALGGLAHRMPRTALVLLPGVLAVAALPP
                     FNAFLSEWFLYRGLFVSLDRGYPWSAALGLVALALAGGLAAGA"
     gene            complement(1535..>2262)
                     /locus_tag="VK150_09570"
     CDS             complement(1535..>2262)
                     /locus_tag="VK150_09570"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HLP31600.1"
                     /translation="TTKDVWIDFDAAHSIQVVQAGASGQYLLRPTIRAFDRLATGSIH
                     GTLTDAATTQPLAGARVYAEGFDGTGAAFIARSTVTDSMGAYTLDLLPVGATYHVVSQ
                     PVVGTVAPVAYAAKASDGFALSAMLPVFTYNAAFTVAASVGGVGGNLTPMATASQSDR
                     VHLLQSLTTASGDRTFIVQSTMATVGASAETYAFPTVPVGTYTVQALRSTLNADGSTS
                     TSLSAAQPAAVTVGVTAAVNLGL"
BASE COUNT          393 a          754 c          853 g          262 t
ORIGIN      
        1 aaggcccccg ccgccaagcc gcccgccagg gccagggcca ccagtcccag ggccgccgac
       61 cagggatagc cccggtcgag ggagacgaag aggccccggt agaggaacca ttcgctgagg
      121 aaagcgttga aggggggcag cgccgccacg gcgagcacgc ccggcaagag gaccagggcc
      181 gtgcgcggca tccggtgggc gaggccgccg agcgcctcca tgtcccgggt gccggtggcg
      241 tgcagcagcg cacccgcccc gtagaacagc aggcccttga agaccgcgtg gttccagaca
      301 tggaagaggg ccccgccgaa acccagggcc atgagccagg ggtcgtgggc ggcccggccc
      361 gtccagccca ggcccacgcc catggtgacg acgccgaggt tctcgatgct ggagtaggcc
      421 agcagccgct tgtagtcccg ctgcgccagg gcgttcccca cgccgtagag tgccgtgagg
      481 gcgcccaggg ccagcagggt tccccccacg ccccggggaa tggccggcag caggctcgag
      541 acgcgcagga gcccgtagat ccccgtcttg agcatgaccg ccgagaggat cgcggagacg
      601 tggctcggcg cgttggcgtg ggccgagggc agccagaagt ggagggggag cacgccggcc
      661 ttgaagccga agcccgccac ggccaggagg aggatgcctc cttcgaacca gggtgaggtg
      721 gacgcaggca gagggatcca cagcagcccg cccatccggt gggccatgag gatcaccatc
      781 gccgtgagca gcagggtgcc cgtatgggtg caggccaggt agatccagct ggcgtggcgg
      841 gcctcggggc gctcatgctc ggtgcccacc aggaagaacg ccgacacggc catcagctcc
      901 caggccacga ggaacaacag cccgtggcgg gcgaggaaga gcagtgtcat ggcggccacc
      961 agcatcccgt agaagaagcg cagggtgcgg cccgaggccc ggtggccctg gacgggccag
     1021 tagcgctggc catagatgag cccaagcccg ccgatcaggt ggaggggcag caggaaggcg
     1081 gcggagaggg cgtccagctc cagccgggcg gggtgccccc aggcctggaa ggccagagcc
     1141 gagacggggg cgccgagcag caggtggacg gacgcgcccc aggccagcag cgcgcccagc
     1201 aggcccaggc ccaaggtcca gcgctcgggc acccgcgatg ccgtggacag cagggccccc
     1261 gcaaaccagc acccggatga cgcgaggacc aaggctacat ccagcatcag cacgctccgg
     1321 gttctgggaa ccggacacgg cggatcaggg gtggggcggg accgccttgg acaaggaggc
     1381 tcgtcatcag atgggccggg accggttggg cccatgctac tcccaaccag gttccctcat
     1441 caaagcagct gcgaaacgga aagcgcccta gggccacgcg accagggccg gggacccgcc
     1501 tccgggttcc ccggccccat tcgccaactg gccttcagag ccccaggttc accgccgcgg
     1561 tcacgcccac tgtcactgcg gcgggctgcg ccgccgacag ggaggtgctg gtgcttccgt
     1621 ccgcgttcag cgtgctgcgc agggcctgga ccgtgtaggt tccgacggga acggtgggga
     1681 aggcgtaggt ctcggcgctg gcgcccaccg tggccatggt ggactggacg atgaaggtgc
     1741 ggtcgcccga ggctgtcgtc agcgactgga gcaggtggac ccggtcgctc tggcttgccg
     1801 tggccatggg cgtgaggttt ccgcccacac cccccaccga cgccgcgacg gtgaaggccg
     1861 cattgtaggt gaagaccggc agcatggcgc tgagggcgaa gccgtcgctg gccttggccg
     1921 cataggccac gggcgcgacc gtacccacca ccggctggct cacgacatgg taggtcgcgc
     1981 ccacgggcag cagatccagg gtgtaggcgc ccatggaatc ggtcaccgtg ctgcgggcga
     2041 tgaaggcggc gccggtgccg tcgaagcctt cggcgtagac ccgggcgcct gccaggggct
     2101 gggtggtggc cgcatccgtg agcgtgccgt ggatggagcc cgtcgccagc cggtcgaagg
     2161 cccggatggt ggggcggagg aggtactggc ccgaggcccc ggcctgcacc acctggatgg
     2221 agtgggcggc gtcgaaatca atccagacat ccttcgtcgt gc
//
LOCUS       DATGWW010000655         1769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_397186, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000655 DATGWW010000000
VERSION     DATGWW010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397186"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1769
                     /locus_tag="VK150_09575"
     CDS             <1..>1769
                     /locus_tag="VK150_09575"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HLP31601.1"
                     /translation="AGPYAGLDRFEARKRLVKDLETAGLLAAVEDRVSPIPYCYRSGD
                     VVEPYLLDQWFVYMKPLAEPALAAVEKGDTRFVPERYTKTYRAWLEPFKDWCISRQLW
                     WGHQIPAWYVVSETGGEKKHNTPVVVARSEPEACEEAVKRYGKNPKLVQDEDVLDTWF
                     SSALWPFSTQGWPEETADLKTFFPGDVLVTARDIIYFWVARMIFSSLKFLGKAPFHTV
                     YIHGTILDEKGQRMSKSKGNGIDPIEMIEKFGADAVRFALMILTTEGQDIKLSPVKFE
                     TGRNFANKLWNAVRFVLPHLEGNREAVKTGSLHLADRWILGRLDETIAKVTECLEPPT
                     CRFSEAATALYHFTWDEFCSTYLEIRKKVITSEATNPEARALKRQAVSVFAEVLEKLI
                     GLLHPFMPFITEEIHAAIGGKGQLITAAWPKPASSGVDVETAAAMGALLKVVDALRSI
                     RGDYALAPTQALDLDVSVDDPALLARLKADHDVILSLEKVGRLTIASGLQKPPFSASG
                     LIPGGRVFVPLQGILDPVTEKARLTKELSKAEGFAAAQAKKLENENFVKGAPAEVVEG
                     ERAKLKTQQDKIDKLKSALADLG"
BASE COUNT          325 a          584 c          582 g          278 t
ORIGIN      
        1 ggcgggcccc tacgcggggc tcgatcgctt cgaggcgagg aagcgcctgg tgaaggacct
       61 ggaaaccgcc ggcctgctgg cggcggtcga ggaccgggtc tcccccattc cctattgcta
      121 ccgcagcggc gacgtggtgg agccctacct gctggaccag tggttcgtgt acatgaagcc
      181 cctggcggag cccgccctcg cggccgtgga gaagggcgac acccgcttcg tgccggagcg
      241 ctacaccaag acctaccgcg cctggctgga acccttcaag gactggtgca tctcgcgtca
      301 gttgtggtgg ggccaccaga tcccggcctg gtacgtggtc tcggagacgg gcggcgagaa
      361 gaagcacaac acccccgtgg tcgtggcccg gagcgaaccg gaggcctgcg aggaggcggt
      421 gaagcgctac gggaagaacc cgaagctggt gcaggacgag gacgtgctcg acacctggtt
      481 ctcgagcgcg ctttggccct tcagcaccca gggctggccg gaggagaccg ccgacctcaa
      541 gaccttcttc cccggcgacg tgctggtgac ggcgcgagac atcatctact tctgggtggc
      601 gcgcatgatc ttctcctccc tcaagttcct ggggaaggcg cccttccata cggtatacat
      661 ccacggcacc attctggacg agaagggcca gcggatgtcg aagtccaagg gcaacggcat
      721 cgaccccatc gagatgatcg aaaagttcgg cgccgacgcg gtgcgcttcg ccctcatgat
      781 cctgaccacc gaggggcagg acatcaagct ctcgccggtc aagttcgaga cggggcgcaa
      841 cttcgccaac aagttgtgga acgcggtgcg cttcgtgctg ccgcatctcg aaggtaatcg
      901 cgaggcagtg aagacagggt ccctgcacct ggcggaccgg tggattctgg gccgcctgga
      961 cgagaccatc gcgaaggtga ccgagtgcct ggagccgccc acctgccgct tctcggaggc
     1021 ggccacggcc ctctaccact tcacctggga tgagttctgc tcgacctatc tcgaaatccg
     1081 caagaaggtg atcacctcgg aggcgaccaa tccggaggcc cgcgccctga agcgccaggc
     1141 cgtgtcggtg ttcgccgaag tgctcgagaa actcatcggt cttctgcacc ccttcatgcc
     1201 cttcatcacc gaggaaattc acgctgccat cggtggaaag gggcagctca tcacggcggc
     1261 atggcccaag cccgcctcgt cgggcgtgga cgtggagacg gccgcggcca tgggggccct
     1321 gctcaaggtg gtggacgccc tgcgctccat ccgcggcgac tatgccctgg cgcccaccca
     1381 ggcgctcgac ctcgacgtga gcgtggacga tccggccctg ctcgcccggc tcaaggccga
     1441 ccatgacgtg atcctcagcc tggagaaggt cggaagactc accatcgcct ccggcctcca
     1501 gaagccgcct ttctcggctt cggggctcat cccgggcggc cgcgtcttcg tgccgctaca
     1561 gggcatcctg gacccggtga ccgagaaggc ccgcctcacc aaggagctct ccaaggcgga
     1621 gggcttcgcg gccgcgcagg cgaagaagct cgagaacgaa aacttcgtga agggcgcgcc
     1681 ggccgaggtg gtggaaggcg aacgcgccaa gctcaaaacc cagcaggaca agatcgacaa
     1741 gctgaagtcc gctctagcgg acctcgggt
//
LOCUS       DATGWW010000656         1617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_397203, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000656 DATGWW010000000
VERSION     DATGWW010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397203"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..655
                     /locus_tag="VK150_09580"
     CDS             <1..655
                     /locus_tag="VK150_09580"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HLP31602.1"
                     /translation="NAREAAKVAALYGAGTAAKVIPQPGAGVGFLEGEMDLEVAGAKP
                     DGMLQLRILRELSSLLEGKADSSIVMELVLEGIYRGIGMDRTLFALLTPDRSELRTKF
                     MLGAKREQLADHFHFRMAGATHVFGQVLEKQAALWVDAQIHPEQERLLPMEVVSVTGR
                     IPFFVAPIVVNDRSIGLFYADRGVTGRPLDEESYESFRHFAQQASLGLSHLAKRGRH"
     gene            875..>1617
                     /locus_tag="VK150_09585"
     CDS             875..>1617
                     /locus_tag="VK150_09585"
                     /inference="COORDINATES: protein motif:HMM:NF020252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HLP31603.1"
                     /translation="MAVDPATGIASRSSLATWVERISTAEMPIFGHTVQQIVAVAEDD
                     EAPARRLAQVVLQDPSMTARTLKLVNSPFYNPRERTISTVSHAVVLLGFNTVRDLCLS
                     IALVDAFMQGTPRERFNHELARSIHAAVQARALAVKMGDDSPEEVFIAALLYHLGDLA
                     FWCFSGETGEALDTLQHQPGFRPGDAEEEVLGFRLHQLTGELVREWRINELLNHTLVA
                     PDAAGPRGRAILLCHQLAAAAEQGWEHRET"
BASE COUNT          262 a          587 c          514 g          254 t
ORIGIN      
        1 caatgcacgg gaggcggcga aggtggcggc cctctacggc gccggtaccg cggccaaggt
       61 aatcccgcag cctggcgcgg gcgtgggatt cctcgaaggc gagatggatt tggaggtggc
      121 cggcgcgaag cccgacggga tgttgcaact gcgcatcctg cgcgaactct cgtcgctcct
      181 ggagggcaag gccgactcca gcatcgtcat ggaactggtg ctggagggga tctaccgcgg
      241 catcggcatg gaccgcaccc tcttcgccct gctgacgccg gaccggagcg agctgcgcac
      301 caagttcatg ctcggcgcca aacgtgagca actggccgac cacttccact tccgcatggc
      361 gggcgcaacc cacgtcttcg gccaggtgct ggagaagcag gccgccctct gggtggatgc
      421 ccaaatccat cccgagcagg agcggctgct gcccatggag gtagtgagcg tgaccgggcg
      481 catccccttc ttcgtggcgc ccatcgtggt caacgaccgc agcatcggtc tcttctacgc
      541 ggaccgcggc gtcaccggtc gccccctcga cgaagagagt tacgagagct tccgccactt
      601 cgcgcagcag gccagcctgg ggctttccca ccttgccaag cggggtaggc actagcatcg
      661 ccttcgcacc acgggcagga aatccctgcg ccgcggcaaa cagggattct cctatttccc
      721 cgccgcgcgc gctggccgaa gcttttcccg agactggaac aggatgcagt cgacgactgc
      781 atacgggcag gccccgcgcc cctcgccccc gtgcgcgttt ccctccgcgc accgcgtgat
      841 ccccgggcgc gccgcctgtg gcgcacggag ccccatggcc gttgatcccg caacaggtat
      901 cgcttcaagg tcctccctcg cgacctgggt ggaacgcatc tccaccgccg agatgcccat
      961 cttcggccac accgtgcagc agatcgtcgc cgttgccgag gatgacgagg cccccgcccg
     1021 gcgcctcgcg caggtggtgt tgcaggaccc ctccatgacc gcgcgcaccc tgaaactggt
     1081 gaacagcccc ttctacaacc cgcgcgagcg caccatctcc accgtgagcc acgcggtggt
     1141 actgctcggc ttcaacaccg tgcgcgacct ctgtctctcc atcgccctgg tggacgcctt
     1201 catgcagggc acgccccgcg agcgcttcaa ccatgaactg gcccgttcca tccacgccgc
     1261 ggtccaggcc cgcgccctgg cggtgaagat gggtgatgat tcgccggagg aggtcttcat
     1321 cgccgcgctg ctctaccacc tgggcgatct cgccttctgg tgcttcagcg gcgagaccgg
     1381 cgaggcgctc gacacccttc agcaccagcc aggcttccgg cccggcgacg cggaggagga
     1441 ggtgctcggg ttccgcctgc accagctcac cggcgaactg gtgcgcgagt ggcgcatcaa
     1501 cgaactgctg aaccacaccc tggtcgcccc cgatgcggcg ggtccgcgcg gccgcgccat
     1561 cctgctctgc caccaactgg cggcggcggc cgaacaggga tgggagcaca gggagac
//
LOCUS       DATGWW010000657         2026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_397982, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000657 DATGWW010000000
VERSION     DATGWW010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397982"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..455
                     /locus_tag="VK150_09590"
     CDS             <1..455
                     /locus_tag="VK150_09590"
                     /inference="COORDINATES: protein motif:HMM:NF020952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HLP31604.1"
                     /translation="RTKIDSRTILDSGGGEQLLGAGDALFLPNGASHPKRIHAPFLSE
                     EETLRLVTWLRERGRPDYNQALISAMETEEETALFDDAEMAGVDDIYQRAVAVVTRER
                     KASTSLLQRKLNLGYGRAARLIDRMEEEGIVGPDRGAGKPREVFAQAD"
     gene            599..1975
                     /locus_tag="VK150_09595"
     CDS             599..1975
                     /locus_tag="VK150_09595"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HLP31605.1"
                     /translation="MRHAIRTPLLLAASAAALLAVEPQAPKPAAAKICTTCHTTAPDN
                     LRGHFDNLALKNSSFQLKIDERTEVLRFDKATVKVITPDPAADVEAAFKSIAKGHEVR
                     VQFTEKDGVKTAVTVAVKPPVKLAANETITLDEVQKLVAMGPEKGRYFLYDSRPTPRF
                     LEGAIPTAVNLPFPAFDKNLDKLPADKGALVIFYCSGKTCNMSPGSLAKAKKLGYTNA
                     KVFIDGMPAWAKKQPGVLSPAALKAAYLDTNTPLVILDARPAAQAEKGFLKGAVAAEP
                     AKVADLLKTFPAAKLKPPVVVVDETGGEAARTVATDLVKAGYVGVNILTGGFKAWQAA
                     ALPVETGTLAAKAVFVPKPRPGSISAAEFTKIAEAAPADRGAVILDVRNPDETKNGII
                     KGALTIPEPQLLARLSELPKGKPVLCHCSTGIRAELAYHLLKEKGYDVRFLPTEITII
                     DSGEFTID"
BASE COUNT          390 a          772 c          598 g          266 t
ORIGIN      
        1 tgcgcaccaa gatcgacagc cgcaccatcc tcgactccgg cggcggcgag cagctgctgg
       61 gcgccggcga cgccctcttc ctgcccaacg gcgccagcca tcccaagcgc atccatgccc
      121 ccttcctgag cgaagaggag accctgcgac tcgtcacctg gctgcgcgag cgcggacggc
      181 ccgactacaa ccaggccctc atcagcgcca tggagaccga agaggagacc gccctcttcg
      241 acgatgcgga gatggccggg gtggacgaca tctaccagcg tgccgtggct gtggtgaccc
      301 gggagcgcaa ggccagcacc agcctcctgc agcgcaaatt gaacctcggc tacggccgcg
      361 ccgcgcgcct catcgaccgc atggaggaag agggcatcgt gggccccgac cggggcgcgg
      421 gcaagccccg cgaagtcttc gcccaggcgg actgaacggc cagccggagg gccgcctcaa
      481 ccgccccgca cgtggcctga agtcgccact ggagtggccg tagaccgcga tcacatcttt
      541 ctcgacttat aggtaaacaa ccatagactc ctaccgatat ccgatcccag gagcctccat
      601 gagacatgcc atccgaaccc ccctcctgct ggccgcgagc gcggcagccc tcctcgccgt
      661 cgagccacag gccccgaagc ccgccgccgc gaagatctgc accacctgcc acaccacggc
      721 ccccgacaac ctccgcggcc acttcgacaa cctggccctc aagaacagct ccttccagct
      781 gaagatcgac gagcgcaccg aagtgctccg cttcgacaag gccaccgtga aagtcatcac
      841 gcctgatccc gccgccgacg tcgaagcggc cttcaagagc atcgccaaag gccatgaagt
      901 gcgggtgcag ttcaccgaga aggatggcgt aaagaccgcg gtgaccgtgg ccgtgaagcc
      961 tcccgtgaag ctcgccgcaa acgagaccat caccctcgac gaggttcaaa agctcgtggc
     1021 catgggcccg gagaagggcc gctacttcct ctacgactcc cgcccgacgc cgcgcttcct
     1081 ggaaggcgcg attcccacgg ccgtgaacct gcccttcccc gccttcgaca agaacctcga
     1141 caagctgccc gccgacaagg gcgcgctcgt gatcttctac tgcagcggga agacctgcaa
     1201 catgagcccg ggatccctgg ccaaggccaa gaagctcggc tacacgaacg ccaaggtctt
     1261 catcgacggc atgcccgcct gggccaagaa gcagcccggc gtcctgagcc ccgccgccct
     1321 caaggccgcc tacctcgaca cgaacacgcc gctcgtgatc ctcgacgccc ggcccgccgc
     1381 ccaggccgag aagggcttcc tgaagggggc cgtggccgcc gaaccggcca aggtggccga
     1441 cctgctcaag accttccccg ccgccaagct gaagcccccc gtcgtggtgg tggatgagac
     1501 cggcggcgag gccgcccgga ccgtggccac ggacctggtg aaggccggct acgtgggcgt
     1561 gaacatcctg accggcggct tcaaggcctg gcaggccgcc gccctgcccg tggaaaccgg
     1621 caccctggcc gccaaggccg tcttcgtgcc caagccccgg ccaggctcca tctccgcggc
     1681 ggagttcacg aagatcgccg aggcggctcc agcggatcgc ggcgccgtga tcctcgacgt
     1741 gcgcaatccc gacgagacga agaacgggat catcaagggc gccctcacga tccccgagcc
     1801 acagctgctg gcccgtctct ccgagctccc caagggcaag ccggtcctct gtcactgctc
     1861 caccggcatc cgcgccgagc tggcctacca cctgctcaag gagaagggct acgacgtccg
     1921 cttccttccc accgagatca ccatcatcga cagcggcgaa ttcaccatcg actgatccgc
     1981 cgcggcaacg agaaaggggc cggcctcagg gccggcccct tcttca
//
LOCUS       DATGWW010000658         1940 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_398022, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000658 DATGWW010000000
VERSION     DATGWW010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1940
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398022"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /locus_tag="VK150_09600"
     CDS             complement(<1..523)
                     /locus_tag="VK150_09600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31606.1"
                     /translation="MSLEDRPTTIHTREELTPLGPWSFFRSALPGGFTRWGWGLMLGW
                     MLVLLGPALGWAGHLRRAAGWSALPSHWGEQISARDLWELWENGGLQHRLTNSPTVHL
                     FGLGLVIVLWCGWRMQAESAGLKARLAPWLLGALDTVLIGFLPLGSVAWLGDVTLAWA
                     GRLGIDGLGWIAFF"
     gene            759..>1940
                     /locus_tag="VK150_09605"
     CDS             759..>1940
                     /locus_tag="VK150_09605"
                     /inference="COORDINATES: protein motif:HMM:NF012640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HLP31607.1"
                     /translation="MTPQPRHLIRHPLPADLLTPLAAYLALRPAGASLLLESCDQGER
                     VGRHSFVLLEGTGECRLDAPARGWVETLRALAGPGPGESLHDPGAALPPLREALPVGV
                     SCAGYLGFEAMGALEPTLPLPARNSLGLPGLWVRRFDTALVFDHLHQVAELQTLDADP
                     AAGFARLAQLRARLAEGAKDPGPGRSEPAVHPLMARGDFEAAVASAQERILDGDIYQL
                     VPSQRFRVDAPPAPLEAYRRLRRLNPSPYGFLLEWDGFALVGASPEMLARVQGGEAET
                     LPIAGTVPRGANAEEDAARFEALKRDPKELAEHQMLVDLARNDLGRVAVPGGVRVELP
                     LALQRTSHVLHLTTTVKARLKPEVDALDVLAAAFPAGTVSGAPKLRACQRIAELEGEV
                     RG"
BASE COUNT          273 a          718 c          696 g          253 t
ORIGIN      
        1 cgaagaaggc gatccagccg agcccgtcga tgcccaggcg gcccgcccag gcgagggtca
       61 cgtcccccag ccaggccacc gagcccagcg ggaggaaccc gatcagcacg gtgtccaggg
      121 cgccgaggag ccagggggcc agcctggcct tgaggccggc cgattccgcc tgcatgcgcc
      181 agccgcacca gaggacgatc acgaggccca ggccgaagag gtgcaccgtg ggcgagttgg
      241 tcagccggtg ctggagaccg ccgttctccc agagctccca gaggtcccgg gcgctgatct
      301 gctcgcccca atgggagggc agggcgctcc agcccgcggc ccggcgcagg tggccggccc
      361 agcccagggc ggggcccagc agcaccagca tccagccgag catcaggccc cagccccagc
      421 gggtgaagcc gccgggcaag gcagagcgga aaaaggacca gggccccaga ggcgtcagct
      481 cctcccgggt atggatggtg gtggggcgat cctcaaggct catgggcatc cgcaggcaat
      541 ctcccatcaa accacacttg acagctccgg gacggttggg gtttcatcgc ttccatgcag
      601 ctgtccttcc cgacccttcg ccaggggctc ctccacgggg cctattggtg gtggcgtacg
      661 ggctcggacg gctccctgcg cgaggcctag cggccctgcc accccggacc ttccgagccc
      721 gacctcatgg tcgggctttt ttgttgtgga atgacacgat gacccctcag cccaggcacc
      781 tgatccgcca cccgctgccc gcggacctcc tcacccccct cgcggcctat ctggccctcc
      841 gtccagcggg ggcgagcctg ctgctggaat cctgcgacca gggcgaacgg gtgggacgac
      901 acagcttcgt gctgctcgag ggaaccgggg aatgccggct cgacgccccc gcccggggct
      961 gggtggaaac cctccgcgcc cttgccgggc ctgggcccgg cgagagcctc cacgatcccg
     1021 gcgccgcgct gccgcccctg cgggaggcgc tgcccgtggg ggtcagctgc gcgggctacc
     1081 tgggctttga ggccatgggg gccctggagc cgaccttgcc ccttcccgcc cggaacagcc
     1141 tgggcctgcc gggcctctgg gtgcggcgct tcgacacggc cctggtcttc gaccacctgc
     1201 accaggtggc cgagctgcag accctggatg ccgatcctgc cgccgggttc gcgcggctgg
     1261 cccagctgcg ggcgcggctg gcggaggggg cgaaggatcc cggcccgggg cggtccgagc
     1321 cggccgtcca cccgctcatg gcccggggcg acttcgaggc cgccgtggcc tcggcccagg
     1381 agcgcatcct cgacggcgac atctaccagc tggtgcccag ccagcggttc cgggtggacg
     1441 cgccaccagc gccgctcgag gcctaccgcc gcctgcgccg gctcaatccg agcccctacg
     1501 gattcctgct cgagtgggac ggcttcgcgc tggtgggcgc ctcgcccgag atgctggcgc
     1561 gggtccaggg cggggaggcg gagaccctgc ccatcgccgg caccgtgccc cggggcgcga
     1621 acgcggagga ggacgccgcg cgcttcgagg ccctgaagcg cgatcccaag gaattggccg
     1681 agcaccagat gctggtggac ctggcccgga acgatctcgg ccgcgtggcg gtgcccggcg
     1741 gcgtccgggt ggagctgccc ctggcgctgc agcgcaccag ccatgtgctg cacctgacca
     1801 ccacggtgaa agcccggctg aaacccgagg tggatgccct cgacgtgctg gcggcggcct
     1861 ttcccgcggg caccgtcagc ggcgcgccca aactgcgcgc ctgccagcgc atcgccgagc
     1921 tggagggcga agtccggggg
//
LOCUS       DATGWW010000659         1793 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_131416, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000659 DATGWW010000000
VERSION     DATGWW010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131416"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            368..>1793
                     /locus_tag="VK150_09610"
     CDS             368..>1793
                     /locus_tag="VK150_09610"
                     /inference="COORDINATES: protein motif:HMM:NF019874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HLP31608.1"
                     /translation="MSLRGRFQFRTLSGKVLALSLLPVLLFLLFFAFYVLPTLHKAVM
                     RAKQEGVRQVVDLAVTMLQAQEAKVRAGIQPLEATQARAKEVIASLRYDKTNYLWIQG
                     PGPRIIAHPIRPEWDGKPTDDLGDPALAKLFRDLERTALAPDGAIHAYEFPKPGQKGL
                     YPKVSYVRTFEPWGWTVGTGVYVDDVDREVRTIAAVMLGGLLLVSALVFGLARSLSRR
                     MTRPLHHLVEGLQNSDLSRQIQVSAQDEVGQAALAFNRYNGDMRRIVLDVSEFATRVA
                     SGSTELAASAEEMAKAVAEIAQVSEDLKGAGEGVSQALRALGDNAALVATRTQEVEAR
                     SEEVVAETDRSAEAGQGTAQGMADIQQVTGQIVQAVTVIQEIARQTNLLSLNAAIEAA
                     KAGQQGKGFAVVAEEVRKLAERSAVAAREIEGLIQRTQEVVSGGVSSVDTTLASLGTI
                     RDRIGGVARGIQEIGGLSRGQAATG"
BASE COUNT          315 a          591 c          619 g          268 t
ORIGIN      
        1 ggcatgaagg cggtgttcgg cgccccgagg tcgtagtcgc ggagcggatc ccagcgcatg
       61 aagtcccgca tgagccggaa gggttcgagg gtcgcggccg tggccgggac ggtctggggg
      121 ttgcgggtgc gaaggatggt catgatgtcc tccatgaaaa aggggaaggg ttgggaaaac
      181 gatccatcgg gcgcgtccca aggggggatc gcgggggatg aatcaaaatc cgaataaaat
      241 cttagtcaat taccatcacc cgtcaatacc tctccttttt ttccatttca ttccagacaa
      301 acagggtggc taccgatggt aaacatcgag ttgatccacg ccgatgaggg aacatccgga
      361 gggcaccatg agcctgcgcg gccgcttcca gttccgtacc ctctctggca aggtgctggc
      421 cctcagcctg ttgccggtgc tcctcttcct gctgttcttc gccttctatg tgctgccgac
      481 cctccacaag gccgtgatgc gggcgaagca ggagggcgtg cgccaggtcg tggacctggc
      541 cgtgaccatg ctccaggccc aagaagccaa ggtgcgggcg ggcatccagc cccttgaggc
      601 cacccaggcc cgggccaagg aggtcatcgc cagcctccgc tacgacaaga cgaactacct
      661 ctggatccag gggcccgggc cccggatcat cgcccatccc atccgccccg agtgggacgg
      721 gaagcccaca gacgatctgg gagaccccgc cctcgccaag ctgttccgag atctcgagcg
      781 cacggccctg gcccctgatg gcgccatcca tgcctatgag ttccccaaac ccggccagaa
      841 ggggctctat cccaaggtga gctacgtgcg caccttcgaa ccctggggct ggactgtcgg
      901 caccggagtc tacgtcgacg acgtggaccg cgaggtccgc accatcgccg cggtgatgct
      961 gggcgggctg ctgctcgtgt ccgccctcgt cttcggcctg gcgcgcagcc tgtcgcggcg
     1021 catgacccgc cccctccacc acctggtcga ggggctgcag aacagcgacc tgtcccgcca
     1081 gatccaggtg agcgcgcagg atgaggtggg ccaggcggcg ctggccttca accgctacaa
     1141 cggcgacatg cgccgcatcg tcctggacgt ctcggagttc gcgacccggg tggcctcggg
     1201 cagcaccgag ctggccgcct cggccgaaga gatggcgaag gccgtggccg agatcgccca
     1261 ggtgagcgag gacctgaagg gtgccggcga gggcgtgtcc caggccctcc gcgcccttgg
     1321 agacaacgcc gctctggtgg ccacccgcac ccaggaggtg gaggccagga gcgaggaggt
     1381 ggtggcggaa acggatcgca gcgcggaagc cggccagggc acggcccagg gcatggccga
     1441 cattcagcag gtgacgggcc agatcgtcca ggcggtcacc gtcatccagg agatcgcgcg
     1501 gcagaccaac ctgctctccc tgaacgccgc catcgaggcc gccaaggcgg gacagcaggg
     1561 caagggcttc gccgtggtgg ccgaggaggt ccgcaagctc gcggagcgct ccgccgtcgc
     1621 ggcccgcgag atcgagggac tcatccagcg cacccaggag gtggtctccg ggggggtgag
     1681 cagcgtcgat acgaccctgg ccagcctggg taccatccgg gatcgcatcg gcggcgtggc
     1741 ccggggcatc caggagatcg gcgggctctc ccggggccag gccgccacgg gac
//
LOCUS       DATGWW010000660         2338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_213176, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000660 DATGWW010000000
VERSION     DATGWW010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213176"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2338
                     /locus_tag="VK150_09615"
     CDS             <1..>2338
                     /locus_tag="VK150_09615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31609.1"
                     /translation="KPAASTRTVDPRPTAKGEAAEAFLDQCLAERPRAGIAPLRATIL
                     TLPDPQRTHMAFWFDLRLNAVQRAFKQDGFLPRAFFLPWEASPKEDAGQGVSSRYPVG
                     SPGLIWFARERRATDPQGGPTAYHALFIVGESQALGLNREAMRQALRLAAKAQGAGVE
                     PAPTGPITFIGPQFSGSLTSLGAALEEHFRTAAALPVRVQGTTTLDAAAAETLRATAG
                     GVPAPRLSISSWICNLSGASKEQLLSWYRQEAGWPKEASKVAIFTESNTVYSPGSPAA
                     VGPGTGLGGPVTTIYFPMGLSRLRAERRAMEHSLAKGSQSMELVLPSTLLGPSEDDAL
                     RVLDTLPQYSADSLRDAELTLAGTVLSLARRGYTHIGISASDPQDLIFLAERIRAYHP
                     SCTLFTTSGNHTLFAHPNFSAAMDGMILIGGYPLTDAVRVLSLKKGELESPVRFNSEG
                     EYAAYYATLLALDPARAKDLDRRFWGKQGFISIVKGGNIWPLRHGGIEVTTPSGAIQW
                     DRQLEGAYLEVGKQSTDLAEYVHSRLLQLSVLLLLLGGMSFWIFLRPLIDLAAAGPRD
                     AQAGPSLNPYRDLATGALLVLAVLTLMGVAYLLPLLVLTLPPGGNTFLWISLAAWGMV
                     LLLTTRALQAQWGWARALPLVAAALAPALAVGGWARWHFLVFVPGYLRFTSPGRGVSL
                     LPTLLFLTAALALLLRTWFDVRRQEHAAFWPVPIGLASVPGRHLEAFRGLHARWWIFL
                     FVLGLLALHRLLPGGLFRPLLEVQGIAAIVLGVGGCVFV"
BASE COUNT          302 a          908 c          746 g          382 t
ORIGIN      
        1 aagccggccg cctcgaccag gaccgtcgat ccgcggccca cggcgaaagg cgaagcggca
       61 gaggccttcc tggatcaatg cctggctgaa cggccccgtg caggcatcgc tccgctgcgc
      121 gccaccatcc tcaccctgcc cgatccccag cgcacccaca tggccttctg gttcgacctt
      181 cgcctgaacg cggtgcagcg cgccttcaaa caggatggct tcctgccccg ggccttcttc
      241 cttccctggg aggccagccc gaaggaggac gcgggccagg gagtttcctc ccgctatccg
      301 gtgggcagcc ccggcctcat ctggttcgcg cgggagcgcc gggccacgga tccccagggc
      361 gggccgacgg cctaccacgc gctcttcatc gtgggcgaga gccaggccct gggcctcaac
      421 cgcgaggcca tgcggcaggc cctccgcctg gcggccaagg cgcagggcgc cggagtcgag
      481 cccgcgccaa cgggccccat caccttcatc ggtccccagt tctccggcag cctcacctcc
      541 ttgggcgcag cgctggagga gcatttccgg accgccgccg cgctgcccgt ccgcgtgcag
      601 ggcaccacca cgctcgacgc ggccgccgcg gaaaccctgc gcgccaccgc cggcggcgtg
      661 cccgcgccgc gcctctcgat ctccagctgg atctgcaacc tctccggcgc ctcgaaggaa
      721 cagctcctga gttggtaccg gcaggaagcc ggctggccca aggaggcctc caaggtggcg
      781 atcttcaccg aatccaacac ggtctacagc ccgggcagcc cggccgcggt cggccccggc
      841 acggggctcg gcggaccggt caccacgatc tacttcccca tgggcctgtc gcgcctgcgc
      901 gccgagcgga gggccatgga acacagcctg gcgaagggtt cccagagcat ggagctggtg
      961 ctgccttcga ccctgctggg tccctccgag gatgacgccc tgcgggtgct cgacaccctg
     1021 ccccagtatt ccgccgactc gctccgcgat gcggagctga ccctggccgg caccgtgctc
     1081 agcctcgccc ggcggggcta cacccacatc gggatttccg cctcggatcc ccaggacctg
     1141 atttttctcg cggagcgcat ccgcgcctac caccccagct gcacgctgtt cacgaccagc
     1201 ggcaaccaca ccctgttcgc tcacccgaat ttcagcgccg ccatggacgg catgatcctc
     1261 atcgggggct acccgctcac ggacgccgtg cgggtgctct ccctgaagaa gggcgaactg
     1321 gaatccccgg tgcgcttcaa ttcggaaggc gagtacgcgg cctactacgc caccctgctg
     1381 gccctggacc cggcccgcgc caaggacctc gaccgccggt tctggggcaa gcagggcttc
     1441 atctccatcg tgaagggcgg caacatctgg cccctccgcc acggaggcat cgaagtgacc
     1501 accccgtccg gcgccatcca gtgggatcgc cagcttgagg gcgcctacct ggaggtgggg
     1561 aagcagagta ctgacctggc ggaatacgtc cattcgcggc tgctgcagct cagcgtactg
     1621 ctgctcctgc tcggcggcat gtccttctgg atcttcctca ggccgctcat cgaccttgcc
     1681 gcggccggcc cccgggatgc ccaggcggga ccgagcctga acccctaccg cgacctcgcc
     1741 accggcgcgc tgctggtgct ggccgtgctg acgctcatgg gcgtcgccta cctgctgccc
     1801 ctcctcgtgc tgaccctgcc cccgggcggc aacaccttcc tgtggatcag cctcgcggcc
     1861 tggggcatgg tgctgctgct cacgacccgg gccctccagg cccagtgggg ctgggcccgc
     1921 gccctgcccc tggtggccgc ggcgctggcg ccggccctgg cggtgggcgg ctgggcccgg
     1981 tggcacttcc tcgtcttcgt gcccgggtac ctccggttca cctctccggg acgcggggtc
     2041 tcgctccttc ccaccctgct cttcctgacg gccgccctgg ccctgctgct gcggacctgg
     2101 ttcgacgtgc gccgccagga acatgctgcc ttctggcccg ttcccatcgg actggcctcg
     2161 gtgccgggcc gccacctgga agccttccgc gggctccacg cccggtggtg gatcttcctg
     2221 ttcgtcctcg gcctgctggc gctgcaccgg cttctgcccg gcggcctgtt ccggcctctc
     2281 ctggaagtgc agggcatcgc cgccatcgtc ctgggcgtgg gtggctgcgt gttcgtgg
//
LOCUS       DATGWW010000661         2325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_398166, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000661 DATGWW010000000
VERSION     DATGWW010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398166"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..552
                     /locus_tag="VK150_09620"
     CDS             <1..552
                     /locus_tag="VK150_09620"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLP31610.1"
                     /translation="FREDLYYRLSIFHMTLPPLRDRRSSIPGLIRTFVKKYGAQSKKE
                     IHGIARSAEAALLNYDYPGNIRQLENIIEHAVALCEGENIVLEDLPEYLVRPAGAAGP
                     QLLYALPKAEEAPAAQDPETLMTLAELEKSYIRKALEVCNRNHTEAARRLGISRSTLW
                     RKLKEHGMEEGAPAASPESAPAR"
     gene            761..>2325
                     /locus_tag="VK150_09625"
     CDS             761..>2325
                     /locus_tag="VK150_09625"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HLP31611.1"
                     /translation="MPVSRFLKITFALVGGLALLLGGCRSGVTDGDASEDDQTTLAVG
                     LATPPPQFSDVVVGQGYNTPMSIAFDPDGRLYVVEKGGTIKMVGQNTPVLLPSQLPGL
                     NQGGERGLLSIAFDPAWANPAERWMYVHWSHTSNNKISRVLISTSAPYVALGDPQDVF
                     NLSTLSSTSFGHNGGPMHFGPDGTLFITTGDNGVGVNAQNTGNLIGKLLRINKDGSIP
                     AGNPFGNAIWAYGLRNPFTFDIQPGTGRIFINDIGQDAFEEVNETSTFGGGQNFGWPN
                     SEGPTSIPGHANPRISYVNGAGAWGEDCAVTGAAFYNPSGPAAYPASYVGDYFYADLC
                     SGYIKGYDLATSTSYTFATGVEMITDLRLGPDGALYYLVYRVTSPNGDLPGYVGRIAY
                     TGTNAPSISRQPVSATLPVGGSHTFTVGALGGGLSYQWQRNGADIPGANDPSYTVSNV
                     QTWDDNAQFRCRITNSFGTATSDAAVLSITSNRAPTAIITSPANNTSYTAGSSFTFTG
                     IGTDPEQGDLPASA"
BASE COUNT          446 a          878 c          600 g          401 t
ORIGIN      
        1 ttccgggagg atctctacta ccggctcagc atcttccaca tgaccctgcc gccgctgcgc
       61 gaccgccgca gctcgatccc cggcctcatc cgcaccttcg tcaagaagta cggggcccag
      121 agcaagaagg agatccacgg catcgccagg tccgccgagg cagccctgct gaactacgac
      181 taccccggca atatccgcca gctcgagaat atcatcgagc acgcggtggc cctgtgcgaa
      241 ggagagaaca tcgtcctcga ggatctgccg gaatacctgg tgaggcccgc cggcgcggcc
      301 ggcccccagc ttctgtacgc cctgcccaag gcggaagagg cccccgcggc ccaggatcct
      361 gaaaccctga tgaccctggc cgagttggag aagtcctata tccgcaaggc cctggaggtc
      421 tgcaaccgca accataccga ggccgcccgc cgcctcggca tctcccgctc caccctctgg
      481 cgcaagctca aggagcacgg gatggaggaa ggcgctcccg ccgcctcccc tgaatcggcc
      541 ccggcgcgct gatccatacc tccgtttttc cgaaaattct caccatccat tgtagaggat
      601 tggggtcaaa accgccccag ccaattattt gtccaaaggc ataccgtccg aacaataaat
      661 ctatctctct cccattcctg gaggtcttca tcaagaagcc tccagatgca gacggacctt
      721 cacgaaagga catcccatgt cattcgcatc cggcaggacc atgccggttt cccgcttttt
      781 gaaaatcaca ttcgccctgg tgggcggcct ggccctcctg cttggcggtt gccgctccgg
      841 cgtcaccgat ggggatgctt cagaggacga tcaaaccacc ctcgccgtcg gcctggccac
      901 ccctccgccc cagttctccg acgtggtggt aggccagggt tacaacactc ccatgtccat
      961 tgccttcgat cccgatggac ggctctacgt ggtggagaag gggggcacca tcaagatggt
     1021 gggccagaac accccggtcc tacttccctc ccagctcccg ggcctcaacc agggcggcga
     1081 gcggggcctc ttgtccatcg ccttcgatcc cgcctgggcg aatcccgccg agcgctggat
     1141 gtacgtgcac tggagccata cctcgaacaa caaaatcagc cgcgtcctga tttccacgtc
     1201 cgcgccctat gtcgccctcg gcgacccgca ggacgtattc aacctctcca ccctgtcttc
     1261 cacttccttc gggcataacg gcgggcccat gcacttcggc cccgacggca ccctgttcat
     1321 caccaccggc gacaacgggg tcggcgtcaa cgcccagaac accggcaacc tgatcggcaa
     1381 gctgctgcgc atcaacaagg acggcagcat cccggccggc aaccccttcg gcaatgccat
     1441 ctgggcctac ggactccgca atccctttac cttcgacatc cagcccggca cgggccgcat
     1501 cttcatcaac gacatcggcc aggacgcctt cgaagaggtc aacgaaacct ctaccttcgg
     1561 cggaggccag aacttcggct ggccgaattc ggaaggcccc accagcatcc ccggccatgc
     1621 caatccgcgc atcagctacg tgaacggcgc gggagcctgg ggcgaagact gtgccgtgac
     1681 cggcgcggcc ttctacaatc cctccggccc cgcggcctat cccgcctcct acgtgggcga
     1741 ctacttctac gccgaccttt gcagcggata tatcaaggga tatgacctgg ccaccagcac
     1801 ctcctacacc ttcgccaccg gcgtggagat gatcacggac ctccgcctgg ggcccgatgg
     1861 cgccctttat tatctggtct atcgcgtgac ctcccctaat ggtgatctgc cgggctacgt
     1921 gggtagaatc gcctacaccg gcaccaacgc gccgtccatc tcccgccaac ccgtctccgc
     1981 gacccttccc gtgggcggct cccacacctt caccgtggga gccctgggag gcggcctctc
     2041 ctatcagtgg cagcgcaacg gcgcggacat ccccggcgcg aatgacccat cctacaccgt
     2101 atccaatgtc cagacctggg acgacaacgc ccaattccgc tgccgaatca ccaattcctt
     2161 cggcaccgcc accagcgatg ccgccgtgct ttccatcacc tccaaccgcg cccccaccgc
     2221 catcatcacc agtccggcca acaacacatc atacaccgcc ggcagctcct tcaccttcac
     2281 cggcatcggc accgatccgg agcagggcga ccttcccgcc tccgc
//
LOCUS       DATGWW010000662         1804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_213422, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000662 DATGWW010000000
VERSION     DATGWW010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213422"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1231)
                     /locus_tag="VK150_09630"
     CDS             complement(<1..1231)
                     /locus_tag="VK150_09630"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HLP31612.1"
                     /translation="MLQTLLDSLRRGWAAFRFRRHWPWVLLVGGLLLLAAPTGSGCAA
                     LLAWIGGLWLLVRALRWIWNRLLFRVSRRLWVILGLMSVLPVAALGLMLLAFSWLGLG
                     AQVSRSTQQTLAAWEEALKTASLEPTDAAALQALRTFGGAWVEHVRSLPGGVPETFTG
                     MVWADSHDAGPEAPRKDTYLRAVRKEPGGYRILSLNLGILGDRAQALAGGQVVFQLSP
                     RKQGRKGEDTVRFQTRDRGTTKEAPVLVGQRQVLATWTKGLPLQGSGLFAPFNLPPLA
                     FTITDWSSGQEMVLTATPETNLYALFAGYRSGDRQAMSEGTVKAIVIVSLVLLALVLA
                     QALAAILGLVLAWSLGRAVNDLHHGVQRLSDGDFTTRIRPRGRDQVAQLATAFNEMAA
                     RLLTAAAERDERLRMEEE"
     gene            complement(1239..>1804)
                     /gene="fabG"
                     /locus_tag="VK150_09635"
     CDS             complement(1239..>1804)
                     /gene="fabG"
                     /locus_tag="VK150_09635"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: protein motif:HMM:NF009466.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HLP31613.1"
                     /translation="ADLSDGASVKAAVATTVERHGAIHILVNNAGITRDKLLIQMKEE
                     DWDAVIDTNLKGAWTAIQAVTKPMMKQRWGRIINIASVVGQMGNAGQANYVAAKAGLI
                     GLTKSVARELASRNVTSNAVTPGYIETAMTAGLSDEVKAEFTKQIPLGRMGTGADIAA
                     SVAFLASEEAGYITGQVLSVNGGMLMP"
BASE COUNT          258 a          641 c          645 g          260 t
ORIGIN      
        1 gctcttcttc catccgcagg cgctcgtccc gctcggccgc ggccgtcagc aggcgcgcgg
       61 ccatctcgtt gaaggccgtc gccagctggg cgacctggtc ccgtccccgg ggccggatgc
      121 gggtggtgaa atccccatcg ctcaggcgct gcaccccgtg gtgcaggtca ttgaccgcgc
      181 gccccaggga ccaggccagc accaggccca ggatggcggc cagggcctgg gccaggacca
      241 gggccagcag cacgaggctg acgatcacga tggccttcac ggtgccttcg gacatggcct
      301 gccggtcgcc ggagcggtag cccgcgaaga gcgcatagag gttcgtctcc ggcgtggcgg
      361 tcagcaccat ctcctggccg ctggaccaat ccgtgatcgt gaaggcgagc gggggcaggt
      421 tgaagggcgc gaacagcccg ctgccctgga gggggagccc cttggtccag gtcgcgagga
      481 cctgccgctg gcccacgagg accggcgcct ccttcgtggt gccgcggtcg cgggtctgga
      541 accggaccgt gtcctccccc ttccgcccct gcttccgggg cgacagctgg aacaccacct
      601 ggccgccggc gagggcctgg gcccggtcgc cgaggatgcc gaggttgagc gacagaatgc
      661 ggtacccgcc cggttccttg cgcaccgccc gcaggtaggt gtccttccgc ggcgcctccg
      721 ggcccgcgtc gtggctgtcg gcccagacca tgcccgtgaa ggtctcggga acgcctccgg
      781 gaagggaccg cacgtgctcc acccaggcgc cgccgaaggt gcgcagggcc tgcagcgccg
      841 ccgcgtccgt gggctccagg ctggcagtct tgagcgcctc ctcccaggcc gccagcgtct
      901 gctgggtgga gcggctcacc tgcgccccga gtcccagcca gctgaaggcc agcagcataa
      961 ggcccagagc cgccaccggc agcacggaca tcaggccgag gatcacccag aggcggcgcg
     1021 atacgcggaa gagcagccgg ttccagatcc agcggagggc ccgcaccagc agccacaggc
     1081 cgccgatcca ggccagcagc gcggcgcagc ccgagcccgt gggggccgcc aagagcagca
     1141 ggccgcccac caggagcacc cagggccagt ggcggcggaa ccggaaggcg gcccatccgc
     1201 gtcggagcga atccagcagg gtctggagca tggccgcctc agggcatcag catgccgccg
     1261 ttgacgctca gcacctgccc cgtgatgtag cccgcctcct cgctggccag gaaggccacg
     1321 gaggcggcga tgtcggcgcc cgtgcccatg cggccgaggg ggatctgctt ggtgaactcg
     1381 gccttcacct cgtcggaaag gcccgcggtc atggccgtct cgatgtagcc cggcgtcacg
     1441 gcgttcgagg tgacgttgcg gctggccagt tcccgcgcca cggacttggt gaggccgatg
     1501 aggccggcct tcgccgccac gtagttggcc tgccccgcgt tgcccatctg tcccaccacg
     1561 gaggcgatgt tgatgatgcg gccccagcgc tgcttcatca tgggcttggt gacggcctgg
     1621 atggcggtcc aggcgccctt gaggttggtg tcgatcaccg cgtcccagtc ctcctccttc
     1681 atctggatga gcagcttgtc gcgggtgatg ccggcattgt tcaccaggat gtggatggcc
     1741 ccgtggcgct cgacggtcgt ggccacggcg gccttcacgg aggcgccgtc ggagaggtcg
     1801 gccg
//
LOCUS       DATGWW010000663         1926 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_132145, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000663 DATGWW010000000
VERSION     DATGWW010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1926
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132145"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..693)
                     /gene="rsmI"
                     /locus_tag="VK150_09640"
     CDS             complement(<1..693)
                     /gene="rsmI"
                     /locus_tag="VK150_09640"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: protein motif:HMM:TIGR00096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HLP31614.1"
                     /translation="MKSGRLYVVATPIGNLADWSPRAREVLESVDLIAAEDTRHSGVL
                     LKHFGIDRPLLALHEHNERDVVPELVARMAAGARVAQISDAGTPLVSDPGFHLVRAAQ
                     EAGITVVPVPGPSAVLAALAAAGLPTDRFVFEGFLPPKEGARRQRLEAMKDEPRTQVY
                     FEAPHRVEETLGDLVRVFGADREAVVARELTKTFETIRRGTLAELAAWVAEDANQRRG
                     EIVLVVAGAPARP"
     gene            769..>1926
                     /locus_tag="VK150_09645"
     CDS             769..>1926
                     /locus_tag="VK150_09645"
                     /inference="COORDINATES: protein motif:HMM:NF016251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HLP31615.1"
                     /translation="MRLLFRLLPLVLLLAACATPPRGPITAPTAPYVTEGEAAPAYSA
                     LAGGDYARSAALFRELAAQAKPPKLQEYQLGEAEALLLNEQLPEAAEILGKVRSQGMD
                     PRDLSRLPLLQARLALKKRDAEGALAVLSRGAEPSEPALIAEYHYLRAQAFAQMGNPV
                     ESAREFTLREPFLSDPGTITANQRSIYEALSQASDSTLQSVQLPPPPDLFGGWVELAR
                     IAKSMQAGAELENQLALWRQKYPSHPAQDEIFATLREHAARVTEVPSRVALLLPLTGN
                     LHDAANAVRDGVLAAHYASARNTHVVLRTYDTGTEPKGAVDAYDQAVREGAQFVIGPL
                     RKEDVEAIARHGSLPVPVLALNSLDSGWAPTGLYQFGLAPEDEARQVAERAW"
BASE COUNT          305 a          738 c          605 g          278 t
ORIGIN      
        1 cggccgggca ggcgcgccgg ccaccaccag cacgatctcg ccgcgccgct gattggcatc
       61 ctccgccacc caggcggcca gttcggcgag ggtgccgcga cggatggttt cgaaggtctt
      121 ggtcagctcg cgcgccacca cggcctctcg gtcggccccg aacacccgaa ccaggtcgcc
      181 cagggtctcc tccacgcggt ggggcgcctc gaaatagacc tgggtccggg gctcgtcctt
      241 catggcctcc aggcgctggc gcctggcccc ttccttcggc ggaaggaagc cctcgaagac
      301 aaagcgatcg gtggggaggc ccgccgccgc cagggcggcc agcacggcac tgggaccggg
      361 caccggcacc accgtgatcc ccgcctcctg ggccgcacgc accagatgaa agccggggtc
      421 ggaaaccagg ggcgtgcccg cgtcggagat ctgggccacc cgtgcccccg ccgccatgcg
      481 cgccaccagt tccggaacca cgtcacgttc gttgtgttca tgcagcgcca gcaacggccg
      541 atcgatgccg aagtgcttga gcagcacgcc gctgtggcgc gtatcctcgg ccgcgatcag
      601 gtccaccgat tccagcacct cgcgcgcccg cgggctccag tcggccagat tcccgatagg
      661 cgtggccact acgtacagcc gccccgattt cattgacacg tgctatcccc gaccagatac
      721 tttgcaattc ccgagaccta tcatacccgg tcaggacctt attcccccat gcgcctcctg
      781 ttccgtctcc ttcccctggt cctcctgctc gcagcctgcg ccacgccgcc caggggtccg
      841 atcacggccc cgaccgcgcc ctacgtcact gaaggcgagg cagcgcccgc ctactcggcc
      901 ctggccggcg gcgattacgc gcgttcagcc gccctgttcc gcgaactggc ggcccaggcg
      961 aagccgccca agctgcagga gtatcaactc ggcgaggccg aggcgttgct cctcaacgag
     1021 cagctcccgg aagcggccga gatcctcggc aaggtgcgga gccaaggcat ggacccgcgc
     1081 gacctctccc gcctgccctt gctccaggcg cgactggcgc tgaagaagcg cgatgccgaa
     1141 ggggccctcg cggtcctgtc acgcggcgcc gagccctccg agcccgccct gatcgccgag
     1201 taccactacc tgcgggcgca ggccttcgcc caaatgggca accctgtgga atctgcccgc
     1261 gaattcacgc tgcgggagcc cttcctttcc gacccgggca ccatcaccgc caaccagcgt
     1321 tccatctatg aggcgctgtc gcaggcctcc gactccacgc tccagtcggt gcagctcccg
     1381 ccgccgcccg atctcttcgg cggctgggtg gaactggcgc gcatcgccaa gtccatgcag
     1441 gccggcgcgg aactggagaa ccagctggcg ctatggcgcc agaaataccc gagccatccg
     1501 gcccaggatg agatcttcgc caccctgcgg gaacacgcgg cccgggtgac ggaagtgccg
     1561 tcgcgggtgg ccctgctgct gcccctcacc ggcaacctgc acgacgccgc caatgcggtg
     1621 cgcgacggcg tactggctgc ccactacgcc agcgcccgca acacccacgt ggtgctgcgc
     1681 acctatgaca cgggcacgga acccaaaggt gccgtggacg cctacgacca agcggtacgg
     1741 gaaggggcgc agttcgtcat cggtcccctg cgcaaggagg acgtggaagc gatcgcccgc
     1801 cacgggtcgt tgccggtacc ggtgctcgcg ctcaacagcc tcgattccgg ctgggcgccg
     1861 accggcctgt accagttcgg cctcgccccc gaagacgagg cccgccaggt ggccgagcgc
     1921 gcctgg
//
LOCUS       DATGWW010000664         7034 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_214118, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000664 DATGWW010000000
VERSION     DATGWW010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 7034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7034
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214118"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..1148)
                     /locus_tag="VK150_09650"
     CDS             complement(81..1148)
                     /locus_tag="VK150_09650"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLP31616.1"
                     /translation="MDAQGAAEAQDGQLADVNSDLQNRGLEASLVIDRATASRLGVTP
                     QAIDSTLYDAFGQRFVSTIYTSLNQYHVVMEVDSPFMQTPDGLQHTYVRATTGSMVPL
                     SAFTRLERRNTALSVNHQGQLPSVTLSFNLPVGVALGDAVTAIDKAQDEIRMPGTLRG
                     SYMGTAQAFKASLSNQPLLVVAALLVVYIVLGMLYESLIHPLTILSTLPSAGVGALLA
                     LLAFRTELSVIAFIGIILLIGIVKKNAILMIDFAIEVERREGLTPEKAIFQACLLRFR
                     PITMTTMAALLGGLPLAVGMGTGSELRQPLGIAIVGGLLFSQLLTLYTTPVIYLYMDR
                     ARLRWARFRASRRAVALLPEN"
     gene            complement(1121..3169)
                     /locus_tag="VK150_09655"
                     /pseudo
     CDS             complement(1121..3169)
                     /locus_tag="VK150_09655"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
     gene            complement(3207..6326)
                     /locus_tag="VK150_09660"
     CDS             complement(3207..6326)
                     /locus_tag="VK150_09660"
                     /inference="COORDINATES: protein motif:HMM:NF007798.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MdtB/MuxB family multidrug efflux RND
                     transporter permease subunit"
                     /protein_id="HLP31617.1"
                     /translation="MNPSRPFILRPIATSLLMVGLLLVGLLAFRQLPVSALPQVDYPT
                     IQVVTFYPGASPDVMASAITAPLERQFGQLPGLNRMSSTSSGGSSVITLQFVLDLNID
                     VAEQQVQAAVNAAGTYLPRDLPNPPIYSKINPADAPILTLALTSKTLPLSKVQDFADT
                     RLAQKISQLPGVGLVSISGGQKPAVRIQASPSALAAKGLTLGDVRTAVAQSNVNQAKG
                     SFDGLRQAYAIGANDQLLSSEEYRPLVVAYRNGAPVLLSEVALVTDDVENIRLAAWKN
                     TTPAVILNIQRQPGANIIAVVDRVKDLLPQLRASLPASVELNILTDRTVTIRASVHDV
                     EFELMLTIALVVMVIFLFLRTLAATIIPSVAVPLSLVGTFGVMYLLGYSLNNLTLMAL
                     TISTGFVVDDAIVMIENIMRYIEEGEPPLQAALKGSGQIGFTILSLTVSLIAVLIPLL
                     FMGDIVGRLFREFAVTLSVTILVSAVVSLTLTPMMCAKLLKHTPPEEQGRFYQSSERV
                     FQRVIAFYGRTLAWVLKHQTGTLVVAVATLASTVLLYLVIPKGFFPVQDTGVILGISE
                     APQTVSFPAMAERQQRLSAEILKDPAVESLSSFIGIDGTNTTLNSGRIQINLKPLEER
                     GLSASEVIHRLQPQLAKVEGIRLYMQPVQDLTVEDRVSRTQYQYTLEDADPRELAEWT
                     PRFVERLAAIPELRDVASDQQNAGLQIRISLDRTTASRLGITPQMLDDALYDAFGQRQ
                     ISTMFTQLNQYRVVLEAQPGQYRQPGDLQNIYVRSASGGSVPLSAFTRIETVTAPLAI
                     NHQGQFPTATVSFNLAPGASLGDAVKAVNQARRDLDLPPSIKAGFQGTAQAFGASLTN
                     TPLLILAAVLTVYILLGVLYESYIHPVTILSTLPSAGVGALLSLMLCRTDFSVIALIG
                     IILLIGIVEKNAIMMIDFALEAERKDGLPPEEAIYQASLLRFRPIIMTTMAALLGGVP
                     LALGSGVGAELRRPLGIVIVGGLIFSQVLTLYTTPVIYLAFDRLARRLRGLGSAPSPA
                     GPTLAPEPE"
     gene            complement(6331..>7034)
                     /locus_tag="VK150_09665"
     CDS             complement(6331..>7034)
                     /locus_tag="VK150_09665"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HLP31618.1"
                     /translation="DTQTTSVAQFEAALKADQAAVESARLNLTYSRITAPISGRVGLR
                     LVDAGNMVRASDANGLATIAPIQPINVVFAVPADSIQRVMSQNAKGGRLPVEAWDRDL
                     RTRLASGALAAIDNQVDPATGTVRMKAIFANDDRALFPNQFVNAQLLVDTLKGVVIIP
                     TAAVQRSPQGAFVYVVKEDSTVDLRAIEVLGTDGDDSAVKQGLSGGELVVTDGLEKLR
                     PGSKVILPKPAGAKG"
BASE COUNT         1155 a         2095 c         2676 g         1108 t
ORIGIN      
        1 ccaccttcag gcccagggaa acggcccgcg ggcctgatcg gggtggttca gaggaccagc
       61 cgctcgacgt catgaaggcg tcaattctcg gggagcaggg ccacggcccg ccgggaggcc
      121 cggaaccgcg cccaccgcag ccgcgcccgg tccatgtaga ggtagatcac gggcgtggtg
      181 tagagggtca gcagctggct gaagaggaga ccgcccacga tggcgatgcc caggggctgg
      241 cgcagctccg agcccgtgcc catgcccacg gccaggggca ggccccccag cagggcggcc
      301 atggtggtca tggtgatggg gcggaaacgc aggaggcagg cctggaagat ggccttttcg
      361 ggcgtgaggc cctcgcggcg ctccacctcg atggcgaagt cgatcatgag gatggcgttc
      421 ttcttcacga tgccgatgag caggatgatg ccgatgaagg cgatgacgct cagctcggtg
      481 cggaaggcca gcagggccag cagggcgccc acgcctgcgg aaggcagggt ggagaggatc
      541 gtcagcgggt ggatgaggct ctcgtacagc atgcccagca cgatgtagac caccagcagg
      601 gccgcgacca ccagcagggg ctggttggac agcgaagcct tgaaggcctg ggccgtgccc
      661 atgtagctgc cccggagggt gcccggcatg cggatctcgt cctgggcctt gtcgatggcc
      721 gtcacggcat cgcccagggc cacgcccacg gggaggttga aggagagggt gacggagggc
      781 agctgcccct ggtggttcac ggagagggcc gtgtttcgcc gctcgaggcg ggtgaaggcg
      841 ctgaggggca ccatgctccc cgtggtggcg cggacgtaag tgtgctgcag gccgtcgggc
      901 gtctgcatga agggcgaatc cacctccatg acgacgtggt actggttcag cgaggtgtag
      961 atggtggaca caaagcgctg gccgaaggcg tcgtacagcg tgctgtcgat ggcctggggc
     1021 gtgacgccca agcgggaggc ggtggcgcgg tcgatgacca gcgaggcttc caggccccgg
     1081 ttctgcaggt ccgagttgac gtcggccagc tgaccgtctt gagcttctgc agcaccttgg
     1141 gcgtccattc gaacagctcc cgggcgtcgt ctccctggag cgtgtactgg tactgggagc
     1201 tggagggacg gccgccgagg cggaggtcct gcacgggctg catgaagagg gtgccgccgg
     1261 cgatgtgggc ggtcttgccc cgcaggcgcc cgatgatctg gtccgcggtg gccttgcgct
     1321 ggtcgttggg cttgagcgag gcgaacatgc ggcccgtgtt gccgccgccg atgaaggccg
     1381 tgacgctctc gacgtcgggg tctgcctgca cgatcgccac gtattccgtc atgagctttt
     1441 ccatgccggc gaaggagatg tcctgggccg cctggatgga gccggtgacg cggcccgtgt
     1501 cctgctgagg gaagaacccc ttggggatga cgatgtagag cgcgatggtg gcgaccatgg
     1561 tgcccagggc cacggtcagg gtgaaccgct ggtgtcggag cacccaggcc agggagcgct
     1621 cgtagtggcc catgatccac tggaagccgc gctcggtggc ctggaagact cggccatgct
     1681 tctcctcggc gtggggccgc aggaggcgag agcacatcat gggcgtggtg gtgagcgaga
     1741 ccagcatgga aatgacgatg gccaccgaga gggtgaccgc gaactcgcgg aagagccgac
     1801 ccacgatgcc gcccatgagc aggatcggga tgaagacggc gatgagcgag atgctgatcg
     1861 acaccaccgt gaagccgatc tccttggcgc cgtggagcgc ggcctccatg ggccgcatcc
     1921 cattctccag gtgccgggtg atgttctcca ccaccacaat ggcgtcgtcc accacgaagc
     1981 ccgtggccac cgtgagggcc atcagggaga ggttgtcgat ggtgtagcca agcaggtaca
     2041 tcacgccgaa ggtgccgatg agcgaaatgg gcacggccac gctggggatg agggtggacc
     2101 gcacgctgcg caggaacacg aagacgacga ggatcaccag gccgatggag atgcccagcg
     2161 ccagctgcac atccttcacc gaagcacgga tggtgcgggt ggcgtcgatg agcactttca
     2221 ggtccatggt gggcgggatg gaggcctgca gctggggcag gatggcccga acccggtcca
     2281 ccgtctcgat gatgtttgcg tccggctgcc ggaagatggg cacgatgatg gccggcacgc
     2341 cgttggacag cccgccgttg cgcacgttct ccaccgaatc ggtgaccttg gccacgtcgg
     2401 agaggcggat ggcgttcccc tggcggtacc gcaggatcag gggctggtag tccgccgcct
     2461 tcatgagctg gtcggtggtg gtgatggacc aggtggtgcc gccactgtcg aggtcgccct
     2521 tgggccggtt caggttggcg gcggcgatgg ccacccgcac atcctcgagg gccaggccct
     2581 gggcattcag cagggccggg ttcacgtcca cccgcacggc cggcagggcg ccgccccaca
     2641 caaacacctg gcccacgccc tggatctggg agagcttctg ctgcagcacc gaggaggcaa
     2701 tgtcgtacat ccgctcccgg ggaatcagtt tcgaggtgag cgccagcagc atgatgggcg
     2761 aatccgccgg attcaccttg cggtaggagg ggttattcgg caggttcgcg ggcaggtcgc
     2821 cccgggcggc gttgatggcg gcctggacgt cgcggcccgc ggcatcgatg ttgcggccca
     2881 ggtcgaactg cagggtgatg ctcgtgccgc ccagtgagct ggccgaggtc atctccgtga
     2941 tgccggcgat gcgcccgaac tgccgctcca ggggcgtggc cacggacgag gccatggtct
     3001 ccgggctggc gccggggagg cccgcctgca cctggatggt ggggaactcc acctggggca
     3061 gcggcgagac cggcaggaac tggtatgcga tggcgcccag cagcgccagg gccacggtca
     3121 gcagcgtggt ggccacgggg cggcggatga agggcgtgga gatgctcacg gggcgccccc
     3181 tacgccaggt gcaccagtcc gcgggctcat tccggctccg gggccagcgt ggggcccgcc
     3241 ggcgaaggcg cggacccgag cccgcgcagc cgccgcgcca gacgatcgaa ggccaggtag
     3301 atcacgggcg tggtgtagag ggtcagcacc tggctgaaga tgaggccgcc cacgatgacg
     3361 atgccgaggg gccgccgcag ctcagcgccc acgcccgatc ccagggccag gggcacgccg
     3421 cccagcaagg ccgccatggt ggtcatgatg atgggccgga accgcagcag ggaggcctgg
     3481 tagatggctt cctcgggcgg caggccgtcc ttgcgttcgg cctccagcgc gaagtcgatc
     3541 atcatgatgg cgttcttctc cacgatgccg atcagcagga tgatgccgat cagcgcgatc
     3601 acgctgaagt ccgtgcggca gagcatgagc gagagcaggg cgcccacccc cgccgatggc
     3661 agggtggaga ggatcgtgac ggggtggatg tagctctcgt acagcacgcc cagcaggatg
     3721 taaaccgtga gcaccgcggc gaggatgagc agcggcgtgt tggtgaggga ggcgccgaag
     3781 gcctgggccg tgccctggaa gccggccttg atgctcggcg gcaggtccag gtcccggcgg
     3841 gcctggttca cagccttcac cgcgtcgccg agagacgcgc ccggggccag gttgaaggac
     3901 acggtggccg tggggaactg gccctggtgg ttgatggcga ggggggcggt cacggtctcg
     3961 atgcgggtga aggcgctgag gggcaccgag ccgcccgagg ccgagcgcac atagatgttc
     4021 tggaggtcgc cgggctgccg gtactggccc ggctgggcct ccagcaccac gcggtactgg
     4081 ttcagctggg tgaacatggt ggaaatctgc cgctggccga aggcgtcgta cagggcgtcg
     4141 tccagcatct ggggcgtgat gcccagccgc gaggcggtgg tgcgatcgag ggagatgcgg
     4201 atctgcaggc ccgcgttctg ctggtcactg gccacgtcgc gcagctcggg aatggccgcg
     4261 aggcgttcca cgaaccgggg cgtccattcg gccagctccc tgggatccgc atcctccagc
     4321 gtgtactggt actgggtgcg gctgacgcgg tcttccaccg tgaggtcctg caccggctgc
     4381 atgtagaggc ggatgccctc caccttggcc agctggggct gcaggcggtg gatcacctcg
     4441 ctggcgctga ggccacgctc ctcgaggggc ttgaggttga tctggatgcg cccgctgttg
     4501 agcgtggtgt tggtgccgtc gatgccaatg aaagatgaaa ggctttccac agccgggtcc
     4561 ttgaggatct cggcggagag gcgctgctgg cgctcggcca tggccgggaa cgagacggtc
     4621 tgtggggcct cggagatgcc caggatcaca cccgtgtcct gcacggggaa gaaacctttc
     4681 gggatgacga ggtagagcag cacggtggaa gcgagggtgg ccacggccac caccagggtg
     4741 cccgtctggt gcttgagcac ccaggcgagg gtgcggccgt agaaggcgat gacccgctgg
     4801 aacacccgct cggaggactg gtagaaccgg ccctgttcct ccggcggcgt gtgcttcagg
     4861 agcttggcgc acatcatcgg ggtgagcgtg agcgagacca cggcggagac caggatggtg
     4921 acgctgaggg tgacggcgaa ctcccggaag aggcgaccca cgatgtcgcc catgaaaagc
     4981 agaggaatga gcacggcgat gagggagacg gtcaacgaca ggatggtgaa gccgatctgg
     5041 cctgagccct tgagcgccgc ctggaggggc ggctcgccct cctcgatgta gcgcatgatg
     5101 ttctcgatca tcacgatggc gtcgtccacc acgaagcccg tcgaaatggt gagcgccatc
     5161 agcgtgaggt tgttcaggct gtagcccagc aggtacatca ccccgaaggt gcccaccagg
     5221 gatagcggca cggccacgct ggggatgatg gtggccgcca gggtgcgcag gaacaggaag
     5281 attaccatca ccaccagggc gatggtgagc atcagctcga attccacgtc gtgcaccgag
     5341 gcgcggatgg tgacggtgcg gtccgtgagg atgttcagct ccacggaggc gggcagcgag
     5401 gcgcgcagct ggggcagcag gtccttgacc cggtccacca cggcgatgat gttggccccg
     5461 ggctggcgct ggatgttcag aatgacggcg ggggtggtgt tcttccaggc ggcgaggcgg
     5521 atgttttcca cgtcatcggt caccagggcc acttcggaaa gcagcacggg ggcgccgttc
     5581 cggtaggcca ccacgagggg gcggtattcc tcgctggaca gcagctggtc gttggcgccg
     5641 atggcatagg cctgccgcag gccgtcgaag ctgcccttgg cctggttcac gttgctctgg
     5701 gctacggcgg tgcgcacgtc gcccagggtg aggcccttgg cggccagagc ggacgggctt
     5761 gcctggatcc gcacggcggg cttctggccg ccgctgatgc tgacgagacc cacgcccggc
     5821 agctgggaga tcttctgcgc caggcgggtg tcggcgaaat cctgcacctt ggagaggggc
     5881 agcgtcttcg aggtgagggc cagggtcagg atgggcgcgt cggcggggtt gatcttgctg
     5941 tagatgggcg gattggggag gtcccggggc aggtaggtgc ccgcggcgtt caccgccgcc
     6001 tgcacctgct gttcggccac gtcgatgttc aggtccagca cgaactgcaa ggtgatgacc
     6061 gagctgccgc cggagctggt ggacgacatg cggttgaggc cgggcagctg gccgaactga
     6121 cgctccagcg gcgcggtgat ggccgaggcc atcacgtcgg ggctggcgcc ggggtagaag
     6181 gtgaccacct ggatggtggg gtagtccacc tggggcaagg ccgagacggg aagctgacgg
     6241 aaggccagga ggcccaccag cagcaggccc accatgagga gggaggtcgc gatgggccgg
     6301 aggatgaagg gccttgaggg attcaccgaa tcagcccttc gcgcccgcgg gcttgggcag
     6361 gatgactttg ctgcccgggc ggagcttttc gaggccgtcg gtgaccacca gttcgccgcc
     6421 ggagagcccc tgcttcacgg ccgagtcgtc gccgtcggtg cccagcacct cgatggcgcg
     6481 gaggtccacg gtgctgtctt ctttcaccac gtagacgaag gctccctgcg ggctgcgctg
     6541 gacggcggcg gtggggatga tcacgacgcc cttcagcgtg tccaccagca gctgggcgtt
     6601 cacgaactgg ttgggaaaca gggcccggtc gtcattggcg aagatggcct tcatgcgcac
     6661 ggtgcccgtg gcgggatcca cctggttgtc gatggcggcc agggcgccgg aggcgaggcg
     6721 ggtccgcagg tcgcggtccc aggcctcgac gggaagacgg ccgcccttgg cgttctggct
     6781 catcacccgc tggatgctgt cggctggcac ggcgaacacg acgttgatgg gctggatggg
     6841 cgcgatggtg gcgaggccgt tggcgtcgct ggcccgcacc atgttgccgg cgtccacgag
     6901 gcgcaggccc accctgcccg agatgggcgc ggtgatgcgg ctgtaggtca ggttcaggcg
     6961 ggcgctttcc actgcggcct ggtcggcctt cagggcagcc tcgaactgcg cgacggaggt
     7021 ggtctgggtg tcca
//
LOCUS       DATGWW010000665         1519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_399887, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000665 DATGWW010000000
VERSION     DATGWW010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_399887"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..1429)
                     /locus_tag="VK150_09670"
     CDS             complement(29..1429)
                     /locus_tag="VK150_09670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31619.1"
                     /translation="MLTVFLTESAALLRMVQAVTLFLLMAACVPSALRAGEPRIVALH
                     NLDSAEVRHQGFTLPRAMKVHVYAKGAGLRRIIRASGDAPLFAYGWILNATTREVVWQ
                     MDGSNTKRDWEYRVADQYLDLPAGSYEAYFANHGFGQSLLFAQWSRNIDRRSLAAREG
                     ERHQGFLAAFGADDVSLLRHWREQVGNYGMEIYLPGGQVSEVNTFEGPLRWKNIVVAL
                     PAATDDGHWTQAFHLRKPVTLHVYGEGEGSGRRMHDYGWILDARTRTRVWEMTMDKSQ
                     FAGGARKNRRQVETLQLPAGDYEATFITDDSHSPADWNSAPPCDPAMYGLTLALPADA
                     DLAAFTATKPLEWSVLAELVRVGNAQDRTAPLTLAAGRTVRIHAIAEADGDDMADEAW
                     IEDAAGKRVWVMERSRTHHAGGASKNRLADELISLPKGTYTLRFRTDESHAYGHWNSD
                     APWDAERYGLTVYAGK"
BASE COUNT          209 a          508 c          555 g          247 t
ORIGIN      
        1 cgcggcgggc ctggctcggc ccagggggct atttccccgc gtagaccgtc agcccgtagc
       61 gctcggcatc ccagggcgcg tcgctgttcc agtggccgta ggcgtggctt tcatccgtgc
      121 ggaaccgcag ggtgtaggtc cccttgggca ggctgatcag ctcgtcggcc agccggttct
      181 tggacgcgcc gccggcgtga tgggtgcggc tgcgctccat cacccagacc cgcttcccgg
      241 cggcgtcctc gatccaggcc tcgtcggcca tgtcgtcccc gtcggcttcc gcgatcgcgt
      301 ggatccgcac ggtccgcccc gcggccaggg tgaggggcgc ggtccggtcc tgggcattgc
      361 ccacccgcac cagctccgcc agcacggacc actccagggg cttggtcgcg gtaaaggcgg
      421 cgaggtccgc gtcggcgggg agcgccagcg tgaggccata catggccgga tcgcagggag
      481 gcgcgctgtt ccagtccgcc ggggagtggg aatcgtcggt gatgaaggtg gcctcgtagt
      541 ccccggcggg cagctggagg gtttccacct ggcgccggtt cttgcgggcg ccgccggcga
      601 actgggactt gtccatggtc atctcccaga cccgggttcg ggtacgggca tcgaggatcc
      661 agccgtagtc atgcatgcgc cggccgctgc cctcgccctc gccatagaca tgcagcgtga
      721 cgggcttgcg caggtggaag gcctgggtcc agtgtccgtc gtcggtggcg gcgggcaggg
      781 ccaccacgat gttcttccag cgcagaggcc cttcgaaggt gttcacctct gagacctgtc
      841 cgccgggcag gtagatttcc atgccgtagt tccccacctg ctcccgccag tggcgcagca
      901 ggctgacgtc gtctgccccg aaggcggcca ggaatccctg gtggcgctcg ccctccctgg
      961 cggcgaggga acgccggtcg atgttgcggc tccactgcgc gaagagcagg ctctggccga
     1021 agccgtggtt ggcgaagtag gcctcgtagc tgcccgcggg caggtccagg tactgatcgg
     1081 cgacccggta ctcccagtcg cgcttggtgt tcgagccatc catctgccag accacctccc
     1141 gggtcgtggc gttcaggatc cagccgtagg cgaacagcgg cgcgtccccc gaggcccgga
     1201 tgatccgccg gaggccggcg cccttggcgt agacgtgcac cttcatggcg cggggcagcg
     1261 tgaagccctg gtggcgaacc tcggcgctgt cgaggttgtg cagcgcgacg atgcggggct
     1321 cgccggcgcg cagggccgaa ggcacgcagg cggccatgag caggaagagg gtcacggcct
     1381 ggaccatgcg aagcagggcg gcgctttcgg tcaggaacac ggtcagcatg ggaccccctt
     1441 gggacagtcc caaagtaccc ctctggaacg ggccggttgc acaggatcgg cgaacggcgg
     1501 gtgcctgccg gcgaatggc
//
LOCUS       DATGWW010000666         1891 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_133059, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000666 DATGWW010000000
VERSION     DATGWW010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1891
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133059"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..431)
                     /locus_tag="VK150_09675"
     CDS             complement(114..431)
                     /locus_tag="VK150_09675"
                     /inference="COORDINATES: protein motif:HMM:NF012442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HLP31620.1"
                     /translation="MAENLSKAELVDALAKAADITKVAAATALNCALATIAAHVNKGG
                     KVTLVGFGTFSQKSRKARTGRNPQTGAPIKIAASKSMSFKASKAAKAAKPKAKAAKPA
                     KKK"
     gene            complement(767..1237)
                     /locus_tag="VK150_09680"
     CDS             complement(767..1237)
                     /locus_tag="VK150_09680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31621.1"
                     /translation="MRLLLASCLALALSAAPPDARDCVACHDTMNLDAFRTRTHGKLA
                     CVDCHTAITTLPHAEKLPPPLCVRCHDHEGQDYSNSVHGVARKQGKDHAPTCTTCHGH
                     AHEVVPRNHPGSKVARQNMDATCGKCHDQGFLKKLSTRLPRRASRMDLKRMPGK"
     gene            complement(1281..>1891)
                     /locus_tag="VK150_09685"
     CDS             complement(1281..>1891)
                     /locus_tag="VK150_09685"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HLP31622.1"
                     /translation="WGHREDLAGIRAFAIRLMPPSLIGGALGAWLMLVTPQKVFDQLV
                     PWLILAATVLLAANEPVSRLLKKVHGHERTPGWWIAAMAFQFVVGIYGGYFGAGIGIL
                     MLAALSLLGLTDIHQMNGLKNLLALCMNGIAIFAFLAMEFIRHPGNVKWMLVVPMALA
                     AGLGGLFGSRMAHRVGRTKVRAGVVAIGFLLAAWYFYKTYGI"
BASE COUNT          298 a          584 c          684 g          325 t
ORIGIN      
        1 cggagccggg gctcttcgac catctggagg actgaggcgg cgcgtgctgc cataccgatt
       61 cgaagcaacg aaaaaggggc ctttcggccc ctttttcgtt ctggcggaac cgcctacttc
      121 ttcttggcgg gcttcgcggc cttggccttg ggcttggcgg ccttggcggc cttcgacgcc
      181 ttgaagctca tggacttcga ggcggcgatc ttgatggggg cgccggtctg ggggttgcgg
      241 cccgtgcgag ccttgcggct cttctggctg aaggtgccga agccgacgag ggtgaccttc
      301 ccgcccttgt tcacgtgggc ggcgatggtg gcgagcgcgc agttgagcgc ggtagctgcg
      361 gcgaccttgg tgatgtcggc agccttggcg agcgcgtcaa ctagttcagc cttggagaga
      421 ttttcggcca agggaggcct cctgtgagta aagcgccaac gggcgccggt tgtgatgacg
      481 actggcgagt gcgccatgcc gctaggatat tgccccaatt tccgcacaga tcaagttcag
      541 aaaatgtccc cgtttttgaa gcgggccccc atccccgctg ggattccggc cgtccggggc
      601 cgccgccccg gacggccggc gctcggaatt cccaggcgcc atcagggttt ccgcgccatg
      661 gcccaccggc ccgccagccg cggatccagg ctggggaagg gttcgggagg gctgaaaaaa
      721 gtttgccggc cggtacccat cggccctgga aggggggccg aacggctcac ttcccgggca
      781 tccgcttgag gtccatgcgc gacgcccgcc ggggcaggcg ggtggagagc ttcttcagga
      841 agccctggtc gtggcacttt ccgcaggtgg cgtccatgtt ctgccgggcg actttggagc
      901 ctggatggtt cctgggcacc acctcgtggg catggccgtg gcaggtggtg caggtggggg
      961 cgtgatcctt cccctgcttg cgcgcgacgc cgtggacgct gttcgaatag tcctgccctt
     1021 cgtggtcgtg gcagcgcacg cagagcggcg gcggcagctt ctccgcatgc ggaagggtgg
     1081 tgatggccgt gtggcaatcc acgcaggcca gcttgccgtg ggtgcgggtg cggaatgcgt
     1141 caaggttcat cgtgtcgtgg caggccacgc agtcccgcgc atcgggcggc gcggcggaca
     1201 gggccagggc gaggcagctg gcgagcagca ggcgcatggg tcctccttgg gaaagatggc
     1261 ccacgctagc acagcctgga tcagattccg taggtcttgt agaaatacca ggcggccagg
     1321 aggaagccga tggccaccac gccggcccga accttggtcc ggccgacgcg gtgggccatg
     1381 cgggagccga agaggccgcc caggcccgcg gccaaggcca tcggcaccac cagcatccat
     1441 ttcacgttgc ccgggtggcg gatgaattcc atcgccagga aagcgaagat ggcgatgccg
     1501 ttcatgcaga gggccagcag gttcttcaga ccgttcatct ggtggatgtc cgtgaggccc
     1561 agcaggctca gggcggccag catcaggatg ccgatgcccg caccgaagta cccgccgtag
     1621 atgcccacca cgaactggaa ggccatggcg gcgatccacc agcccggggt gcgctcgtgg
     1681 ccgtggactt tcttcagcag cctgctgacc ggctcattgg ccgccagcag cacggtggcc
     1741 gccaggatca gccagggtac cagctggtcg aacaccttct gcggcgtgac gagcatgagc
     1801 caggcgccca gggcgccgcc gatgagggac gggggcatga ggcggatcgc gaaggcgcgg
     1861 atgccggcga gatcctcccg gtggccccag a
//
LOCUS       DATGWW010000667         1887 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_163651, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000667 DATGWW010000000
VERSION     DATGWW010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163651"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..702)
                     /locus_tag="VK150_09690"
     CDS             complement(<1..702)
                     /locus_tag="VK150_09690"
                     /inference="COORDINATES: protein motif:HMM:TIGR03718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC/Alx family metal homeostasis membrane
                     protein"
                     /protein_id="HLP31623.1"
                     /translation="MVDALLQAAPWWAWAGFHAFVFLMLALDLGVFNRRIHAPSVREA
                     AIWSTVWITLALLFNALIFQAEGAQKGLEWLTGYVLEKSLSVDNLFVFVLVFQSFQVD
                     LRHQHRVLFWGVLGALIMRAAMILAGTALLNRFEWMMYVFGGFLVYTGIKMLLVKGQE
                     SDPTQNPMVRAFKRVVPYDENGGHEHFWVHRAGRHFATPMLLVLITIEVTDLVFAVDS
                     IPAVLAVSRDPFVVYT"
     gene            772..1500
                     /locus_tag="VK150_09695"
     CDS             772..1500
                     /locus_tag="VK150_09695"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HLP31624.1"
                     /translation="MSLPRFFLPAGPAAENTLASLDAEAARHLKALRLKPGAALEVVL
                     GDRPWKADLAELDRGRATARLVAPLEEDREPPFALEACLPLPAQLSLFDDWLPPLVEL
                     GATLIQPIVYSRSEFDPAKTAARLDRWARLIQSACEQSHRGRLPELRPPAPFEALLAW
                     DAPQKWVAYELATGQANPVLRPQALAFTSGPEGGITEAEFQALAAAGWRPVSLGRSIL
                     RAVTAPVALLGAVQFQLPGLAGPG"
     gene            1646..>1887
                     /locus_tag="VK150_09700"
     CDS             1646..>1887
                     /locus_tag="VK150_09700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31625.1"
                     /translation="MKLVTLLSAAALMTAPLMAGDYDALGKAMRSTWPQVTTVAVVCD
                     AANSKVAVEAIHSALPGVKILVVDVKGQQDMGKALGT"
BASE COUNT          317 a          678 c          607 g          285 t
ORIGIN      
        1 ggtgtagacg acgaagggat cgcggctcac cgccagcacg gcggggatgg aatccacggc
       61 gaagaccagg tccgtcacct cgatggtgat gagcaccagg agcatggggg tggcgaagtg
      121 ccgccccgcc cggtgcaccc agaagtgctc gtgaccgccg ttctcgtcgt agggcacgac
      181 ccgcttgaag gcccgcacca tcggattctg ggtcggatca gactcctgtc ccttcacgag
      241 gagcatcttg atgcccgtgt agaccaggaa gccgccgaag acgtacatca tccactcgaa
      301 gcggttcagc agcgccgtgc ccgccaggat catggcggcc cgcatgatca gcgcccccag
      361 cacgccccag aacagcaccc ggtgctgatg ccgcaggtcc acctggaaac tctggaacac
      421 gagcacgaag acgaagaggt tgtcgacgct gagggacttc tcgaggacgt agcccgtgag
      481 ccactccaac cccttctggg cgccctccgc ctggaagatc agggcgttga agagcagggc
      541 cagggtgatc cagacggtgc tccagatggc cgcctcgcgc accgaggggg cgtggatccg
      601 ccggttgaac accccaaggt cgagggccag catcaggaac acgaaagcgt ggaatccggc
      661 ccatgcccac cacggggcgg cttgaagcag tgcgtcgacc aataggtcct cctcgacatc
      721 cagcttaccg aagggtggaa gtccaccgga tcccgatggg atcatgcttc ggtgagcctc
      781 ccccgcttct tcctccccgc tggtcccgcc gccgagaaca cgctggcgtc cctcgatgcc
      841 gaggccgccc ggcatctcaa ggccctgcgc ctcaagccgg gcgcggcttt ggaggtggtg
      901 ctgggcgacc gcccctggaa ggccgacctg gccgagctgg atcgcgggcg cgccacagcc
      961 cggctggtgg cacccctcga ggaggaccgc gagccgccct tcgccctgga agcctgcctg
     1021 cccctgccgg cccagctgag cctcttcgac gactggctcc ccccgctggt ggaattgggc
     1081 gccacgctga tccagcccat cgtctacagc cgcagcgaat tcgaccccgc caagaccgcg
     1141 gcccgcctcg accgctgggc ccggctcatc cagtccgcct gcgagcagag tcatcgcggc
     1201 cgcctgcccg agctgcgccc cccggcgccc ttcgaggccc tcctcgcctg ggacgccccc
     1261 cagaaatggg tggcctacga gctggccacc ggccaggcca atccggtcct gcgcccccag
     1321 gcgctggcct tcaccagcgg ccccgaggga ggcatcaccg aggcggaatt ccaggccctg
     1381 gccgccgccg gctggcggcc ggtcagcctc ggccgcagca tcctccgggc cgtgaccgcc
     1441 cccgtggccc tgctgggggc cgtgcaattc cagcttcccg gcctggcggg gcctggctga
     1501 gacattggtc acgacccctc aggtatttta tatcggtgtt gatttcagtg aacttgcccg
     1561 cttcaggttc ggtacctacc cgccgataag gtgcaggtgc ccaggccgag gtgtgttcgg
     1621 cgggccccac cgaggagatg acgccatgaa gcttgtgacc cttctgtccg cagccgccct
     1681 gatgaccgcc cccttgatgg ccggcgacta cgatgccctg ggcaaggcca tgcgcagcac
     1741 ctggccccag gtcaccaccg tggccgtggt ctgtgatgcc gccaacagca aggtcgcagt
     1801 ggaagcgatc cacagcgccc tgcccggcgt gaagatcctc gtggttgacg tcaagggcca
     1861 gcaggacatg ggtaaggccc tgggcac
//
LOCUS       DATGWW010000668         2361 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_215158, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000668 DATGWW010000000
VERSION     DATGWW010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215158"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2361)
                     /locus_tag="VK150_09705"
     CDS             complement(<1..>2361)
                     /locus_tag="VK150_09705"
                     /inference="COORDINATES: protein motif:HMM:TIGR00914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HLP31626.1"
                     /translation="SARHTPLDAIPDLSDTQVIVYSRWDRSPDIVEDQVTYPIVTSLL
                     GAPKVKAVRGLSDFGFSYVYVIFEDGTDIYWARSRTLEYLSKITSSLPPGVQTSLGPD
                     ASSVGWVYQYALVDRSGKHSLDELRSLQDWFLRYAIQSTPGVAEVATVGGQAKQFQVQ
                     LNPNKMAAYRIPIESVIGAVKSANSEVGGRLVEYSGREYMVRGRGYVKTTQDLEQAVL
                     KAENGTPVRLGDVATVSLGPEMRRGLADLDGQGDVVGGIVVMRQGENALNVIERVKTR
                     LGELKQGLPEGVEVVTVYDRSELIENSIKTVKHKLIEEMIIVSIIILIFLWHVPSALV
                     PIITIPVSVGLAFIPLYGIGQNANLMSLAGIAISIGVLVDGAIVEVENAYKKIEKWIE
                     AGKPGSFYQVRLEALMEVGPSVFFSLLVVAVSFMPIFTLLDQEGRMFKPLAYSKNLAM
                     AIAAVLALTLDPAMRMLFARVEPFSFKPRWLAWTATQFAVGKYYAEEKHPISVFLHRI
                     YERPCRFVVRHAKATIGVAVLLVLATIPAFVSLGSEFMPPLNEGTLLYMPSTLPGLSQ
                     TEAQRILQVQDRLIRTVPEVARVFGKAGRADTATDPAPFSMMETVIILKPEEQWREKP
                     RWFSAWAPDFLKAILRPVWRDRITQEDIVADLDRVVRLPAIPNAWTMPIKARLDMLST
                     GIRTPVGIKINGADLEVIQKVAVDAERILQGVAGTRSAFAERTAQGYFLDFVLRREQL
                     ARYGLSVEQANMLVMTAIGGDNQSTVFDGRARYPVNVRYARDYRGS"
BASE COUNT          370 a          765 c          824 g          402 t
ORIGIN      
        1 ccgatccgcg gtagtccctg gcgtagcgca cgttcaccgg gtagcgggcc cggccatcga
       61 agaccgtgct ctggttgtcg ccgccgatgg cggtcatcac cagcatgttg gcctgctcca
      121 cgctgaggcc gtaccgggcc agctgctcgc gcctcagcac gaaatccagg aagtagccct
      181 gggccgtgcg ctcggcgaag gcgctgcggg tgcccgccac accctggagg atgcgctcgg
      241 cgtccacggc gaccttctgg atgacctcca ggtcggcgcc gttgatcttg atgcccacgg
      301 gggtccggat gccggtgctg agcatgtcca ggcgggcctt gatgggcatg gtccaggcgt
      361 tggggatggc cggcaggcgc accacccggt cgaggtcggc gacgatgtct tcctgggtga
      421 tgcggtcccg ccacaccggg cgcaggatgg ccttgaggaa gtcgggggcc caggcgctga
      481 accaccgcgg cttttcgcgc cactgctcct cgggcttcag gatgatgacc gtctccatca
      541 tggagaaggg cgccgggtcc gtggccgtgt cggcgcggcc cgccttgccg aacacccggg
      601 ccacttcagg cacggtgcgg atgagccggt cctgcacctg gaggatgcgc tgggcctcgg
      661 tctggctgag gcccggcagg gtggagggca tgtagagcag cgtgccttcg ttcaggggcg
      721 gcatgaactc gctgcccagg gagacgaagg cggggatggt ggccagcacc agcagcaccg
      781 ccacgccgat cgtggccttg gcgtgccgca ccacgaagcg gcagggccgc tcgtagatgc
      841 ggtgcaggaa gacgctgatg gggtgcttct cctcggcgta gtacttcccc accgcgaact
      901 gggtggcggt ccaggccagc cacctcggct taaagctgaa gggctccacc cgggcgaaga
      961 gcatgcgcat ggccgggtcg agggtgaggg cgagcacggc ggcgatggcc atggccaggt
     1021 tcttcgagta ggccaggggc ttgaacatgc gcccctcctg gtcgaggagg gtgaagatgg
     1081 gcatgaagct caccgccacc accagcagcg agaagaacac gctgggtccc acctccatca
     1141 gggcttcgag ccgcacctgg tagaagcttc ccggcttccc ggcctctatc catttttcga
     1201 tcttcttgta ggcgttctcc acctccacga tggcaccgtc caccagcacg ccgatggaga
     1261 tggcgatgcc ggcgaggctc atcaggttgg cgttctggcc gatgccgtac agcgggatga
     1321 aggccagccc cacgctgacg gggatggtga tgatgggcac cagggccgag ggcacgtgcc
     1381 acaggaagat gaggatgatg atcgagacga tgatcatctc ctcgatgagc ttgtgcttca
     1441 cggtcttgat ggagttctcg atgagctcgg agcggtcata gaccgtgacc acctccacgc
     1501 cctcgggcag gccctgcttc agctccccga ggcgggtctt cacccgctcg atgacgttca
     1561 gggcgttctc gccctggcgc atgaccacga tgccgcccac cacgtcgccc tggccgtcga
     1621 gatccgccag gccccggcgc atctcgggcc cgaggctcac ggtcgccacg tcgcccaggc
     1681 gcaccggggt tccgttctcg gccttgagca cggcctgctc cagatcctgg gtggtcttca
     1741 cgtagccccg gccccggacc atgtactccc ggccgctgta ctccaccagg cggccgccca
     1801 cttcggagtt ggccgatttc acggcgccga tgaccgactc gatgggaatg cggtaggccg
     1861 ccatcttgtt gggattgagc tgcacctgga actgcttggc ctggccgccc accgtggcca
     1921 cttcggccac gcccggcgtg ctctggatgg cgtagcgcag gaaccagtcc tgcagggacc
     1981 tcagctcatc caggctgtgc ttcccgctgc ggtccaccag ggcgtactgg tagacccagc
     2041 ccacggagct ggcgtcgggg cccagcgagg tctgaacacc cgggggcagg ctcgaggtga
     2101 tcttgctgag gtactccagc gttcggctac gggcccagta gatgtccgtg ccgtcctcga
     2161 agatcacgta gacgtaggag aagccgaagt cggagaggcc gcgcacagcc ttcaccttgg
     2221 gggcgcccag gaggctggtg acgatggggt aggtgacctg gtcctcgacg atgtccgggc
     2281 tgcggtccca gcgcgagtag acgatgacct gggtgtccga gaggtcgggg atggcgtcga
     2341 gcggcgtgtg ccgcgccgac c
//
LOCUS       DATGWW010000669         2740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_163726, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000669 DATGWW010000000
VERSION     DATGWW010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163726"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1223)
                     /locus_tag="VK150_09710"
     CDS             complement(<1..1223)
                     /locus_tag="VK150_09710"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLP31627.1"
                     /translation="MTAEPTFREKYAFPASFWNANITELFERAAYYSMASFIVIYLGR
                     LGLGDYWPSTLNGILWFLVYFLPILSGTIADQIGFRRSLLMACVLLVCGYFLMGYPVW
                     FGGQTMALQAGKEVTAGMGVMAPVAAAIVLIGIGGSFVKPCIAGTVQRTHLGKATLAF
                     AIFYMVINIGSVFGRLTAFFVRTKLGKLDTIFLVSMVASVLAFLTVLLLYRDPESAGD
                     PAKPRRTVSEVLLGMFKVLGNGRFVLFLVVSSGFYFIYNQVYNVLPLYVKKTVELTPA
                     MDLYTMANPITIVLFQLLITKLFGKLPPIKSIIVGTVIIGLAMLINVAPLFMAGGVTA
                     KMLLPVGSLFVVLTVALIAFGELFASSRLYEYIGSLAPKGQEGLFLGYANLPMAIGSL
                     VGGPAGAWLFNKVMCA"
     gene            1347..>2740
                     /locus_tag="VK150_09715"
     CDS             1347..>2740
                     /locus_tag="VK150_09715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HLP31628.1"
                     /translation="MEGSKGNIGVPLGLALAPALALALACGGGSGKGAAPVPISVTIA
                     PAGASLWTGGTQAFQATVAGTSNQAVTWSVVETGGGTISAGGLYTAPAAPGTFHVKAA
                     AEADATKTAQAPVTVAIQPPAGACNGAALGVGASLQGFTPFPSDNPWNRDISGDPVDP
                     NSGTIIAFIGGGTGLHPDFGAGLYGGGPIGIPYTVVSSAAQAKVPVTFTMYGSESDPG
                     PMPIPATAPVEGGSGSNGDRHVLVLDRDTCLLYELYRAFPQGNGSWNAEGASVWDLRS
                     NTLRPYGWTSADAAGLPIFPGLARYDEVAAGAITHALRFTVPTTRRAYVLPATHWASS
                     NTSASAPPMGLRVRLKAGVDISSYPAQARVVLAALKRYGMILADNGSPWYISGAPDDR
                     WDNDQLATLSRIKGSDLEVVQMGTVHTADPTGPAPAISSFTATPANTTTGAGAVLAWS
                     TTNATRWFLSPDPG"
BASE COUNT          468 a          976 c          922 g          374 t
ORIGIN      
        1 gcgcacatca ccttgttgaa gagccaggcg cccgcggggc cgcccaccag gctgccgatg
       61 gccatgggca ggttcgcgta gccgaggaac aggccctcct gccccttggg cgccagagag
      121 ccgatgtact cgtacaggcg gctcgaggcg aagagctcgc cgaaggcgat gagggccacc
      181 gtcagcacca cgaagaggct gcccacgggc aggagcatct tcgccgtcac gccgcccgcc
      241 atgaagagcg gcgccacgtt gatgagcatg gccaggccga tgatcaccgt gcccacgatg
      301 atcgacttga tggggggcag cttgccgaac agcttcgtga tgagcagctg gaacagcacg
      361 atggtgatgg ggttggccat ggtgtagagg tccatggccg gcgtgagctc cacggtcttc
      421 ttcacgtaga gcggaagcac gttgtagacc tggttgtaga tgaagtagaa cccgctgctc
      481 acgaccagga agaggacgaa gcggccgttg cccagcacct tgaacatgcc caggagcacc
      541 tcggagaccg tgcggcgggg cttggcggga tccccggcgc tctcgggatc gcggtagagc
      601 agcagcaccg tgaggaaggc caggaccgag gccaccatgg acacgaggaa gatggtgtcg
      661 agcttgccga gcttcgtgcg cacgaaaaag gccgtgaggc ggccgaagac gctgccgatg
      721 ttgatgacca tgtagaagat ggcgaaggcc agggtggcct tgcccaggtg ggtgcgctgc
      781 acggtgccgg cgatgcaggg cttcacgaag gagccgccga tgccaatgag cacgatggcc
      841 gccgccaccg gcgccatcac ccccatgccc gcggtgacct ccttgccggc ctggagggcc
      901 atggtctgcc cgccgaacca cacggggtag cccatgagga agtagccgca cacgagcagg
      961 acgcaggcca tgagcaggct gcgccggaag ccgatctggt cggcgatggt gccgctcagg
     1021 atgggcagga aatagaccag gaaccagagg atgccgttca gggtgctggg ccagtagtcg
     1081 ccaagaccca ggcggcccag gtagatgacg atgaagctgg ccatggaata gtaggccgcg
     1141 cgctcgaaca gctcggtgat gttcgcgttc cagaagctgg cggggaacgc gtacttctcg
     1201 cggaaggtgg gctcggcggt catggctacc tcaaggtcca gttagtgtgg cacgggtgcc
     1261 ccaggatgcg ggcacgaccc ggcggcccgt tgactttccc gccgctctga caacactcac
     1321 ctcttgcgcc accaccggga ggcttcatgg aaggctcgaa gggcaacatc ggtgttcccc
     1381 tcggactggc cctggctcca gctctggccc tcgccctggc ctgcggcggc ggatccggca
     1441 agggcgcggc cccggtgccc atcagcgtca ccatcgcccc cgccggcgcc agcctgtgga
     1501 ccggcggcac ccaggccttc caggccaccg tcgcgggcac ctcgaaccag gccgtcacct
     1561 ggagcgtggt cgagaccggg ggaggcacca tcagcgccgg cggcctctac acggcccccg
     1621 cggcgccggg caccttccac gtgaaggccg ccgccgaagc ggacgccacc aagaccgcgc
     1681 aggccccggt caccgtggcg atccagcccc cggcaggcgc ctgcaacggc gcggccctgg
     1741 gcgtgggcgc gagcctgcag ggcttcacgc ccttcccgtc cgacaacccg tggaaccgcg
     1801 acatctccgg cgacccggtg gatccgaaca gcggcaccat catcgccttc atcggcggcg
     1861 gcacgggcct gcatcccgat ttcggcgccg ggctctatgg cggcgggccc atcggcattc
     1921 cctacaccgt ggtgtcctcc gcggcccagg cgaaggtgcc tgtgaccttc acgatgtatg
     1981 gcagcgagag cgaccccggc cccatgccca tcccggcgac tgcgcccgtg gagggcggca
     2041 gcggctcgaa cggcgaccgg catgtgctcg tcctggaccg cgacacctgc ctgctctatg
     2101 agctgtaccg ggccttcccc cagggcaacg gcagctggaa cgcggagggc gcctcggtgt
     2161 gggacctcag gagcaacacc ctgcgcccct acggctggac cagcgccgac gcggcgggcc
     2221 tgccgatctt ccccggcctg gcccggtacg acgaggtggc cgccggcgcc atcacccacg
     2281 ccctgcgctt caccgtgccc accacgcgcc gggcctacgt gctgcccgcc acccactggg
     2341 cctcgagcaa caccagcgcc agcgccccgc ccatgggcct ccgcgtgcgc ctgaaggccg
     2401 gggtggacat cagcagctac ccggcccagg cccgcgtggt gctcgccgcc ctcaagcgct
     2461 acggcatgat cctcgccgac aacggcagcc cctggtacat ctccggcgcg ccggacgacc
     2521 gttgggacaa cgaccagctc gccacgctct cccgcatcaa gggttcggat ctggaagtcg
     2581 tccagatggg cacggtgcac accgccgatc ccacgggccc ggcgcccgcc atctcctcct
     2641 tcaccgcgac tccggcgaac accaccaccg gcgcgggcgc ggtcctcgcc tggagcacca
     2701 ccaacgccac ccgctggttc ctcagcccgg atcccggctg
//
LOCUS       DATGWW010000670         6616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_133162, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000670 DATGWW010000000
VERSION     DATGWW010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6616
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133162"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="VK150_09720"
     CDS             <1..250
                     /locus_tag="VK150_09720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31629.1"
                     /translation="QAFAQAVEEGWTLVGIGGRGTYAALDLLLGPLEGRAVNLAGILS
                     LGPMAALLQLCGGFLGGTPFLQQLASACHCRPARLGSA"
     gene            complement(247..1314)
                     /gene="rfbG"
                     /locus_tag="VK150_09725"
     CDS             complement(247..1314)
                     /gene="rfbG"
                     /locus_tag="VK150_09725"
                     /EC_number="4.2.1.45"
                     /inference="COORDINATES: protein motif:HMM:TIGR02622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047733 - CDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glucose 4,6-dehydratase"
                     /protein_id="HLP31630.1"
                     /translation="MEDLGMSGAMWRGTRVFLTGHTGFKGGWLALWLESLGAKVYGYA
                     LPPPTDPSLFEAVRLERKLSGHTLADLADRQALERALQAARPEVVFHLAAQPLVRQAY
                     AQPVETYLTNVMGTVHLLEAVRQCPSVRTVVNVTTDKCYENQGWAWGYRETDALGGLD
                     PYASSKACAELITAAFRRSYLAAGGLGVATARAGNVIGGGDWAADRLVPDALRALDAG
                     VPLEVRAPDSVRPWQHVLEPLSGYLSLAEHLHRDPKGHGEAWNFGPAEGDAHPVSWLL
                     DQLRVFEPGLHWRRVPDSGPHEAAFLRLDSSQARQRLGWRPRWDLARALQLTAEWHRA
                     WKEGRDMTEMSLAQIEAYGKP"
     gene            complement(1296..2069)
                     /gene="rfbF"
                     /locus_tag="VK150_09730"
     CDS             complement(1296..2069)
                     /gene="rfbF"
                     /locus_tag="VK150_09730"
                     /EC_number="2.7.7.33"
                     /inference="COORDINATES: protein motif:HMM:TIGR02623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047343 - glucose-1-phosphate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate cytidylyltransferase"
                     /protein_id="HLP31631.1"
                     /translation="MKAVILAGGLGTRLSEETVVKPKPMIEIGGRPILWHIMKIYSNH
                     GINEFIICLGFKGYIIKEYFSNYFLHMSDVTFDVQHNRMEVHEKHAEPWRVTLVDTGA
                     DTQTGGRLKRIAPYVQDEKVFCMTYGDGVANVDIKALLAFHEHNGKHASLTAVQPPGR
                     YGSLGMEGHTVKGFIEKPIGDGGWINGGFFALSPKCLDYIPGDATPWEGHSLVKLAAQ
                     GQLMGYKHHGFWQPMDTLRDKNHLENLWQQGTAPWKTWE"
     gene            2278..2715
                     /gene="fliS"
                     /locus_tag="VK150_09735"
     CDS             2278..2715
                     /gene="fliS"
                     /locus_tag="VK150_09735"
                     /inference="COORDINATES: protein motif:HMM:TIGR00208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HLP31632.1"
                     /translation="MQGYAGGKAADQYLVQRIQGASPEQLVALLLEGGQRFTTQALQA
                     MKVKDLPNQARYVNRVADIIVELRERLNHEAGGELVENLIRIYDWWTNELFDGSMKGQ
                     PERLQRIVQQMGEMRVTWEELHRRKAGGGQPPKPGTSLDGLSV"
     gene            2712..2999
                     /locus_tag="VK150_09740"
     CDS             2712..2999
                     /locus_tag="VK150_09740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31633.1"
                     /translation="MSDLELKAALDAMEQLLQGPGMDAPTLLAWQERFHEALGTAERG
                     PGWPDLVARAHGMAKRMDLAIQRLTAEKDALAGELNRSAQGARALKGYKPS"
     gene            complement(3022..4464)
                     /locus_tag="VK150_09745"
     CDS             complement(3022..4464)
                     /locus_tag="VK150_09745"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP31634.1"
                     /translation="MKPAAAALLAKVRDRLAHGGPEEVVEAFSRYLEAEPSDALAWAD
                     LAGLLLSLQRVEEALAACDKALTLQPRQPSALFHRASLHQRQGRWVEAETLLRQVLSL
                     SPGRVDALLALAKGRLAQVDPIEARAILQQVIHLEPANLAAHQYLGQVHYGQGQWEEF
                     HAEIERFRRFDPDSKYLVFEAGFENLLRGVMPQGWQEWEARLDVPGCVGPERTFTEPR
                     WQGESFEGRTLLVHYEQGLGDTLMLIRYLPLVKARGGRVVLLVQPQLAYLVTTCAGID
                     QVVPQGMPLPSFDLQVSLYSLPAVFQTSLETIPSEIPYLGVPRQVANAEPIAAALAAS
                     EGKVRIGLAWAGFSGHARDAERSIQAARLEPLGALPGVAWHGFQMGRTDVPPLPDYVS
                     LAPLLTSFSDTAYALTGMDLVITVDTALAHLAGALGIPTLLLVTYTPDFRWMLDRDDS
                     PWYPTLRIYRQPVPGDWDVVIRQVVADLSA"
     gene            complement(4539..6248)
                     /gene="fliD"
                     /locus_tag="VK150_09750"
     CDS             complement(4539..6248)
                     /gene="fliD"
                     /locus_tag="VK150_09750"
                     /inference="COORDINATES: protein motif:HMM:NF018852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HLP31635.1"
                     /translation="MASSLSFQGVTSGLQTDALIQAIMERDGLPVQRLKDRQTLNTQR
                     SAALNSMRLSMSSLSVSMAAFYDKLNARTVSSTDSNATFVTATATGAVGGSYEVKVAN
                     VATKGQLGPVMSGGVPTNMAVADPNAAILTSTNGSFAVQGTDGVVKAFKLTNNSLNGL
                     RDAINASGAGVTATVVNSGSGANPYQLILTAKETGTGTTGGVVRLAAIKNEDAGTTDT
                     TVVASLGIAAGTLTGTIASPGDLSGGLSSAGSGIAQDAVFSVNGVQLTRKTNTVKDAV
                     DGVTFTLRKGDATNATTLTVAQDKSAATAGMQDVLTKFNALLKVYKDASTAVKGSDGE
                     VVPGALTGDSTARSVINQVRAALNGNPDGLSASALYKSGAELGIKTAIDGTLSLDVTA
                     FQAALDKDPDAVKRVFSFSGTSTNGNVSFSSGTSATQTGAVDFDLTYGAGGAISGSLT
                     YNGVTYSGLSGVNGTLQGPTGSPLEGLNLAVTGSGTGTLTLSRGIGQKLQDLIAGLTS
                     YSGTIETTRTSLDEQNKSLTQRIESGQVLLDKRKAALKAQFDMMEATLSQMRSASSSL
                     SGI"
     gene            complement(6289..>6616)
                     /locus_tag="VK150_09755"
     CDS             complement(6289..>6616)
                     /locus_tag="VK150_09755"
                     /inference="COORDINATES: protein motif:HMM:NF015602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flagellar protein FlaG"
                     /protein_id="HLP31636.1"
                     /translation="SAVPASPKPKPSRPVESRPAVDPRSASASGPALEAATKSVEAFL
                     QRSSSSLKFGVDQETGSYTFKIIDPVTQETIRQVPSEEILEMARRLRALDNPKDASGI
                     LMDEEG"
BASE COUNT         1039 a         2184 c         2273 g         1120 t
ORIGIN      
        1 gcaggccttc gcccaggccg tggaggaggg ctggaccctc gtgggcatcg gcggccgggg
       61 cacctatgcg gccctggacc tcctgctcgg ccccctggag ggtcgcgcgg tgaacctcgc
      121 cgggatcctc agcctgggcc ccatggccgc cctgctgcag ctgtgcggcg gcttcctcgg
      181 gggcacgcct ttcctgcagc agctggcctc ggcctgccac tgccgccccg cgcggctggg
      241 ttcggcctag ggtttcccgt acgcctcgat ctgggccaac gacatctccg tcatgtcgcg
      301 cccctccttc caggcgcggt gccattccgc cgtgagctgg agggccctgg ccaggtccca
      361 ccggggccgc cagcccaggc gctgccgggc ctggctgctg tccagccgca ggaaggcggc
      421 ctcatggggc cccgaatccg gcacccgccg ccagtggagg ccgggttcga acacccgcag
      481 ctggtccagg agccaggaaa ccgggtgcgc gtccccttcg gcggggccga agttccaggc
      541 ctccccgtgg cccttcgggt cgcgatggag gtgttccgcc agcgagaggt agcccgagag
      601 gggctccaac acgtgctgcc agggacgcac cgaatccggc gcgcgcacct ccagcggcac
      661 gccggcgtcc agcgcgcgga gcgcatccgg aaccagccgg tccgcggccc agtcgccgcc
      721 gccgatgacg ttgccggccc gcgccgtggc gacgcccagg ccgcccgcgg ccaggtagga
      781 gcgccggaag gccgcggtga tcagctcagc gcaggccttg ctgctcgcat agggatcgag
      841 cccgccgagc gcgtcggtct cccggtaccc ccaggcccag ccctggtttt cgtagcactt
      901 gtcggtggtg acgttgacca cggtgcgcac cgaggggcac tggcggacgg cctccagcag
      961 gtgcaccgtg cccatgacgt tggtgaggta ggtttcgacg ggctgcgcgt aggcctgccg
     1021 gacgagtggt tgtgccgcca ggtggaagac cacctcggga cgggccgcct ggagggcccg
     1081 ctcaagggcc tgccggtcgg ccaggtccgc gagggtgtga ccgctgagct tgcgctcgag
     1141 acggaccgcc tcgaacaggc tggggtccgt ggggggcggg agggcgtagc cgtagacctt
     1201 cgcgccgagg gactcgagcc agagggcgag ccagccgccc ttgaagccgg tgtgcccggt
     1261 gaggaagacg cgcgtcccgc gccacatcgc gccgctcatt cccaggtctt ccacggggcg
     1321 gtcccctgct gccagaggtt ctcgaggtgg ttcttgtccc gcagggtgtc catgggctgc
     1381 cagaagccgt ggtgcttgta ccccatgagc tggccctggg cggccagctt caccagggaa
     1441 tggccttccc acggggtggc gtctcccggg atgtagtcga ggcatttggg tgataacgcg
     1501 aagaaaccgc cattaatcca tccgccatcc ccgatgggtt tttcgatgaa ccccttgacc
     1561 gtgtgccctt ccatgcccag cgaaccatag cgtcccggcg gctgcaccgc ggtgagggag
     1621 gcatgcttcc cattgtgttc gtggaatgca aggagtgcct tgatgtccac attggccacg
     1681 ccgtcgccat aagtcatgca aaacaccttt tcatcctgga catagggtgc gatgcgtttc
     1741 aggcgtccac cggtctgggt gtccgcgccg gtgtccacga gggtcacgcg ccacggctcg
     1801 gcatgctttt catggacttc catgcggttg tgctggacat cgaaggtgac gtcgctcatg
     1861 tgcaggaagt agttcgagaa atattccttg atgatgtagc ccttgaaccc gaggcaaatg
     1921 atgaattcat tgatcccatg gttcgagtag atcttcatga tgtgccagag gatgggccgg
     1981 cctccaattt cgatcatggg cttgggtttg acgacggttt cttcacttaa gcgcgttcca
     2041 agtccccccg cgagaatgac cgctttcatg gcttcctccg gttgcatcgg atcggcaagg
     2101 ttcattccca gcctacggaa agagaggcct gcgccttgag ttcatgccgc tgggctgggg
     2161 acagcttacc cgttcatgcc gggcctgtgg acctgtcctc ccggccttga cccgcctggg
     2221 gaaggtcaag actattcaaa cgccgcggag ttgccgaaag tcatcttgag ggaagccatg
     2281 cagggatatg ccggtgggaa ggctgcggat cagtacctgg tgcaacgcat ccagggggcc
     2341 agcccggaac agctggtggc gctgctgctg gaaggcggcc agcgcttcac cacccaggcc
     2401 ctccaggcca tgaaggtcaa ggatctgccc aaccaggccc gctacgtgaa tcgcgtggcc
     2461 gacatcatcg tggagctcag ggagcgcctc aaccacgagg cgggcggcga gctggtcgag
     2521 aacctcatcc gcatctacga ctggtggacc aatgagctct ttgacggctc gatgaagggg
     2581 cagcccgagc ggctccagcg gatcgtccag cagatgggtg agatgcgggt cacctgggaa
     2641 gagctccacc ggcggaaggc cggcggcggt cagcccccga agcccggcac gagcctcgac
     2701 ggactgtcgg tgtgagcgac ctggagctga aggccgccct cgacgccatg gagcagctgc
     2761 tccagggacc cggcatggac gcgccgacgc tcctcgcctg gcaggagcgg ttccacgaag
     2821 cgctgggcac cgccgagcgg ggccccggct ggcccgacct cgtggcccgc gcccacggca
     2881 tggccaagcg gatggacctc gccatccagc ggctgaccgc cgagaaggac gccctcgcgg
     2941 gcgagctgaa ccgttcagcc cagggcgccc gcgccctcaa gggctacaag ccctcctgaa
     3001 ttccaaacca ccgccccgcg ttcaggcgct cagatcagcc acgacctgcc ggatcaccac
     3061 atcccagtcg ccggggacag gttgccgata gatccgcagc gtgggatacc aggggctgtc
     3121 gtcccggtcc agcatccagc ggaaatccgg tgtgtaggtc accaggagca gcgtgggtat
     3181 gcccagggcg cccgccaggt gcgccagggc cgtgtccacg gtgatgacca ggtccatgcc
     3241 ggtgagcgcg taggccgtgt cggaaaacga tgtcagcagg ggcgccaggg acacgtagtc
     3301 cggcaggggc ggaacgtcgg tgcggcccat ctggaacccg tgccaggcca cgccggggag
     3361 cgccccgagg ggctccaacc gcgcggcctg gatcgagcgc tccgcgtccc tggcgtgccc
     3421 ggagaaaccc gcccaggcga ggccgatgcg gaccttcccc tcggaggcgg ccagggccgc
     3481 ggcgatgggc tcggcgttgg ccacctgccg gggcacgccc agatagggga tctctgaagg
     3541 aatggtttcc aggctcgtct ggaacacagc tggcagcgag tacagcgaca cctgcaggtc
     3601 gaaagacggc aggggcatgc cctgggggac cacctggtcg atgcccgcgc aggtggtcac
     3661 gaggtaggcg agctggggct gcaccagcag cacgaccctg cccccccggg ccttcaccag
     3721 cggcaggtag cgaatgagca tcagcgtgtc cccgaggccc tgctcgtagt gcacaaggag
     3781 cgtcctcccc tcgaaggact cgccctgcca acggggctcg gtgaacgtgc gctcggggcc
     3841 gacgcagcca ggcacgtcga ggcgcgcctc ccattcctgc cagccctggg gcatcacccc
     3901 ccgcagcagg ttctcgaaac cggcctcgaa caccaggtac ttcgagtcag gatcgaagcg
     3961 gcggaagcgc tcgatctcgg cgtggaattc ctcccactgc ccctggccgt agtggacctg
     4021 gcccagatac tggtgcgctg cgaggttggc gggctccagg tggatcacct gttgcaggat
     4081 ggcccgcgcc tcgatgggat ccacctgggc caggcggccc ttcgcgaggg cgaggagcgc
     4141 gtccacccgg cccggcgaaa gcgacaggac ctggcgcagc aaagtctccg cctcgaccca
     4201 ccgtccctgg cgctggtgga ggctcgcgcg gtggaagagc gcagacggct ggcggggctg
     4261 cagggtgagt gccttgtcgc aggcagccag ggcttcctcg acccgctgga ggctcaacag
     4321 aagtcccgcc aggtcggccc aggcgagggc atccgagggc tcagcctcga ggtagcggct
     4381 gaacgcctcg acgacttcct ccgggccgcc atgggcgagc cgatcgcgga ccttggctag
     4441 cagtgcggcg gcagctggct tcacgcatca ccctcctgat caaatcatgc cctcaattcc
     4501 acctggaggg cggtggtcag atcaggcggc tcgtcctgct agatgccgct caggctggaa
     4561 ctggcggagc gcatctggct gagggtggct tccatcatgt cgaactgcgc cttcagggcc
     4621 gccttgcgct tgtccaggag cacctggccg gattcgatcc gctgggtgag gctcttgttc
     4681 tgctcgtcga ggctcgtgcg cgtggtctcg atggtgcccg aatacgatgt gagacccgcg
     4741 atcaggtcct ggagcttctg gccgatgccc cggctcagcg tcaaggtgcc ggtgcccgaa
     4801 cctgtcaccg ccaggttgag cccttcgagg ggacttcccg tgggtccctg cagggtgccg
     4861 ttgacacccg agagccccga gtaggtgacg ccgttgtaag tcagcgagcc gctgatggca
     4921 ccgcccgccc cgtacgtcag gtcgaagtcg accgcgcccg tctgggtggc cgaggtgccg
     4981 ctcgagaagg agacgttgcc gttggtggag gttcccgaga aggagaagac acgtttgacc
     5041 gcatcgggat ccttgtccag ggccgcctgg aaggccgtga catcgaggga cagcgtgccg
     5101 tcgatggccg tcttgatgcc gagttccgcg ccggacttgt agagggccga ggccgagagc
     5161 ccgtccgggt tgccgttcag ggcggcccgg acctggttga tgacggaacg cgcggtgctg
     5221 tcgcccgtga gggccccagg tacgacctcc ccgtcgctgc ccttcacggc ggtcgaagcg
     5281 tccttgtaga ccttcagcag cgcgttgaac ttggtcagaa cgtcctgcat gcccgcggtg
     5341 gcggcgctct tgtcctgggc caccgtgagg gtggtggcgt tcgtggcgtc gcccttgcgc
     5401 agcgtgaacg tgacaccgtc cacggcatcc ttcacggtgt tggtcttccg ggtgagctgc
     5461 acgccgttga cggagaacac cgcatcctgg gcgatgccgc tgcctgcaga actcagtccg
     5521 ccggacaggt cgccgggcga ggcgatggtg cccgtgagcg tgcccgcggc gatgccgagc
     5581 gaggccacca cggtggtgtc ggtggtgcct gcgtcctcgt tcttgatggc ggccagccgc
     5641 accacgccgc cggtggtgcc agtgccggtc tccttggccg tgagaatgag ctgatagggg
     5701 ttggcccccg agccggaatt gaccaccgtg gccgtcacac ccgcgcccga ggcgttgatg
     5761 gcgtctcgca ggccgttgag gctgttgttc gtgagcttga aggccttgac caccccgtcc
     5821 gtgccctgca cggcgaagct gccgttcgtg ctggtgagga tggccgcatt gggatcggcc
     5881 accgccatgt tggtcggcac cccgccggac atgaccggac ccagctgccc cttggtggcc
     5941 acgttggcga ccttgacctc ataactgccg ccgaccgccc cggtggcggt ggcggtgacg
     6001 aaggtggcat tcgaatccgt gctcgacacg gtgcgggcgt tcagcttgtc gtagaacgcg
     6061 gccatgctca ccgacagcga cgacatcgac aggcgcatgg agttcagtgc cgccgaacgc
     6121 tgggtgttca gggtctgccg gtccttgagg cgctgcaccg gcaggccatc ccgctccatg
     6181 atcgcctgga tcagcgcatc cgtctggaga cctgaagtca cgccctggaa actgagtgat
     6241 gacgccatga tccacctctc ttctgcagca aaggctcctt tcggagcctc agccttcttc
     6301 atccatcagg atcccagagg catccttggg attgtccagt gctctcagcc gccgggccat
     6361 ttccaggatc tcctccgagg gcacttgccg gatggtctcc tgggtgaccg gatcaatgat
     6421 cttgaatgtg tagctgcccg tttcctgatc cacaccaaac ttcaggctcg aggacgatcg
     6481 ctggaggaac gcctccacac tcttcgtcgc cgcctcgagg gcggggccgg acgcacttgc
     6541 actccgtgga tccacggcgg gccgggattc gacgggtcgg cttggcttgg gcttgggtga
     6601 ggctggaaca gctgag
//
LOCUS       DATGWW010000671         4765 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_400404, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000671 DATGWW010000000
VERSION     DATGWW010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4765
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400404"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..986)
                     /locus_tag="VK150_09760"
     CDS             complement(<1..986)
                     /locus_tag="VK150_09760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31637.1"
                     /translation="MVIRATPKPVVPLVPAPATTGAPIPAQVRVPVIDGAAAPALPLP
                     ESEPLEGTIEPERLATVEKEKRLEVFSKPGGLDAVIEAITIMALKHKPDVTTDRGRKA
                     LASVAYKIAQCKTRLDDAGKELVDDLKALPKAVDANRKAMRDRLDALKDRVRKPLTDW
                     EADQERQRQFVADIQVTPMQLQGAPAALIQESIEGLKARDLSQAPDWAEEALRAQQLA
                     LKDLEEMLAARKKADADAAELARLREAQAERERQEAEEKRLREVAENARREAEAQAQR
                     EKDEAQRKTREAQEAAARAEQAQKDAEADAEKARKEADAKAEAAVAAERQRQA"
     gene            complement(986..1660)
                     /locus_tag="VK150_09765"
     CDS             complement(986..1660)
                     /locus_tag="VK150_09765"
                     /inference="COORDINATES: protein motif:HMM:NF021128.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaJ viral recombinase family protein"
                     /protein_id="HLP31638.1"
                     /translation="MTPFAQRIISVTQGTPEWKAARAGKVTATRTKDVIAKGKGNAES
                     ASRADLRMTLVCETLTGEPEEEGFVSKEMLRGTEMEPFARAAYEASEGVMVDQVGMVL
                     HPNDPRCAASPDGLVNWDGTNAPEGLIEIKAPKTKTHIGYIEAGVVPSEYQPQMLWQM
                     ACTGAQWVDFVSYDPRLPEALQLFIIRFHRDEARIQEMEREVSRFLDEVDATANRLKQ
                     IADEAA"
     gene            complement(1657..2433)
                     /locus_tag="VK150_09770"
     CDS             complement(1657..2433)
                     /locus_tag="VK150_09770"
                     /inference="COORDINATES: protein motif:HMM:NF016302.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ERF family protein"
                     /protein_id="HLP31639.1"
                     /translation="MSDPVIEGTSALQTLPAREPMPLSALSSDPTQRLLEMAIQSGAS
                     MDMLERLMALQERKEKEDARKAFAAAMAAFKSNPPRLTKNCLVDFTSQKGRTHYRHAD
                     LEEVATPIAQAMAPHGLSFRWSTKQQNNRIFVTTILEHCMGHREELTLEGSPDESGNK
                     NNIQAVGSTITYLERYGLLAITGMAVKGQDNDGAGATSIPRAITEACEQIAKAESIQA
                     LQKIYTEAYKKAGNSKAAQAELITAKDQRKAELSAKEEKK"
     gene            complement(2430..2678)
                     /locus_tag="VK150_09775"
     CDS             complement(2430..2678)
                     /locus_tag="VK150_09775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31640.1"
                     /translation="MCAPIPDLGPEGQLIMSAYLMEYAKATPDPLLLEELLGKVRLAH
                     LRQQSRTNIIAAAPRRQMDPALAAILRPVSPHLKGIAQ"
     gene            complement(2678..3034)
                     /locus_tag="VK150_09780"
     CDS             complement(2678..3034)
                     /locus_tag="VK150_09780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31641.1"
                     /translation="MHEQDRPVPQAEAPATAAPALSLAHPSQARSVRPTVRINLGFLD
                     GLAYPRSPKEYQFYVSANRGSFTGWCKAPISGVPAEIWTLDHEQAKAHPYVQTMIALA
                     TEDLNENIRKAFEEVG"
     gene            complement(3273..3349)
                     /locus_tag="VK150_09785"
     tRNA            complement(3273..3349)
                     /locus_tag="VK150_09785"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3313..3315),aa:Ile,seq:cat)
     gene            complement(3570..4124)
                     /locus_tag="VK150_09790"
     CDS             complement(3570..4124)
                     /locus_tag="VK150_09790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31642.1"
                     /translation="MVHFLLVLPALVSAPKPNIGAPVELKGVRMGMTMDEVVAAINAR
                     NETFQPETERKGATAEFTEFGLPIAGVESPYVTYDFVEISGTLRLARIIAYFDASSFA
                     SIQTGFLQKYGLPSSKVEPFHTKGGLKTTSRVCTWKRLDGTIILTERKFKLDQGRLDL
                     VSPVLWRSYMAEWSKWSDKQSSDI"
     gene            complement(4127..>4765)
                     /locus_tag="VK150_09795"
     CDS             complement(4127..>4765)
                     /locus_tag="VK150_09795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31643.1"
                     /translation="LPIRNPVDLNRKVLRPAPTPATDGLQRVRRDRDPATVSESCEAG
                     PVGGGEGGEECHAPKVDIMYRSVKDCPPIHFVYTGNNQGMAETWTKKDLFCQWLDEAM
                     PILGVTSRMAVAPYIGLGPNSIKKYTAPSNTTHKPGDAACKKLGDILGRDYRVLLDDP
                     GVAPAGVSQEVWHGADPDLRAFAVAIFNEAKNLSPQQRKAILEFVRASSNKR"
BASE COUNT          694 a         1460 c         1645 g          966 t
ORIGIN      
        1 gcctgcctct ggcgctcggc agccacggcg gcctcggcct tggcgtcagc ttccttccga
       61 gccttctcgg catcggcctc ggcatccttc tgggcctgtt cggcgcgggc ggcggcttcc
      121 tgggcctcgc gggtcttgcg ctgggcctcg tccttctccc gctgggcctg ggcctccgct
      181 tcccggcggg cgttctctgc gacctcgcgg aggcgcttct cttccgcttc ctggcgctcg
      241 cgctcggcct gggcctcccg gaggcgggcc agttcggcgg cgtcggcatc ggccttcttc
      301 cgggccgcca gcatctcctc caggtccttg agggcgagct gctgggcccg gagggcttcc
      361 tcggcccagt cgggggcctg gctcaggtcc cgggccttta ggccctcgat ggactcctgg
      421 atcagcgcgg cgggtgcgcc ctggagctgc atgggcgtga cctggatgtc tgccacgaac
      481 tggcgctggc gctcctggtc ggcctcccag tcggtcaggg gcttgcgcac ccggtccttc
      541 agggcgtcca ggcggtcccg catggccttg cggttggcgt ccacggcctt gggcagggcc
      601 ttcaggtcgt ccaccagctc cttcccggca tcgtccagcc gggtcttgca ctgggcgatc
      661 ttgtaggcga cggaggccag ggccttccgg ccccgatccg tggtgacgtc cggcttgtgc
      721 ttgagggcca tgatggtgat ggcctcgatc acggcatcca ggccgccggg cttggagaag
      781 acctccaggc gcttttcctt ctcgacggtg gccaggcgtt cgggctcgat ggtcccttcc
      841 aggggctcgg actccgggag gggcagggca ggggcggcgg cgccgtcgat cacggggaca
      901 cgcacctggg cgggaatggg ggccccggtc gtggccggcg cgggcacgag ggggaccacg
      961 ggcttggggg tggcgcggat gaccattagg cggcctcgtc cgcgatctgc ttgagccggt
     1021 tcgcggtcgc gtccacctca tccaggaacc gggaaacctc gcgctccatc tcctggatgc
     1081 gggcctcgtc gcggtggaac cggatgatga agagttgcag ggcctcgggg agcctggggt
     1141 cgtaggacac gaagtccacc cactgggccc cggtgcaggc catctgccag agcatctgcg
     1201 gctgatattc ggatgggacc acgccggcct cgatgtagcc gatgtgggtc ttggtcttcg
     1261 gggccttgat ctcgatcagg ccctccgggg cgttggttcc gtcccagttc accagcccgt
     1321 ccggggaggc ggcgcagcgg ggatcgttgg gatggagcac catgcccacc tggtccacca
     1381 tgacgccctc ggaggcctcg taggctgcgc gggcgaaggg ctccatctcg gtcccacgga
     1441 gcatttcctt gctcacgaag ccctcttcct cgggctcccc ggtcagggtc tcgcacacga
     1501 gggtcatgcg cagatcggcg cgagaggcgg actcggcgtt gcccttgccc ttggcgatga
     1561 cgtccttggt ccgggtggcc gtgaccttcc cggcgcgggc ggccttccac tccggcgttc
     1621 cctgggtcac gctgatgatt cgctgtgcga acggcgtcat ttcttctcct ccttcgcgct
     1681 cagctcggcc ttgcgctggt ccttggcggt gatgagttcg gcctgggcgg ccttgctgtt
     1741 gccggccttc ttgtaggcct cggtgtagat cttctggagg gcctggatgc tctcggcctt
     1801 ggcgatctgc tcgcaagcct cggtgatggc gcgagggatg gaggtcgccc ctgcgccgtc
     1861 gttgtcctgg cccttgacgg ccatcccggt gatggcaagg agcccgtacc gctccaggta
     1921 ggtgatcgtg ctgccgacgg cctggatgtt gttcttgttg ccggattcgt caggagaccc
     1981 ctccagggtc agctcctcgc ggtgccccat gcagtgctcc aagatcgtcg tgacaaagat
     2041 ccggttgttc tgctgcttcg tggaccaccg gaacgacagg ccgtgggggg ccatggcctg
     2101 ggcgatcggc gtggcgacct cttccaggtc ggcgtggcgg tagtgggtcc ggcccttctg
     2161 gctcgtgaaa tccaccaggc agttcttggt cagacggggc gggttggact tgaaggcggc
     2221 catggcggcg gcgaaggcct tgcgggcatc ctccttctcc ttccgctcct ggagggccat
     2281 gaggcgctcc agcatgtcca tgctggcccc ggactggatg gccatctcaa ggaggcgctg
     2341 ggtggggtcg gaggacagag cggagagggg catgggttcc ctggccggga gggtctggag
     2401 ggcggacgtg ccctcaatca cggggtcgct cactgggcga ttcctttcag gtggggggaa
     2461 acgggacgga ggatggcggc cagggcgggg tccatctgcc ggcgcggggc ggcggcgatg
     2521 atgttggtcc ggctctgctg gcgcagatgg gcgaggcgca ccttgcccag gagctcctcc
     2581 aggaggaggg gatcgggcgt ggccttggcg tactccatga ggtaggcgct catgatgagc
     2641 tggccctcag gcccgaggtc ggggatcggg gcgcacatca gcccacctcc tcgaaggcct
     2701 tgcggatgtt ctcgttcagg tcctccgtcg ccagcgcgat catggtctgg acgtagggat
     2761 gggccttggc ctgctcgtgg tccagggtcc agatctcggc cgggacgcca gagatggggg
     2821 ccttgcacca gcccgtgaag gagccacggt tggccgagac gtagaactgg tattccttcg
     2881 ggctccgggg gtaggcgagc ccatccagga acccgaggtt gatccggaca gtgggcctca
     2941 cgctgcgggc ctgagacgga tgggcgaggg acagcgcggg ggctgcggtg gccggggctt
     3001 cggcctgcgg aacgggacga tcttgctcat gcacacgtcc tccttggcgc cgtgatggcg
     3061 cgggttgggg accccgacat ggggtcgaag atggtattgg gttgtgggat tggcgcctgg
     3121 cttcactgtt ggccaggcca gcgctcattc acagaccagg atcctggcga gctactggtc
     3181 cccttgcggg ggattgtttc ccccgtctgc gagctggaca tcgcagcgat ttagccccca
     3241 ggcctcatga ttggtccctg ggcggggaag agtggtggcg cgggccggat tcgaaccggc
     3301 ggcgtgggga ttatgagacc cctgttctac ctgactgaac taccgcgcat cggttgagaa
     3361 agatctggcc ccgcagccat gaacccccag gacagaaaaa gtggccccga agccacctgg
     3421 gggatcttgt cggctacttc atgcgggcct cctggaaagg ggaaggtgct gctgtgtatt
     3481 taaggtagac aatatgtatc gccgcgtcaa ggccccggat caaaaaaaaa tgccccggcg
     3541 aaccggggcg cgtctcgaat tggctaagtc taaatatctg aggactgttt atcgctccac
     3601 ttcgaccact cagccatgta actcctccac aagactggtg aaaccaggtc cagcctgccc
     3661 tggtcgagct tgaattttcg ctccgtcagg atgatcgttc cgtccagtct cttccatgtg
     3721 cataccctac tggtggtctt gagcccacct ttggtatgga agggctccac cttcgatgaa
     3781 ggaaggccgt atttctggag aaatcccgtc tgaatgctgg cgaaagatga ggcgtcgaaa
     3841 tatgcaatga ttctcgcaag gcgcaaggtt ccgctgattt ccacgaaatc gtaggttacg
     3901 tacggagact ccacgccagc gattggaagg ccaaattcgg tgaattccgc tgtcgctccc
     3961 ttgcgctcag tttccggctg gaaggtctca ttcctggcgt tgatcgcggc gaccacctca
     4021 tccatggtca tgcccatgcg cacgcccttg agttcgaccg gggcccctat gttcggcttg
     4081 ggggctgaga ctagggccgg aaggaccagc agaaagtgga ccatgcctac ctcttgttgg
     4141 atgaagcgcg aacgaattcc agaatcgcct tgcgctgctg aggcgaaaga ttcttggcct
     4201 cattaaagat ggcaaccgcg aacgctcgga ggtcagggtc cgctccgtgc cacacctcct
     4261 gggatacgcc ggcgggggca acgccgggat catccagcag cacccggtag tcccggccca
     4321 ggatgtcgcc tagcttcttg caggcggcat cacctggctt gtgggtcgtg ttgctggggg
     4381 ccgtgtactt cttgatgctg ttcggcccaa ggccgatgta gggcgcaacg gccatccggg
     4441 atgtgactcc aaggatgggc atggcctcgt ccagccattg gcagaagagg tcctttttcg
     4501 tccaagtctc agccattccc tgattgttgc ccgtgtagac aaaatgtata ggtggacagt
     4561 ccttgacaga ccgatacatt atgtctacct ttggggcatg gcattcctct ccaccctcac
     4621 ccccgccaac tgggcccgcc tcgcagctct cgctgacggt ggcaggatcc ctgtcacggc
     4681 gaacacgctg aaggccatcc gtggcgggcg taggcgctgg acggaggacc tttcgattga
     4741 ggtccaccgg gttacggatg gggag
//
LOCUS       DATGWW010000672         2462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_133215, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000672 DATGWW010000000
VERSION     DATGWW010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133215"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1981)
                     /locus_tag="VK150_09800"
     CDS             complement(<1..1981)
                     /locus_tag="VK150_09800"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HLP31644.1"
                     /translation="MSLRFATEPPSSRRLLGRQDPQDLLPRRMPWIMGAMAFWALLIL
                     LRLVWLQGIEHKRYRAKADQQHTTVVPVPPIRGELRDRRGEPLAISIKVESLFADPRV
                     FYPDYRAGRGEERLWGNPDRKFASEVAAKLAPILEQTRGQVLDKLLRKKTFVYLERHL
                     PPMKVAAIRALNLDGIEFQPESQRFYPRGSLAAQIIGFTNIDGLGQLGIEQTYDKQLM
                     GVKGELIAPRDAHGKLLILQENYSQVPVNGASLQLSLDASIQHIVEDALEEGVRLSRP
                     RTAYAVVVDPQTGEILAMAGTPTFDPNHILPKKFRNRAESELSNAEREELRRELERQK
                     AARKVHPVEDVYEPGSTMKIFTAAIALEERKVRLGERIDCLGGRWLYSPKVPPITDTH
                     HHGVLSFEEILWQSSNVGAAKIGIRLDPAVHYQYLRKFGFGDATGLNFPGESAGRMIA
                     PDRWSVPTQYTFSYGYGLNTTPLQILMAGCALANGGKLMQPILVQRIYNDKGLLLKEF
                     KPTVRGQVLTEETANLMKETLKGVITQGTGKRAKLDNGVDAFGKTGTSRKLIDGKYDP
                     RRHFASFMGFFPADKPQYGVLVMLDDPAGDTTGGDVAAPLFKRIGDGILRFRETSPDP
                     DREADLKLSLRDWPVSETDEAAVHVERGRVPDLTGL"
     gene            complement(2038..2403)
                     /locus_tag="VK150_09805"
     CDS             complement(2038..2403)
                     /locus_tag="VK150_09805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31645.1"
                     /translation="MATGTLPNASSTRMVESEGILRMLLLVLALAMPLGTLAYLKIQS
                     TRMSYAMGEIKERIRKEEEFQRKLMLERSRYQREEEVQVYAQKAGLQPRKQGHLIRRS
                     FTAEDQRIAKLRPVSSEAL"
BASE COUNT          345 a          794 c          894 g          429 t
ORIGIN      
        1 tcaggcctgt gagatccggc acccggccgc gctccacgtg cacggcggcc tcgtccgtct
       61 cgctcacggg ccagtcgcgc agggagagct tgaggtcggc ctcgcggtcc ggatcgggcg
      121 aagtctcgcg gaagcgcagg atgccgtcgc cgatgcgctt gaagagcggg gccgccacgt
      181 cgccgccggt ggtgtcgccc gccgggtcgt ccagcatcac gagcacgccg tactgcggct
      241 tgtccgccgg gaagaagccc atgaaggagg cgaagtggcg ccggggatcg tacttgccgt
      301 cgataagctt gcggctggtg cccgtcttgc cgaaggcatc gaccccgttg tcgagcttgg
      361 cccgcttgcc cgtcccctgc gtgatcacgc ccttgagggt ctccttcatg aggttcgccg
      421 tctcctccgt gagcacctgg ccccgcaccg tgggcttgaa ctccttcagc aggagcccct
      481 tgtcgttgta gatgcgctgc acgaggatcg gctgcatgag tttcccgccg ttggccagcg
      541 cgcagccggc cataaggatc tgcagcggcg tggtgttcag gccgtagccg taggagaagg
      601 tgtactgggt gggcacgctc caacggtccg gcgcgatcat gcggcctgcg ctctcgccgg
      661 ggaagttgag ccccgtggca tcgccgaagc cgaacttgcg caggtactgg tagtgcacgg
      721 cgggatccag gcggatgccg atcttggcgg cgccgacgtt ggagctctgc cagaggatct
      781 cctcgaagga caggacgccg tggtggtggg tgtcggtgat gggcggcacc ttggggctgt
      841 agagccagcg cccgccgagg cagtcgatgc gctcgccgag gcggaccttg cgctcctcca
      901 gggcgatggc cgccgtgaag atcttcatgg tcgagccggg ctcgtagaca tcctccaccg
      961 ggtggacctt gcgggcggcc ttctggcgct ccagctcacg gcgcagctcc tcgcgttcgg
     1021 cgttggacag ctccgactcg gcgcggttcc ggaatttctt cggcaggatg tggttcgggt
     1081 cgaaggtggg cgtgcccgcc atggccagga tctcgcccgt ctggggatcc accaccaccg
     1141 catacgccgt gcggggcctg gagagccgca ccccctcctc gagggcgtcc tccacgatgt
     1201 gctggatgga ggcgtccagg ctcagctgca gcgaggcgcc gttcacggga acctggctgt
     1261 agttctcctg caggatgagc agcttgccgt gggcgtcccg cggggcgatg agttcgccct
     1321 tcacccccat cagctgcttg tcataggtct gctcgatgcc cagttggccc aggccatcga
     1381 tgttcgtgaa gccgatgatc tgcgccgcga ggcttccccg ggggtagaag cgctggctct
     1441 cgggttggaa ctcgatgcca tccaggttca gggcgcggat ggccgccacc ttcatgggtg
     1501 ggaggtggcg ttccaggtag acgaaggtct tcttccgcag gagcttgtcc agcacctgcc
     1561 cccgggtctg ctcgaggatc ggcgccagct tcgcggccac ctcgctggcg aacttgcgat
     1621 ccgggttgcc ccagagccgc tcctccccgc gcccggcgcg gtagtccggg tagaacacgc
     1681 ggggatcggc gaagaggctc tcgaccttga tggagatggc caggggctcg ccgcggcggt
     1741 cccgcagctc gccccggatg ggcggcaccg gcaccacggt ggtgtgctgc tggtcggcct
     1801 tggcgcggta gcgcttgtgc tcgatgccct ggagccacac cagccgcaga aggatgagca
     1861 gggcccagaa ggccatggcg cccatgatcc agggcatgcg ccgcggcagc aggtcctggg
     1921 gatcctgccg gcccagcagg cgccgggagc tgggtggttc agtggcgaag cggagggaca
     1981 cgggatggcc ggggctggat ggagcggtga cgaggggcta cagccccagc ctacagccta
     2041 cagcgcctcg gacgagaccg gacggagctt ggcgatgcgc tgatcttccg ccgtgaagga
     2101 gcgccggatg aggtgcccct gcttccgggg ctggagcccc gccttctggg cgtagacctg
     2161 gacctcctcc tcgcgctggt agcggctgcg ttccagcatg agcttgcgct ggaactcctc
     2221 ctccttgcgg atgcgctcct tgatctcacc catggcgtag ctcatgcggg tgctctggat
     2281 cttcaggtag gcgagcgtgc ccaggggcat ggccagggcc agcaccagca gcagcatgcg
     2341 gaggatgccc tcgctctcca ccatgcgggt ggaggaggcg ttcggcaggg ttccggtggc
     2401 catgggggac ctcgttcagg cgagccgctc cgccacgcgc aggcgggcgg accgggaggg
     2461 gg
//
LOCUS       DATGWW010000673         2637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_215281, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000673 DATGWW010000000
VERSION     DATGWW010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215281"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..781)
                     /locus_tag="VK150_09810"
     CDS             complement(<1..781)
                     /locus_tag="VK150_09810"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HLP31646.1"
                     /translation="MELTGAEIIVRFLQDEGVEHLFGYPGGAVLNIYDAIYKQDKVKH
                     VLVRHEQAATHAADGYARSTGKPGVVLVTSGPGATNAVTGIATAYMDSIPMVVITGQV
                     NSSLIGNDAFQEVDSVGITRPCVKHNFLVKDVNELATTLKKAFYIATTGRPGPVVVDV
                     PKDVTAARAAYTHPKKVTIRSYHPTEKGHPGQIKKAVGMMLAAKRPLFYTGGGVILDD
                     ASKALIELVQKLGYPITNTSMGLGAYPATDKQCLGMLGMHGT"
     gene            958..1404
                     /locus_tag="VK150_09815"
     CDS             958..1404
                     /locus_tag="VK150_09815"
                     /inference="COORDINATES: protein motif:HMM:NF024901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HLP31647.1"
                     /translation="MTARLPLRALAPLALLAALAASGTARAELYKWVDDEGNVSYSQD
                     PPPDREATTVAPPPPIPDNPTKPLKLDDVGESTEQKAKREANQKADQDAAKADKQNCE
                     AARRNLEIYQNSRRIQNEKGEVTVLDDTNRAKLIKETQDQIKQFCR"
     gene            1407..1751
                     /locus_tag="VK150_09820"
     CDS             1407..1751
                     /locus_tag="VK150_09820"
                     /inference="COORDINATES: protein motif:HMM:NF013361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylpyruvate tautomerase MIF-related protein"
                     /protein_id="HLP31648.1"
                     /translation="MPLLKVLTNVEVPPDRREGLLAAASRAVAGMLGKPERYVMVTLE
                     TGVPMIFAGSHAPCALLELKSIGLPEDRTAALSQALCDALGPLLQVAPERTYIEFTNA
                     EPHLWGWNAETF"
     gene            1818..>2637
                     /gene="proS"
                     /locus_tag="VK150_09825"
     CDS             1818..>2637
                     /gene="proS"
                     /locus_tag="VK150_09825"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HLP31649.1"
                     /translation="MRASRLLIATVKETPADAEVISHQLMLRAGLIRRLAAGLYTWTP
                     VGLKVLRKVEAIVREEMDRAGAQEVLMPAVQPAELWQESGRWEVMGAEMLRLKDRHNR
                     DFCFGPTHEEVITDFARNELRSYKQLPANFYQIQTKFRDERRPRFGVMRAREFLMKDA
                     YSFHIDEASLKETYQVMYETYSRIFTRLGLQFRAVLADTGAIGGSGSHEFHVLAASGE
                     DAIAYSDASDYAANIEMAEALAPAQPRGAATETMREVDMPKAKTIAELVEQHQVA"
BASE COUNT          478 a          908 c          834 g          417 t
ORIGIN      
        1 aggtgccgtg catgccgagc atgcccaggc actgcttgtc ggtggccgga taggcgccga
       61 ggcccatgga ggtgttggtg atcgggtagc cgagcttctg caccagctcg atcagcgcct
      121 tggaggcgtc gtccaggatc acgccgccgc cggtgtagaa gagcgggcgc ttggccgcaa
      181 gcatcatgcc cacggccttc ttgatctggc ccgggtgacc cttttccgtc gggtggtagg
      241 agcggatggt caccttcttg ggatgcgtgt aggcggcgcg cgcggcggtc acgtccttgg
      301 gcacgtccac gaccacaggg ccggggcggc cggtggtggc gatatagaag gccttcttca
      361 gggtggtggc cagctcgttc acatccttca cgaggaagtt gtgcttcacg cagggacggg
      421 tgatgcccac cgagtccact tcctggaagg cgtcgttgcc gatgagggag ctgttcacct
      481 ggccggtgat caccaccatc gggatggagt ccatgtaggc ggtggcgatg ccggtgacgg
      541 cattggtcgc gccggggccg gaggtgacca gcaccacgcc gggcttgccg gtggagcggg
      601 catagccgtc ggccgcgtgg gtggccgcct gctcatggcg caccagcacg tgcttgacct
      661 tatcctgctt gtagatggcg tcgtagatgt tcaatacggc gccaccgggg tagccaaaca
      721 ggtgttcgac gccttcgtcc tgaaggaaac ggacgatgat ctcggcaccg gtcaattcca
      781 cgtcatctct cccggaaaaa aatgcccgtg gacacgggca ggcttgcgat tggtaagaac
      841 gtgacaaact acttattacg gcgtttcagg tcaagtgcga cgggcactta ccccttgtgc
      901 cctcccccga aagcctgata ataccccgac aattccatga ctcgggagaa ggtcttgatg
      961 actgcacggc tgccgctccg ggcccttgcc cccctcgccc tccttgccgc cctggccgcc
     1021 tcgggcaccg cccgggccga gctctacaaa tgggtggacg acgagggcaa cgtctcctac
     1081 tcccaggacc cgccccccga ccgggaggcc accaccgtgg cgccccctcc gcctattccg
     1141 gataacccga ccaagcccct gaagctggac gacgtggggg agtccacgga acagaaggcc
     1201 aagcgcgagg ccaaccagaa ggcggaccag gatgctgcca aggccgacaa gcaaaactgc
     1261 gaggcggccc gccggaacct cgagatctac cagaactccc gccgtatcca gaacgagaag
     1321 ggggaggtca cggtcctgga cgacaccaac agggccaaac tcatcaagga aacccaggac
     1381 cagatcaagc agttctgccg ctagccatgc cgctgctgaa ggtcctgacc aacgtggagg
     1441 tcccccccga ccggcgggaa gggcttctgg ccgccgcctc ccgcgccgtg gccgggatgc
     1501 tgggcaagcc ggagcgctac gtgatggtga ccctggagac cggggtcccg atgatcttcg
     1561 ccgggagcca cgccccctgc gccctcctgg agttgaagag catcggcctc cccgaggacc
     1621 gcaccgcggc cctgtcgcag gccctctgcg acgccctcgg ccccctgctc caggtggccc
     1681 cggagcggac ctacatcgaa ttcaccaacg ccgaacccca cctctggggc tggaacgccg
     1741 aaaccttctg atacaatccg tcccaacgtt tcagccgggc ccggacacgg gcccgctttt
     1801 tttccgaagg aaaatccatg cgcgcctccc gcctgctcat cgccaccgtc aaggagaccc
     1861 cggccgacgc cgaggtcatc agccaccagc tcatgctccg cgccggcctc atccgccgcc
     1921 tggccgcggg cctctacacc tggaccccgg tgggcctcaa ggtcctgcgc aaggtcgaag
     1981 cgatcgtgcg cgaggagatg gaccgcgccg gcgcccagga agtgctgatg cccgcggtgc
     2041 agccggccga gctgtggcag gagtcgggcc gctgggaggt gatgggcgcc gagatgctgc
     2101 ggctcaagga ccgtcacaac cgcgacttct gcttcggtcc cacccatgaa gaggtgatca
     2161 ccgatttcgc ccgcaacgag ctgcgcagct acaagcagct gccggccaac ttctaccaga
     2221 tccagaccaa gttccgcgac gagcgccgcc cccgcttcgg cgtcatgcgc gcccgcgagt
     2281 tcctgatgaa ggacgcctac tccttccaca tcgacgaggc gtcgctcaag gaaacctacc
     2341 aggtgatgta cgagacctac tcgcgcatct tcacccgcct ggggctccag ttccgcgccg
     2401 tgctcgccga caccggcgcc atcggcggca gcggctccca tgaattccac gtgctggccg
     2461 cctcgggcga ggatgccatc gcgtactccg acgccagcga ttacgcggcc aacatcgaaa
     2521 tggccgaggc cctcgccccc gcgcagccgc gtggcgccgc gacagagacc atgcgcgagg
     2581 tcgacatgcc gaaggcgaag accattgccg aactggtcga gcagcaccag gtcgcca
//
LOCUS       DATGWW010000674         2145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_133504, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000674 DATGWW010000000
VERSION     DATGWW010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133504"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..312
                     /locus_tag="VK150_09830"
     CDS             <1..312
                     /locus_tag="VK150_09830"
                     /inference="COORDINATES: protein motif:HMM:NF014799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HLP31650.1"
                     /translation="EAVSDLDVAVLDLRTLWPLDDDAIAALARRTHRVLVLTEASGTY
                     GPGAELAARVGETCFPWLDAPVLRVGAADTPTPASPPLEAAFLPGPARVRAELDRLLA
                     W"
     gene            316..1275
                     /locus_tag="VK150_09835"
     CDS             316..1275
                     /locus_tag="VK150_09835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31651.1"
                     /translation="MALRAWLLVLLCTFLPAAPKAIWVWETETLRLLDDRAFETRALG
                     LLKAHGFRTLYLYANDYRGRNPVLNEREAYRALLGRLHGAGFRVEALLGSLPLKTWEY
                     VLPERDQPARDMLQHVLDYNAAAAATERFDGVHLDIEPYALDSWNEHTRERLSQLFLT
                     RSKEWVAMVRRAGGDPPRGLTIGAAIPFWYDGFEVAWEGARKPMNAHVQDLYDYVAVM
                     DYRNRAEGPDGIIAHAREELAYGAKLGRPVVLGLETGAAEPAKVTFRHLGPRALAREM
                     AATRRAFDREPAFAGFAIHHLRAWLDLIEPPAAPSATTRADRP"
     gene            1278..>2145
                     /locus_tag="VK150_09840"
     CDS             1278..>2145
                     /locus_tag="VK150_09840"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP31652.1"
                     /translation="MPPHLRRFAASVLVLALCFWVLSEAPRQEGQGAEDGLQASRDLQ
                     ATSQALVAAGKFGEALPLVRKLTEAYPGNHIYLGRLADIHGRLGQWAECAAAWEAYMK
                     VSPTPWEALPGLGDAYLRQGRTRDAVGAFARGLELQPDNPDAVFFLGRAFEHDGQFQK
                     ARATYAKGLRQHPDYTDLRVGLARMTLFTGSALEAQRLAEEAVRRSPASVDARLVLGM
                     ALRSRGDLAGARRELERARALSPDYLDVLQVLGGVAEQQRDVAAARAAYGRILQLDPG
                     HAAARARLAGLPQ"
BASE COUNT          280 a          862 c          717 g          286 t
ORIGIN      
        1 gaggccgtgt ccgacctcga cgtggcggtg ctcgacctgc gcaccctctg gcccctggac
       61 gacgacgcca tcgccgccct ggccaggcgc acccatcgcg tgctggtgct caccgaggcc
      121 agcggcacct acggccccgg cgcggagctg gcggcccgcg tgggcgagac ctgcttcccg
      181 tggctggatg cccccgtgct gcgggtcggc gccgccgaca cgcccacgcc cgccagcccc
      241 ccgctggagg ccgccttcct gccgggcccc gcgcgggtgc gcgcggagct cgatcgtctg
      301 ctggcctggt gagggatggc cctgcgcgcc tggctcctcg tcctcctctg cacgttcctg
      361 cccgcggccc cgaaggccat ctgggtctgg gagacggaga ccctccgcct gctggatgac
      421 cgcgccttcg agacccgcgc cctggggctg ctcaaggccc acggcttccg caccctgtat
      481 ctctacgcca acgactaccg gggccggaac ccggtcctga acgagcgcga agcctaccgc
      541 gccctcctgg ggcgcctgca tggcgccggt ttccgcgtcg aagccctgct gggctccctg
      601 cccctgaaga cctgggaata cgtgctgccc gaacgggacc agcccgcccg ggacatgctg
      661 cagcacgtgc tcgactacaa cgccgcggcc gccgccaccg aacgcttcga cggcgtccac
      721 ctggacatcg agccctacgc cctggactcc tggaatgagc acacccggga acggctttcc
      781 cagctcttcc tgacccgctc gaaggaatgg gtggccatgg tccggcgcgc gggcggcgac
      841 cccccacgag gactcaccat cggcgcggcg atccccttct ggtacgacgg cttcgaggtg
      901 gcctgggaag gcgccaggaa gcccatgaac gcccatgtgc aggacctcta cgactacgtg
      961 gcggtcatgg actaccgcaa ccgcgccgag gggcccgatg gcatcatcgc ccacgcccgg
     1021 gaagagctcg cctacggagc gaagctgggc aggcccgtgg tcctcggcct cgagaccggc
     1081 gcggcggagc ccgcgaaggt gaccttccgg cacctcggcc cccgggccct ggcccgcgag
     1141 atggccgcca cccgccgggc cttcgaccgc gagcccgcct tcgcgggctt cgccatccac
     1201 cacctgcgcg cctggctcga cctgatcgag ccgcctgccg ccccttccgc caccacccgc
     1261 gctgaccgcc cctgaccatg cctccccacc ttcgacgatt cgccgcttcg gtcctggtcc
     1321 tcgcactctg cttctgggtg ctcagcgaag cgccccgcca ggagggccag ggggccgaag
     1381 acggcctcca ggcctcgcgg gacctgcagg cgacgagcca ggccctggtc gccgccggaa
     1441 agtttggcga ggccctgccc ctggtgcgga agctgacgga ggcctacccc ggcaaccaca
     1501 tctacctggg ccggctggcg gacatccacg ggcgcctggg ccagtgggcc gagtgcgccg
     1561 ccgcctggga ggcctacatg aaggtctcac ccacgccctg ggaggccctg cccggcctgg
     1621 gcgacgccta cctgaggcag ggccgcaccc gggacgcggt cggcgccttc gcccggggcc
     1681 tggagttgca gcccgacaat cccgacgcgg tgttcttcct gggccgcgcc tttgaacacg
     1741 acggccagtt ccagaaggcc cgcgccacct acgccaaggg cctgcgccaa cacccggatt
     1801 acaccgacct ccgcgtgggc ctcgcccgca tgaccctctt caccggcagc gccctcgagg
     1861 cccagcgcct ggccgaagag gccgtgcggc gctcgcccgc ctccgtggac gcgcggctgg
     1921 tcctgggcat ggccctgcgg tccaggggcg acctcgccgg cgcccgccgg gagctggagc
     1981 gcgcccgcgc cctcagcccc gactacctgg atgtgctgca ggtgctgggc ggcgtggccg
     2041 aacagcagcg ggacgtcgcg gcggcccgcg cggcgtacgg ccgcatcctc cagctcgatc
     2101 cgggacacgc cgcagcccgc gcccggctgg cgggccttcc ccagg
//
LOCUS       DATGWW010000675         2200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_400784, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000675 DATGWW010000000
VERSION     DATGWW010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400784"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="VK150_09845"
     CDS             complement(<1..285)
                     /locus_tag="VK150_09845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31653.1"
                     /translation="MDSHLPLTSALPLPEGEAGVASAGEGRAAILARLRERIVAFAAS
                     RYAGSQAEDLAQEVLVLIHEKYGHLDRLEDLVPLAFQILRFKLAAHRRKAA"
     gene            352..1116
                     /gene="surE"
                     /locus_tag="VK150_09850"
     CDS             352..1116
                     /gene="surE"
                     /locus_tag="VK150_09850"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: protein motif:HMM:NF001490.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HLP31654.1"
                     /translation="MSERLILLTNDDGLWAPGIATLARVASRFGKVVTVAPDRNRSAI
                     SSALSLHNILRLNQVGEGRFACDGTPVDCVLLAVCEVLGRRPDWVLSGVNHGFNLGED
                     VFYSGTVGAAFEGRLQGARAAAFSIHPTGSLDGAEPWIARFLESWEAMDLPANRIWNV
                     NFPKGEPKGFQLTGQDSRAYHDLVERRTDPRNTPYFWIGGDAGPTYAKAPGSDAEAVF
                     HGFASVTPLRLDLGCPETLARQADFNAAFNGPARKG"
     gene            1120..1392
                     /locus_tag="VK150_09855"
     CDS             1120..1392
                     /locus_tag="VK150_09855"
                     /inference="COORDINATES: protein motif:HMM:NF012911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HLP31655.1"
                     /translation="MQIAFRVQGAVQGVGYRRFAAREAQALALAGWVRNEPDGSVAGE
                     AEGPEAALATFRARLAEGPPFAAVARLDWKALDMRSSLPFPFEIHR"
     gene            1395..1919
                     /locus_tag="VK150_09860"
     CDS             1395..1919
                     /locus_tag="VK150_09860"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF002634.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HLP31656.1"
                     /translation="MAIPAPLTSYVRDVPDFPKAGILFRDITPLLANAEAFAEAVAAM
                     AQPVLTLQPTHVLGLESRGFIFGSALAQKLGVGFVPARKPGKLPMATHSEAYGLEYGN
                     DALEIHTDAFKAGDRVLIVDDVMATGGTAAAAQRLVQRTGAQPVALTVFIELTSLPGR
                     EKVEGLPVFSVLRY"
     gene            complement(1900..>2200)
                     /locus_tag="VK150_09865"
     CDS             complement(1900..>2200)
                     /locus_tag="VK150_09865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31657.1"
                     /translation="AALEPPATGVFNLTDGHPETLAAFTGRLARLVGLPAPAEVAWAE
                     AQGRISPGLLAFLRQSRRVASRRAADLGWSPTLDPEAGLRASLREMGFELSSEAR"
BASE COUNT          300 a          852 c          733 g          315 t
ORIGIN      
        1 cgcggccttg cggcggtggg ccgccagctt gaagcgcagg atctggaagg ccaggggcac
       61 caggtcctcc agccggtcga gatgcccgta cttctcgtgg atcagcacca gcacctcctg
      121 ggcgaggtcc tccgcctggg accctgcata ccgggatgcc gcgaacgcga cgatcctttc
      181 acggagccgg gccaggatcg ccgcccggcc ctccccggcg gacgcgacgc cggcctctcc
      241 ctcggggagc ggcagggcgg aggtcagcgg aaggtgggaa tccatggcac ttcggagtga
      301 attccatcct gccagcgaat gccctccccg ggcacggagt acactggccc catgtctgag
      361 cgcctgatcc ttctcaccaa cgacgacggc ctctgggcac cgggcatcgc cacgctggcc
      421 cgggtggcgt cccggttcgg caaggtcgtc accgtggccc ccgaccgcaa ccgctcggcc
      481 atctcctcgg ccctgagcct gcacaacatc ctgcgcctga accaggtggg cgagggccgc
      541 ttcgcctgcg acggcactcc ggtggactgc gtgctgctgg cggtctgcga ggtgctggga
      601 cgccggccgg actgggtgct ctcgggcgtc aaccacggct tcaacctcgg cgaggacgtg
      661 ttctactccg gcaccgtggg ggccgccttc gagggtcggc tccagggcgc gcgggccgcg
      721 gccttctcca tccaccccac cggctcgctg gacggggcgg aaccctggat cgcccggttc
      781 ctcgagtcct gggaggccat ggacctgccc gccaaccgca tctggaacgt caacttcccc
      841 aagggcgaac cgaaggggtt ccagctcacg ggccaagaca gccgcgccta ccacgacctg
      901 gtggagcgcc gcaccgaccc ccgcaacacg ccctacttct ggatcggcgg cgacgcgggc
      961 cccacgtacg ccaaggcccc cggcagcgac gccgaggcgg tctttcacgg cttcgccagc
     1021 gtgacgccgc tgcgcctgga tctgggctgc ccggaaaccc tcgcccgcca ggccgatttc
     1081 aacgccgcct tcaacggacc cgcccgcaag gggtaggcca tgcagatcgc cttccgcgtc
     1141 cagggcgccg tgcagggggt gggttaccgc cgcttcgccg cccgggaggc ccaggccctc
     1201 gccctggccg gctgggtgcg gaacgagccg gatggctccg tcgccggcga ggcggaaggc
     1261 cccgaggcgg cgctggcgac cttccgggcg cgcctggccg agggaccccc cttcgcggcc
     1321 gtggcacgac tggactggaa ggccctggat atgcgatcct cccttccctt tccttttgag
     1381 atccacaggt agccatggcc attcccgctc ccctcacctc ctacgtccgc gacgtgccgg
     1441 acttccccaa ggcggggatc ctcttccggg acatcacccc cctgctggcc aacgccgagg
     1501 ccttcgccga ggccgtggcc gccatggccc agccggtgct caccctccag cccacccacg
     1561 tgctgggcct ggaatcccgg ggcttcatct tcggcagcgc cctggcccag aagctcggcg
     1621 tgggcttcgt gcccgcccgc aagcccggca agctgcccat ggccacccac tcggaggcct
     1681 acggcctgga gtacggcaac gacgccctgg agatccacac cgatgccttc aaggccggcg
     1741 accgcgtgct catcgtggat gacgtcatgg ccaccggcgg caccgccgcc gccgcccagc
     1801 gcctggtcca gcgcactggc gcccagcccg tggccctcac cgtcttcatc gagctgacct
     1861 ccctgcccgg ccgcgagaag gtcgagggcc tgcccgtctt cagcgtgctt cgctactgag
     1921 ctcgaagccc atctcccgca ggctggcccg caggccggct tcggggtcga gggtgggcga
     1981 ccagcccagg tccgcggcgc gccggcttgc cacgcggcgg ctctgccgca ggaaggccag
     2041 gaggcctggg ctgatgcggc cctgggcctc ggcccaggcc acctccgcgg gcgcgggcag
     2101 ccccaccagt cgggccagcc gtcccgtgaa cgccgccagg gtctccgggt ggccgtctgt
     2161 caggttgaac acgcccgtcg cgggaggctc cagcgccgcc
//
LOCUS       DATGWW010000676         2899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_215804, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000676 DATGWW010000000
VERSION     DATGWW010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2899
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215804"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..276)
                     /locus_tag="VK150_09870"
     CDS             complement(<1..276)
                     /locus_tag="VK150_09870"
                     /inference="COORDINATES: protein motif:HMM:NF014066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HLP31658.1"
                     /translation="MTRLRCWRPTLLILIVLVLWGSSCLAAGRGLFYVVRSPLTTAYL
                     FGSVHLGRSDFYPLPPQVEQAFARSDLLVLEVDPAAMSSAAVRQQMEA"
     gene            complement(273..761)
                     /locus_tag="VK150_09875"
     CDS             complement(273..761)
                     /locus_tag="VK150_09875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31659.1"
                     /translation="MKIPAVLIAGILSLLLAASASAATLSASGFRFWLPEQWKRAVTG
                     TSVTAAGGKEVAAFFVGARSLADAEGAARRVAGPMIGSMVWGTPEEVTINRMEGYSLK
                     GRGVIAGSNLPVKLSVIAVQHGRRVFVACFAVASASQDAWAPTIRRIVASIAPIGTGG
                     AR"
     gene            885..1106
                     /locus_tag="VK150_09880"
     CDS             885..1106
                     /locus_tag="VK150_09880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31660.1"
                     /translation="MKEITLVLPELGMIAWTRIMLGAGAALLLGERLDREQRKAVGWT
                     LFAVGAASTIPIAMLLFGSRRRGASAAQG"
     gene            complement(1125..1418)
                     /locus_tag="VK150_09885"
     CDS             complement(1125..1418)
                     /locus_tag="VK150_09885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31661.1"
                     /translation="MSPQTARTLLVAAAIALVIAFSALSPALSFLLAVVAALLALAPA
                     FRAPRLARWWGVALLALALVCAASWLASFRQDQSGYRKAAGTPPATTPTGPSR"
     gene            complement(1538..2503)
                     /locus_tag="VK150_09890"
     CDS             complement(1538..2503)
                     /locus_tag="VK150_09890"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLP31662.1"
                     /translation="MVKTLRLILTLTALLCFTTLARAEAPQAQTQVPGYYRMMLGQFE
                     VTALFDGALELDTKLLHNTSPTELNKLLARMFVGNPKMQTAVNAYLINTGKNLVLVDA
                     GASKLFGPSLGFILQNMKAAGYEPSQVDTVVITHLHADHVGGITQADGGLVFPKARIL
                     VDKADHDFWLSTAVADKMPKNKQFFFKMARDAAAPYQKAGLWQTFVAGDTLVPGIRAE
                     KADGHTPGHTAFAVESDGKKLLIWGDLVHAHAVQFARPGVSIEYDVDQKQAIATRKRI
                     FKATAESKALVAGMHLPFPGIGHVRAEGKGSYSWVPIEFSPLPQR"
     gene            complement(2651..>2899)
                     /locus_tag="VK150_09895"
     CDS             complement(2651..>2899)
                     /locus_tag="VK150_09895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31663.1"
                     /translation="VHGQPQRTLYEADGFLVFARGERGLVAINKTAEWQHLVVNTWGL
                     ARGWYRCQLHGHEMLLGGDTFGFAIPPREAQMWLCSGQ"
BASE COUNT          502 a          969 c          996 g          432 t
ORIGIN      
        1 cgcctccatc tgctgccgga ccgcggcgga ggacatggcg gccggatcga cctccagcac
       61 cagcaggtcc gagcgggcaa aggcctgctc cacctgcggc ggcagcggat agaagtcgct
      121 gcgccccaga tgcaccgacc cgaacaggta ggcggtcgtc agcggagacc ggaccacgta
      181 gaacagaccc cggccggcgg ccaggcagga tgagccccac aggaccagga cgatcaggat
      241 cagcagcgtc gggcgccagc agcgcagtcg ggtcatcgcg cccccccggt accgatcggt
      301 gcgatcgagg cgacgatccg gcggatggtc ggggcccagg cgtcctggga ggcgctggcg
      361 actgcaaagc aggccacgaa gacccgccgg ccgtgctgga ccgcgatcac cgacagcttg
      421 accggcaggt tgctgccggc aatcaccccc cgtcccttca gggagtagcc ctccatccgg
      481 ttgatcgtca cctcctccgg cgtgccccag accatactgc cgatcatcgg cccggccacc
      541 cggcgggcgg ccccctcggc atcggccagc gagcgcgccc cgacgaagaa ggccgccacc
      601 tccttgcccc ccgcagcggt gacggaggta ccggtcaccg cccgtttcca ctgctcgggc
      661 agccagaagc gaaagcccga ggcggagagc gtggcggcgg atgccgacgc ggccaggagc
      721 aggctcagga tgcccgcgat caagactgcc ggtattttca tggcactcct cacggcagcg
      781 cccgcggcgc cgcccggatt ttcaggggtc gatcgaaacc tgcgcagccc cggctgctat
      841 acttgaaggg aaggggactg atcacaccag caccaggagg cattatgaag gagatcacac
      901 tggtactgcc ggaactgggg atgatcgcct ggacccgcat catgctgggc gccggggcgg
      961 ccctgctgct gggcgagcgg ctcgaccgcg agcagcgcaa ggcggtcggc tggacgctgt
     1021 tcgccgttgg cgcggcctcc accatcccga tcgccatgct gctgttcggc tcgcgccgcc
     1081 ggggcgcaag cgccgctcag ggatagcgcg acccggccag gcggtcagcg agacgggccg
     1141 gtgggcgtgg tcgccggggg cgtgcccgct gccttccggt agccggactg atcctggcgg
     1201 aaactggcca accaggacgc ggcgcagacc agcgccagcg ccagcagcgc caccccccac
     1261 caccgggcca gccggggcgc ccggaaggcc ggggccagcg ccagcagggc cgccacgacc
     1321 gccagcagga acgaaagcgc cggagagagg gcgctgaagg cgatcaccag tgcgattgcc
     1381 gcggccacca gcagggtacg ggccgtctgt gggctcatgc gggcctccat aagaggtgcg
     1441 gattcaggga aattctagcg aaaatgccgg cccggcgcca ccaaatagat cgggcgccgg
     1501 gccggcaggt gaggggacgg gcggggatgg tgcgggacta gcgctgcggc agcgggctga
     1561 actcgatcgg cacccagctg tagctcccct tgccttctgc ccgcacatgg ccgatgccgg
     1621 ggaacggcag gtgcatcccg gccaccaggg ccttgctctc ggccgtggcc ttgaagatcc
     1681 gcttgcgggt ggcgatggcc tgcttctggt ccacgtcgta ctcgatcgag acccccggcc
     1741 gggcgaactg caccgcgtgg gcgtgcacca gatcacccca gatcaggagc ttcttgccgt
     1801 ccgactccac ggcaaaggcg gtgtgccccg gggtgtggcc atcggccttc tcggcccgga
     1861 tgcccggcac cagcgtgtcc cccgccacaa aggtctgcca caggccggcc ttctggtagg
     1921 gggcggccgc atcgcgggcc atcttgaaga agaactgctt atttttcggc attttgtccg
     1981 ccaccgcggt ggagagccag aagtcgtgat cggccttgtc caccaatatc ctggccttgg
     2041 ggaagaccag cccgccgtcg gcctgggtga tccccccgac gtggtcggcg tgcaggtggg
     2101 tgatcaccac cgtatcgacc tgcgacggct cgtagccggc cgccttcatg ttctgcagga
     2161 tgaagccgag cgacgggccg aacagcttcg aggcgccggc atccaccagc accaggttct
     2221 tgccggtgtt gatcaggtag gcgttgaccg cggtctgcat cttggggttg ccgacgaaca
     2281 tccgggccag cagcttgttc agctcggtcg gcgaggtgtt gtggagcagc ttggtgtcca
     2341 gctccagcgc accgtcgaac agggcggtga cctcgaactg gccgagcatc atccggtagt
     2401 agcccggcac ctgggtctgg gcctgggggg cctcggcccg ggcgagggtc gtgaagcaca
     2461 ggagagcggt gagggtcagg atcaggcgca aggtttttac catgggtatt cctcctggga
     2521 tggtttcatg tacacatgca agggcctggc gactggccag ggatttttcc gagtggaact
     2581 atgtatcctt gcagattcgc agggtcaatt cgaatttgca agaataaata cacattctag
     2641 aagaaccgga tcattgacct gaacacagcc acatctgcgc ctcgcggggc gggatggcga
     2701 agccgaacgt atcgcccccc agcagcatct cgtggccgtg cagctgacag cggtaccagc
     2761 cgcgggccag cccccaggta ttgacgacca gatgctgcca ctcggcggtc ttgttgatcg
     2821 ccaccagacc ccgctcgccc cgggcaaaga ccaggaagcc gtccgcctcg tagagggtgc
     2881 gctgcggctg tccgtgcac
//
LOCUS       DATGWW010000677         1765 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_401057, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000677 DATGWW010000000
VERSION     DATGWW010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401057"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..817
                     /locus_tag="VK150_09900"
     CDS             <1..817
                     /locus_tag="VK150_09900"
                     /inference="COORDINATES: protein motif:HMM:NF024798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HLP31664.1"
                     /translation="ESAYGTYRGDLPVLGSLATLAYEGRRGAFFEAELIAALKIVQGG
                     HVDRFVGSWAGASGHTQFMPSSWEKFAVDFDGDGKKNLWGDDPSDALASTANYLRHWG
                     WTKGQPWGVEVTLPEGFDYDQTTERVVKPVSEWQAMGVRTVAGADLPDHGPGSILLPG
                     GHRGAAFLIWPNFQVIEKYNTADAYVVAIGSLSDRLRGEPAIQSGWPRELRALTLEER
                     RELQDLLTRAGFDAGGVDGRMGPKTVAAVKAFQKARGMVPDGYPSLEVLDRLR"
     gene            complement(955..>1765)
                     /locus_tag="VK150_09905"
     CDS             complement(955..>1765)
                     /locus_tag="VK150_09905"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013362.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HLP31665.1"
                     /translation="TYGRDITTAVESVQAQEPPLDLTLRPGFPHPEGELLPTGSLRLR
                     TPGQLSTLPGYAEGGWWVQDAAAALPAQLLQPQPGEHILDLCAAPGGKTLQLAASGAH
                     VTALDISAPRMARVQANLARTNLNATLITADALHWQPEALFDAILLDAPCSATGTIRR
                     HPDLPFVKDGSELPALATLQSQLIDRALTWLKPGGRLVFSTCSLLPEEGEAQLAAALE
                     RHAGLTVERPDIPGIDPTWWTPEGALRLRPDYWADKGGMDGFFLARLRRPA"
BASE COUNT          257 a          449 c          759 g          300 t
ORIGIN      
        1 ggaaagcgcc tatggtacct atcggggcga tctgccagtg ctcgggtcgc tggccacgct
       61 ggcctatgag ggacggcggg gggcgttctt cgaggcggag ctgatcgcgg ccttgaagat
      121 cgtgcagggc ggacatgtgg atcggtttgt cgggtcctgg gcgggggcgt cggggcacac
      181 gcagttcatg ccgtcgagct gggagaaatt cgcggtcgat ttcgacgggg atgggaaaaa
      241 gaacctgtgg ggagatgatc cttcggatgc gctggcgtcc acggcgaact atctgcggca
      301 ctggggctgg accaagggtc agccctgggg ggtggaggtg acgctgcccg aggggttcga
      361 ttatgaccag acgacggaac gggtggtgaa gccggtcagc gagtggcagg cgatgggggt
      421 gcggaccgtt gccggagcgg acctgccgga ccatgggccg gggtcgatcc tgctgccggg
      481 cgggcatcgc ggggcggcgt tcctgatctg gccgaacttc caggtgatcg agaagtacaa
      541 cacggcggat gcttatgtgg tggcgatcgg gtccttgtcg gaccggctgc gcggggagcc
      601 ggcgatccag tctggctggc cacgggagtt gcgggcgctg acgctggagg agcggcggga
      661 gttgcaggac ctgttgaccc gcgcgggctt cgatgcggga ggcgtcgacg ggcggatggg
      721 gccgaagacg gtggcggcgg tgaaggcgtt ccagaaggcg cggggcatgg tgccggatgg
      781 gtatccttcg ctagaggttc ttgatcggtt gcgctgattt ctcacgcagg aacgaaatcg
      841 agcgctgacg cgcgatcctt ttgtctcgtc gtcgggcttc gcctcctcct cggctattgg
      901 gcgcttcaac cccaaacccc cgggatattt gtggaagaga aagcccttgc ggggtcaggc
      961 gggcctgcgc aggcgggcga ggaagaagcc gtccatgccg cccttgtcgg cccagtaatc
     1021 cgggcggagg cggagggcgc cttcgggggt ccaccaggtg gggtcaatgc ccggaatgtc
     1081 ggggcgttcg accgtgaggc ccgcgtggcg ctcaagggcc gcggcgagct gggcctcgcc
     1141 ttcctcgggc aggagcgagc aggtggagaa gaccaggcgg cctcctggtt tcagccaggt
     1201 cagggcgcgg tcgatcagtt gggattggag ggtggcgagc gcgggaagct cggagccatc
     1261 cttgacgaag gggaggtccg ggtggcggcg gatggtgccg gtggcgctgc agggggcgtc
     1321 gaggaggatg gcatcgaaga gggcttcggg ctgccagtgg agggcgtcgg cggtgatgag
     1381 ggtggcattc aggtttgtgc gggcgaggtt ggcttgcacg cgggccatgc ggggggcgga
     1441 gatgtcgagc gcggtgacgt gcgctccgct ggctgcgagt tgcaaggtct ttccgccggg
     1501 ggcggcgcag aggtcgagga tgtgctcgcc gggctggggt tggaggagtt gggcgggcag
     1561 tgcggcggcc gcatcctgga cccaccagcc gccctcggcg taacccggca gggtggagag
     1621 ctggccgggg gtgcggaggc ggaggctgcc ggtggggaga agctcgcctt ccgggtgggg
     1681 gaagcccggg cggagggtga ggtcgagggg tggctcctgg gcctggacgg attcgacagc
     1741 ggtggtgatg tcgcgaccgt aagtg
//
LOCUS       DATGWW010000678         2370 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_133951, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000678 DATGWW010000000
VERSION     DATGWW010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2370
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133951"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="VK150_09910"
     CDS             <1..334
                     /locus_tag="VK150_09910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31666.1"
                     /translation="LGVADRVLMMENAIYSVISPEGCASILWKDSTQAPKAAEALKLT
                     APHLLELGVIDGIVKEPLGGAHSDFDAAAAALKDAIIEAFSELSELSAEQLVEERYQK
                     FARMGSVG"
     gene            399..2003
                     /locus_tag="VK150_09915"
     CDS             399..2003
                     /locus_tag="VK150_09915"
                     /inference="COORDINATES: protein motif:HMM:NF013528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HLP31667.1"
                     /translation="MADAWGLDPRLARLAWLRGVDRPEALAWRLDPSWARCTDPHLLP
                     GVDEAVARIRQAIERRERIVVYGDYDVDGVTATALLVRTLERLEADVSFFIPNRFSDG
                     YGLHLDCIQELKATRDPGLLISVDCGVRSLAEVSASRDLGLDWVITDHHALGAELPAA
                     TAVVHPHLGDYPNRFLAGVGVAFKLAQALLGAAPRPAGAEAAFLDGLLKLVAIGTVAD
                     VMPLVDENALLVRRGLDLLAGKNGPGLAALLRAAKKEGALGAQDIAFGVAPRLNAVGR
                     MGGAEDAVRLLLTRDPAEAETLMAKVEGLNQERRAIQAQLTASLPPPDGAAFDLVLDP
                     SAHKGVIGIVAGHRMRATGRPSGVCTVVDGVAHCSLRAPDGFDLGELLALAQPFILGG
                     GGHRVAAGLSFEAARFAFVRQALQRGAAAQAEGREIPPLLLDGGPGDLPDDADLARLE
                     PFGQGFAPPMARIEGVVASASVFGADHWKLRVAGLPDPLTWFAGRTRPTLPKAGDRLH
                     LVAAPQGSLRWGRSWLVEGLLGEAAP"
     gene            2000..>2370
                     /locus_tag="VK150_09920"
     CDS             2000..>2370
                     /locus_tag="VK150_09920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31668.1"
                     /translation="MKVSTLLRDLPPARHPLWRALGWGLVAGTLGFTVRFLLVGSEGM
                     PGRTVGGDPLFGEGTRGSVGTLTEQLGPNRMVLAYKTIEGSEDDLHLSQVTGRLDEQA
                     GMWRLTSPKARRQAGVWTLQGP"
BASE COUNT          298 a          853 c          861 g          358 t
ORIGIN      
        1 cctgggcgtg gcggatcgcg tgctcatgat ggagaacgcc atctactcgg tgatttctcc
       61 cgagggctgc gcctcgatcc tctggaagga ctcgacccag gcccccaagg ccgccgaggc
      121 cctgaagctc acggcgcccc atctgctgga gctcggcgtc atcgacggca tcgtgaagga
      181 gcccctgggc ggtgcccact ccgacttcga cgccgccgcg gccgccctga aggacgccat
      241 catcgaggcc ttctccgaac tctccgagct ttcggcggag cagctcgtgg aagagcgcta
      301 ccagaagttc gcccgcatgg gcagcgtggg ctgacatgga agccatgcgc tggcgcctcc
      361 gccggagcag tccggcggga ctggcgccct ggatgcccat ggccgatgcc tggggcctgg
      421 acccgcgcct ggctcgcctg gcctggctgc gcggcgtgga ccggcccgag gccctggcct
      481 ggcggctgga tccctcctgg gcccgctgca ccgatccgca cctgctgccc ggggtggacg
      541 aggcggtggc gcgcatccgc caggccatcg agcggcgcga gcgcattgtc gtctacgggg
      601 actacgacgt ggacggcgtc accgccacgg cgctgctggt gcgcaccctg gagcgcctcg
      661 aggccgatgt ctccttcttc atccccaacc gcttttcgga cggctacggc ctgcacctgg
      721 actgcatcca ggagctgaag gccacccgcg atcccgggtt gctcatctcg gtggactgcg
      781 gcgtccgcag cctggctgag gtctcagcca gccgcgacct gggcctcgac tgggtgatca
      841 ccgaccacca tgccctgggg gccgaactgc ccgccgccac cgcggtggtg catccccacc
      901 tgggggacta ccccaaccgc ttcctcgcgg gcgtgggcgt ggccttcaag ctggcccagg
      961 ccctgctggg cgcggcgccg cgccccgcgg gcgccgaggc ggccttcctg gacgggctgc
     1021 tcaagctcgt ggccatcggc accgtggccg acgtcatgcc cctggtggat gaaaacgcgc
     1081 tgctggtgcg tcggggcctc gacctgctcg ccggaaagaa tggacccggc ctcgcggcgc
     1141 tgttgcgggc cgccaagaag gagggcgccc tgggggctca ggatatcgcc ttcggggtgg
     1201 cgccccgcct caatgccgtg ggccgcatgg ggggcgcgga ggacgcggtc cgactgttac
     1261 tcacgcggga tccggcggag gcagagaccc tgatggcgaa ggtcgaggga ctcaaccagg
     1321 aacgccgggc catccaggcc cagctcactg cctcgttgcc cccgccggac ggcgccgcct
     1381 tcgacctcgt gctggatccc tcggcccaca agggcgtgat cggcatcgtg gcggggcacc
     1441 gcatgcgcgc taccggccga ccttccggcg tctgcaccgt ggttgacggc gtggcccatt
     1501 gcagcctgcg ggcgccggat ggcttcgacc tgggggaact cctggccctg gcccagccgt
     1561 tcattctggg cggcggcggg catcgggtgg cggcggggct cagcttcgag gcggcccggt
     1621 tcgccttcgt gcgccaggcg ctccagcgcg gcgccgcggc ccaggctgag gggcgagaga
     1681 tcccgcccct gctgctggac ggcggtcccg gagacctgcc cgacgacgcc gacttggcgc
     1741 gcctcgagcc cttcggccag ggcttcgcgc cgcccatggc ccggatcgaa ggcgtggtcg
     1801 cgtccgcctc agtcttcggg gcggatcact ggaagctgcg ggtggcggga cttcccgatc
     1861 ccctcacctg gttcgcgggc cgcacccggc ccacgctgcc gaaggcggga gaccgtctgc
     1921 acctcgtcgc cgcaccgcag ggcagcctcc gctggggccg ttcctggctg gtggaaggct
     1981 tgctcgggga ggcggcgccg tgaaggtgtc caccctgctc cgggacctgc ctcccgcccg
     2041 gcatccgctc tggcgggcgc tgggctgggg cctggtcgcg ggcacgctgg gcttcacggt
     2101 gcggttcctc ctcgtgggca gcgagggcat gccgggacgc accgtgggcg gggatcccct
     2161 cttcggcgaa ggtacccggg gcagcgtggg cacccttaca gagcagttgg ggcccaaccg
     2221 catggtgctc gcctacaaga ccatcgaagg ctccgaggac gatctgcacc tgtcgcaggt
     2281 gacgggccgg ctggacgagc aagccgggat gtggcggctg acttcgccca aggcccggcg
     2341 ccaggccggc gtgtggaccc tgcagggccc
//
LOCUS       DATGWW010000679         1914 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_164173, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000679 DATGWW010000000
VERSION     DATGWW010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164173"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1158
                     /locus_tag="VK150_09925"
     CDS             <1..1158
                     /locus_tag="VK150_09925"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HLP31669.1"
                     /translation="GSHQAILGKLSGSFMLGHQGYEYVELGRLWQILLTVGMVGWLVL
                     VLRALIPALKGEAGRLGLLKLFVLSAIAIPLFYSAGFMYTRETHVALAEYWRWWVVHL
                     WVEGFFEVFATVAIALLSTRMGLLREGTALRAVSLSMGLFLGSGVIGTFHHLYYTGSP
                     ASISALGSVFSALEIVPLTIVGFEIAMSLKAGKAIGSGYEWPFKFFAAVCFWNLLGAG
                     VFGMLINPPSVLYFGQGLNTTPIHSHAALFGVYGFLAISLMLFALRGMTPDKAWDEKW
                     LSYGFWGLNLGLVLMLVLSLIPSGFYQIAQSLEHGTWYARSAEVVQGPLMRTFTWLRM
                     PGDVLFGLGALAVIVFTFKAVIGAWGWRTAEEAKPARGKADAAPAFAVAED"
     gene            complement(1216..>1914)
                     /locus_tag="VK150_09930"
     CDS             complement(1216..>1914)
                     /locus_tag="VK150_09930"
                     /inference="COORDINATES: protein motif:HMM:NF014904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[Fe-Fe] hydrogenase large subunit C-terminal
                     domain-containing protein"
                     /protein_id="HLP31670.1"
                     /translation="GFKDVDYGLTTRELAKMIRESGIRLPDMPKTGFDTPFGTATGSG
                     VIFGATGGVMEAALRSVIELVTGTKVEDLFAHADIIPVRGFEGIRYVELPIPAVGPVP
                     ALLADRFSSWDFLKGATLKVAVAHGTANAKKVMEDIKAGGPFSQCHFIEFMGCPGGCI
                     GGGGQPIPTSPEIREARARAIYSEDSAYPVRKSHENPDVLKIYSEFLKEGPCGAKSHH
                     LLHTHYTERGKYIE"
BASE COUNT          263 a          659 c          624 g          368 t
ORIGIN      
        1 ggcagccacc aggccatcct gggcaaactc tccggttcct tcatgttggg ccaccagggc
       61 tatgagtacg tggagctggg ccgcctttgg cagatcctcc tcaccgtggg catggtgggc
      121 tggctggtgc tggtgctgcg cgcgctcatc cccgcgctga agggcgaggc gggccgcctg
      181 ggcctcctga agctcttcgt gctgtcggcc atcgccattc ccctcttcta ctccgcgggc
      241 ttcatgtaca cccgcgagac ccacgtcgcc ctggccgagt actggcgctg gtgggtggtc
      301 cacctctggg tcgagggctt cttcgaggtc ttcgccaccg tcgccatcgc gctgctctcc
      361 acccgcatgg gcctgctgcg cgaaggcacc gcgctgcgcg ccgtgagcct ctccatgggc
      421 ctcttcctcg gcagcggcgt catcggcacc ttccaccacc tctactacac ggggtccccc
      481 gcctccatct cggccctggg ctctgtgttc agcgccttgg agatcgtgcc cctcaccatc
      541 gtgggcttcg agatcgccat gagtctgaag gcgggcaagg ccatcggcag cgggtacgag
      601 tggcctttca agttcttcgc ggcggtctgt ttctggaacc tgctaggcgc cggcgtcttc
      661 ggcatgctca tcaatccgcc ctccgtgctc tacttcggcc agggcctgaa caccacgccc
      721 atccacagcc acgctgccct cttcggcgtc tacggtttcc tcgccatctc gctcatgctg
      781 ttcgccctgc gcgggatgac gcccgacaag gcctgggacg agaagtggct gagctacggc
      841 ttctggggcc tgaacctggg cctggtcctg atgctggtgc tctcgctgat ccccagcggc
      901 ttctatcaga tcgcccagag ccttgagcat ggcacctggt acgcccgcag cgccgaggtg
      961 gtgcagggtc ccctgatgcg caccttcacc tggctgcgca tgcccggcga tgtcctcttc
     1021 gggctcggcg ccctcgcggt gatcgtcttc accttcaagg cggtcatcgg cgcctggggc
     1081 tggcggacgg ctgaagaggc caaacccgcc cggggcaagg ccgatgcggc tcccgccttc
     1141 gcggtggccg aggactgaac ggcatgacag gaagggcccc cgccagccgg cgggggccct
     1201 ttcacgtact gggcgctatt cgatgtactt gccccgttcg gtgtagtggg tgtgcagcag
     1261 gtgatggctc ttggcgccgc agggaccctc cttcaggaac tccgagtaga tcttcagcac
     1321 gtccgggttc tcgtgggact tgcggacggg gtaggcggaa tcttcggaat agatggctct
     1381 ggcccgggcc tcccggatct ccggcgaggt ggggatcggc tggccgccgc ccccgatgca
     1441 gccgcccggg cagcccatga actcgatgaa atggcactgg ctgaagggcc cgccggcctt
     1501 gatgtcctcc atgaccttct tcgcgttggc ggttccgtgg gccacggcga ccttcagcgt
     1561 ggcgcccttc aggaaatccc agctggagaa gcggtccgcc aggagcgccg ggacgggacc
     1621 tacggccgga atcggcagct ccacgtagcg gatgccctcg aaaccccgca ccggaatgat
     1681 gtcggcgtgg gcgaagagat cctccacctt ggtgcccgtg accagctcga tgaccgagcg
     1741 cagcgccgcc tccatgacgc cgcccgtggc gccgaagatc acccccgatc cggtggcggt
     1801 gccgaagggg gtgtcgaagc cggtcttcgg catgtcgggc aggcggatgc ccgattcgcg
     1861 gatcatcttg gccagttccc gggtggtgag cccgtagtcc acgtccttga agcc
//
LOCUS       DATGWW010000680         1851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_164229, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000680 DATGWW010000000
VERSION     DATGWW010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164229"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1019
                     /locus_tag="VK150_09935"
     CDS             <1..1019
                     /locus_tag="VK150_09935"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HLP31671.1"
                     /translation="ADTLMPGVPMSAELLEQRSRIRIATLSILAGACVLGLKYLSYVL
                     SGSVALKSDAIESIVNVVAAVFALGAVIFAGKPADKEHPYGHGKIEYFSAAFEGGLIS
                     LASVFILFEAAKGLIYGVELKDLGRGLAVNLVAGGLNGLLGWFLLTQGRKKRSKALEA
                     DGHHILSDFWTTVGIVAGLVAVKLTGIKWLDPVMAMVVGLLLARTGFRLVRESSQALL
                     DMEDPDVLGKVLASMNRVRTWDIIAVHEMRTFRSGRYTHVDVHIVVPEFYPVRQAHDL
                     CETFGKKALEEENIEGEVHTHVDPCGRLYCERCPAEACLIRRAPKTQDAAFVLEEAIA
                     LGPA"
     gene            1054..>1851
                     /locus_tag="VK150_09940"
     CDS             1054..>1851
                     /locus_tag="VK150_09940"
                     /inference="COORDINATES: protein motif:HMM:NF017669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HLP31672.1"
                     /translation="MTEPLLIAKGPSDLVLLPRMANRHGLVAGATGTGKTVTLRTMAE
                     RFSAIGVPVFLADVKGDLPGICQPGGDNPKVTERVEELKLEGFEYAGFPVAFWDLYGE
                     QGHPVRTTVSDMGPLLFARLLNLNDTQGGVLNLVFKIADDNGLLLLDLKDLRAMLQFV
                     GDHAAEFKTQYGNVSTASIGAIQRGLLELESQGAETFFGEPALDLDDLVQTDAKGRGV
                     INILAADKLINAPKLYATFLLWLLSELFERLPEVGDPEKPKLAYFFDE"
BASE COUNT          289 a          661 c          594 g          307 t
ORIGIN      
        1 cggctgatac gctgatgccc ggagtgccca tgtccgccga actcctcgag caacgttcca
       61 ggatccgcat cgcgacgctc tcgatcctgg ccggcgcctg cgtcctgggc ttgaaatacc
      121 tgtcgtacgt cctctccggc tccgtggccc tgaagtccga cgccatcgag agcatcgtga
      181 acgtcgtggc cgccgtgttc gcgctcggcg ccgtgatctt cgcgggcaag cccgccgaca
      241 aggagcatcc ctacggtcac gggaagatcg agtatttcag cgccgccttc gaggggggcc
      301 tcatctcgct ggcctccgtc ttcatcctgt tcgaggcagc caagggcctg atctatggcg
      361 tggagctgaa ggacctcggc cgcggcctcg cggtgaacct cgtggcgggc ggcctcaacg
      421 gcctgctggg ctggttcctc ctcacccagg ggcggaagaa gcgctccaag gccctggagg
      481 ccgacggcca ccatatcctg tcggatttct ggaccacggt gggcatcgtc gcgggcctgg
      541 tcgccgtgaa gctcacgggg atcaagtggc tggacccggt catggccatg gtggtgggcc
      601 tgctgctggc ccgcacgggc ttccggctgg tcagggaatc ctcccaggcc ctgctcgaca
      661 tggaggaccc cgacgtgctc gggaaggtgc tggcctccat gaaccgggtg cgcacctggg
      721 acatcattgc cgtgcacgag atgcgcacgt tccgcagcgg ccggtacacc cacgtggacg
      781 tccacatcgt ggtgccggag ttctaccccg tgcgccaggc ccacgacctc tgcgagacat
      841 tcgggaagaa ggccctggag gaggagaaca tcgagggcga ggtgcacacc cacgtggatc
      901 cctgcggccg cctctactgc gagcgctgcc ccgccgaggc ctgcctcatc cgccgggccc
      961 ccaagaccca ggacgccgcc ttcgtgctgg aagaggccat cgccctcggg ccggcctgac
     1021 ccgtttcccg cccctccctt ctccgaggcc cccatgaccg agcccctgct gatcgccaaa
     1081 ggcccctccg acctggtcct gctgccccgc atggccaacc gccacgggct cgtggcgggc
     1141 gccaccggca ccggcaagac cgtgaccctg cgcaccatgg ccgagcgctt ctcggccatc
     1201 ggcgtgcccg tgttcctggc cgacgtgaag ggcgacctgc ccggcatctg ccagcccggg
     1261 ggcgacaacc ccaaggtgac cgagcgcgtc gaggaattga agcttgaggg cttcgagtac
     1321 gcgggctttc cggtggcctt ctgggatctc tacggcgagc agggccaccc ggttcggacc
     1381 accgtgagcg acatggggcc cctgctcttc gctcgactgc tgaacctcaa cgacacccag
     1441 ggcggcgtgc tgaacctggt gttcaagatc gccgacgaca atggcctgct gctgctggac
     1501 ctcaaggacc tgcgcgccat gctgcagttc gtgggcgacc acgccgccga gttcaagacc
     1561 cagtacggca acgtctccac cgcgagcatc ggcgccatcc agcgtgggct cctggagttg
     1621 gagagccagg gcgccgagac gttcttcggc gagcccgccc tggacctcga cgacctcgtg
     1681 cagaccgacg ccaagggtcg cggcgtcatc aacatcctgg ccgccgacaa gctcatcaac
     1741 gcgccgaagc tctacgccac cttcctgctc tggctgctgt cggagctctt cgagcggctg
     1801 cccgaggtgg gcgatcccga gaagcccaag ctggcctact tcttcgacga g
//
LOCUS       DATGWW010000681         2663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_216435, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000681 DATGWW010000000
VERSION     DATGWW010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2663
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216435"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1650
                     /locus_tag="VK150_09945"
     CDS             <1..1650
                     /locus_tag="VK150_09945"
                     /inference="COORDINATES: protein motif:HMM:NF012688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HLP31673.1"
                     /translation="FAELAPHLDPRNLPFAEARAILAPLLADAAVGKCGQNLKYDLQV
                     LARHGLLVRGLADDSMILSFLLESGVRHNLDDLSVRLLDVKPIAFEEVVGKGKAQKRF
                     DEAPFEQAVQYAAEDADLALRLCDKLRGTLADDQLKRLYEEVDLPLVDVLATLEGHGV
                     RLDLAVLASLAEDMHRERKRAEARVVELAGGPFNLNSPTQLGRVLFGKLGYKPVKYTG
                     KTKAPSTDEDVLQELASEQGAEIATELLRHRQMVKLLGTYVEALPQMVNPVTGRVHTK
                     LHQAVVASGRLASNDPNLQNIPIRTEEGRAIRGAFVPEPGWVLLDADYSQIELRVVAA
                     LAEDPVLLAAFEAGEDIHRRTASEVMGLPMDQVSAEDRSKAKAVNFGLLYGQGAFALA
                     ANLGITQKEAKAFIERYFERMPKVAAWIEGAKEKALAQGLVRTHWGRIRRIPELESPN
                     KQFQAQGLREAVNTIVQGTAADLMRRAMVRLHRSIQAGGLRARLLLQVHDELLMEAPP
                     EEVHQASALLKEAMEGADDLGRLGVTLAAEVRTGGSWLACK"
     gene            1812..>2663
                     /locus_tag="VK150_09950"
     CDS             1812..>2663
                     /locus_tag="VK150_09950"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HLP31674.1"
                     /translation="MSQFNIAWLPGDGVGVEVMEAAKICLDALKFDAKYTHGDIGWEF
                     WCKEGESFPQRTIDLLENSHAAMFGAITSKPVKDAEAELVPELKGKGLIYRSPIVRMR
                     QMFDLYTCLRPCKAYPGNPLNYKEGIDMVIFRENTEDLYSGVEFTPVPDELKATLKKL
                     SKPFGHFADIPGDQFAITCKINTQRGCDRIIRAAFEYAKTFGYPKVTIIHKANVVRAT
                     EGMFLETGKRIAKEYPGIEMDDANVDAITMWMLKNPKNYGVMVATNLFGDIVSDLAAG
                     LVGGLGVV"
BASE COUNT          498 a          853 c          898 g          414 t
ORIGIN      
        1 ttcgcggagc tggcgccgca cctggatccc cgcaacctgc ctttcgcgga ggcgcgggcc
       61 atcctggcgc cgctgctggc cgatgccgcc gtcggcaagt gcggccagaa cctcaagtac
      121 gacctccagg tgctggcgcg ccacggcctc cttgtgcggg gactggccga cgacagcatg
      181 atcctgagct tcctgctgga gagcggcgtc cggcacaacc tggatgacct ctccgtgcgg
      241 ctgctggatg tgaagcccat cgccttcgaa gaggtggtgg ggaaaggcaa ggcgcagaag
      301 cgcttcgacg aggccccttt cgaacaggca gtgcagtacg ccgccgagga cgcggacctg
      361 gcgctgcgcc tctgcgacaa actgcgcgga acccttgccg acgatcagct gaagcggctc
      421 tacgaggagg tggacctgcc attggtcgac gtgctggcga ccttggaggg ccacggagtg
      481 cggctcgact tggcggtgct ggcgagcctg gccgaggaca tgcaccggga gcggaagcgg
      541 gccgaggcca gggtggtcga gcttgccggc ggacccttca atctgaacag ccccacccag
      601 ctgggccgtg tcttgttcgg aaagctgggc tacaagcccg tgaagtacac cgggaagacc
      661 aaggccccga gcacagatga agacgtgctg caggaactgg cttcggagca gggcgccgag
      721 atcgccaccg aactgctgcg gcaccgccag atggtgaagc tcctgggcac ctacgtggag
      781 gcgctgccgc aaatggtgaa tccggtcacg ggccgggtgc acaccaagct gcatcaagcg
      841 gtggtggcct cggggcggct cgcctccaat gatccaaacc tgcagaacat ccccatccgc
      901 accgaggagg gccgggccat ccgcggggcc ttcgtgccgg agccgggctg ggttctgctc
      961 gacgcggact acagccagat cgagcttcgg gtggtggcgg cgctggcgga agatccggtg
     1021 ctgctggcgg ccttcgaggc cggcgaggac atccaccggc gcacggcctc ggaggtgatg
     1081 ggcctgccca tggaccaggt gagcgccgag gaccgaagca aggccaaggc cgtgaacttc
     1141 ggcctgctct acggtcaagg ggccttcgct ctcgcggcga acttgggcat cacgcagaag
     1201 gaggccaagg ccttcatcga gcggtacttc gagcgcatgc ccaaggtggc cgcctggatc
     1261 gaaggcgcca aggagaaggc cctggcgcag gggctcgtgc gcacccactg gggtcggatc
     1321 cgccgcatcc ccgagctcga gagccccaac aagcagttcc aggcccaggg cctgcgtgag
     1381 gcggtgaaca ccatcgtgca gggcaccgcc gccgacttga tgcgccgggc catggtacgc
     1441 ctgcaccgaa gtatccaggc aggaggcctc cgggctcggc tgctgctcca ggtgcatgac
     1501 gaactgctca tggaggcgcc accggaggaa gtgcaccagg cttccgccct gctcaaggag
     1561 gcgatggaag gcgcggacga tctggggcgg ctgggcgtga ccctggccgc ggaagtccgc
     1621 accggcggca gttggctggc ctgcaagtag cagagccgat ttgacagttt gtcgggcagc
     1681 ctccctcgat catgcgattt cagggggttt tgtgatggcg gtccgggctc aaacttaacg
     1741 gggaggtcat gattgggcga ttccggcgcg agggcgccga tcccccgtcc ccttcctgca
     1801 ggagcccgat catgagccag ttcaacatcg cgtggttgcc cggtgatggc gtcggcgtcg
     1861 aagtcatgga ggcggcgaag atctgcctcg acgccctgaa gttcgacgcc aagtacaccc
     1921 acggcgacat cggttgggaa ttctggtgca aggagggcga gtccttcccc cagcgcacca
     1981 ttgacctgct ggagaacagc cacgctgcca tgttcggcgc catcacctcg aagcccgtga
     2041 aggatgccga ggccgagctg gtgcccgagc tgaagggcaa gggcctcatc taccgcagcc
     2101 ccatcgtgcg catgcggcag atgttcgatc tctacacctg cctgcggccc tgcaaggcct
     2161 acccgggcaa ccccctgaac tacaaggaag gcatcgacat ggtgatcttc cgggagaaca
     2221 cggaagacct ctactccggc gtggagttca cacccgtgcc ggatgaactg aaggccactc
     2281 tgaagaagct cagcaagccc ttcggccact tcgccgacat ccccggcgat cagttcgcca
     2341 tcacctgcaa aatcaacacc cagcgcggct gcgatcgcat catccgggcg gcgttcgagt
     2401 atgcgaagac gttcggctat cccaaggtca ccatcatcca caaagccaac gtggtgcgcg
     2461 ccaccgaggg catgttcctc gagaccggca agcgcatcgc caaggaatac cccggcatcg
     2521 agatggatga cgccaacgtg gacgccatca ccatgtggat gctgaagaat ccgaagaact
     2581 acggcgtgat ggtggccacc aacctcttcg gcgacatcgt cagcgacctc gcggccggcc
     2641 tggtcggcgg cctcggcgtg gtg
//
LOCUS       DATGWW010000682         3747 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_401577, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000682 DATGWW010000000
VERSION     DATGWW010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3747
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401577"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..909
                     /gene="nrfD"
                     /locus_tag="VK150_09955"
     CDS             <1..909
                     /gene="nrfD"
                     /locus_tag="VK150_09955"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HLP31675.1"
                     /translation="PIVRPTILTGFLGYAFVIMALLLDLGQPWRIWHAIVYWNPHSVM
                     FEVAWCVMLYTTVLAVEFSPVVFERFGFHAPARLIHRLITPLVIIGVILSTLHQSSLG
                     SLYLIVPSKLHPLWYSPMLPLHFYISAIGAGIGMVVLESYLSKRAFHRHLEMDLLEPL
                     ARGMVVALGIYGLMRLQAIRRNHAFGSILEFGYEGQMFLLEFALGVVLPVVLMSFRRL
                     RTNPDWLVGSAFLAVLGFVMNRLNVSITGMEAASGTRYLPSAMEIIVSVGLVATGMAV
                     FAFAVRNFPIFPEGPVAHPQEPKEGA"
     gene            913..2439
                     /locus_tag="VK150_09960"
     CDS             913..2439
                     /locus_tag="VK150_09960"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP31676.1"
                     /translation="MRTRIGTRLILGAGLATALVIGGMSVAVLRSHTAQLMTERTRSA
                     DQLSETIKSATHFDMLGNRRENLHEQIRAVGGLQEQGIRKVRVFNKEGRIMFSSTAGE
                     IGTSLDIRGEACYACHAEGRPLERLDIQARARTFRGADGHRVLGVIKPIPNEPSCSTA
                     ACHAHSAKQSLLGVLDVNVSLAEVDQEIARSRVVILASAILAILAGSTMLWWLNRRLV
                     VRPVAALVEGTRRVTEGDLSTAIPVGGNHELGELAKAFNDMTHTLAETQGQLAQADKL
                     ASVGRLAAGVAHEINNPLTGVLSYASLLRKRLDHDASACEDLDVIVRETVRCRGIIRG
                     LLDFARPTAPARKPMDLNEVVRRSVSVVMTQLSLNKVDLSLQLDSSLPEVQADANQIQ
                     QVMVNLMLNAADAIGEEGGHIRAITRTASPEAIEFLLEDSGRGIAAEDLPRIFEPFFT
                     TKGNHGTGLGLAVSWGIVEAHGGSLTVQSEPGQGTTFILRLPTAALPDGGVSSIPTPS
                     "
     gene            2449..3570
                     /locus_tag="VK150_09965"
     CDS             2449..3570
                     /locus_tag="VK150_09965"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP31677.1"
                     /translation="MTAVLILLMFVAFVGIDFLVRTTLRKAKEKRERQAREAVLNTSI
                     RLDFTHEAKSLKRVEVPNPKARILAVDDEAVVLDSFRRILVLEGFSVDTVEHGPEALG
                     LIQRHDYDFVFTDLKMPDMDGVEVVKAVKHLRPDVDVVVVTGYGSIETAVQTLQHGAC
                     EYVQKPFTADELGEFARKLLIKREARIEAARQPSVRVVAPEMAEVVPASDFCVPGGAF
                     LSAGHAWVRIEPEGQVRIGMDDFMRKALGTVKEVVLPQRGKTVKRGETLFTLKGATGT
                     VHVAAPLSGRVEHDNAGLKSDPAELIHSPYDRGWVCLMTPSDLAHELTALKIGKPVID
                     WYQEEITRFRATDGVQGTGTLDWAAFEQQFLGAKETTSV"
BASE COUNT          595 a         1317 c         1211 g          624 t
ORIGIN      
        1 cccatcgtgc ggcccaccat cctcaccggc ttcctgggct acgcctttgt gatcatggcg
       61 ctgctgctcg acctgggcca gccctggcgc atctggcacg ccatcgtcta ctggaatccg
      121 cactccgtca tgttcgaggt ggcctggtgc gtgatgctct acaccacggt gctggcggtg
      181 gagttctctc ctgtcgtgtt cgagcggttc ggcttccatg ccccggcgcg gctcatccat
      241 cggctcatca cgcccctcgt gatcatcggc gtgatcctct cgacccttca ccagtcgtca
      301 ttgggctcgc tctacctgat cgttcccagc aagctccatc ctctctggta ctccccgatg
      361 ctgccgctgc acttctacat ctcggccatc ggggcgggca tcggcatggt ggtgctcgag
      421 tcctacctca gcaagcgcgc cttccaccgg catctggaga tggacctgct tgagcctctg
      481 gcccgcggca tggtcgtggc gctgggcatc tacgggctga tgcgcctcca ggccatccgg
      541 cgcaaccatg cgttcggctc gatcctcgag ttcggctacg agggccagat gttcctgctg
      601 gagttcgccc tcggcgtggt gctgccggtc gtgctgatgt ccttccgccg tctgcgcacc
      661 aacccggatt ggctcgtcgg cagcgccttc ctggccgtgc tgggcttcgt gatgaaccgg
      721 ctcaatgtga gcatcaccgg catggaagcc gcttcaggca cccgctacct cccctcggcg
      781 atggagatca tcgtctcggt gggcctggtg gcgacgggca tggcggtctt cgccttcgcc
      841 gtgcgcaact tcccgatctt ccccgagggg cccgtggcgc atccccagga gccgaaggaa
      901 ggagcctgag ccatgcgcac ccgcatcggt acccgtctga tcctcggcgc cggcctcgcg
      961 acggcgctgg tgatcggcgg catgtccgtg gctgtgctgc ggtcgcacac cgcccagctg
     1021 atgaccgagc gcacccgcag cgcggaccag ctgagtgaga cgatcaagag cgcgacccac
     1081 ttcgacatgc tgggcaaccg ccgggagaac ctgcacgagc agatccgtgc cgtgggcggg
     1141 ctgcaggagc agggcatccg gaaggttcgg gtgttcaaca aggaaggacg gatcatgttc
     1201 tcctccacgg ccggggagat cggcaccagc ctggacatcc gcggagaggc ttgctacgcc
     1261 tgccacgcgg agggacggcc cctcgaacgc ctggacatcc aggcccgggc ccgcaccttc
     1321 cgcggggcgg acgggcaccg cgtgctgggg gtgatcaaac ccatcccgaa cgaaccctcc
     1381 tgctccacgg ccgcctgtca cgcccacagc gccaagcaga gcctgctcgg cgtgctggac
     1441 gtgaatgtct ccctggcgga ggtggatcag gaaatcgccc gcagccgggt ggtcatcttg
     1501 gcctcggcca tcctggccat cctggccggc agcaccatgc tctggtggct caaccgccgc
     1561 ctggtggtgc gccccgtcgc cgccctggtg gagggcaccc gccgcgtcac cgagggcgac
     1621 ctcagcacgg ccatccccgt gggcggcaac cacgaactgg gcgagctggc gaaggccttc
     1681 aacgacatga cccacactct ggccgaaacg cagggccagc tggcccaggc ggacaagctg
     1741 gcctccgtgg gccgactggc tgcgggcgtg gcgcacgaga tcaacaaccc gctgaccggg
     1801 gtgctcagtt atgcctccct gctccgcaag cggctcgacc acgatgcgtc ggcctgcgag
     1861 gacctggacg tgatcgtgcg ggagaccgtg cgttgccggg gcatcatccg ggggctgctg
     1921 gacttcgcgc ggcccaccgc gccggcccgg aagcccatgg atctgaacga ggtcgtccgg
     1981 cggtccgtct cggtggtgat gacccagctc tccctgaaca aggtggacct ctccctgcag
     2041 ctggattcaa gtcttccgga agtgcaggcg gacgccaacc agatccagca ggtgatggtg
     2101 aacctgatgc tcaacgcggc cgacgccatc ggcgaggagg gcggccatat ccgcgccatc
     2161 actcgcacgg cgtcgcccga ggccatcgag ttcctgctcg aggacagcgg gcgcggcatc
     2221 gccgcagagg acctgccgcg gatcttcgaa cccttcttca ccaccaaggg caaccatggc
     2281 accggcctgg ggctcgcggt cagctggggc atcgtcgagg cccacggcgg atcgctgacc
     2341 gtccagagcg agccgggtca gggaaccacc ttcatcctcc gcctgcccac ggccgcccta
     2401 cccgatggcg gcgtgtcctc cattcccacc ccttcctagg aggtcaccat gaccgccgta
     2461 ttgatccttc tcatgttcgt ggctttcgtg ggcattgatt tcctcgtgcg cacgaccctt
     2521 cgcaaggcga aggaaaagcg ggagcgccag gcccgcgagg cggtgctcaa cacgtccatc
     2581 cgcctcgact tcacccatga ggccaagagc ctcaagcgcg tcgaagtgcc caaccccaag
     2641 gcccgcatcc tggccgtgga cgacgaggcc gtggtgctgg attccttccg acgcatcctg
     2701 gtgctcgaag gcttcagcgt ggacacggtg gaacacggcc ccgaggcgct gggcctgatc
     2761 cagcggcacg actacgactt cgtcttcact gacctcaaga tgcccgacat ggacggcgtg
     2821 gaagtggtga aggcggtgaa gcacctccgc cccgatgtgg atgtggtcgt cgtcaccggc
     2881 tacggcagca tcgagaccgc ggttcagacc ctgcagcacg gggcctgcga atacgtccag
     2941 aagcccttca cggccgatga gctgggcgag ttcgcccgga agctgctcat caagcgggaa
     3001 gcccgcatcg aggcggcccg ccagcccagc gtccgcgtgg tggcgcccga gatggccgag
     3061 gtcgttcccg ccagcgattt ctgcgtgccg ggcggcgcct tcctgtccgc gggccacgcc
     3121 tgggtccgca tcgagcccga gggccaggtt cgcatcggca tggacgactt catgcgcaag
     3181 gccctgggca ccgtgaagga agtggtgctg ccgcagcggg gcaagaccgt gaagcggggc
     3241 gagaccctct tcaccctcaa gggcgccacg ggcaccgtcc acgtggccgc ccccctctcc
     3301 ggccgcgtcg agcacgacaa cgcgggcctg aagagcgatc ccgcggagct catccacagc
     3361 ccctatgacc gtggctgggt ctgcctcatg acgccctcgg acctcgccca cgaactcact
     3421 gccctgaaga tcggcaagcc ggtcatcgac tggtaccagg aggagatcac gcggttccgc
     3481 gcgacggacg gcgtgcaggg caccggcacc ctggactggg ccgccttcga gcagcagttc
     3541 ctgggcgcca aggaaaccac cagcgtctag acctggcacc tggcaggccg cgggggcttc
     3601 ggaggcatca gcctccgaag ccctcgcccg cgtggtagct cgagcgcacc aggggggcgg
     3661 attccacccg ttcgaagccc atctcgagtc ccttgcggcg gtacatctcg aattcgtcag
     3721 gcgccacgta gcggtccaag ggcaggt
//
LOCUS       DATGWW010000683         3292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_134384, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000683 DATGWW010000000
VERSION     DATGWW010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134384"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1281
                     /locus_tag="VK150_09970"
     CDS             <1..1281
                     /locus_tag="VK150_09970"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP31678.1"
                     /translation="GETRWIDFAAGSVALGDRVVGLGTAFDVTERVQANEAKLKVERK
                     LLEAQKLESLGLLAGGVAHDFNNLLTVIQGNAGMLRDALDDPEVARGCLHNIEDTCRR
                     ASDLVRQMLAYSGRGMVHAQHLDLNRLIQEIAQLLRVSIPKVVTLRFDLAEGLPPVLA
                     DSAQLQQVVMNLVTNAAEAIKDPEGTVHLRSGFRDLGETDVTGLCVAETLKPGPFVYV
                     EVEDTGAGMDAETQARIFDPFFTTKFTGRGLGLAAMQGIVRGHGGGVGIQSHPGEGTT
                     FRVYLPAQVGATVPEASEPAAFDSGWMGSGLVLVADDEPGIREFARQVLEKAGFEVLL
                     ALDGQEALDLARTRLAELRLVVLDLTMPKMGGDEALAGLRALGFQSPVIQWSGYNAQE
                     GIRDPGVRFLRKPFTAEELLRAVRGILEERLIAP"
     gene            complement(1299..2003)
                     /gene="pyrH"
                     /locus_tag="VK150_09975"
     CDS             complement(1299..2003)
                     /gene="pyrH"
                     /locus_tag="VK150_09975"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: protein motif:HMM:TIGR02075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HLP31679.1"
                     /translation="MKFKRILLKLSGEALMGEQKGGIDPAVVSMIADQVKTIREMGVE
                     VGLVIGGGNIFRGVAGATKGMDRTTADHMGMLATMINALALQDALEHKGVHTRTLSGL
                     EMPKVTETYIRRRATRHLEKGRVVIFGAGTGNPYFSTDTAAALRANEVNAEVVMKATN
                     VDGIYTADPKKDPTATRFDRISFQEVLEKGLKVMDAPAIALCMDNKLPILVFDMNKPG
                     NLVAAVKGEAVGTLVS"
     gene            complement(2091..2741)
                     /gene="tsf"
                     /locus_tag="VK150_09980"
     CDS             complement(2091..2741)
                     /gene="tsf"
                     /locus_tag="VK150_09980"
                     /inference="COORDINATES: protein motif:HMM:TIGR00116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HLP31680.1"
                     /translation="MAFTAQDVKALREKTGLGMMDCKKALEESNGDMEQANEWLRKKG
                     LAASAKKADRIAAEGIVEAYIHPGGRVGVLVEVNSETDFVARNEAFQRLVKEIAMHIA
                     AADPAPRFVTKEEVTQDFLDTEKRIATEQALATGKPANIVERIVEGKMNSIFKEVCLL
                     EQPFIMNPDLTIQQYLSQKTAEIGEKLSIRRFTKYIMGEGLEKRSENFAAEVAAAK"
     gene            complement(2827..>3292)
                     /gene="rpsB"
                     /locus_tag="VK150_09985"
     CDS             complement(2827..>3292)
                     /gene="rpsB"
                     /locus_tag="VK150_09985"
                     /inference="COORDINATES: protein motif:HMM:TIGR01011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HLP31681.1"
                     /translation="LGGMLTNFSTIKKSLEKFREIEATLADPARTALLSKKELLTLNR
                     TRLKLEASFHGIRDMRALPDVLFVIDPHREDIAVTEAKKLGIKVVGIVDTNCDPDKID
                     YVIPGNDDAIRSILLFSERVADSILEGRQSFRDKGDSDEMKKMMAEKMEVEG"
BASE COUNT          489 a         1006 c         1170 g          627 t
ORIGIN      
        1 ggcgaaaccc gctggatcga tttcgcagcc gggtccgtcg cgctgggcga tcgcgtggta
       61 ggcctgggca cggcctttga tgtcaccgag cgggtccagg ccaacgaagc gaagctcaag
      121 gtggagcgca agctcctcga ggcccagaaa ctcgagagcc tgggtctgct cgcgggcggc
      181 gtggcccacg acttcaacaa cctgctgacc gtcatccagg gcaatgcggg catgctgcgg
      241 gatgccctgg acgatccgga ggtggcccgg ggctgcctgc acaacattga ggacacctgc
      301 cgccgcgcct cggacctggt gcggcagatg ctggcctatt ccggccgggg gatggtgcac
      361 gcccagcacc tggacctcaa ccgcctcatc caggagatcg cccagctgct ccgtgtgtcc
      421 attcccaagg tggtgacgct gcgcttcgac ctggccgagg gcctgccgcc ggtcctcgcg
      481 gattcagccc agctccagca ggtggtgatg aacctcgtca ccaacgcggc ggaggccatc
      541 aaggacccag aggggacagt gcacctgcgc tcgggtttcc gcgatctggg cgagacggac
      601 gtgaccgggc tttgcgtggc ggaaaccctg aagcctgggc ccttcgtcta cgtcgaggtg
      661 gaggacaccg gcgcgggcat ggacgccgag acgcaggcgc gcatcttcga ccccttcttc
      721 accaccaagt tcacagggcg gggtctcggc ctcgcggcca tgcagggcat cgtccgcggc
      781 catggcggcg gcgtgggcat ccagagccat ccgggggagg gcacgacctt ccgcgtctac
      841 ctgccggcgc aggtgggcgc gacggtgccg gaggcctccg agcctgcggc cttcgattcg
      901 ggctggatgg ggtccggcct ggtcctggtg gccgacgacg agccgggcat ccgcgagttc
      961 gctcgccagg tgctggagaa ggccggattc gaggtgctgc tcgcgctgga tggccaggag
     1021 gcgctcgacc tggcccggac gcggctggcg gagctgcgcc tggtggtgct ggacctcacc
     1081 atgccgaaga tgggcggtga cgaggccctc gcgggactgc gggccctggg cttccagtcc
     1141 ccggtcatcc agtggagcgg ctacaacgcc caggaaggca tccgggatcc cggggtgcgc
     1201 ttcctgcgga agcccttcac cgcggaagaa ctgctgaggg cggtgcgggg gatcctggag
     1261 gagcgcctca tcgccccgta gtggggcgtt cggggcccct agctgacgag ggttcccacg
     1321 gcctcaccct tgacggccgc cacgaggttg ccgggtttgt tcatgtcgaa caccaggatg
     1381 ggcagcttgt tgtccatgca cagagcgatg gcgggggcat ccatgacctt caaccccttc
     1441 tcgagcacct cctggaagct gatgcggtcg aagcgggtgg cggtgggatc cttcttggga
     1501 tcggcggtgt agatgccgtc cacgttggtg gccttcatca ccacttcggc attgacctca
     1561 ttggcgcgca gcgcggcggc cgtatcggtg ctgaagtagg ggttgccggt gccggcgccg
     1621 aagatgacca cgcggccctt ctcaaggtgg cgggtggcgc ggcggcggat gtaggtctcg
     1681 gtgaccttgg gcatctcgag gccggacagg gtgcgggtgt ggacgccctt gtgctccagg
     1741 gcgtcctgga gggccagggc gttgatcatg gtcgccagca tgcccatgtg gtccgccgtg
     1801 gtgcggtcca tgcccttggt ggcgccggcg acgccgcgga agatgttgcc gccgccgatg
     1861 acgaggccca cttcgacgcc catctcccgg atggtcttca cctgatccgc gatcatggag
     1921 accacggctg ggtcgatgcc acccttctgc tcacccatga gggcttcgcc ggagagcttg
     1981 aggaggatgc gcttgaactt catggggacc tcggaacgga tgcgatcagc ctagcgtgtg
     2041 ttcaaaaaaa gggcggcacg aatgccgccc tcggtcggaa aggtcgaacc ttacttggcg
     2101 gcggcgactt cggcggcgaa gttctcgctg cgcttctcca ggccctcgcc catgatgtac
     2161 ttggtgaagc ggcggatgct cagcttctcg ccgatctccg cggtcttctg ggacaggtac
     2221 tgctggatgg tgaggtcggg gttcatgatg aagggctgtt cgaggaggca gacctccttg
     2281 aagatgctgt tcatcttgcc ctcgacgatg cgctcgacga tgttggcggg cttgccggtg
     2341 gccagcgcct gctcggtggc gatgcgcttc tcggtgtcga ggaagtcctg ggtgacctct
     2401 tccttggtga cgaagcgggg cgcgggatcg gcggcggcga tgtgcatcgc gatctccttc
     2461 accaggcgct ggaaggcttc gttgcgggcc acgaagtcag tctcggagtt cacttcgacc
     2521 agcacgccca cgcggccgcc ggggtggatg taggcttcga cgatgccctc ggcggcgatg
     2581 cggtcggcct tcttggcgga cgcggccagg cccttcttgc ggagccactc gttggcctgc
     2641 tccatgtcgc cgttgctctc ttccagtgcc ttcttgcaat ccatcatgcc gaggccggtc
     2701 ttctcgcgca gcgccttcac gtcttgggcg gtgaatgcca tgtcatctcc tgatcgttgg
     2761 ggattcagac catcagccat cagcgggcgg accctctgat ggctgatgag ggtagcgggg
     2821 gagggtctag ccctcgactt ccatcttttc ggccatcatc ttcttcatct cgtcgctgtc
     2881 gcccttgtcg cggaaggact ggcggccctc aaggatggag tcggccacgc gctcggagaa
     2941 gagcaggatg gagcggatgg cgtcgtcgtt gccgggaatg acgtagtcga tcttgtcggg
     3001 atcgcagttg gtgtcgacga tgcccacgac cttgatgccg agcttcttgg cctcggtgac
     3061 ggcgatgtcc tcgcggtgcg gatcgatgac gaagagcacg tcaggcagcg cgcgcatgtc
     3121 gcggatgccg tggaaggacg cctcgagctt gagccgggtg cggttcaggg tgagcagttc
     3181 cttcttggag agcagagccg tgcgggcggg atcggccagg gtggcttcga tctcgcggaa
     3241 cttctcgaga ctcttcttga tggtgctgaa gttggtcagc atgccgccca gc
//
LOCUS       DATGWW010000684         2210 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_134498, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000684 DATGWW010000000
VERSION     DATGWW010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134498"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..1108
                     /locus_tag="VK150_09990"
     CDS             146..1108
                     /locus_tag="VK150_09990"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HLP31682.1"
                     /translation="MRFEKQDARLGLLVLAALGLFLGLVAYKNARAVTERTYPLVVRL
                     DQMEGLAPGTDVQLKGYRVGAVERVDMRQEGKDYHFLARIAVREDIRLWRGTRANLAP
                     KGVGSVMLDLRLPEVADRTTPLAPGDEIPGDAGVSIAGVLERADRLMASLNTGVDDLR
                     ARLERKGLGDVLDHPNVKASLHSLDATLREFQALAKEGRGLMGHADRSMDGADKALAS
                     LDQSMGAVRGLLEKRGPELDQILVSLAATLKQAEAFMGRFTTEDQPELEASLKSLRRS
                     LASVEELLAILKQKPSRVVWGTPSEAERERARKAVEAGRQSPRP"
     gene            complement(1146..>2210)
                     /locus_tag="VK150_09995"
     CDS             complement(1146..>2210)
                     /locus_tag="VK150_09995"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP31683.1"
                     /translation="GIAHDMNNVLSAILGMASLLQAKHGSDPALAKSFKVIESAAGRG
                     RDLVKGLTDFARKGLQEPERMDLNALVQKELDLLIRTSRQRFTFDVHLEEGLPPIVGE
                     SSTLASAIMNLCVNAFDAMPRGGTLAINTRLEDGQVTLDVADTGEGIPAEILPRVTEP
                     FFTTKPPGRGTGLGLAMVYGTVKAHGGSLAIQSQVGKGTRITLRFPASREAVAAQDSA
                     PPPPSAEAEPPLRILVVDDDELIRSILPDMLSHMGHRVDTATGGLDALQKLNGGLRPD
                     LVILDHNMPGMSGADALPRILQACPDVQVLIATGFLDTELKLLLADFPSVLTLQKPFS
                     LIELRKILGRLRAGGPNRGA"
BASE COUNT          319 a          746 c          824 g          321 t
ORIGIN      
        1 gggccacggc cctggccgtg atcgggcgct gggccgagga tccggagaag accctgctca
       61 tcgccctgga ggcgcccggc cccttcgcgg aggtggcccc gggccgcctt gagctgcggc
      121 ccctcccgcc cgtcctggag accccatgag attcgagaag caggacgccc gccttggact
      181 gctggtgttg gccgccctcg gcctcttcct gggcctggtg gcctacaaga acgcccgggc
      241 cgtgaccgag cggacctacc cgctggtggt acgcctcgac cagatggaag gcctggcccc
      301 gggcacggac gtgcagttga agggctaccg ggtgggcgcg gtggagcggg tggacatgcg
      361 ccaggagggg aaggactacc acttcctcgc ccgcatcgcc gtgcgcgagg acatccggct
      421 ctggcgcggc acccgggcga acctggcgcc gaagggcgtg ggcagcgtca tgctcgacct
      481 ccggctgccg gaggtggccg accgcaccac gcccctggcc ccgggcgacg agattcccgg
      541 cgatgccggc gtgtccatcg ccggggtgct ggagcgggcg gaccggctca tggccagcct
      601 caacaccggg gtggacgatc tgcgggcgcg cctcgagcgg aaggggctgg gcgacgtgct
      661 ggaccacccg aacgtgaagg cctccctcca ctccctcgac gccaccctgc gcgagttcca
      721 ggccctggcg aaggagggcc gcggcctcat gggccacgcg gaccgcagca tggacggggc
      781 ggacaaggcc ctggcctccc tcgaccagag catgggcgcg gtgcggggcc tgctggagaa
      841 gcgcggcccc gagctggatc agatcctcgt gagcttggcc gccactctca agcaggctga
      901 ggcgttcatg gggcgcttca ccacggagga ccagcccgag ctggaggcga gcctcaagag
      961 cctgcgccgt tccctggcct cggtggaaga gctgctggcg atcctcaagc agaagcccag
     1021 ccgcgtcgtc tggggcacac ccagcgaggc cgagcgggag cgggcccgga aggccgtgga
     1081 agctggccgg cagtcgccca ggccctgagg cggagtccca gggccacggt ggtcccttcc
     1141 ggcggtcagg ccccgcggtt gggcccgccc gctcgtagcc ggcccaggat cttgcgcagc
     1201 tcgatcaagg agaagggctt ctgcagggtc agcaccgagg ggaaatccgc cagcaggagc
     1261 ttcagctcgg tgtcgaggaa acccgtggcg atgagcacct gcacgtccgg gcaggcctgc
     1321 aggatgcggg gcagggcgtc ggcgccgctc atgccgggca tgttgtggtc gaggatcacc
     1381 aggtccggcc gcaggccgcc gttcagcttc tgcaaggcgt ccaggccgcc cgtggcggtg
     1441 tccacccggt ggcccatgtg ggagagcatg tcgggcagga tgctgcggat cagttcgtcg
     1501 tcgtcgacca cgaggatgcg cagcggcggc tcggcctcgg ccgacggtgg cggaggggcg
     1561 gaatcctgag ccgcgacggc ttcccggctc gcggggaacc ggagggtgat ccgggtgccc
     1621 ttgcccacct ggctctggat cgcgaggctg cccccgtgag ccttcacggt gccatagacc
     1681 atcgccaggc ccaggcccgt gccgcgtcca ggcggcttgg tggtgaagaa cggctccgtc
     1741 acccggggca ggatctcggc cggaatgccc tcgcccgtgt cggccacatc cagcgtcacc
     1801 tggccgtctt ccaggcgggt gttgatggcg agggtgcccc cccgaggcat ggcgtcgaag
     1861 gcgttcacgc agaggttcat gatggcgctg gccagggtgc tcgactcgcc cacgatcggc
     1921 ggcagaccct cctccaggtg gacatcgaac gtgaaccgct ggcggctcgt gcggatgagc
     1981 aggtccagct ccttctggac cagggcgttc aagtccatgc gttcgggttc ctggaggccc
     2041 ttccgtgcga agtcggtgag tcccttcacc aggtcgcggc cgcggccggc ggcgctctcg
     2101 atcaccttga aggacttcgc cagggcggga tccgacccgt gcttggcctg caggagggag
     2161 gccatgccga ggatggcgga caggacgttg ttcatgtcgt gggcgatgcc
//
LOCUS       DATGWW010000685         2001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_216707, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000685 DATGWW010000000
VERSION     DATGWW010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216707"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..1191)
                     /locus_tag="VK150_10000"
     CDS             complement(64..1191)
                     /locus_tag="VK150_10000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31684.1"
                     /translation="MRLPVLTLLLATALLPAQAPAKAKAKTAPKAAAPKPTPESEAAR
                     RTLRETLDAVDAGWFGQPYQGVTSVQMQGTLGIALSGAAVNQKVDTLSQGQAKGNSQG
                     GQANLRVKGTYFANGDFKTDLAGDFGTILYTRRGTRGFIYSKEQNAYTTRVDLPPSDA
                     PLTYMAWFRQTLNDIKAVYVDSPVFQASLGPEESVGGKAAQRLVFNAPTQGWDAKKRE
                     QSLAQSLGFWKRGKLEVTVDKASKQPQRLEFRNDEQGVHTRMEFSYGSNGRLQSVNIN
                     NSSRGFEGPGWLRLGYGGEGLMSNVAGELASQDKRVSFAMDLAWSKTRTAAEIAAIPP
                     AGATKRGREEMETQLLVGLAAKIFDLQRAGLNLRSVAISGK"
     gene            complement(1210..1536)
                     /locus_tag="VK150_10005"
     CDS             complement(1210..1536)
                     /locus_tag="VK150_10005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31685.1"
                     /translation="MLLTKRAPVAPPDPKAPREKICAECGLHFKVESGQKFYLCPDCY
                     RRSFTYKRKGGKDAARILTHITCAACGAQEYLPFIPDDPAKALCRACFAKQRPEPKDP
                     PRHPHR"
     gene            1745..>2001
                     /locus_tag="VK150_10010"
     CDS             1745..>2001
                     /locus_tag="VK150_10010"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF015279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HLP31686.1"
                     /translation="MPAPPDLLEPLRRGEPRALGRAISWMENGHPGARDLMASLWPHL
                     GRATVIGITGSPGAGKSTLTDQLARTLRAEGQKVGILAVDPT"
BASE COUNT          267 a          629 c          752 g          353 t
ORIGIN      
        1 cctctgctcc caaagcagat gcgctaccag gctgcgccac gccccgatgg ttccagtcta
       61 gccttacttg ccgctgatcg cgacgctgcg gaggttgagg ccggcgcgct ggaggtcgaa
      121 gatcttggcg gccaggccta ccaggagctg ggtttccatc tcttcgcggc cgcgcttggt
      181 ggcgccggcg ggggggatgg cggcgatctc ggcggcggtg cgggtcttgg accaggccag
      241 gtccatggcg aaggacacgc gcttgtcctg gctggcgagt tcaccggcca cgttggacat
      301 gagcccctcg ccgccgtagc ccaggcgcag ccagcccgga ccctcgaagc cccggctgct
      361 gttgttgatg ttcacggact gcagccggcc gttggatccg tagctgaatt ccatccgggt
      421 gtggacgccc tgctcgtcgt tgcggaactc gaggcgctgg ggctgcttgc tggccttgtc
      481 cacggtgact tccagcttgc cgcgcttcca gaagcccagg ctctgggcca ggctctgctc
      541 gcgcttcttg gcatcccaac cctgggtggg ggcgttgaac accaggcgct gggccgcttt
      601 gccgccgacg gattcctcgg ggccaaggct ggcctggaag acgggagaat ccacgtagac
      661 ggccttgatg tcgttcaggg tctggcggaa ccaggccatg taggtgagcg gggcgtcgga
      721 ggggggcagg tccacgcggg tggtgtaggc gttctgctcc ttgctgtaga tgaagccccg
      781 ggtgcctcgg cgcgtgtaga ggatggtgcc gaaatcgccc gccaggtcgg tcttgaagtc
      841 gccgttggcg aagtaggtgc ccttcacgcg caggttggcc tggccgccct ggctgttgcc
      901 cttggcctgg ccctggctga gggtatccac cttctggttc accgcggcgc cgctcagggc
      961 gatgcccagg gtgccctgca tctgcacgga ggtgacgccc tggtagggct ggccgaacca
     1021 gccggcgtcg acggcgtcca aggtctcgcg cagggtgcgg cgggcggctt cggattcggg
     1081 ggtgggcttg ggggcggcgg ccttcggggc ggtcttggct ttggccttgg ccggggcctg
     1141 agccggcagg agggcggtgg cgagcagcag ggtcagaacg ggcaggcgca tgaaagatcc
     1201 tcggaggggc taacgatgag ggtgccgggg ggggtccttt ggttccggcc gctgcttggc
     1261 gaagcaggcc cggcacaggg ccttggccgg atcatcgggg atgaagggca ggtattcctg
     1321 ggccccgcag gcggcgcagg tgatgtgggt caggatgcgg gccgcatcct tgccgccctt
     1381 gcgcttgtag gtgaaggagc ggcggtagca gtccgggcag aggtagaact tctggcccga
     1441 ctccaccttg aagtgcagcc cacactcggc gcagatcttc tcccgggggg ccttggggtc
     1501 cggcggcgcc acgggggccc gcttggtcag cagcacggag ggtcgcttcg caaccggttc
     1561 ggaaaccgcg tccccggatt cggggtcttg ggaggctttg ggccctttga tcatcaaggt
     1621 tgcttccaga gcggccgggg ccgaaggatc agggtacccc atccgaaggg gggcggcgag
     1681 ttctggtcct ccccggaccc attccaatgg gttgaaccag cctccggtct ggcatcctgg
     1741 gcgcatgccc gccccgcccg acctcctgga gcccctgcga cgcggggagc cgcgcgcgct
     1801 gggtcgcgcc atctcctgga tggagaatgg ccaccccggc gcccgggacc tcatggcctc
     1861 cctgtggccc cacctgggcc gggcaaccgt gatcggcatc acggggtccc ccggggccgg
     1921 caagagcacg ttgacggatc agctggcccg gacgctgcgc gccgaaggcc agaaggtggg
     1981 catcctcgcg gtggatccca c
//
LOCUS       DATGWW010000686         1571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_401877, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000686 DATGWW010000000
VERSION     DATGWW010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401877"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..438
                     /locus_tag="VK150_10015"
     CDS             <1..438
                     /locus_tag="VK150_10015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31687.1"
                     /translation="PDVGDELTRLLYSMYLSYLPTDRFAYALDTRRDPRGWLAEVLRG
                     PAMGQIFVSVTRPGIARGNHWHHTKTEKFLVVSGEAVVRFRQLSGTEILEYPVSGAEP
                     RVVDIPPGYTHSITNTGTTDVITLFWASEPFDPGRPDTYALPV"
     gene            486..>1571
                     /locus_tag="VK150_10020"
     CDS             486..>1571
                     /locus_tag="VK150_10020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31688.1"
                     /translation="MGARTFLDAQRVRFHDNRQLLGSVAALFGGNITSSLLGALGGLL
                     VARFVGPDVTGAYRVFTIPLMYMTFLHLGTFDGLWRQIPFYMGRNQPEKVEALASAAG
                     AWNLLVSVLVTLGFLVCALRALVRGDMVGLVGWVSQMLCCWGVYYGGYLSATYRTIHQ
                     FVTLAKVQLVQAVVNFTLVFIVPLLGFFGLCIRAAVPAALGVALFHRSRPLKIRHRFD
                     WKALGEVVKVGLPFSFWGSLYTSIWTATESALMLSLGGLTGLGLFAVAAVMRDGMNVL
                     PMSVYQVLTPRVVEAYAREGSVRSANARSLLVTAGLTGVMAVIVLICTALLDLLVPVA
                     IPKYAGGIPLMKVCLWFAVIQAAALPFN"
BASE COUNT          203 a          553 c          520 g          295 t
ORIGIN      
        1 cccgacgtgg gcgacgagct cacgcgcctg ctctactcga tgtacctcag ctacctgccg
       61 accgaccgct tcgcctatgc gctggacacc cggcgggatc cgcggggctg gctggccgag
      121 gtgctgcggg gcccggccat ggggcagatc ttcgtctccg tcacccggcc gggcatcgcc
      181 cggggcaacc actggcacca caccaagacg gagaagttcc tggtggtgag cggggaggcg
      241 gtggtgcggt tccgccagct ctcgggcacc gagatcctcg agtaccccgt ctccggcgcg
      301 gagccccggg tggtggacat cccgccgggc tacacgcaca gcatcacgaa cacgggcacc
      361 accgacgtca tcacgctctt ctgggccagc gagcccttcg atccagggag acccgacacc
      421 tatgcccttc ctgtctgagg gttccgcagg ccgccggaac aaagggatct cccgcagggt
      481 ccgccatggg cgctaggacc ttcctggacg cccagcgggt ccggttccac gacaaccggc
      541 agctcctcgg ttccgtcgcg gcgctcttcg ggggcaacat cacctcgtcg ctgctgggcg
      601 ccctgggcgg gctgctggtg gcccggttcg tggggccgga tgtgaccggc gcctaccggg
      661 tcttcacgat tccgctcatg tacatgacct tcctccactt ggggaccttc gacgggctct
      721 ggcgccagat ccccttctac atggggcgga accagcctga gaaggtggag gccctcgcct
      781 cggccgcggg ggcctggaac ctcctggtgt ccgtcctggt gacgctcggc ttcctggtct
      841 gcgccctgag ggccctggtg cgtggcgaca tggtgggcct ggtgggctgg gtgtcgcaga
      901 tgctctgctg ctggggtgtc tactacggtg gctatctcag cgccacctac cgcaccatcc
      961 atcagttcgt gaccctggcg aaggtgcagc tggtccaggc cgtggtcaac ttcacgctgg
     1021 tcttcatcgt gccgctcctg ggctttttcg ggctgtgcat ccgcgcggcg gtgccagccg
     1081 ccctcggcgt ggccctcttc catcgcagcc ggccgctgaa gatccgccat cgcttcgact
     1141 ggaaggccct tggggaagtg gtcaaggtcg ggcttccctt cagcttctgg ggcagcctct
     1201 acacctccat ctggacggcc acggaaagcg ccctgatgct ctccctgggc gggctcaccg
     1261 gcctggggct cttcgccgtg gccgccgtca tgcgggacgg catgaacgtt ctgcccatgt
     1321 cggtctacca ggtgctgacg ccgcgcgtgg tggaggccta cgcccgcgaa ggcagcgtcc
     1381 gcagcgccaa tgcccgctcc ctcctggtca ccgccggcct gaccggggtg atggcggtca
     1441 tcgttctgat ctgcacggcc ctgttggatc tgctggtgcc cgtggcgatc cccaagtacg
     1501 ccggcggcat ccccctgatg aaggtttgcc tctggttcgc ggtgatccag gccgccgccc
     1561 tgccgttcaa c
//
LOCUS       DATGWW010000687         2242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_401908, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000687 DATGWW010000000
VERSION     DATGWW010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401908"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..375)
                     /locus_tag="VK150_10025"
     CDS             complement(<1..375)
                     /locus_tag="VK150_10025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31689.1"
                     /translation="MKRGEYRPGPRQWGWLGLIIFIFQFSIFNQGTSLAAKKDYDREI
                     SRQKRELDDIRDRLQREQQALANLKERQESTLGTLERLAENIRLAEEYLDKLDSTEQT
                     LERSLAGARADLGEVERRIGERD"
     gene            complement(439..1317)
                     /locus_tag="VK150_10030"
     CDS             complement(439..1317)
                     /locus_tag="VK150_10030"
                     /inference="COORDINATES: protein motif:HMM:NF037183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HLP31690.1"
                     /translation="MKHQIGYLFAEAFRGFRSDKFLSITSVITIGICTSVFAALLLAF
                     FLVRSLGGGGGQDSLVRVFPSPQAEDQASLDGLEARLRRLPGLDSIVFVSKDDALIEF
                     RRDFGEEMIRSLDWNPLPHSFLLYPAEGYRSAAQNRILVDQLKSMPEVEEASANSLYL
                     AWVDKWRLPVQAGSTLLMLLVGGALSLIIHNAVKLNLYSRRILVENMKYCGAGQLFIL
                     APFLLEGLILGIGGSLIGVATLAFLVALAGLVSPTLPGQVDFLGVSAALLGSTALIAG
                     VASARTVRQFLRGAAG"
     gene            complement(1429..>2242)
                     /locus_tag="VK150_10035"
     CDS             complement(1429..>2242)
                     /locus_tag="VK150_10035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31691.1"
                     /translation="MQSAESLAKEGQGQIAVFSKRRGAGDIALASLCRHYKANPLDSR
                     QAGKFPDAAGLAGVHDQIFPNAPHVPAVGRGEGLDNVLRYLEHDYLVKQKKNGGPLMP
                     LAIVIDDLGEFWQDSDLETAKRLAQVKQKLREINGTLWVTQMRPAPEPAPRQYLGLAD
                     HLLALDYDGSLESHDSGAKPPKPGEWETGFHLDLALGKLMHEISLIKIRFQAHGSHRQ
                     LLGHYVYYRAAALFHEVHPPTPQSASEIRAAAFSRSQGSGLLGQSGAGMVPG"
BASE COUNT          382 a          692 c          788 g          380 t
ORIGIN      
        1 gtcgcgctct ccgatgcgtc gctccacctc cccgaggtcg gcgcgcgcgc cggccaggct
       61 gcgctccagg gtctgctcgg tggagtccag cttatccaga tactcctccg cgaggcggat
      121 gttctccgcc aggcgctcca gcgtgccgag ggtggactcc tgcctctcct tgaggttggc
      181 cagtgcctgc tgctcgcgct gcaggcgatc gcggatgtcg tcgagttcgc gcttctggcg
      241 ggagatctcg cgatcgtaat ccttcttggc cgccagggat gtcccctgat tgaaaattga
      301 aaattgaaaa atgaaaatta taagaccgag ccagccccac tgtcgtggtc ccggacgata
      361 ttcacccctc ttcatttttc aattttcaat tttcaatttt aaatttgaaa atatggagcc
      421 gccgcggagc ggaccatctt accccgccgc ccctcgcaaa aactgcctca ccgtccgcgc
      481 gctggccacc ccggcgatca acgccgtgct ccccagtagc gccgccgaca cccccaagaa
      541 gtccacctgc ccgggcaggg tgggggagac gaggccggcg agggccacca ggaaggccag
      601 ggtggccaca ccgatgaggc tgccgccgat gccgaggatg aggccctcga ggaggaaggg
      661 ggcgaggatg aagagctggc ccgctccgca gtacttcatg ttctccacca ggatgcggcg
      721 ggagtagagg ttgagcttca ccgcgttatg gatgatgagg gacagggccc cgcccacgag
      781 cagcatgagc agggtggagc ccgcctgcac ggggaggcgc cacttgtcca cccaggcgag
      841 gtacagggaa ttggcgctcg cctcctccac ttccggcatg ctcttgagtt ggtccaccag
      901 gatgcggttc tgggccgcgg aacgatagcc ctcggcgggg taaagaagga aggagtgcgg
      961 cagcgggttc cagtccaggg atcggatcat ctcctctccg aagtcgcgac ggaactcgat
     1021 gagagcgtcg tccttgctca cgaagacgat ggagtcgagg ccgggcagcc ggcgtagccg
     1081 cgcctcgagg ccgtccaggg aggcctggtc ctcggcctgg ggcgagggga acacccgcac
     1141 caggctgtcc tgcccgccgc cgccgcctag ggagcggacc aggaagaaag ccagcagcag
     1201 cgcggcgaac accgatgtgc agatgccgat ggtgatgacg gaagtgatgg agaggaactt
     1261 gtcggagcgg aatccccgga aggcctccgc gaacaggtag ccgatctggt gcttcatccc
     1321 tctgatccgc cccgcgaatc cgccctggat gggagcgccc cgacgcgggg cgcggccgtc
     1381 cggagggacg gcgcggggag cccttaagat agcaagatgg agcgggagct agcctgggac
     1441 catgccggct cccgattgcc ccagcaggcc ggaaccttgg cttcgggaga aggcagcggc
     1501 ccgaatctcc gaggcggatt ggggcgtggg ggggtggact tcgtggaaca gggcggcagc
     1561 gcggtagtac acgtagtggc caaggagctg gcggtgcgac ccatgggcct ggaagcggat
     1621 cttgatgagg gagatctcgt gcatcagctt gcccagggca aggtccaggt ggaagcccgt
     1681 ttcccattct ccgggcttgg ggggcttcgc gccgctgtcg tgggactcca gggagccgtc
     1741 gtagtccagg gcgaggaggt ggtcggccag gcccagatac tggcgcgggg ccggctccgg
     1801 ggcgggccgc atctgggtaa cccacagggt accgttgatc tcgcggagct tctgcttgac
     1861 ctgggccagg cgcttggcgg tctccaagtc gctgtcttgc cagaactcgc cgaggtcgtc
     1921 gatcacgatg gcgaggggca tgaggggtcc cccgttcttc ttctgcttca ccagatagtc
     1981 gtgctccaga tagcgcagga cgttatccag gccctcgccg cggccgacgg ccgggacgtg
     2041 gggagcgttc gggaagatct ggtcgtgcac cccggccagc ccggcggcgt ccgggaactt
     2101 cccggcctgg cgcgaatcga gggggttggc cttgtagtgg cggcacaggg aggcgagggc
     2161 gatgtccccg gcgccgcgcc gcttggagaa gacggctatc tgcccctggc cttccttggc
     2221 gaggctctcg gcgctctgca tc
//
LOCUS       DATGWW010000688         1744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_134840, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000688 DATGWW010000000
VERSION     DATGWW010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134840"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1345
                     /gene="atpA"
                     /locus_tag="VK150_10040"
     CDS             <1..1345
                     /gene="atpA"
                     /locus_tag="VK150_10040"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF009884.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HLP31692.1"
                     /translation="LGEASTIKEGDTVKRTGKIMSVPVGPNFVGRVVDALGNPIDGKG
                     PIQAAKFNPIEQIAPGIVDRKSVHEPMQTGLKAIDSLIPIGRGQRELIIGDRQTGKTA
                     VAVDTIINQRDTGVICIYVAIGQKRSTIAQVVKTLEEYDAMKHTIVVAASASEAAPLL
                     FLAPMTGAALGEYFMWHGKDGKPAGKDNPGGHVLCIYDDLSKQAAAYREISLLVRRPP
                     GREAYPGDVFYLHSRLLERACKLSDERGAGSLTALPVIETQAGDVSAYIPTNVISITD
                     GQIFLESDLFNAGVRPAVNVGISVSRVGGSAQVKAMKSVAGTIKLDLAQYRELAAFAQ
                     FGSDLDKATLAQLNRGQRLVEILKQGQYQPMPVEKQVVIIWAATTGYVDDLPVAQVRR
                     FEAELMAYLDVNAPDVLRGIRDTKTLSDDAKAQLKTQVAAFKETFQASLNQTAGA"
     gene            1350..>1744
                     /locus_tag="VK150_10045"
     CDS             1350..>1744
                     /locus_tag="VK150_10045"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012456.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HLP31693.1"
                     /translation="MAGLQDIRRRIRSVKNTQQVTKAMKMISAVKLRKSQERLVALRP
                     YAGKMMEVVRRVVGRIKGDATIQPGPAARAFLFPREEKRIRVILVASDKGLCGGFNAN
                     VLKAANAFVAETTSEIVHLDVVGKRAAEWA"
BASE COUNT          319 a          632 c          541 g          252 t
ORIGIN      
        1 cctgggcgag gccagcacca tcaaggaagg cgacaccgtc aagcgcaccg gcaagatcat
       61 gtccgtgccc gtgggcccca acttcgtggg ccgcgtggtg gacgcactgg gcaaccccat
      121 cgacggcaag ggccccatcc aggccgccaa attcaacccc atcgagcaga tcgcccccgg
      181 catcgtggac cgcaagagcg tgcacgagcc catgcagacg ggcctcaagg ccatcgacag
      241 cctgatcccc atcggccgcg gccagcgcga gctgatcatc ggcgaccgcc agaccggcaa
      301 gaccgccgtg gccgtcgaca ccatcatcaa tcagcgcgac accggcgtga tctgcatcta
      361 tgtggccatc ggccagaagc gctccaccat tgcccaggtg gtgaagacgc tcgaggaata
      421 cgacgccatg aagcacacca tcgtggtggc ggcgtcggct tccgaagccg ccccgctgct
      481 cttcctcgcc cccatgaccg gcgcggcgct gggcgaatac ttcatgtggc acggcaagga
      541 cggcaagccc gccggcaagg acaacccggg cggccacgtg ctctgcatct atgacgatct
      601 ctccaagcag gcggcggcct accgcgaaat ctccctcctg gtgcgccgtc ctcccggacg
      661 cgaggcctac cctggcgacg tgttctacct gcactcccgc ctgctggagc gcgcctgcaa
      721 gctgagcgac gagcgcggcg cgggttcgct gacggccctg ccggtcatcg agacccaggc
      781 cggtgacgtg tccgcctaca ttcccaccaa cgtcatctcc atcaccgacg gccagatctt
      841 cctcgagagc gacctcttca acgccggcgt ccgcccggcg gtgaacgtgg gcatctccgt
      901 gagccgcgtg ggcggttccg cccaggtgaa ggccatgaag tccgtggccg gcaccatcaa
      961 gctcgacctc gcccagtatc gcgagctggc ggccttcgcc cagttcggct ccgacctgga
     1021 caaggcgacc ctggcccagc tgaaccgcgg ccagcgcctg gtggaaatcc tgaagcaggg
     1081 ccagtaccag cccatgcccg tggagaagca ggtggtcatc atctgggccg ccaccaccgg
     1141 ctacgtggac gacctgccgg tcgcccaggt gcgccgcttc gaagccgagc tgatggccta
     1201 cctggatgtc aacgccccgg acgtgctccg cggcatccgc gacaccaaga ccctcagcga
     1261 cgatgccaag gcccagctca agacccaggt ggcggccttc aaggagacct tccaggcctc
     1321 cctgaaccag accgcgggag cctagtccga tggccggtct ccaggacatt cgccgccgca
     1381 tccggtcggt gaagaacacg caacaggtca ccaaggccat gaagatgatt tccgcggtca
     1441 agctgcggaa gtctcaggag cgcctggtgg ctctgcgtcc ctacgccggg aagatgatgg
     1501 aagtcgtccg tcgcgtcgtg ggccgcatca agggcgacgc cacgatccag ccgggtccgg
     1561 ccgcccgggc cttcctgttc ccccgcgagg agaagcgcat ccgcgtgatc ctcgtggcct
     1621 ccgacaaggg actgtgcggc ggcttcaacg ccaacgtgct caaggcggcc aacgcgttcg
     1681 tggccgaaac cacctccgag atcgtccacc tggatgtggt cggcaagcgc gccgccgagt
     1741 gggc
//
LOCUS       DATGWW010000689         2645 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_402243, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000689 DATGWW010000000
VERSION     DATGWW010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2645
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_402243"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..835
                     /locus_tag="VK150_10050"
     CDS             <1..835
                     /locus_tag="VK150_10050"
                     /inference="COORDINATES: protein motif:HMM:NF037708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31694.1"
                     /translation="AAFLSGAAQSPASLFSNAAGVPTNGFAAPSTNNVVSYLTCHDNL
                     CLYDVLAMATNVPKDATGDAEILKRAKIGYAALLTSQGLAFLHAGDEMFRTKETTGGY
                     ANTKSSTGSHRSFVDNSYNASDAINLVKWSTVYAGDPIAGGFANYDATQNGYKLYTYV
                     QGLAAIRKSSNAFRLPDAARAANLTRLDPVGVGTSSLAFGYKCVASTVDASTFYVFHN
                     AGTTAQSFNVAADLSTAVLLADGAQAGLTPLVGSAVSVTTTGGVSTVTLPPLTSAILR
                     K"
     gene            complement(850..1158)
                     /locus_tag="VK150_10055"
     CDS             complement(850..1158)
                     /locus_tag="VK150_10055"
                     /inference="COORDINATES: protein motif:HMM:NF024845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HLP31695.1"
                     /translation="MPVKPSTPEETFFAQQELERERSLALAREARLRAEERRTLKDRH
                     WMRCPKCGMELLEIEHLGHKVDQCSACRGLWLDAGELETLTAAGDSGFLGSLKRVFWG
                     "
     gene            complement(1195..1725)
                     /locus_tag="VK150_10060"
     CDS             complement(1195..1725)
                     /locus_tag="VK150_10060"
                     /inference="COORDINATES: protein motif:HMM:NF017833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide biosynthesis protein"
                     /protein_id="HLP31696.1"
                     /translation="MSLPGLSAGTGRPYGTALVLLAAMSVVPGIGTVTGPLVGLASLL
                     LGVQLALGRPEPWLPAWLSRRVASAERGSRFSTWIQERCRPIMHLAPPRFPDRLAGLT
                     VAWSSLLLILPLAFVPLGNTIPSLSVGLVGAGLLAGRGPLGWLGLLLSGGYSLVLVLL
                     GETLFLAAQALIRRLT"
     gene            complement(1722..>2645)
                     /locus_tag="VK150_10065"
     CDS             complement(1722..>2645)
                     /locus_tag="VK150_10065"
                     /inference="COORDINATES: protein motif:HMM:TIGR03718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HLP31697.1"
                     /translation="FIAFVLAMLALDLGVFHRQAHKVGVKEAGVWSLVWVGCALAFNA
                     LLWNSFGSQRGMEFLTGYLIEKALSVDNIFVFVLIFGAFSVPEAYQHRVLFWGILGAL
                     VMRAIFVALGAALIASFHWVLYLFGAFLVITGIKMLLVRGGGFDPRQNPVFRLFQKLV
                     PAVETYHGPAFTVVREGRRFATPLLLVLVAVELTDLVFAVDSVPAIFAVTKDPFIVFT
                     SNIFAILGLRSLYFLLAGVVDRFHLLKVGLSLVLVFVGLKMLLVEAWKVPVTWSLAII
                     GLLVGGSIAASLLLPRKAAAPPVSRPEVEAL"
BASE COUNT          493 a          910 c          889 g          353 t
ORIGIN      
        1 tgcggccttc ctgtccggcg cggcccagag cccggcgagc ctcttctcca acgccgccgg
       61 cgtacccacg aacggcttcg ccgcgccatc caccaataac gtggtgagct acctcacctg
      121 ccacgacaac ctctgcctct acgacgtgct cgccatggcc accaacgtgc ccaaggacgc
      181 cacgggtgat gccgagatcc tcaagcgcgc gaagatcggc tacgccgcgc tgctcacctc
      241 ccagggcctg gccttcctcc acgcgggcga tgagatgttc cgcaccaagg aaaccacggg
      301 gggatatgcc aacaccaagt ccagcaccgg ctcccaccgc tccttcgtgg acaattccta
      361 caacgcctcc gacgccatca acctggtgaa gtggtccacg gtctacgcgg gggatccgat
      421 cgccggcggg ttcgcgaact atgacgccac ccagaacgga tacaagctct atacctacgt
      481 ccagggtctc gcggcgatcc gaaagagcag caacgccttc cgcctgcccg atgccgcccg
      541 tgccgccaat ttgacccgcc tcgaccccgt gggcgtgggc accagcagcc tggccttcgg
      601 ttacaagtgt gtggcctcca cggtggacgc ctcgaccttc tatgtgttcc acaacgccgg
      661 caccaccgcc cagtccttca atgtggccgc ggacctcagc acggccgttc tcctggcgga
      721 cggtgcccag gcgggcctga cgcccctggt gggatctgcc gtcagcgtca cgaccacggg
      781 gggggtcagc acggtcaccc tgccgcccct gacctcggcc atcctccgga aatagggggc
      841 atcccccggc tagccccaga acaccctctt gaggcttccc aggaagccac tgtctccggc
      901 cgcggtgagg gtctccaact ctcccgcatc cagccagagg ccccggcagg cgctgcactg
      961 gtccaccttg tggccgaggt gctcgatctc caggagctcc atgccgcact tggggcaccg
     1021 catccagtgg cgatccttga gcgtccggcg ttcttcggcg cggagccgcg cctcgcgggc
     1081 gagggcgagg ctgcgttccc gctcgagctc ctgttgtgcg aagaaggtct cctcgggggt
     1141 gctgggcttg acgggcatgg gggctccttg ggagagggga tccgggattc cggatcaggt
     1201 gagacggcga atgagcgcct gggcggcgag gaagagggtc tcccccagaa ggacgaggac
     1261 cagggaatag cctccggaga ggagcaggcc cagccaaccg agggggcccc gtccggccag
     1321 cagccccgct cctaccagac ccacggagag cgagggaatg gtgttgccaa gggggacgaa
     1381 ggccagggga agaatcagga gcaggctgct ccaggccacg gtgaggcccg cgagccgatc
     1441 cgggaagcgg ggcggcgcga ggtgcatgat cggccggcag cgctcctgga tccaggtgga
     1501 gaaccgggag ccccgttcgg cggaggccac cctccggctc agccaggccg ggagccaggg
     1561 ttccggcctg ccgagggcca gctggactcc caggaggagg ctggccaggc ccaccagggg
     1621 acccgtcacg gtgccgatgc cgggaaccac cgacatggcc gcgagcagga ccagggccgt
     1681 tccgtagggg cgtccggtgc ccgcggacag gccggggaga ctcacagggc ctcgacctct
     1741 gggcggctga ccggcggagc ggcggccttc cggggcagca gcagcgaggc cgcgatggag
     1801 ccgcccacca gcaggccgat gatggccagg ctccaggtca cggggacctt ccaggcctcc
     1861 accaggagca tcttcagacc cacgaacacc agcaccaggc tcaaccccac cttcagcagg
     1921 tggaaacggt ccaccacgcc cgccagcagg aagtagaggc tgcgcaggcc taggatggcg
     1981 aagatgttcg aggtgaagac gatgaaggga tccttcgtga cggcgaagat ggccggcacc
     2041 gagtccactg cgaacaccag gtccgtgagc tccacggcca ccagcaccag cagcaggggg
     2101 gtggcgaagc ggcgaccctc tctgaccacg gtgaacgccg ggccatggta ggtctccacg
     2161 gcgggcacca gcttctggaa gagccggaag acggggttct ggcgggggtc gaaaccgccc
     2221 ccccgcacca ggagcatctt gattcccgtg atgaccagga aggcgccgaa gaggtagagc
     2281 acccagtgga agctggcgat gagggccgcg ccgagcgcca cgaagatggc gcgcatgacc
     2341 agggcgccca ggatgcccca gaagagcacc cggtgctggt aggcctccgg gaccgaaaag
     2401 gccccgaaga tcaggacgaa cacgaagatg ttgtccacgc tcagggcctt ttcgatgagg
     2461 tagcccgtga ggaactccat gccccgctgg gagccgaagc tgttccagag gagggcgttg
     2521 aaggccagcg cgcagcccac ccacaccagg ctccagaccc ccgcctcttt gacgccgacc
     2581 ttgtgggcct ggcggtggaa gacgcccagg tccagggcca gcatggccag cacgaaggcg
     2641 atgaa
//
LOCUS       DATGWW010000690         1884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_217178, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000690 DATGWW010000000
VERSION     DATGWW010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217178"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..900)
                     /locus_tag="VK150_10070"
     CDS             complement(<1..900)
                     /locus_tag="VK150_10070"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF007128.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HLP31698.1"
                     /translation="MTRLKSLLLEKIQEQRPRTQKLTKEFADVVIDQVNIGQVIGGAR
                     DIHALVTDISYLDPQEGIRFRGKNIPETFAALPKAKGGEYPTVEAFWFFLLTGEIPTQ
                     AEADEVLADFQSRAKVPSYVFDVLKAMPKDSHPMAMLSTAVLAMQKDSLFAKQYHDMK
                     KNDYWDAMYEDASNLVARLPEVAAFIYRWKYKNGDIIAPKAGLDMGANFAHMMGIAKP
                     YDDVARMYFILHSDHESGNVSAHTTHLVASALSDAYYSFSAGLNGLAGPLHGLANQEV
                     LDWIMGFQKKLAGAEPTEENVKQA"
     gene            1191..>1884
                     /locus_tag="VK150_10075"
     CDS             1191..>1884
                     /locus_tag="VK150_10075"
                     /inference="COORDINATES: protein motif:HMM:NF022825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3187 family protein"
                     /protein_id="HLP31699.1"
                     /translation="MAWFEGFPEPLPEGASELALEATSQMLRPDLERSSDGRTFARLD
                     GEAWQLTGDWALKAGSSRVNVRIRVASRSGGIADQAMWNWHQAFNMPQGGREDAPKNR
                     LVYHLERDGRVVGDLTRPGVALMDLDVAWVRPFGTADAGGRFGASVQLPTGKQADFSG
                     SGSTDGLVGAALWRRLGHWRIFGQAERVVLGLPKDSPLRSVMDHTSFNRAWVSLGWVG
                     EGPGLLTGLGVEV"
BASE COUNT          286 a          570 c          687 g          341 t
ORIGIN      
        1 ggcctgcttc acgttctcct cggtgggctc ggcgcccgcg agcttcttct ggaagcccat
       61 gatccagtcc agcacttcct ggttggccag gccgtgcagg gggcccgcca ggccgttcag
      121 gccggcgctg aagctgtagt aggcgtcgga gagggccgag gccacgaggt gcgtggtgtg
      181 ggcgctgacg ttgccgctct cgtggtcgct gtggaggatg aaatacatgc gggccacatc
      241 gtcatagggc ttggcgatgc ccatcatgtg cgcgaagttc gcacccatgt cgagaccggc
      301 cttcggggcg atgatgtcgc cattcttgta cttccagcgg tagatgaagg cggcgacttc
      361 gggcagccgg gccacgaggt tgctggcatc ctcgtacatc gcgtcccagt agtcgttctt
      421 cttcatgtcg tggtactgct tggcgaagag gctgtccttc tgcatggcca agacggccgt
      481 ggaaagcatg gccatcgggt ggctgtcctt gggcatcgcc ttgaggacgt cgaagacgta
      541 ggacggcacc ttggcgcggg actggaagtc ggcgaggacc tcgtcagcct cggcctgggt
      601 ggggatctcg cccgtcagga ggaagaacca gaaggcctcc accgtggggt actcgccgcc
      661 cttggccttg ggcagggccg cgaaggtctc ggggatgttc ttcccgcgga accggatgcc
      721 ttcctgggga tccaggtagg agatgtcggt caccagggca tggatgtcgc gtgcgccgcc
      781 gatgacctgg ccgatgttca cctggtcgat gacgacgtcc gcgaattcct tggtgagctt
      841 ctgggttcgg gggcgctgct cctggatctt ttccaggaga agggatttga gacgggtcat
      901 gaggacctcc tgaagggacg gcgggtcgga tggaaccaag ggaccgcaat cagtatgcga
      961 gcctcatcta tcgaggtcat cgcaatcctt catgcgtatt caagaatctg gcctgtggtg
     1021 gtggcggaga cgtgtgggca gtattacgga ggtgggggtg atcttccgtg accttggtca
     1081 atctattctc gttgaaacag acaactccgc gacaggtagc ccgggcggcc atcgcactgg
     1141 cagccgcggc gttaccggcg tgggcgcagg aaaccccgcg gcccaaccgg gtggcctggt
     1201 tcgaggggtt cccggagccc ctgcccgaag gcgccagcga actggcactg gaggccacca
     1261 gccagatgct gcgccccgac ctggagcgca gctccgacgg ccggaccttc gcccggctgg
     1321 acggggaagc ctggcagctc acgggcgact gggccctgaa ggccgggtcc tcccgggtca
     1381 atgtccggat ccgggtggcg tcccggtccg ggggcatcgc cgaccaggcc atgtggaact
     1441 ggcatcaggc cttcaacatg ccacagggcg ggcgggagga tgcccccaag aaccgcctcg
     1501 tctaccacct ggagcgggac ggacgggtgg tgggcgacct cacccggcct ggggtggccc
     1561 tcatggacct ggacgtggcc tgggttcgac ccttcggcac ggcggacgcc ggcggccggt
     1621 tcggggcctc cgttcagctg cccaccggga agcaggcgga tttctcgggc agcggcagca
     1681 ccgacggcct ggtgggcgcc gccctgtggc gccggctggg ccactggcgg attttcggtc
     1741 aggccgagcg ggtggtgctg ggcctgccga aggacagccc cctccgctcc gtcatggacc
     1801 acacctcctt caaccgcgcc tgggtcagcc tgggctgggt gggggagggg ccggggctgc
     1861 tcaccgggct cggcgtggag gtga
//
LOCUS       DATGWW010000691         1507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_164611, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000691 DATGWW010000000
VERSION     DATGWW010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164611"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            408..1481
                     /locus_tag="VK150_10080"
     CDS             408..1481
                     /locus_tag="VK150_10080"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015774 - polysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HLP31700.1"
                     /translation="MSACTSPGMKLDTKPGRRETTTQVEGLSVTLRSLSAEALKPKAL
                     RPPDPTAAELLLTEKAPAYRIGPQDVLLVTVWDHPEITMPLGQFRQDTSSGILVDEGG
                     QIYFPHVGTFKVGGMTTSQVRDALTSRLSKVLQNPQIDVKVLAYRSQKIYVGGEVKAP
                     AVYTVTDVPFTLAEAVNRAGGFTPTADDSRILLTRGDKTWRLNFPALLTSGNRIGQIL
                     LRDGDSLHVPSNLENPVYMMGELLRPGTLPMQHGNLSLAQAISDTGGIQGATADARSI
                     YVIRQTGSNNAVEVFHLDARNPTAMVLADRFPLHSRDIVYVDAGTLVRFNRVMSLLIP
                     TVTAVTSTAIAVGEVDYFINRVK"
BASE COUNT          265 a          562 c          431 g          249 t
ORIGIN      
        1 gacccggtgc gcccatggat cagtcatttc ttccaagccg ttttaatcaa tagtcttacg
       61 caaaaaatcc ccatccacgt cagccggccg gtaggcgggg cgccggggcc ccggggtcga
      121 ggccccccgc aggcctggag gtggtcccat gaggttggga tggcgcctgg cgacggcaca
      181 gaaaaggagc ttaaaactta tttgcttgac ttggtaattt gcgatagctt gatgttccat
      241 tctcgcttga tacccccctt catgcatgct ctgtggaggt tttcatgcac acccctcaag
      301 gtcgctcgat gcaactgtca caggcgaccc accccgcacc gcccccatcc gggacggccc
      361 ggaggatctg gacccgcctg gggttcgcga tcccggttct gctgctcatg tccgcctgca
      421 cgtcacccgg catgaagctg gacacgaagc cggggcgccg agagaccaca acgcaggtgg
      481 agggcctttc ggtcaccctg cgctccctca gcgccgaggc cctgaagccg aaggccctgc
      541 gcccccccga cccgaccgcc gctgagctgc tcctcaccga aaaagcaccc gcctaccgca
      601 tcggccccca ggacgtgctg ctcgtcaccg tctgggacca cccggaaatc accatgcccc
      661 tgggccagtt ccgccaggac acctcctccg gcatcctcgt tgacgagggc ggccagatct
      721 acttcccgca tgtcggaacc ttcaaggtgg gcggcatgac cacctcccag gtccgggacg
      781 cgctcacctc ccgcctttcc aaggtgctgc agaaccccca gatcgacgtg aaggtcctgg
      841 cctaccggtc ccagaagatc tacgtcggcg gcgaagtgaa agccccggcc gtctacacgg
      901 tgacggatgt gcccttcacc ctggccgagg ccgtgaaccg cgcgggcggc ttcacgccca
      961 cggcggacga cagccggatc ctccttaccc ggggcgacaa gacctggcgc ctgaacttcc
     1021 cggcgctgct cacctccggc aaccgcatcg gccagatcct cctgagagat ggcgattcgc
     1081 tgcacgtccc gagcaacctg gagaacccgg tgtacatgat gggcgaactg ctccggcccg
     1141 gcaccctgcc catgcagcac ggcaacctct ccctcgcgca ggcgatctcc gacacgggcg
     1201 gcatccaggg agccaccgcg gatgcccgct ccatctacgt catccggcag acgggctcga
     1261 acaacgccgt ggaggtcttc cacctcgacg cccgcaaccc cacggccatg gtcctggccg
     1321 accgcttccc cctccactcg cgggacatcg tctacgtgga tgccggcacc ctggtccgct
     1381 tcaaccgcgt gatgagcctg ctgatcccca cggtcaccgc cgtcacctcg accgccatcg
     1441 ccgtgggcga ggtggactac ttcatcaacc gggtgaagtg agcgcttccc cagagccacc
     1501 cgcgggg
//
LOCUS       DATGWW010000692         2573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_217562, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000692 DATGWW010000000
VERSION     DATGWW010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217562"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..712
                     /locus_tag="VK150_10085"
     CDS             <1..712
                     /locus_tag="VK150_10085"
                     /inference="COORDINATES: protein motif:HMM:NF012566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31701.1"
                     /translation="FREREDILDMNEAFCGSRLTTTAFRIGGLREDLPPGFEKMVTKF
                     LAKFPACIEEYENLLSENRIWKKRTIGVAKLSAEDAIAMGVTGPVLRAAGVPYDIRKA
                     FPYAAYAEMDFEIPTRTEADTYARYLVRMAEMRQSARIIQQCMDGMPEGPVMAKLPKI
                     LKAEVNEVYHATEAPKGEIGYYLVGEKGSGNPYRFHVRAPGFINLQSLPKMAEGGLIA
                     DIVAAIGTLDIVLGEIDR"
     gene            733..1899
                     /locus_tag="VK150_10090"
     CDS             733..1899
                     /locus_tag="VK150_10090"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HLP31702.1"
                     /translation="MPTPTLTQSIVITLIQCLLVVIFVFVVVPLTVFAERKVLGHLQQ
                     RLGSTRVASGHVGITGWMNRGMWKWGRIPVLSYWRGIPGLVADVLKLILKEDILPAKA
                     DKFVFFIAPALSMVAAVVVFAAVSFVPGVFFTFPAWFPFVGGLPVSGGIADINVGLLW
                     ILGVASVGVYGIVLAGWASNSKYPLLGGLRSAAQMVSYEVPLAMSLLAPVVLSASLNF
                     GEMSARMATGLPFWGLVPQILGFLIYLTCGFAETNRLPFDMPEAENELVAGFHTEYSG
                     MKFGFFYLAEYINMTVVAALASGFFLGGPWLLPFGLQGLVNPYIPAALSWFAEPHAIF
                     FVVKIIFILFTYIWVRGTIPRYRYDQVMSVAWKYLIPMALFNLLLAAVVRCFAV"
     gene            1909..2412
                     /locus_tag="VK150_10095"
     CDS             1909..2412
                     /locus_tag="VK150_10095"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HLP31703.1"
                     /translation="MNKILRTLIPFDIAKGLAITGKHFSKVFFTANRRKVPLHIVSEY
                     PEVVAKVQPRYRGRLTLLKDEQGEIKCVCCLACEKICPTQVITIEKGKKEGRKMPFPV
                     RYDFEMERCIFCEFCVESCGFDSIILNHQFELAAYNREDFSLGMEGAGQNMFEPSPVG
                     KFSVAED"
BASE COUNT          428 a          892 c          773 g          480 t
ORIGIN      
        1 cttccgtgag cgcgaggaca tcctcgacat gaacgaggcc ttctgcggct cgcgcctcac
       61 caccacggcc ttccgcatcg gcggcctgcg cgaggacctg ccccccggct tcgagaagat
      121 ggtcacgaag ttcctcgcga agttccccgc atgcatcgag gaatacgaga acctgctcag
      181 cgagaaccgc atctggaaga agcgcaccat cggcgtggcc aagctgagtg ccgaggatgc
      241 catcgccatg ggcgtgaccg gccccgtgct gcgcgcggcg ggcgtgccct acgacatccg
      301 gaaggcgttc ccctacgcgg cctacgcgga gatggatttc gaaatcccca cccgcaccga
      361 ggccgacacc tacgcccggt acctggtgcg catggccgag atgcggcaga gtgcccgcat
      421 catccagcag tgcatggacg gcatgcccga agggccggtc atggccaagc tgccgaagat
      481 cctgaaggcc gaagtcaacg aggtctatca cgccaccgag gcgcccaagg gcgaaatcgg
      541 ctactacctc gtgggcgaga agggcagtgg caacccctac cggttccacg tgcgggcccc
      601 cggattcatc aacctccaat ccctgcccaa gatggccgag ggaggcctga tcgccgacat
      661 cgtggcggcc atcggcaccc ttgacatcgt gctcggcgaa atcgaccgat aggcgacaga
      721 ggatcccaag ccatgccgac tccgaccctg acccagtcca tcgtgatcac gctcatccag
      781 tgcctgctgg tggtgatctt cgtattcgtc gtcgtcccct tgacggtgtt cgccgagcgc
      841 aaggtgctcg gacacctcca gcagcgcctg ggctccacgc gcgtggccag cggccacgtc
      901 ggcatcaccg ggtggatgaa ccgcggcatg tggaagtggg gccgcatccc cgtcctctcc
      961 tactggcgcg gcatcccggg cctcgtggcc gacgtgctca agctcatcct caaggaggac
     1021 atcctcccgg cgaaggccga caagttcgtg ttcttcatcg cgccggccct cagcatggtg
     1081 gccgccgtgg tggtgttcgc cgccgtctcc ttcgtgcccg gcgtcttctt caccttcccc
     1141 gcctggttcc ccttcgtggg cggcctgccg gtgtccggcg gcatcgccga catcaacgtg
     1201 ggcctgctct ggatcctcgg cgtggcgagc gtgggcgtct acggcatcgt gctcgccggc
     1261 tgggcctcca actccaagta tcccctgctg ggaggcctgc gcagcgccgc ccagatggtg
     1321 agctacgaag tgcccctggc catgagcctc ctcgccccgg tggtgctgtc ggccagcctg
     1381 aacttcggcg agatgtccgc ccgcatggcc acgggcctgc ccttctgggg tctggtgccg
     1441 cagatactcg gcttcctgat ctacctcacc tgcggcttcg ccgagaccaa ccgcctcccc
     1501 ttcgacatgc ccgaagctga gaacgagctg gtggcagggt tccacaccga gtactcgggc
     1561 atgaagttcg ggttcttcta cctggccgag tacatcaaca tgaccgtggt ggcggccctg
     1621 gcctcgggct tcttcctggg tggtccctgg ctgctgccct tcgggctcca gggcctggtg
     1681 aacccctaca tcccggcggc tctctcctgg tttgccgagc cccacgcgat cttcttcgtc
     1741 gtgaagatca tcttcatcct cttcacctac atctgggtcc gcggcaccat cccccgctac
     1801 cggtacgacc aggtcatgag cgtggcctgg aagtacctga tccccatggc gctgttcaac
     1861 ctcttgctgg cggccgtcgt ccgctgcttc gccgtctagg ggccatccat gaacaagatc
     1921 ctgaggaccc tcattccctt cgacatcgcc aagggcctgg ccatcacggg caagcacttc
     1981 agcaaggtgt tcttcacggc caaccgccgg aaggtgcctc tccacatcgt ttcggagtac
     2041 cccgaggtgg tggccaaggt gcagccccgc taccgaggcc gtctcacgct tctcaaggac
     2101 gagcagggcg agatcaagtg cgtgtgctgc ctggcctgcg agaagatctg ccccacccag
     2161 gtgatcacca tcgagaaggg caagaaggag gggcgaaaga tgcccttccc cgtgcgctac
     2221 gacttcgaga tggagcgctg cattttctgc gagttctgcg tggagagctg cggcttcgac
     2281 tccatcatcc tgaaccacca gttcgagctg gcggcctaca accgggagga cttctccctg
     2341 ggcatggaag gggcgggaca gaacatgttc gagccttcgc ccgtaggcaa gttcagcgtc
     2401 gctgaagact gaccctcccc ttcgagcatc cccgaggacg cccatggaac atctcatcga
     2461 aacgatcggc cggaacatgt tcgccatctt tggcgtcatg gccctgtgcg gcgccgcgtt
     2521 catggtcgcc tccaggagtg ccgtgcacag cgtgctcggc ttcctcttcg cca
//
LOCUS       DATGWW010000693         2500 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_217978, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000693 DATGWW010000000
VERSION     DATGWW010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2500
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217978"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /locus_tag="VK150_10100"
     CDS             complement(<1..204)
                     /locus_tag="VK150_10100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31704.1"
                     /translation="MESTGYRRHVGLFSATMLIAGSMIGSGVFIVAADMVRTGRSGGF
                     LLAAWGLTAVLTLFAALSYGELAG"
     gene            584..1138
                     /locus_tag="VK150_10105"
     CDS             584..1138
                     /locus_tag="VK150_10105"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033745 - L-methionine-(R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HLP31705.1"
                     /translation="MSEGILLAKVARGTLLPEAERVARLREALPQIEAAVAGESDAVA
                     VQATLACLLWETLPQANWCGFYRRIADRLLAVGPYQGGMGCLRIPFERGVCGACARTE
                     ATQLVPDVHAFPGHIACDDATRSELVIPVKIQGRLDAVLDLDCPHPEGFSATEARILE
                     GLLARCFQGAGTGPVPSGPGAGVI"
     gene            1158..1880
                     /locus_tag="VK150_10110"
     CDS             1158..1880
                     /locus_tag="VK150_10110"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HLP31706.1"
                     /translation="MAEPSFIDQSKLRFREGEVIFRKGEMAQQMYIILSGKVRLYVSE
                     EPQGDWVEELSKGDFFGEGSLLEALPRQHTALALEDSDLIAINRGTFMRMIRQNPEVS
                     VKMMQRLAQRHRELGERVEALDASRPAKAPGGPVANLVSVLSGKPHPILSHGSLIGRF
                     DPTTGVHPDIDLTEEDHNLSVSRRHARILCEHGRYFLLEEPGVANGTFVRGERILSGE
                     PRELKQGDRVGFGMVVLFFEKT"
     gene            1918..2145
                     /locus_tag="VK150_10115"
     CDS             1918..2145
                     /locus_tag="VK150_10115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31707.1"
                     /translation="MGTDLHVELWRDEHGVIRELVQFGLDEIGGSCVIREHNSLDALD
                     GDAEEGDMVVARFGDPEDARAFLEEEGFEPV"
     gene            2171..>2500
                     /locus_tag="VK150_10120"
     CDS             2171..>2500
                     /locus_tag="VK150_10120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31708.1"
                     /translation="MNSLFNPKDREALSRRLAELEPGALRQWGRMVPAQMLLHCALGL
                     EAATGDRPMKQVFLGKVLSPFVRRLALGDRPFGRNGPTDPAYVVKDARDFETERARLA
                     KLIDRFVQ"
BASE COUNT          401 a          844 c          870 g          385 t
ORIGIN      
        1 gcccgccagc tcgccgtagc tcagggccgc gaagagggtc agcacggcgg tgaggcccca
       61 ggccgccagc aggaacccgc cggaccggcc cgtgcgcacc atgtcggcgg ccacgatgaa
      121 cacgccggac ccgatcatgg acccggcgat gagcatggtg gcggagaaca ggccgacgtg
      181 acgccggtag ccggtggatt ccatggtgcc tctcggatag atggatccac gctatcacgg
      241 catcctggcc gaagcgttcc taacggggcc cgaagatgcc gcgatggtgc cagccgggat
      301 gcaccgtaga tattggtttg tctcgcgtat cgccgcaggc gataccgaga gggaagggcc
      361 cgcagggcaa cgtggttcgt tgttcaaggg gcctgacacc gcggggcgcc tgcccggctt
      421 catccctccg ggcgaggggc ggcgggcgtc gcgatgtcgc gtcacgctcg tcgcgcgtag
      481 tacccgctac gcatctcctc gcgttcctcg cctcgctcgc ccggcgccac tcgcgtgacc
      541 ccgtgggggt ttggttggac actctacggt tagcggagga accatgagcg aaggcatcct
      601 gctggcgaaa gtggcgcggg gcaccctgct gccggaagcc gagcgcgtgg cccggctgcg
      661 cgaagccctg ccccagatcg aggcggcggt cgccggcgaa tccgacgcgg tggccgtcca
      721 ggccaccctg gcctgcctgc tgtgggagac cctgccccag gcgaactggt gcggcttcta
      781 ccgccgcatc gcggaccgcc tgctggcggt cgggccctac cagggtggca tgggctgtct
      841 gcgcatcccc ttcgagcggg gcgtctgcgg cgcctgcgcc cgcacggagg ccacccagct
      901 ggtgccggat gtccacgcct tccccggcca catcgcctgc gacgacgcca cgcgcagtga
      961 actggtgata ccggtcaaga tccaagggcg cctggacgcc gtgctggacc tggattgccc
     1021 gcacccagag ggcttctcgg ccaccgaggc ccgcatcctg gagggcctcc tcgcccgctg
     1081 tttccagggt gcggggacgg gtccggttcc ttccggccct ggggctgggg taatctaggg
     1141 aactccccgg gaaccccatg gccgaaccca gcttcataga ccaaagcaag ctgcgcttcc
     1201 gcgaaggcga ggtcatcttc cgcaagggag agatggccca gcagatgtac atcatcctct
     1261 cgggcaaggt gcggctgtac gtttcagagg agccccaggg ggattgggtc gaagagctgt
     1321 ccaagggcga cttcttcggg gaaggcagtc tgctggaggc tttgccgcgc cagcacacgg
     1381 ccctcgccct ggaggactcg gacctcatcg ccatcaaccg cggcaccttc atgcggatga
     1441 tccggcagaa cccggaagtc tccgtgaaga tgatgcagcg cctcgcgcag cgacaccggg
     1501 agctgggcga gcgggtggag gccctggacg ccagccgacc cgccaaggcg cctggcggac
     1561 cggtggccaa cctggtctcg gtgctcagcg gcaagcccca tcccatcctc tcccacggct
     1621 cgctcatcgg ccgcttcgac cccaccacgg gcgtgcaccc cgacatcgac ctgaccgagg
     1681 aggaccacaa cctcagcgtg tcccgccgcc acgcccgcat cctctgcgaa cacggccggt
     1741 acttcctgct ggaggaaccc ggcgtggcca acggcacctt cgtgcggggc gaacgcatcc
     1801 tgtcgggcga gccgcgggag ctgaagcagg gcgaccgcgt gggcttcgga atggtggtgc
     1861 tcttcttcga aaagacctaa cttttcccgg ggcgggaaaa gaccgaggag gcgcgccatg
     1921 ggcaccgacc tgcatgtgga actttggcgg gatgagcacg gcgtcatccg ggagctggtc
     1981 cagttcggcc tggatgagat cggcgggtct tgcgtgatcc gggagcacaa cagcctcgat
     2041 gcgctggacg gcgacgcgga ggagggcgac atggtggtcg cccgcttcgg cgaccccgag
     2101 gacgcacgcg cgttcctcga ggaagagggc ttcgaaccgg tatgacttcg ttccgcagtg
     2161 gaggccagag atgaattccc tcttcaatcc gaaggaccgg gaggccctgt cccgtcggct
     2221 ggcggagttg gagcccggcg ccctccggca gtgggggagg atggtcccag cccagatgct
     2281 gctccactgc gccctgggcc tggaggcggc cacgggggac cggcctatga agcaggtgtt
     2341 tctgggcaag gtgctcagtc ctttcgtccg acgcctggcc ctgggcgacc ggccctttgg
     2401 ccggaacggg cccaccgatc cggcctacgt ggtaaaggac gcccgcgact tcgagacgga
     2461 gcgcgcccgc ctcgccaagc tcatcgaccg gttcgtgcag
//
LOCUS       DATGWW010000694         2847 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_218254, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000694 DATGWW010000000
VERSION     DATGWW010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2847
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218254"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2807
                     /locus_tag="VK150_10125"
     CDS             <1..2807
                     /locus_tag="VK150_10125"
                     /inference="COORDINATES: protein motif:HMM:NF013491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HLP31709.1"
                     /translation="TVEEALEKCSNRHFDMIIVMSRLGQGGHLELSKALRKAAPRIPI
                     YLLLNDNVEVGAMDRRRQELQKHYDQIFVWNGNPEIFMAMVKFMEDRANVQNDTAVGL
                     TRVILLVEDSIRYYSRYLPILYSEILKQTTRLAKDQSMDGMTRTLSMRVRPKVILATT
                     YEEAIAFVNQYQDYLLCVITDRKYPKDGALDREAGIKLIKAVKDRNPYLPTLLQSSDP
                     FKESWATAINSGFLNKNSFTLGAELSAFFYDSLGFGDFIFRDEHGAEITRATDMEDLQ
                     AKLRTVPVESLVYHASRNHFSAWIMARGEVQVAKVLAKFRISDYRDPEEMRTFLIHVG
                     DYVQRMKTLGKVVPLLESTPKDEPNILRLAPGSMGGKGRGVAFTHSLLSRLDLDNLLP
                     EANIRIPRSAIIGTEEFNSFINRHGLRQLLQDDADDDTIKQRFLLGALSAELMAKLRM
                     FLTKHAKVPLAVRSSGLLEDSLSHPFAGLYNTFFLPNNDPDPAVREAQLTEAIKLVYA
                     SVYSKASRAYFQAIDYKIEEEQMAILIQEVSGSRFGDRFYPHLSGVAQSFNYYPVAYT
                     QPQDGIANIAVGLGKYVVEGGKAYRFAPPYPEMDMLPPKEQLRTTQKLFYALDMSRTS
                     VDLYSGEDATLLALDIQQAEKDGALQHCASVWDNNDDRIRDGLDHPGPRIVNFRNILK
                     YDQFPLARILQHLLELIREAMETPVEIEFAVNLEKDPQNGKPTFTLLQIKHQLLDNGE
                     VNLSAADLDPAEVFLFSERCVGNGTVEGLRDVVWVDPDGFDKFETLALAAQLEQLNDR
                     FRGEGGKYVLLGPGRWGSHDRHLGIPITWPMISCAQVIVEYAMENFQADASLGSHFFH
                     NVTSLNIGYFTVPYPRGSSRLDWDWLRQQPEVWRSGCLVHSRLAEPVHIVMDGRRSAS
                     AIFKRVPPPAPAEPEAEPFS"
BASE COUNT          529 a         1036 c          826 g          456 t
ORIGIN      
        1 ccaccgtgga ggaggcgctc gagaagtgct ccaaccggca cttcgacatg atcatcgtca
       61 tgagccgcct gggccagggc ggccatctcg aactgtccaa ggcgctgcgc aaagccgcac
      121 cgcgcatccc catctacctg ctgctcaacg acaacgtcga ggtcggggcc atggaccgcc
      181 gacgccagga gctgcagaag cactacgacc agatcttcgt gtggaacggc aatcccgaga
      241 tcttcatggc catggtgaag ttcatggagg accgggccaa cgtgcagaac gacacggcgg
      301 tgggcctcac ccgcgtgatc ctgctggtgg aggacagcat ccgctactac tcgcggtacc
      361 tgcccatcct ctacagcgag atcctcaagc agaccacgcg gctggccaag gaccagagca
      421 tggacggcat gacccgcacc ctctccatgc gcgttcgccc caaggtgatc ctggccacca
      481 cgtacgagga ggccatcgcc ttcgtcaacc agtaccagga ctacctgctc tgcgtgatca
      541 ccgaccgcaa gtacccgaag gacggcgccc tcgaccggga ggcgggcatc aagctcatca
      601 aggccgtgaa ggaccgcaat ccctacctgc ccaccctgct gcaatcctcc gaccccttca
      661 aggaatcctg ggccaccgcc atcaacagcg gcttcctcaa caagaactcg ttcacgctgg
      721 gcgccgagct ctccgccttc ttctacgaca gcctggggtt cggtgatttc atcttccgcg
      781 acgaacacgg cgccgaaatc acccgcgcca cggacatgga ggacctccag gccaagctgc
      841 gcactgtgcc ggtggagtcc ctggtctacc acgcctcgcg gaaccacttt tccgcctgga
      901 tcatggcccg cggcgaggtg caggtggcca aggtgctggc caagttccgc atctcggact
      961 accgcgatcc cgaggagatg cgcaccttcc tgatccatgt tggcgactac gtgcagcgca
     1021 tgaagaccct cggcaaggtg gtgcccctgc tggagtcgac ccccaaagac gaacccaaca
     1081 tcctgcgcct ggcccccggc tccatgggcg gcaagggccg cggtgtggcc ttcacccact
     1141 cgctgctttc ccggctggac ctggacaacc tgctgcccga ggccaacatc cggatccccc
     1201 gctcggccat catcggcacc gaggagttca actcgttcat caaccggcat ggcctccgcc
     1261 aactgcttca ggatgacgcc gacgacgaca ccatcaagca gcggttcctc ctgggcgcgc
     1321 tctcggcaga gctcatggcc aagctgcgga tgttcctcac caagcacgcg aaggtgccac
     1381 tcgccgtgcg gtcgtcgggc ctcctggagg acagcctctc ccaccccttc gccggcctct
     1441 acaacacctt cttcctgccc aacaacgatc ccgatccggc cgtgcgggag gcccagctca
     1501 ccgaggccat caagctggtc tacgcctcgg tgtactcgaa ggcctcgcgg gcttacttcc
     1561 aggccatcga ctacaagatc gaggaagagc agatggccat cctcatccag gaggtctccg
     1621 gcagccgctt cggcgaccgg ttctacccgc acctctccgg cgtcgcccag tccttcaact
     1681 actaccccgt ggcctacacc cagccccagg acggcatcgc caacatcgcc gtgggcctgg
     1741 gcaagtacgt ggtggagggc ggcaaggcct accgcttcgc cccgccctat cccgagatgg
     1801 acatgctgcc ccccaaggag cagctgcgca ccacccagaa gctgttctac gccctggaca
     1861 tgagccgcac ctcggtggat ctctacagcg gggaggacgc gaccctgctc gccctcgaca
     1921 tccagcaggc cgagaaggac ggggccctgc agcactgcgc ctcggtgtgg gacaacaacg
     1981 acgaccgcat ccgcgacggc ctggaccatc ccggcccgcg catcgtgaac ttccggaaca
     2041 tcctcaagta cgaccagttc cccctggccc gcatcctcca gcacctgctc gaactcatcc
     2101 gcgaggccat ggagacgccg gtggagatcg aattcgccgt gaacctggag aaggatccgc
     2161 agaacgggaa gcccaccttc acgctcctgc agatcaagca ccagctgctg gacaacggcg
     2221 aggtgaacct gtcggcggcg gacctcgacc ccgccgaggt gttcctgttc tccgagcgct
     2281 gcgtgggcaa cggcaccgtg gagggcctgc gcgacgtcgt ctgggtggat ccggatggct
     2341 tcgacaagtt cgagaccctc gccctggccg cgcagctgga gcagctcaac gaccgcttcc
     2401 gcggcgaggg cggtaaatac gtgctgctgg gccccggccg ctggggcagc cacgaccggc
     2461 acctgggcat ccccatcacc tggcccatga tctcctgcgc ccaggtcatc gtcgaatacg
     2521 ccatggagaa cttccaggcg gatgcctcgc tgggatccca cttcttccac aacgtgacgt
     2581 ccctgaacat cggctacttc acggtgccct acccccgggg ctcgagccgc ctggactggg
     2641 actggctgcg ccagcagccc gaggtgtggc ggtcgggctg cctggtgcac agccgcctgg
     2701 ccgagcccgt gcacatcgtc atggatggcc gacgcagcgc ctcggccatc ttcaagcggg
     2761 tgccgccccc ggccccggcg gaacctgagg cggaaccctt cagctaaggt cagctacttg
     2821 gcgcgggtgt actccatctc catgacc
//
LOCUS       DATGWW010000695         1741 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_165242, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000695 DATGWW010000000
VERSION     DATGWW010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165242"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..1660)
                     /locus_tag="VK150_10130"
     CDS             complement(140..1660)
                     /locus_tag="VK150_10130"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HLP31710.1"
                     /translation="MSARELPLLRNGQRLPLREVPELPIAEFREAILRRVQAGDRLVC
                     LCAGLDAEPILTAVLADDAEHGLRALRSRLDAPRYPALTPDCPQAHLFEREIAEQSGI
                     LPEGHPWLKPVRFHLPLNGAADPWNRAGGPLPGVLDYFRVEGDEVHEVAVGPVHAGVI
                     EPGHFRFQCHGERVFHLEIALGYQHRGVEQALLGGPHPLSLKQAETACGDSSIAHGWA
                     YCRLLEGLAGLEVAPRVDLVRGVALELERAANHVGDLGALSGDVGFLPTASFCGRIRG
                     DWLNLSAEGCGSRLGRDWLRPGGLRQDLEPTLAARMLPRLTQAWDETRDAVELLWGAA
                     SVMIRFEVAGRLDAAQAREIGLVGVAARACGLRRDVRHDHPFGPYGSHPVPVSLAESG
                     NVHARAWVRWLELGASSRFLERALAALADTEPPPAVPCPPLAPDHLCVSLVEGWRGEV
                     LHLAWTDAQGRFARYKIVDPSFHNWFGLALALRGEQISDFPLCNKSFNLSYCGHDL"
BASE COUNT          260 a          619 c          659 g          203 t
ORIGIN      
        1 gcagccctcg gggcagcgct ccgcctggat gtggggccgg ccccggaacc gctccggcag
       61 ggcgggcagg cgcttcgggt aggggagggt gcggtagccc tggcgccagc gggaaaggag
      121 gatgtggatc atggccgcct cacaggtcgt ggccgcagta ggagaggttg aagctcttgt
      181 tgcacagcgg gaaatccgag atctgctcgc cccgaagcgc cagggccagg ccgaaccagt
      241 tgtggaagga gggatccacg atcttgtagc gggcgaagcg gccctgggcg tcggtccagg
      301 ccaggtggag cacctctccg cgccatccct ccacgaggga gacgcacaga tggtccgggg
      361 ccaggggtgg acacgggacg gccggtggcg gctccgtgtc cgccaacgcg gccagggccc
      421 gctcgaggaa ccgggaggag gcgcccagct ccagccagcg cacccaggcg cgggcgtgca
      481 cgttgccgct ctcggccaga gacaccggca cgggatgcga tccgtagggc ccgaatggat
      541 ggtcgtggcg cacgtcccgg cgcagaccgc aggcccgcgc cgccaccccc accagcccga
      601 tctcccgggc ctgcgccgca tccaggcgcc cggccacctc gaagcggatc atcaccgagg
      661 cggcgcccca gagcagctcc accgcgtccc gggtctcgtc ccaggcctgg gtcagccgag
      721 gaagcatgcg ggcggccagg gtcggctcca ggtcctgccg cagccctccc ggacgcagcc
      781 agtcgcggcc caggcggctg ccgcagcctt cggcgctcag gttcagccag tcgccgcgga
      841 tgcgcccgca gaaggaggcg gtgggcagga agcccacgtc gccggacagg gcgccgaggt
      901 cccccacgtg gttggcggcc cgctcgagtt ccagggccac gccccgcacc aggtccaccc
      961 ggggcgcgac ctccagaccc gccaggccct ccagcaggcg gcagtaagcc cagccatggg
     1021 cgatgctgct gtccccgcag gccgtctccg cctgcttcag gctgaggggg tgggggccgc
     1081 ccagcagggc ctgctccacg ccgcggtgct ggtagcccaa ggcgatctcc aggtggaaca
     1141 cgcgctcgcc gtggcactgg aaccggaagt ggccgggctc gatgaccccg gcatgaaccg
     1201 gccccaccgc gacctcatgg acctcgtcgc cctccacccg gaaatagtcc agcacaccgg
     1261 gaaggggccc gcctgcgcgg ttccagggat ccgccgcccc gttcaggggc aggtggaacc
     1321 gcacgggctt cagccaggga tggccctcgg gaaggatgcc gctctgctcg gcgatctccc
     1381 gctcgaagag gtgggcctgg gggcagtccg gcgtaagggc cgggtagcgg ggcgcgtcga
     1441 ggcgggagcg gagcgcgcgc agcccgtgct ccgcatcgtc ggccagcacc gcggtgagga
     1501 tgggttccgc gtccaggccg gcgcacaggc agacgaggcg gtcccccgcc tggacccggc
     1561 gcaggatggc ctcccggaac tcggcgatgg gaagctccgg cacctcccgc agggggaggc
     1621 gctggccgtt gcgcaggagg ggcagctcgc gggcgctcat ggctgaacct ccaaccgggc
     1681 ggaaaggacg ccctcgaccg tggcggtggc gtggtcgagc atgttctgca gcggccgggg
     1741 c
//
LOCUS       DATGWW010000696         1578 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_403484, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000696 DATGWW010000000
VERSION     DATGWW010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403484"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /gene="folK"
                     /locus_tag="VK150_10135"
     CDS             <1..446
                     /gene="folK"
                     /locus_tag="VK150_10135"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HLP31711.1"
                     /translation="NLGDRRAHLDAGLAALRTLGAVVPSPLVMETPDESGRGPAYLNT
                     VAILVTEEADPCRLLEALLRLELTAGRDRSAGRNAPRTLDLDLITTDDSPGSWTWDSP
                     EDLRALGPTLSLELPHPRAFSRPFVLEPWRALSDPGTCRGVIPRN"
     gene            complement(521..>1578)
                     /locus_tag="VK150_10140"
     CDS             complement(521..>1578)
                     /locus_tag="VK150_10140"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HLP31712.1"
                     /translation="QWQGADLVGTCDRQAHTDLFRWDGKAVQRLSTDLHVEGFALGKD
                     QAVVACSSLTTPPDLYTLDLKTGKAARATSHNEALAAELGLNKGEDLWVDTVPVDGKP
                     TKAHAFLVKPVGYDPAKTYPVAFVIHGGPQGAWADAWHPRWNAQAWASRGFITVLPNP
                     RGSTGFGQAYCDAISGDWNGAVMTDLMNTLDAALKAVPNADPKRVVAAGGSYGGYAVN
                     WIAGHYPERFAGFVTHASIFNTESMQLGTEELWFPHWEFKGWPWESAETKARWQSQSP
                     SSAIARMTKPMLVIHGELDYRVPVTEAFQLYNTLQVRGVPSQLLYFPDEAHFVAKPQN
                     SKLWYETVLGWCEKWTK"
BASE COUNT          231 a          506 c          567 g          274 t
ORIGIN      
        1 cgaacctcgg agatcgccgg gcgcacctgg atgcgggtct cgccgcgctg cgcacgctgg
       61 gtgccgtggt gccgtcgccg ctggtgatgg agacgccgga cgagtcgggc cgcggtcccg
      121 cctacctgaa caccgtggcc atcctggtga cggaggaggc tgatccctgt cgtctgctgg
      181 aagccctcct ccgcctggag ctgacggcgg ggcgggaccg ttcggcgggc cggaacgcgc
      241 cacggacgct cgacctcgac ctcatcacca cagacgattc acccggtagc tggacctggg
      301 attcgcccga ggatctgagg gccctgggcc ccacgctgag cctggagctg ccccatcccc
      361 gcgccttcag ccgtcccttc gtgctggaac cctggcgcgc gctctccgat ccaggaacct
      421 gtcgcggagt gatcccgagg aactgaccac caccaaggca ccaagaaaag caaaagccgt
      481 tcttggtgcc ttggtgtctt gatggttcaa atgcagtgaa tcacttcgtc cacttctcgc
      541 accaccccag cacggtctcg taccagagct tgctgttctg gggcttggcg acgaagtggg
      601 cctcgtcggg gaagtagagc agctggctgg ggacgccgcg cacctgcagg gtgttgtaga
      661 gctggaaggc ctcggtgacg ggcacgcggt agtccagttc gccgtggatg acgagcatgg
      721 gcttggtcat ccgggcgatg gcgctgctgg ggctctggga ctgccagcgg gccttggtct
      781 cggcgctttc ccagggccag cccttgaact cccagtgggg gaaccacagc tcctcggtgc
      841 ccagttgcat ggattcggtg ttgaagatgc tggcgtgggt cacgaagccg gcgaagcgct
      901 ccgggtagtg cccggcgatc cagttcaccg cgtagccgcc gtagctgccg ccggccgcca
      961 ccacacgctt gggatcggca ttgggcacgg ccttcagggc cgcgtccagg gtgttcatga
     1021 ggtcggtcat gaccgcgccg ttccagtcgc cgctgatggc atcacagtag gcctggccga
     1081 agcccgtgga gccgcggggg ttgggcagca cggtgatgaa gccgcggctg gcccaggcct
     1141 gggcgttcca ccggggatgc caggcatcgg cccaggcgcc ctggggcccg ccgtggatga
     1201 cgaaggccac ggggtaggtc ttggcggggt cgtagcccac gggcttcacg agaaaggcgt
     1261 gggccttggt gggcttgcca tccacgggca ccgtgtccac ccagaggtct tcacctttgt
     1321 tcaggcccag ctccgcggcc agcgcctcgt tgtggctggt ggcgcgggca gccttgccgg
     1381 tcttgaggtc gagggtgtag aggtccggcg gcgtggtgag actggagcag gccaccaccg
     1441 cctggtcctt gccgagggcg aagccctcca catggaggtc ggtgctgagg cgctggacgg
     1501 ccttgccatc ccagcggaag aggtccgtgt gagcctgacg gtcgcaggtg ccgacgaggt
     1561 cggcgccctg ccactggt
//
LOCUS       DATGWW010000697         1932 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_403827, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000697 DATGWW010000000
VERSION     DATGWW010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403827"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..907)
                     /locus_tag="VK150_10145"
     CDS             complement(<1..907)
                     /locus_tag="VK150_10145"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HLP31713.1"
                     /translation="MRFANPQAFWLLACLPLLAGFFFYAYRKKRDALLRFAHVEMLKR
                     MTENYSQRRQVFKAGLILLAAAFAVLALARPQFGTRMELMKRRGLDVVVAMDVSLSMY
                     AEDIKPNRMARSKQEISKFVDRLAGDRVALVAYAGEAFLQCPLTSDYGAFKVFLDVLG
                     PDLIPTPGTDLGAALETALKAFDPKERKYRVVLLLTDGEDHFGRAEKAAEEAARLGAA
                     VFTVGIGTPSGVPIPLKDANGSVSYKKDHQGNVVTTHLDEVLLQKIALATGGKYYHAE
                     PGRFELEEVLQEISKMEKRELESERF"
     gene            complement(904..>1932)
                     /locus_tag="VK150_10150"
     CDS             complement(904..>1932)
                     /locus_tag="VK150_10150"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HLP31714.1"
                     /translation="SGPAGHQGGRAVIPHFHSPWFLLGLLLIPFLVWDYFHKNRQRKA
                     SIRFPSLAIVKRVPENWAYRARHILLVLRILTLSLLCVALARPQYGEALEDVTTQGVD
                     IVMVLDLSTSMKIMDFKPQNRLYVAKREIEKFILGRRHDRIGLVVFAGKAFTQCPLTL
                     DYGVLVQFLRKVDFGLMEDGTAIGTGILTATNRLRGSTAKSKVMVVLTDGENNAGEVD
                     PITAAKAAAALGIKIYTIGVGKQGEQPMEMEDPLFGKRIVSVPTKIDEPMLRTISSLT
                     EGQYWRAQDPKGLEEIYGNIDQLEKTEIKSSSYYRYHEMYRNLVFAALLFLLLEVGLA
                     NTRFMKIP"
BASE COUNT          331 a          586 c          648 g          367 t
ORIGIN      
        1 tgaaccgctc gctctccagc tcgcgctttt ccattttgct gatctcctgg agcacctctt
       61 ccagctcgaa acggcccggc tcggcgtggt agtacttacc gccggtggcg agggcaatct
      121 tctgtagcag gacctcgtcc aggtgggtag tgaccacatt gccctggtga tccttcttgt
      181 agctcacgga cccgttcgcg tccttgagag ggatgggcac gcccgagggg gtcccgatgc
      241 cgacggtgaa gaccgcggcg ccgagccgcg ccgcctcctc ggccgccttc tcggcgcggc
      301 cgaaatgatc ctcgccgtcg gtgaggagca gcaccactcg gtacttccgt tcctttggat
      361 caaaggcctt gagggctgtc tccagcgcgg ctcccaagtc ggtgcccggg gtggggatga
      421 ggtcgggtcc caacacatcc aggaagactt tgaaggcccc atagtcggag gtcagcggac
      481 attgcaggaa ggcctctccg gcataggcca ccagggccac ccggtccccc gccaaccggt
      541 cgacgaactt gctgatttcc tgcttggacc tcgccatgcg gttgggtttg atgtcctcgg
      601 cgtacatgga gagggatacg tccatggcca cgaccacgtc gaggccgcgt cgcttcatca
      661 gttccatcct ggtcccgaac tggggacggg ccagggccag cacggcgaat gccgccgcga
      721 ggaggatgag ccccgccttg aaaacctggc ggcgctggct gtagttctcc gtcatgcgct
      781 tcagcatctc cacgtgggcg aagcgcagca gggcgtcccg cttcttgcga taggcgtaga
      841 agaagaaccc cgccaggagc ggcaggcagg cgagcagcca aaaggcctgg gggttggcga
      901 atctcatggg attttcatga accgggtgtt ggcgagccct acttccagga gcaggaagag
      961 cagggccgcg aagacaaggt tgcggtacat ctcgtggtag cggtaatagc tgctggattt
     1021 gatctcggtc ttctccagct ggtcgatatt cccgtagatc tcttccaggc ccttggggtc
     1081 ctgggcgcgc cagtactggc cctcggtcag ggaggagatg gtccgcaaca tgggttcgtc
     1141 gatcttggtg ggcacgctca cgatgcgctt gccgaagaga gggtcctcca tctccatggg
     1201 ctgttccccc tgcttgccca cgccgatggt atagatcttg attcccaggg ccgcggcggc
     1261 cttggcggcc gtgatcggat ccacctcgcc ggcgttgttc tcgccgtcgg tgaggaccac
     1321 catcaccttg ctcttggcag tggagccgcg cagacgattg gtggccgtga ggatgccggt
     1381 cccgatggcg gtgccgtcct ccatgaggcc gaaatccacc ttccggagga actgcaccag
     1441 caccccgtag tcgagggtga gggggcattg ggtgaaggcc ttgccggcga agaccacgag
     1501 gccgatgcgg tcatggcggc gccccaggat gaatttttcg atttcccgct tcgctacgta
     1561 gagccggttc tggggcttga aatccatgat cttcatggac gtcgacaggt cgaggaccat
     1621 cacgatgtcc acgccctggg tagtcacgtc ctccagggcc tcgccgtatt ggggacgcgc
     1681 cagcgccacg cagaggaggg agagggtgag gatgcggagc accagcagga tatgccgagc
     1741 ccggtaggcc cagttctccg ggacgcgctt cacgatggcg agggagggga agcggatgct
     1801 cgccttgcgc tgccggttct tgtggaagta gtcccagacc aggaagggga tgaggagcag
     1861 gcccagcagg aaccacgggc tgtggaaatg ggggatcacc gcgcgccccc cttgatgccc
     1921 ggccgggccg ga
//
LOCUS       DATGWW010000698         1787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_165480, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000698 DATGWW010000000
VERSION     DATGWW010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165480"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..436)
                     /locus_tag="VK150_10155"
     CDS             complement(<1..436)
                     /locus_tag="VK150_10155"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HLP31715.1"
                     /translation="MRLNEPVTQREVLFDPEEALISKTDLKGVITYANDAFIRVSGYH
                     QGELLGQPHNLMRHPDMPPEAFKDLWKTIQTGRPWTGIIKNRCKNGDHYWVDAYVTPV
                     YSNGQLSGYQSVRTAPKRDAVEKADALYRDLREKRITKLPKHT"
     gene            686..1633
                     /locus_tag="VK150_10160"
     CDS             686..1633
                     /locus_tag="VK150_10160"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: protein motif:HMM:NF002320.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HLP31716.1"
                     /translation="MFGEMKVFSGSSHPDLAGGIATHMGMPLGRLKVTRFSNENIKVK
                     IEENVREADVFVIQSSCPPVSDNLLELLILIDALKFASAARITAVLPYFPYARSDKKD
                     EARISITARLVADLLETAGADRVLTMTLHAPQILGFFRKPADQLLATPILTNYFKSKD
                     LSNATVVATDAGAAKFAGHFAKRLSVPMAIIDKRRFDDSEKAQSVALIGDVKDRDAII
                     YDDEIATGGSIKEAARIIREFGARSVRVGVTHPVLSGNALDTLQAAELDELVVTDSIP
                     VSPAFTKAMPNLKVLSTAALFGDAILRIHGGRSISEMMD"
BASE COUNT          287 a          625 c          547 g          328 t
ORIGIN      
        1 tggtgtgctt ggggagcttg gtgatccgct tctcgcgcag atcccggtag agggcatcgg
       61 ccttctcgac cgcgtcgcgc ttgggggcgg tgcgcaccga ctggtagccg ctgagctgtc
      121 cgttgctgta gaccggggtg acgtaggcgt cgacccagta gtggtcgccg ttcttgcagc
      181 ggttcttgat gatgcccgtc caggggcggc ccgtctggat ggtcttccac aggtccttga
      241 aggcctcggg tggcatgtcg gggtgccgca tgaggttgtg gggctgaccc agcagctcgc
      301 cctggtggta gccgctgacc cggatgaagg cgtcgttggc gtacgtgatc acgcccttca
      361 ggtccgtctt ggagatcagc gcctcctcgg gatcgaacag cacctcgcgt tgggtgaccg
      421 gttcgttcag gcgcatgagg agcctccgcc gtctggatga tctgggtctc cagcaggttg
      481 cctcccagca gccccgggcg ccaggactaa atgcgatctt cttgtattct ttaattgcgt
      541 ctcaatgatg tcgctctttt ttaccagcac tccagctctg cccgccaggc ggacccgcgg
      601 ctcgcatctc ctcgacaaac cggatcgaca ggacggggcg cgggaattcc cctagactgg
      661 agtcaagact gaaacagggg cgagcatgtt cggcgagatg aaggtgtttt ccgggagcag
      721 ccacccggac ctggcggggg gcatcgccac ccacatgggc atgccgctgg gccgcctcaa
      781 ggtgacgcgg ttctccaacg agaacatcaa ggtgaagatc gaggagaacg tccgcgaggc
      841 cgacgtcttc gtcatccagt cctcctgccc cccggtcagc gacaacctgc tggaactgct
      901 catcctcatc gacgccctga agttcgcctc ggcggcccgc atcaccgccg tgctgcccta
      961 tttcccctac gcccgcagcg acaagaagga cgaggcgcgc atctccatca cggcccgcct
     1021 ggtggctgac ctgctggaga ccgccggcgc cgaccgcgtg ctcaccatga ccctccacgc
     1081 gccgcagatc ctgggcttct tccgcaagcc cgcggaccag ctgctggcca cgcccatcct
     1141 caccaactac ttcaagtcca aggatctctc caacgccacg gtggtggcca cggatgccgg
     1201 cgccgccaag ttcgcgggcc acttcgccaa gcggctgtcg gtccccatgg ccatcatcga
     1261 caagcgccgc ttcgatgatt ccgagaaggc ccagagcgtg gccctcatcg gcgacgtgaa
     1321 agaccgcgac gccatcatct acgacgacga gatcgccacc gggggctcca tcaaggaggc
     1381 ggcccgcatc atccgcgagt tcggcgcccg ctccgtgcgc gtgggcgtca cccaccccgt
     1441 gctctcgggc aacgcgctgg acacgctcca ggcggccgag ctggacgagc tggtcgtcac
     1501 cgacagcatt ccggtgtcac cggctttcac caaggccatg cccaacctca aggtgctctc
     1561 caccgcggcc ctgttcggcg acgcgatcct gcgcatccac ggaggcagga gcatcagcga
     1621 gatgatggac tgatgacgct gcgcctcggt cccatccagg cgcccccccg ccttgacctg
     1681 cttggccccc agggcgcgga gatctcacag ctattcaccc gccccttcct ggtcctgcac
     1741 cgcgcttcgg gcctctacac cgcccgcatc tgcctgctgc tgctgct
//
LOCUS       DATGWW010000699         4370 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_219389, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000699 DATGWW010000000
VERSION     DATGWW010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4370
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219389"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1609
                     /locus_tag="VK150_10165"
     CDS             <1..1609
                     /locus_tag="VK150_10165"
                     /inference="COORDINATES: protein motif:HMM:NF024947.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SbcC/MukB-like Walker B domain-containing
                     protein"
                     /protein_id="HLP31717.1"
                     /translation="HRALQERRLAAHAARLARDLDPGQPCPVCGSEAHPNLAKTSADL
                     PDEQDLRLAMELQEDAETALARAQDTTASRGGTLEVARARRQDLLEALGEHADISLEA
                     LTAIEARHREEFERSRTASAELAQTERHMLAAEEARNQAEARLSETNQRLSDLLVQEA
                     GAKARMQILEEELLQELRVPGALSSRRKESETELEASEAQLTAARAAREPALAAAQEA
                     RSSLRAHQAVLEEVRTESWNRNGAFEDALAAAHFHSRADYDLARRTPEEMDILARSLD
                     SHATESAAAADRAARAETQAEGLTPPDLAALQQARDAAQARFAQAAEALGRAQSERAA
                     LDRLEQELTCLTKAMGLQDRRYRAVANLARVARGDDGDRVSFERYVQGALLDDVLVSA
                     SERLRRMSKQRYALRRTATSLDQRRAGGLQLEITDTHTGRSRAVSSLSGGEGFQASLA
                     LALGLSDVVQRHAGGIRLDTVFIDEGFGSLDPEALDLALRTLEDLNQGGRLVGLISHL
                     EEVKARISARLEVTPGPGGSHARFRVE"
     gene            1680..4049
                     /locus_tag="VK150_10170"
     CDS             1680..4049
                     /locus_tag="VK150_10170"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HLP31718.1"
                     /translation="MLRFPAPLLGLAPALSLALIAQPTPYQKAPKAIQAVLDAPGTPA
                     LLASPKGDRFLLAEYVRNPSIRELAQPMARLAGLRFNPVTRGPHSPQKLKALALQKVA
                     GGPARPIALPPGVTLSQPHWSPDGARFVLLGAGRNATELWVGEASTGKLRQIQGVKLN
                     AILGSPLDWLTDGSLLCKVVPSGQGAAPAAPEVPQGPRIQENEGKAAPAPTYQDLLQN
                     AHDEDRFEFLGQAQLVRVDLASGQVTPIGKPGLYGGVQPSPNGKLLLVSRIRRPFSFL
                     VPASQFPVREEVWDRAGKLVHTAADLPLAEGIPLEGVRTGPRRLHWRPTEPATLAWVE
                     ALDGGDPKRKAEFRDRILLQTAPFSTAPTELIRLKARLSGLDWSESGDLAVVREYERD
                     RRWTRTWLLDPAKPAEARLAFDLSSNDRYKDPGAFLSRLLPNGQTALRQVDGALYLAG
                     AGASSDGDRPFLDRFDPATLKTERRFRCEPGRYESLTALLPDGRFITRRESPTEAPNY
                     LLNGDGAKPLTAFADPLPELRKIRKQLVKYTRPDGVALSFTMYLPPDYKAGERRPAVV
                     WAYPLEFTDAATAGQVSGSAQRFTTIGGMSHLFFLLSGYVVLDNATMPVVGDPKTVND
                     TFLDQVVASAKAAIDKADALGVIDPKRVGVGGHSYGAFMAVNLLAHTDLFKAGIARSG
                     AYNRTLTPFGFQSERRTLWEAPDMYLKVSPFMAANHFNAPILLIHGEADNNTGTFPIQ
                     SERLYAALKGNGQTVRYVTLPLESHGYIARESIEHTLWEMLHWFDQHLK"
     gene            complement(4154..>4370)
                     /locus_tag="VK150_10175"
     CDS             complement(4154..>4370)
                     /locus_tag="VK150_10175"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HLP31719.1"
                     /translation="DAPRFHHQWLPDRIQVEASLPAATVAALTALGHAIKVVPKQGCA
                     QVILVRRGQAEGAADTLRWPDSASVSE"
BASE COUNT          662 a         1697 c         1436 g          575 t
ORIGIN      
        1 ccaccgggcc ctgcaggagc ggcgcctggc ggcccacgcg gcccgcctcg cccgggacct
       61 cgacccgggc cagccctgcc ccgtctgcgg cagcgaggcc cacccgaacc tggcgaagac
      121 ctccgccgac ctgcccgacg aacaggatct gcgcctggcc atggaactgc aggaggacgc
      181 ggagacggcg ctggcccgcg cccaggacac caccgcctcc cgcggcggca ccctcgaggt
      241 ggcccgggcg cgccgccagg acctgctgga ggccctgggc gagcacgccg acatcagcct
      301 ggaagccctc accgccatcg aggcccggca ccgcgaagag ttcgagcgca gccgcaccgc
      361 ctcggcggag ctggcccaaa ccgagcgcca catgctcgcg gccgaggaag cccggaacca
      421 ggcggaggcc cgtctttcgg agaccaacca gcggctgtcg gacctgctgg tgcaggaggc
      481 gggcgccaag gctcgcatgc agatccttga ggaggagctg ctccaggagc tgcgggtgcc
      541 cggcgccctc tcctcgcggc gcaaggaatc cgagaccgag ctggaggcct ccgaggccca
      601 gctgaccgcg gcccgcgccg cccgggagcc cgccctggcc gcggcccagg aggcccgctc
      661 gagcctgcgc gcccaccagg ccgtgctgga ggaggtgcgg actgaatcct ggaaccggaa
      721 cggcgccttc gaggacgcgc tggccgcggc ccacttccac agccgcgccg actacgacct
      781 ggcccgccgc acgccggagg agatggacat cctggcgagg tccctcgatt cccatgccac
      841 cgaatccgcc gctgccgcgg accgcgccgc ccgcgccgaa acccaggcgg aaggcctgac
      901 gccgccggac ctggccgccc tccagcaagc ccgggacgcg gcccaggcgc ggttcgccca
      961 ggccgcggag gccctgggtc gcgcccagtc cgagcgggcc gccctggacc gcctcgagca
     1021 agaactgacg tgcctgacga aggccatggg cctccaggac cgccgctacc gggcggtggc
     1081 gaacctggcc cgcgtggccc ggggcgatga cggcgaccgc gtgtccttcg agcgctacgt
     1141 gcagggcgcc ctgctcgacg acgtgctcgt gtcggcctcc gagcgtctgc gccgcatgag
     1201 caagcagcgc tatgccctgc gccggacggc caccagcctg gatcagcgcc gggccggggg
     1261 cctgcagctg gagatcaccg acacccacac gggccgatcc cgcgccgtga gctccctgtc
     1321 ggggggcgag ggcttccagg ccagcctggc cctggccctg ggcctctccg acgtggtgca
     1381 gcggcacgcc ggcgggatcc gcctcgacac tgtgttcatc gacgagggct tcggcagcct
     1441 ggaccccgag gcgctggacc tggccctgcg caccctggag gacctgaacc agggcgggcg
     1501 cctcgtgggc ctcatcagcc acctcgagga agtgaaggcc cggatctccg cccggctgga
     1561 ggtcacgccg ggccccggcg gcagccacgc tcggttccgc gtcgagtagg caccaccccg
     1621 gggtcgacac gatgcctcgc atggcgtggt atgctccggg caccttccgg agcctcccca
     1681 tgctgcgatt tcccgcgccc ctcctcggcc tcgcccccgc cttgagcctg gccctgatcg
     1741 cccagcccac gccctaccag aaggccccga aggccatcca ggccgtgctg gacgcgccgg
     1801 gcacgcctgc gctcctcgcc agtccgaaag gcgatcgttt cctgctcgcg gagtacgtgc
     1861 gcaacccctc catccgcgag ctggcccagc ccatggcgcg gctggccggg ctgcgcttca
     1921 accccgtcac ccgaggcccc cacagccccc agaagctcaa ggccctggcc ctccagaagg
     1981 tggcgggcgg tcccgcgcgg cccatcgccc tgccgccagg cgtgacgctc agccagcccc
     2041 actggtcgcc ggacggggcg cggttcgtcc tgctcggcgc gggccggaat gccacggaac
     2101 tctgggtggg cgaggcaagc accgggaagc tgcgccagat ccagggcgtg aagctgaacg
     2161 ccatcctggg cagtcccctc gactggctca cggacggcag cctcctgtgc aaggtcgtgc
     2221 ccagcggcca gggcgcggcg cccgcggccc ctgaggtgcc ccagggcccg cgcatccagg
     2281 agaacgaggg gaaggcggcc ccggcgccca cctaccagga tctgctccag aacgcccatg
     2341 acgaggaccg cttcgagttc ctcgggcagg cacagctggt tcgggtcgat ctggcgagcg
     2401 gccaggtgac gcccatcggc aagcccggcc tctacggggg ggtgcagccc tccccgaatg
     2461 gcaagctgct gctggtgtcg cggatccgcc gccccttctc cttcctggtg cccgcgtcgc
     2521 agttccccgt tcgcgaggag gtgtgggacc gcgccggcaa gctggtccac accgccgcag
     2581 acctgccgct ggccgagggc atccccctcg agggcgtccg caccggcccg cgccggctgc
     2641 actggcgacc cacggagccg gccaccctgg cctgggtcga ggcgctggac ggcggcgatc
     2701 cgaagcggaa ggccgagttc cgcgaccgca tcctgctgca gactgcgccc ttctcgaccg
     2761 cccccacgga gctgatccga ctgaaggccc gtctctcggg cctggactgg agcgaaagcg
     2821 gcgacctcgc cgtggtccgc gagtatgagc gggaccgccg ctggacgcgc acctggctgc
     2881 tggatcccgc caaacccgcc gaggcgaggc tggccttcga tctcagcagc aatgaccgct
     2941 acaaggaccc gggcgccttc ctttcccgcc tgctgcccaa cggccagacg gccctgcggc
     3001 aggtggacgg ggccctctac ctcgccggcg ccggggcctc ctccgacggc gaccgcccct
     3061 tcctcgatcg cttcgatccc gcgaccctca agaccgagcg ccggttccgc tgcgagccgg
     3121 gtcgctatga atccctgacg gccctgctgc cggacggccg cttcatcacc cgccgcgaaa
     3181 gccccacgga agcccccaac tacctgctga acggcgacgg cgccaagccg ctcaccgcct
     3241 tcgcggaccc gctgcccgag ctgcggaaga tccggaagca gctggtgaag tacacacggc
     3301 ccgacggcgt ggccctcagc ttcacgatgt acctgccgcc cgactacaag gccggagaac
     3361 gccgccccgc cgtggtctgg gcctacccgc tggagttcac cgacgcggcc accgcgggcc
     3421 aggtgagcgg atcagcccag cggttcacca ccatcggcgg catgtcgcac ctgttcttcc
     3481 tgctctcggg ctacgtggtg ctcgacaacg ccaccatgcc cgtggtgggc gatcccaaga
     3541 ccgtgaacga caccttcctc gatcaggtcg tggccagcgc caaggccgcc atcgacaagg
     3601 ccgacgcgct gggcgtgatc gatcccaagc gggtgggcgt gggcggtcac agctacggcg
     3661 ccttcatggc cgtcaacctg ctggcccaca ccgatctctt caaggccggc atcgcccgca
     3721 gcggcgccta caaccgcacg ctgacgccct tcggcttcca gagcgagcgg cgcaccctgt
     3781 gggaagcacc cgacatgtac ctcaaggtct cgcccttcat ggcggccaac cacttcaacg
     3841 ccccgatcct gctcatccac ggcgaggccg acaacaacac cggcaccttc cccatccaaa
     3901 gcgagcgcct ctacgccgcc ctcaagggca acggccagac cgtgcgctac gtcaccctgc
     3961 ccctcgaatc ccacggctac atcgcccggg aatccatcga gcacaccctg tgggagatgc
     4021 tccactggtt tgatcagcat ctgaagtagg gtttctgggt gttgttttta actccgcaga
     4081 tgacgcagat aaaagcctga acgccttgtt gcgtttcatc tgcgtcatct gcggtcaatc
     4141 attcagtccc atctcactcc gacacggagg cgctgtccgg ccaccgcagg gtgtcggcgg
     4201 cgccttcggc ctgtccacgc cgcaccagga tcacctgggc gcagccctgc ttgggcacca
     4261 ccttgatggc gtgccccagg gccgtcaggg ccgccaccgt ggcggcggga agactcgcct
     4321 ccacctggat gcgatccggc agccactggt ggtggaaccg gggcgcgtcc
//
LOCUS       DATGWW010000700         3622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_404167, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000700 DATGWW010000000
VERSION     DATGWW010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3622
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404167"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..393)
                     /locus_tag="VK150_10180"
     CDS             complement(<1..393)
                     /locus_tag="VK150_10180"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLP31720.1"
                     /translation="MTYVRRPDFLPFTRPMVGEEEIAEIIDSIHSGWITTGPKSARFE
                     ECLQAYNGVPHCLAMNSATTAQEITMQVLGLQPGDEVITTSLTWVSTLSTVVLQGGVP
                     VLVDIDPVTLNIDPAKLEAAITPRTKGII"
     gene            complement(500..1942)
                     /locus_tag="VK150_10185"
     CDS             complement(500..1942)
                     /locus_tag="VK150_10185"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP31721.1"
                     /translation="MANSDQSSGPKPIPPPAKASSGPKQVPPAQPQRPQGAEMLAELM
                     QAQRQLTQAMHETRDLRAKLSRRSHQMQVLQHVSEILAATSKGGQVVSVVLDVLAQEF
                     HCQRAVVWTLEDGGSGYVPKEGTGLTRAEWSGLRLPAPNPFPDTPMVLFQSQWLESAG
                     STEPLALLRGGDGAQLYFIPFEHQLLLLGFAILAMPGDRKWEDEDLDSITILQRQAAI
                     SLYNAWLFRDLSAQRDALQRQTLELERVNDALREADQLKSEFLALTSHELRTPLTGIL
                     GFTRLVMDGLYDDAEEMRSMLQDSYSSGQHLLGLLNDILDLAKIESGKYEVHPEPFSL
                     AVLLDEVKPIAEAYPRKADVELFWPDMTDIPDVVVDPSRLKQVLLNVLSNALKFTKEG
                     SVAVQVERQPGMIALSVVDTGIGVSVEAQARLFQKFAQAEGGHSREFGGTGLGLVICK
                     HLMEMMGGSISLTSEGLGKGSTLRLTMAIA"
     gene            2032..3279
                     /locus_tag="VK150_10190"
     CDS             2032..3279
                     /locus_tag="VK150_10190"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HLP31722.1"
                     /translation="MANRAPTFSLQRVTFLSVSLVLCVQVGWWINVQIRESGRLLHAR
                     AEALNASRAEAWQMDSLSVLNAIHANPDPSSRVGSVEGRFAALPSFEQRRAAIQQRFP
                     HVAVLSRPLSPDDPALLDGAAFLSLRPEPMIELRDQRWHAVLRAATEGAFMVIAVLSG
                     FVLLYRKLAEELDLKLRQRNFTSAVTHELKTPIASLRVWTETLFTRTLPEEQRARIHG
                     LMERDLDRLNELVGNLLDVARAESGSLVLHQAPLELQPWLRGVCEAMDLRLGQGALGL
                     RLEFESKPLWVNADPKALGTVVENLLSNAFKYASEPRQTTVTLDGDGEDVLIVVSDLG
                     HGLSAKDLPRVFHRFFRVGDEMTRQVAGTGLGLFLVKEIVARHGGDVRAASRGTGLGA
                     TFTVRLPRLAPPAEEPATETADA"
     gene            3272..>3622
                     /locus_tag="VK150_10195"
     CDS             3272..>3622
                     /locus_tag="VK150_10195"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLP31723.1"
                     /translation="MPDPAARPPGETDLIQASIGGDSAAFEALVRPHLGMLFRVIERI
                     LGNEAESQDALQDALLTLHRELPGFQGASKFSTWAYRICVNQALMARRKRVRRREDGI
                     EDLMPRFGDDGHLMK"
BASE COUNT          528 a         1244 c         1256 g          594 t
ORIGIN      
        1 gatgatgccc ttggtccgag gcgtgatcgc cgcctcgagc ttcgcggggt cgatgttcag
       61 ggtgacggga tcgatgtcca ccagcaccgg cacgccgccc tgcagcacga cggtgctcag
      121 cgtgctcacc caggtgaggg aggtcgtgat cacctcgtcg ccgggctgga ggcccagcac
      181 ctgcatggtg atctcctggg ccgtggtcgc gctgttcatg gccaggcagt ggggcacgcc
      241 gttgtaggcc tggaggcatt cctcgaacct ggccgacttg ggtccggtgg tgatccagcc
      301 gctgtggatc gaatcgatga tttccgcgat ctcctcctcg ccgaccatgg gccgggtgaa
      361 ggggaggaag tcggggcgac ggacgtaggt catgaggtct ccggcagacg agcggacatt
      421 ctcccatggc ccccgcgccg gatagaagcc ggtgcaggcc tatggctgcg ccctttcgca
      481 gaccgggagg aagcggactt caggcgatgg ccatggtcag gcggagggtg ctgcccttcc
      541 ccaggccctc gctggtgagg ctgatgctgc cgcccatcat ctccatgagg tgcttgcaga
      601 tgacgagccc gagccctgtg ccgccgaact cacggctgtg gccgccctcg gcctgggcga
      661 acttctggaa gagccgggcc tgggcttcca cgctcacgcc gatgcccgtg tccaccacgc
      721 tcagggcgat catgccgggc tggcgctcga cctgcaccgc gacgctgcct tccttggtga
      781 acttcagggc gttggacagc acgttgagca gcacctgctt caggcggctc ggatccacca
      841 ccacatccgg gatgtcggtc atgtcgggcc agaacagctc gacgtcggcc ttgcgcggat
      901 aggcctcggc gatgggcttc acctcgtcga ggagcaccgc gaggctgaag ggctctggat
      961 ggacctcgta cttgcctgat tcgatcttgg ccaaatcgag gatgtcgttg agcaggccca
     1021 gcaggtgctg gcccgatgag tagctgtcct ggagcatgga ccgcatctcc tcggcatcgt
     1081 cgtagagccc gtccatgacg agacgggtga agccgaggat gccggtgagg ggggtgcgca
     1141 gctcatggct ggtcagcgcg aggaactcgc tcttcagctg gtcggcctcg cgcagggcgt
     1201 cgttcacgcg ttcgagctcg agggtctggc gctggagcgc gtcgcgctgg gcggagaggt
     1261 cgcggaacag ccaggcgttg tagagggaga tggcggcctg gcgctggagg atggtgatgg
     1321 agtcgagatc ctcgtcctcc cacttccggt cgccgggcat ggcgaggatg gcgaagccga
     1381 ggagcagcag ctggtgttcg aaggggatga agtagagctg tgcgccgtcg ccgccccgca
     1441 ggagcgccag gggttcggtg ctgccggcgg attccagcca ctggctctgg aacagcacca
     1501 tcggcgtgtc cggaaagggg ttcggggccg gcaggcggag gccggaccac tcggcgcggg
     1561 tcaggcccgt cccctccttg ggcacgtagc cggagccgcc gtcctccagg gtccacacca
     1621 cggcgcgctg gcagtggaat tcctgggcca gcacatcgag caccacgctg acgacctgcc
     1681 cgcccttgga ggtggcggcg aggatctccg agacgtgctg cagcacctgc atctggtgcg
     1741 agcggcggct cagcttggcc cgcaaatctc gggtttcgtg catggcctgg gtgagctgcc
     1801 gctgggcctg catcaactcc gccagcattt ccgccccctg cggccgctgg ggctgcgccg
     1861 gcggcacctg cttcgggccc gaactggcct tggcgggggg tggaatcggt ttgggccctg
     1921 aggactgatc ggagttggcc atgggcctcc agaatggccc gggccggcgc cactgccaag
     1981 gggctgccgg acccgccccc gccgggcccc ggattgcccc aagataggga catggcgaac
     2041 cgcgccccca ccttctccct tcagcgggtc acgttcctct ccgtgtccct ggtgctctgc
     2101 gtccaggtgg gatggtggat caatgtgcag atccgggaat ccggccgcct gctccacgcc
     2161 cgggccgagg ccctcaacgc cagccgggcc gaggcctggc agatggacag cctcagcgtg
     2221 ctcaacgcca tccacgccaa tccggatccc tcctcgcggg tgggctcggt ggagggccgg
     2281 ttcgccgccc tgcccagctt cgagcagcgc cgcgccgcca tccagcagcg cttcccgcac
     2341 gtggccgtcc tgtcccgccc cctcagcccc gacgacccgg ccctgctgga cggcgcggcc
     2401 ttcctgagcc tccgccccga acccatgatc gagctccggg accagcgctg gcacgccgtg
     2461 ctgcgggccg ccaccgaggg cgccttcatg gtgatcgcgg tcctctccgg cttcgtcctg
     2521 ctctaccgga agctggcgga ggagttggac ctgaagctgc gccagcggaa cttcacctcc
     2581 gccgtcaccc acgagctgaa gacccccatc gcctcgctgc gggtctggac ggagaccctc
     2641 ttcacgcgaa ccctgcccga ggagcagcgc gcgcgcatcc acggcctcat ggagcgcgac
     2701 ctcgatcgcc tcaacgagct ggtgggcaac cttctcgacg tggcccgggc cgagtccggc
     2761 agcctcgtgc tgcaccaggc gcccctcgag ttgcagccct ggctccgcgg cgtctgcgag
     2821 gccatggacc tgcggctggg ccagggcgcc ctgggcctta ggctggagtt cgaatcgaag
     2881 cccctgtggg tgaacgccga tcccaaggcc cttggcaccg tggtcgagaa tctcctgtcc
     2941 aacgccttca agtacgcctc cgagccccgg cagaccaccg tcaccttgga cggcgacggc
     3001 gaggacgtgc tgatcgtggt ctccgacctg ggccacgggc tttccgcgaa ggatctgccg
     3061 agggtcttcc accgcttctt ccgcgtgggt gatgagatga cccgccaggt ggccggcacg
     3121 gggctgggcc tcttcctcgt gaaggagatc gtggcccgtc acgggggcga cgtgcgggcc
     3181 gccagccgcg gcaccggcct gggcgccacc ttcaccgtgc ggctcccccg cctggcgccg
     3241 cccgctgagg agcctgcgac ggagaccgca gatgcctgat cccgccgcgc gtccgccggg
     3301 cgagacggac ctgatccagg cctcgatcgg aggcgattcg gcggccttcg aggccctggt
     3361 ccgcccccac ctcggcatgc tgttccgcgt catcgagcgg atcctgggca acgaggccga
     3421 aagccaggac gcgctccagg acgccctgct caccctgcac cgggagcttc ccggcttcca
     3481 gggcgcgagc aagttcagca cctgggccta ccggatctgc gtgaaccagg ccctcatggc
     3541 ccgccgcaag cgagtccgcc gccgggagga cggcatcgaa gatctgatgc cacgctttgg
     3601 ggacgacggg catctgatga ag
//
LOCUS       DATGWW010000701         1804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_219586, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000701 DATGWW010000000
VERSION     DATGWW010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219586"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1804
                     /locus_tag="VK150_10200"
     CDS             <1..>1804
                     /locus_tag="VK150_10200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31724.1"
                     /translation="DTFLARFLDAAPLDPVAGHIGFDHEQAWCLQALQGTPLSRLWAG
                     WGDKQRSALRDHLAAKLQGDPHPRFLHPEVITFRSGLTQIPRLIGTPPWGPEAIPLFL
                     TPTAPAPALSEDLPWTHARDLSETVARPLRGRGQELPYLKSLMLGLSAPIPMERIVLL
                     QGEEGVGKEHLAAWACAVAEGEGIWVHDLAASSEEPPGRFLGRLLESLLLGSEVDFYA
                     EKPHAAKALSLRLQAFAFLTGGRHLNGQEMGPEPEEIRAALEALDFASLQHPRLIHLS
                     GLDRATPGVLGLIRELVHASHLPWLLSLTSGAQGAGLKPLLTQLRGEPAAALVGVNRL
                     EDEDLQLVLEDLLGAHELPEAFRTELITQSLGNPGLLRNFLELAQQSGTITWERDRWI
                     LAPGQHAALKAEDDLMRQIFLGRLQRLTAASAAVVRLLALAERPLPSAALGRVLGLQG
                     DALEDALHLAEGSRLVQFQRGLARIPEPRWRELVLAHTPQPELKRLARALVSAFQEQG
                     WSSPLTLQSLASDEATALAAVLASLDKAPPGPPGETRRLVDQALQLKPAPADEARLLE
                     HLADAWASGVHAPESIQERPPGEEALEALSGALKA"
BASE COUNT          235 a          712 c          604 g          253 t
ORIGIN      
        1 gacaccttcc tggcccgctt cctggatgcc gcccccctgg accccgtggc cggccacatc
       61 ggcttcgacc atgagcaggc ctggtgcctc caggccctcc agggcacgcc gctctcccgg
      121 ctctgggccg gctggggcga caagcagcgg agtgcgctgc gcgaccacct ggccgccaag
      181 ctgcaggggg atccccatcc ccggttcctc catccggagg tgatcacctt ccggtccggc
      241 ctcacccaga tcccgcggct catcgggact ccgccatggg ggcctgaggc cattccgctt
      301 ttcctcaccc ccacggcgcc ggcgccggcc ctctccgagg acctgccctg gacccacgcc
      361 cgggacctct ccgaaaccgt cgcccggccc ctgcgggggc gtggccagga gctgccctac
      421 ctcaagtccc tcatgctggg cctcagcgct cccattccca tggaacgcat cgtactgctc
      481 cagggcgaag aaggcgtggg gaaggagcac ctggccgcct gggcctgcgc ggtggccgag
      541 ggcgagggca tctgggtgca tgatctggcc gcgtcctcgg aggagccccc cggccggttc
      601 ctgggccgcc tgctggagtc cctgctgctg ggcagcgagg tcgacttcta cgcggagaaa
      661 ccccacgccg ccaaggccct gtccctgcgc ctgcaggcct tcgccttcct caccgggggc
      721 cgccacctca atggccagga gatgggcccc gagcccgagg agatccgggc cgccctcgag
      781 gccctggact tcgcgagcct gcagcaccca cggctcatcc acctctccgg cctggaccgg
      841 gccaccccgg gggtgctggg actgatccgg gagctggtgc acgcctccca cctgccctgg
      901 ctcctctccc tcacctccgg tgcccagggc gcgggcctga aaccgctcct cacccagctg
      961 cgcggagaac ccgccgcggc cctggtgggg gtgaaccgac ttgaagacga ggacctgcag
     1021 ctggttctgg aggacctgct cggagcgcac gagctgcccg aggcgttccg caccgagctg
     1081 atcacccaga gcctcggcaa cccaggcctg cttcggaact tcctggaact ggcgcagcag
     1141 tccggcacca tcacctggga gcgggaccgg tggatcctgg cgccgggtca gcacgccgcg
     1201 ctgaaggccg aggacgatct catgcggcag atcttcctgg gccgcctgca gcgcctcacg
     1261 gccgcctccg ccgccgtggt ccggctgctg gccctcgcgg agcgtcccct gccctcggcc
     1321 gcgctgggcc gggtgctcgg cctgcagggc gacgccctgg aggacgcgct ccacctggcc
     1381 gagggttcgc ggctggtgca gttccaacgg gggctggcgc ggattccgga gccgcgatgg
     1441 cgcgagctgg tgctggccca taccccccag ccagagctca agcggctggc ccgggccctg
     1501 gtctccgcct tccaggaaca ggggtggtcc agccccctca ccctccagtc gctcgcctcg
     1561 gacgaggcca ccgcgctcgc agcggtgctc gcctccctgg acaaggcccc gccgggtccg
     1621 cccggagaga cccggcgcct ggtggaccag gccctccagc tgaagcccgc cccggccgac
     1681 gaggcccgcc tgctcgagca cctggccgat gcctgggcgt cgggggtcca cgcaccggaa
     1741 tccatccagg aacgcccgcc cggcgaggag gccctggagg ctctgagcgg ggccctgaag
     1801 gccc
//
LOCUS       DATGWW010000702         2354 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_165876, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000702 DATGWW010000000
VERSION     DATGWW010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2354
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165876"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1463
                     /locus_tag="VK150_10205"
     CDS             <1..1463
                     /locus_tag="VK150_10205"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HLP31725.1"
                     /translation="SPYPRGIGDPWIWNQAAPERENGWIDFRAFSHMSVVQGAAVGGG
                     SLIYANISTEAPRAAFDGGWPAELTYDELKPHYDRVAAFMNVMPIPAGQWTERMVFMQ
                     RSAEAIGMADRFRPLELAVSFDPDWRYKADGSTERVEASRRFVNAQGEEQGTCVHLGN
                     CDIGCEADAKNTLDRNYIPMGIRHGMEVRPLHLVRCLEPLPGGGYTVHVDRIQDGRLV
                     PGRVTATRVVIAAGSLGSTELLLRCRDLHRTLDRLSPRLGEGWCSNGDFLTPAFYPDQ
                     PALHPSKGPTISSAITFLDGSQGERFWIEDGGFPNLLANQARKLAGGRIRNLRLKLLV
                     EVLQKLLRAHPEPFPHVMPWFAQGMDRAEGVMALRRRFWLFGEKRLRLDWEVESGKAV
                     VDAIVAMHKRLTEATGGTFHTPVNWNVAHQLVTPHPLGGCNMGRGPTDGVVDHAGKVF
                     GYEGLYVADGAIIPRALGVNPSRTIGALAERVASLM"
     gene            complement(1519..>2354)
                     /locus_tag="VK150_10210"
     CDS             complement(1519..>2354)
                     /locus_tag="VK150_10210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31726.1"
                     /translation="DAEPDTAYKHLNGAVSRHYAHMIGTDLVLDAYPLGPVTKGAEGN
                     LFEIPPTIPPFGQWSIPDAVEDTTSGKFNTVAADGTPILDGKVQIRVELFDTAGAPVN
                     LGAKGIRYFVPTSTDLSGTVHTVDASTLGLVWGNTMVITLHVNNRACSASIAPPSIGG
                     VVADPCCGVLKYSVGDSVLMAWQASHPEGFATYSFGVVRGVSGVYSSGGAVGGGAFSV
                     TRTVDHLLNDNLPGGCVVGGCPVAGFSENLYVAATATDGWSRQSQYDAGAVRAFVLAP
                     K"
BASE COUNT          362 a          799 c          836 g          357 t
ORIGIN      
        1 gcagccccta tccccggggc atcggcgatc cgtggatctg gaaccaggcc gcgccggagc
       61 gggagaacgg ctggatcgac ttccgggcct tctcccacat gagcgtggtg cagggcgccg
      121 ccgtgggagg cggatcgctc atctacgcca acatcagcac cgaggcgccg cgcgccgcct
      181 tcgacggcgg ctggcccgcc gagctcacct acgatgagct gaagccccac tacgaccggg
      241 tggcggcctt catgaacgtc atgcccattc ccgccggaca gtggaccgag cgcatggtgt
      301 tcatgcagcg ctccgccgag gccatcggaa tggcggaccg cttccgccct ttggaactgg
      361 cggtctcctt cgatccggac tggcgctaca aggctgatgg ctccaccgag cgggtggagg
      421 cctccaggcg tttcgtcaat gcccagggcg aggagcaggg cacctgcgtg catctcggga
      481 actgcgacat cggctgcgag gccgacgcga agaacacgct ggaccggaac tacatcccca
      541 tggggatccg gcatggcatg gaggtgcggc ccctccatct ggttcggtgc ctggagccgc
      601 tgccaggcgg tggctatacc gtgcacgtcg accgcatcca ggacgggcgc ctggtgccag
      661 ggcgggtcac ggccacgcgg gtggtgatcg ccgcgggctc gctggggtcg acagaactgc
      721 tgctccgctg ccgagacctg caccgcaccc tcgaccgcct gagcccccgc ctgggcgagg
      781 gctggtgcag caatggcgac ttcctcacgc cggccttcta ccccgaccag cctgcgctgc
      841 atcccagcaa gggacccacg atctcaagcg ccatcacctt ccttgatggc agccaggggg
      901 agcgcttctg gatcgaggac ggcggattcc ccaacctgct ggcgaaccag gcccgcaagc
      961 tcgccggcgg gcgcatccgc aacctgcggc tcaagctcct ggtggaagtc ctccagaagc
     1021 tgctgcgcgc gcatcccgag ccattccccc atgtcatgcc ctggttcgcg cagggcatgg
     1081 accgcgccga gggcgtcatg gcgctgcgcc ggcggttctg gctcttcggc gagaagcggc
     1141 tgcgcctgga ctgggaggtg gagagcggca aggcggtggt ggacgccatc gtcgccatgc
     1201 acaagcggct caccgaggcc actggcggca ccttccacac cccggtgaac tggaacgtgg
     1261 cgcaccagct cgtgacgccc catcccctcg gcggttgcaa catggggcgc ggccccacgg
     1321 acggggtggt ggatcacgcg ggaaaggtct tcgggtacga ggggctctac gtggccgacg
     1381 gcgcgatcat cccgcgggcc ctaggcgtga accccagccg caccatcggc gcgctggctg
     1441 agcgggtggc ttcgctcatg tagccggacc aggctccggc cctccctcgc gggaaggccg
     1501 gagcctggtc ggacgccgct acttcggggc caggacgaag gcccgtacgg cgccggcgtc
     1561 gtactgggac tgccgcgacc agccgtcggt ggcggtggcg gccacgtaga ggttctcgct
     1621 gaagccggcc acggggcagc cgccgacaac acagcccccg gggaggttgt cgttgagcag
     1681 gtggtccacg gtgcgggtga cgctgaaggc accaccgccc acggccccgc cgctgctgta
     1741 gacaccgctc acgccccgca ccaccccgaa gctgtaggtg gcaaaaccct cgggatggct
     1801 ggcctgccag gccatcagca cggagtcgcc gacgctgtat ttcaggacgc cgcagcaggg
     1861 atcggccacc acgccgccga tggagggcgg agcgatggag gctgagcagg cgcggttgtt
     1921 cacgtgcagc gtgatgacca tggtgttgcc ccacaccagc cccagcgtgg aggcgtccac
     1981 ggtgtggacc gtgccgctca ggtccgtgga ggtgggcacg aagtagcgga tgcccttggc
     2041 gccgaggttg accggcgctc cggcggtatc aaacagctcc acccggatct gcaccttgcc
     2101 gtccaggatg ggcgtgccgt ccgcggccac ggtgttgaac ttgccgctgg tggtgtcctc
     2161 caccgcgtcg gggatgctcc actggccgaa gggcggaatg gtgggcggga tctcgaagag
     2221 gttgccctcg gcgcccttgg tgacggggcc caaggggtag gcgtccagca ccaggtccgt
     2281 gccgatcatg tgggcgtagt ggcggctgac ggcgccgttc aggtgcttgt aggccgtgtc
     2341 gggttcggcg tcac
//
LOCUS       DATGWW010000703         4244 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_404649, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000703 DATGWW010000000
VERSION     DATGWW010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4244
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404649"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..559)
                     /locus_tag="VK150_10215"
     CDS             complement(<1..559)
                     /locus_tag="VK150_10215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31727.1"
                     /translation="MSEITGPNDPLQTPPVVPPIQLDEPAWVPPVLPPAAEPLPPAAP
                     ALRPVPFEDMEQYDGFWARVGGMFRLVFSNPMELFDRVPVTDGLGAPWRFLLLMSIPV
                     FLIMTLVFFFVGMGIMIAALEQTGKGDSKAIAAVMPVIFGAILLLMPLFSFLGMVIGG
                     ALNHVFLWMWGGLKPGVGTSQSIRAY"
     gene            complement(587..2119)
                     /locus_tag="VK150_10220"
     CDS             complement(587..2119)
                     /locus_tag="VK150_10220"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HLP31728.1"
                     /translation="MSVPDLEAALTGARLVEEAGTLLTLGEDPDRMVVHAFERLGQLV
                     PYDLATVLLREGDGLRVAYAVGPLATPQLAEALIPVRGNLRLQNALKARSRPATFEED
                     DPGEDTFHGLLEMPHGHSCLVAPLRSRGETFGLMTLDAMVCRQYPESVLHHVGVFASL
                     LALGLKQAEHLARLAARERSLAEEVSYFREAQRSAVLQEPLRAESPAMRAILDQLRQV
                     ATTAATVLITGETGTGKEKVAQTLHHLSPRREKPFIKVNCSALPATLIESELFGHVKG
                     AFSGASSARKGRFELADGGTLFLDEIGDLPLDLQPKLLRAIQEKEIDPLGSEKPRKVD
                     VRLVAATHADLAAAVAEGRFREDLFYRLSVFPIHLPPLRERPDDIAALAEAFLERFAR
                     ENRRPPIHLPEAVREQLEAYGWPGNVRELHNVLERAAILSAGRDLRIPPGALPARAEK
                     AGKPPTWEAQERAYLERLLRHTRGKMSGADGAAALADLAPSTLLSRLEKLGLRPKDFR
                     EA"
     gene            2235..>4244
                     /locus_tag="VK150_10225"
     CDS             2235..>4244
                     /locus_tag="VK150_10225"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HLP31729.1"
                     /translation="MTHDAAHFGSYRLISRLGEGAMGEVWRALDLRLEREVALKILKD
                     ADDLRRKALIGEAKLACQLNHPNIAHIYDAGDVEGTPYIAMELVEGRTLRALVGHPMA
                     PEALQELARQAASALSHAHQKGIVHRDIKPENLLLTDEGQLKILDFGIARRGAEDLPP
                     GPTSHHMTLVERTAPGYSQGTPAYMSPEQANGQPLTGQSDQFSLGVVLYELATAVHPF
                     LRGSLVDTLYAVTRDEPRPLGEARPDLPRTLQDAIHRLMAKLPRDRFPNLQALAAGLA
                     ETTATAAVPHLSREVSALRGARKYWPLAVTGVALVVAGASVSWWISHRDASGLGEARR
                     ASREDFTRGRRVVAILPLEQLQPDAEHAWLSNSFADAMAYGLVRREDMAVVDRLRVVE
                     AMHRLGDTPGQAPKAVGELGRQLKAELLVLGSYQVVGGQLRMGVRVLDAVRGATLHQF
                     QLDRPVADLLKLEDELQQRLPQEMGLGSDPGSLRSQAKLPRTRELYTKALQVITDGNQ
                     DSVRLANTLLASAIELEPDYAPARAEYAWTLAELGATTALSQGRYDEAQALLRKGKEA
                     AEKAITLDPSASQAYRALASIHLRMGDLEGASRAALQAVRLDPADHKAYDVLADVFAG
                     LEGEDNHQASRRYFEKSLTLFPEGWQAHHRLGVLLQNEGELQAALE"
BASE COUNT          649 a         1464 c         1543 g          588 t
ORIGIN      
        1 cgtaggcgcg gatgctctgg ctggtgccca cgccgggctt gaggccgccc cacatccaga
       61 ggaagacgtg gttgagggcg cccccgatca ccatgccgag gaagctgaag aggggcatga
      121 gcagcaggat ggccccgaag atcacgggca tgacggcggc gatggccttg ctgtcgccct
      181 ttccagtctg ctcgagggcc gcgatcatga tgcccatgcc cacgaagaag aagacgaggg
      241 tcatgatcag gaagacgggg atggacatca gcagcaggaa acgccacggc gcgccgaggc
      301 cgtcggtgac gggcacgcgg tcgaagagct ccatggggtt gctgaagacc aggcggaaca
      361 ttccgcccac gcgggcccag aagccgtcgt actgctccat gtcctcgaag ggcacgggcc
      421 gcagcgccgg cgcggcgggg ggcaggggct cggcggcggg cggcagcacc gggggcaccc
      481 acgcgggctc gtccagctgg atcggcggga ccactggagg cgtctgcagg gggtcgttgg
      541 ggccggtgat ctcgctcatc cctcactccg tgacagcgtt aacctatcac gcttcgcgga
      601 agtccttcgg ccgcaatccc agtttctcca ggcgggacag gagggtcgag ggcgccaggt
      661 ccgccagggc ggcggcgccg tcggcaccgg acatcttgcc gcgggtgtgg cgcagcaggc
      721 gctcgaggta ggcccgctcc tgcgcttccc aggtgggcgg cttgccggcc ttctcggcgc
      781 gggcgggcag ggcgcccggg gggatgcgca ggtcccggcc cgccgagagg atcgccgccc
      841 gctccagcac gttgtggagc tcccgcacgt tgccaggcca gccgtaggcc tccagctgtt
      901 cgcgaacggc ctcggggagg tggatgggcg gccggcggtt ctcccgggcg aagcgctcca
      961 ggaaggcctc ggcgagggcg gcgatgtcgt cgggccgctc gcggaggggc gggaggtgga
     1021 tggggaagac gctgaggcgg tagaagagat cctcccggaa gcgcccctcg gccacggcgg
     1081 cggccagatc ggcgtgggtg gccgccacca gccgcacgtc caccttgcgg ggcttctcgc
     1141 tgcccagggg atcgatctct ttttcctgga tggcgcgcag cagcttgggc tgcaggtcca
     1201 ggggcaggtc gccgatctcg tccaggaaca gggtgccgcc gtccgccagc tcgaagcggc
     1261 ccttgcgcgc cgaggaagcg ccgctgaagg cacccttcac gtggccgaag agctcggact
     1321 cgatgagggt ggcgggcagg gcgctgcagt tcaccttgat gaagggcttc tcccggcggg
     1381 gcgagaggtg gtgcagggtc tgggccacct tctccttgcc ggtgcccgtc tcgccggtga
     1441 tgagcacggt ggccgcggtg gtggccacct gccgcagctg gtcgaggatg gcgcgcatgg
     1501 ccgggctttc ggcgcggagc ggctcctgta gcacggcgct gcgctgggcc tcgcggaagt
     1561 agctgacctc ctcggccagg ctgcgctccc gcgccgccag gcgggcgagg tgctcggcct
     1621 gcttgagccc gagggcgagc agggaggcga agacgcccac gtggtgcagc acgctctcgg
     1681 ggtactggcg gcacaccatg gcgtcgaggg tcatgaggcc gaaggtctcg ccgcggctgc
     1741 gcagaggcgc caccaggcag ctgtggccgt ggggcatctc gagcaggccg tggaaggtgt
     1801 cctccccggg atcgtcctcc tcgaaggtgg cgggccggga acgggctttc agggcgttct
     1861 gcaggcgcag gttgccccgc accgggatga gcgcctcggc cagctggggc gtggccaggg
     1921 gacccacggc gtaggccacg cggaggccgt ccccctcgcg gagcagcacg gtggccaggt
     1981 cgtagggcac cagctggccc aggcgctcga aggcgtggac caccatgcgg tcgggatcct
     2041 cgcccagggt gagcagggtg ccagcctctt ccaccagccg ggctccggtc agtgcggcct
     2101 cgagatccgg aacgctcacg ggcacctcca gactgattct cgacatttcg tgaatcggtt
     2161 caagccccct ccgaaggata aacgccgaaa cccgccgaaa ggtatacttc agcgttccct
     2221 ttcccaggat gcgcttgacc cacgatgccg cccactttgg ttcctaccgc ctgatctccc
     2281 ggctcgggga aggggcgatg ggggaagtgt ggcgcgccct ggacctgcgg ctggaacgcg
     2341 aagtggcgct caagatcctg aaggacgccg atgacctgcg ccgcaaggcg ctcatcggcg
     2401 aggccaagct ggcctgccag ctgaaccacc cgaacatcgc ccacatctac gacgcgggcg
     2461 atgtggaggg cactccctac atcgccatgg agctcgtgga ggggcgcacc ctccgggccc
     2521 tggtgggcca cccgatggcg ccggaggccc tgcaggagct ggcccggcag gcggcctccg
     2581 ccctgtcgca cgcgcaccag aagggcatcg tccaccggga catcaagccc gagaacctgc
     2641 tgctcacgga cgagggccag ctgaagatcc tcgatttcgg cattgcgcgc cggggggcgg
     2701 aagacctgcc gccggggccc acctcgcacc acatgacgct ggtggagcgg accgcgcccg
     2761 gctacagcca gggcaccccg gcctacatga gccccgagca ggccaacggc cagcccctca
     2821 ccggccagtc ggaccagttc agcctcggcg tggtgctcta cgagctggcc acggcggtgc
     2881 accccttcct ccggggcagc ctggtggaca cgctctacgc cgtgacccga gacgagccca
     2941 ggcccctcgg cgaggcgcgc cccgacctgc cgcgcaccct ccaggacgcc atccaccgcc
     3001 tgatggcgaa attgccccgg gaccgcttcc cgaatctgca ggccctggcc gcggggctcg
     3061 cggagaccac tgccaccgcc gccgtgcccc acctcagccg cgaggtgtct gccttgcggg
     3121 gagcgcgcaa gtactggcct ctcgcggtga cgggcgtggc cctcgtggtg gccggggcct
     3181 cggtttcgtg gtggatctcc caccgtgatg cctcggggct cggcgaagcg cgccgggcct
     3241 cgcgagagga cttcaccaga gggcgccggg tggtggccat cctgccgctg gaacagctcc
     3301 agccggacgc cgagcacgcc tggttgagca acagcttcgc cgatgccatg gcctacgggc
     3361 ttgtgcggcg cgaggacatg gcagtggtgg atcgcctccg cgtggtggag gccatgcacc
     3421 gcctgggcga cacgccgggc caggcgccga aggccgtcgg cgagctgggc cgccagctca
     3481 aggccgaact gctggtgctg ggcagctacc aggtggtggg cggccagctc cgcatgggcg
     3541 tgcgcgtgct cgacgcggtg cggggggcga ccctccacca attccagctg gaccggcccg
     3601 tggccgacct gctgaagctg gaggacgaac tccagcagcg gctgccccag gagatggggc
     3661 tcggcagcga tcccggatcc ctgcgttccc aggccaagct gccgcggacc cgggagctgt
     3721 acaccaaggc ccttcaagtc atcacggacg gcaaccagga ttccgtgcgc ctggccaaca
     3781 ccctgctggc ctccgccatc gagctggagc cggactacgc gccggccagg gcggagtacg
     3841 cctggacgct ggccgaactg ggcgccacca cggccctcag ccaggggcgc tacgacgagg
     3901 cccaggccct gctccgcaag ggcaaggaag ccgcggagaa ggccatcaca ctggacccca
     3961 gcgcctccca ggcctaccgc gccctggctt ccattcacct ccggatgggc gaccttgaag
     4021 gcgccagccg ggccgcgctc caggcggtgc gcctggatcc cgccgaccac aaggcctacg
     4081 acgtgctggc cgacgtcttc gcgggcctgg agggggaaga caaccaccag gcttcccgcc
     4141 gctacttcga gaaatccctc accctctttc ccgaaggctg gcaggcccat caccgtctcg
     4201 gggtgctcct ccagaacgag ggggagctgc aggctgccct cgag
//
LOCUS       DATGWW010000704         2273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_219913, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000704 DATGWW010000000
VERSION     DATGWW010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219913"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..2215)
                     /gene="ppk1"
                     /locus_tag="VK150_10230"
     CDS             complement(83..2215)
                     /gene="ppk1"
                     /locus_tag="VK150_10230"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:NF003921.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HLP31730.1"
                     /translation="MFHPIPRPEELLNRELSWLEFNARVMEEAEDPTVPLLERVKFLS
                     IVSSNWDEFFMVRVAGIWRQIDAGITQPGPDGLTPRQLLERVSSKIHAYSARQHELFH
                     AILEPQLEANGIAILDPVALDEAQSAFLLDYFERSLLPLITPLAVDTGHPFPRLGNRA
                     LVLVVELEPDEDQLDGDLPASELSFIHVPTGLASRFLRVPSAPGTHAFVMLEDVVQHH
                     LARLFLGYTVKSCHAIRVTRDSDLPVEEDPSEDLLKTVEESLRDRRRGAVVRLQYEQG
                     LSSKVLDLLIEEMELSPEDLYPTSGLTAFSDLMQLYGQLDLPHLKDSPLPPLPVPQLD
                     QAGSLFEAIAKNDILLHHPYQSFDDSVVRFVREAAEDPKVLAIKMTLYRVTVNSPVAA
                     ALERAAERGKQVAAIVELRARFDEAANITWARRLEKTGVHVVYGLPNHKIHCKACLVV
                     RQEANGIKRYCHLGTGNYNERTSRLYSDLGLFTARPEFGEDLSNLFNMLTGYTRPPVF
                     HRILLAPQHLKKALKARIQREIGHARDGRPARMILKMNALVDPQIIQMLYEAGREGVK
                     VDLIVRGTCCLKAGVPGLSENIRAVSILDRFLEHARVYHFFNDGQPDTLLASADLMPR
                     NLDRRVELAFPLVDPVLAAQVIEMVELQLHDTLKGRVIGPDGEVVRRGLDLQDPPLRS
                     QLRIYEHTLLDSGVGAVTRKLGPLDPDI"
BASE COUNT          364 a          715 c          824 g          370 t
ORIGIN      
        1 cccccacagg cggggcgaga tcccctcgcc tctcctgtgg gggtccgggg gtgttcgcgc
       61 agcgaggaac ccccggggag catcaaatat ctggatccag gggccccagc ttccgggtga
      121 cggcccccac gccgctgtcc agcagggtgt gctcgtagat gcggagctgg ctgcgcaggg
      181 gcggatcctg gagatccagg ccccggcgga ccacctcgcc atccggcccg atgacgcggc
      241 ccttcagcgt gtcgtggagc tgcagctcca ccatctcaat cacctgcgcc gccagcacgg
      301 ggtccaccag cgggaaggcc agctccacgc ggcggtccag gttgcggggc atgaggtccg
      361 cgctggccag gagggtgtcc ggctgcccgt cgttgaagaa gtggtagacc cgggcgtgct
      421 cgaggaagcg gtcaaggatg gagaccgcgc ggatgttctc cgagagccct ggcaccccgg
      481 ctttcaggca gcaggtgccg cgcacgatga ggtctacctt cacgccctcg cggccggcct
      541 cgtagagcat ctggatgatc tgaggatcca ccagcgcgtt catcttgagg atcatccggg
      601 cgggtctccc gtcacgggca tggccgatct cccgctggat gcgggctttc agggccttct
      661 tgaggtgctg gggcgccagc agaatgcgat ggaacaccgg cggccgggtg tagcccgtga
      721 gcatgttgaa gaggttcgac aagtcctcgc cgaactcggg ccgggcggtg aacaggccca
      781 ggtcggagta aaggcggctg gtgcgctcgt tgtaattgcc cgtgcccagg tggcagtacc
      841 gcttgatgcc attcgcctcc tggcgcacca cgaggcaggc cttgcagtgg atcttgtggt
      901 tgggcaggcc gtagacgaca tgcacgcccg tcttctccag gcggcgggcc caggtgatgt
      961 tggcggcctc atcaaaacgg gcccgcagct ccacgatggc ggccacctgc ttgccgcgct
     1021 cggccgcccg ctccagggcc gcggccacgg ggctgttcac cgtcacccgg tagagggtca
     1081 tcttgatggc gaggactttg ggatcctccg ccgcctcgcg cacgaagcgc accacgctgt
     1141 cgtcgaagct ctggtagggg tggtgcagga ggatgtcgtt cttggcgatg gcttcgaaga
     1201 ggcttccggc ctggtccagc tggggcacgg gcagaggcgg cagggggctg tccttcaggt
     1261 ggggcaggtc cagctggccg tagagctgca tcaggtcgga gaaggccgtg aggcccgacg
     1321 tcgggtacag gtcctcggga ctgagctcca tctcctcgat gagcaggtcg agcacttttg
     1381 atgacaggcc ctgctcgtac tgcaagcgca ccaccgcgcc gcggcggcgg tcgcggaggc
     1441 tctcctccac ggtcttgagc agatcctcgg agggatcctc ctccaccggc aggtccgaat
     1501 cgcgggtcac gcggatggcg tggcagctct tcacggtgta gcccaggaag agacgcgcca
     1561 ggtggtgctg caccacgtcc tcaagcatca cgaaggcgtg ggttcccggg gcggagggca
     1621 cccgcaggaa gcgcgaggca agccccgtgg gcacgtggat gaacgagagc tccgaggcgg
     1681 gcaggtcgcc gtccagctgg tcctcgtcgg gttccaactc caccaccagc accagggccc
     1741 ggttgcccag gcgggggaag gggtggcccg tgtccacggc cagaggcgtg atgaggggca
     1801 ggaggctgcg ctcgaagtag tccaggagga aggccgactg ggcctcgtcc agcgccaccg
     1861 gatcgaggat ggcgatgccg ttggcctcga gctggggctc caggatcgcg tggaacagct
     1921 cgtgctgccg ggcggaatag gcgtggatct tggaggacac ccgctccagg agctggcgcg
     1981 gggtgaggcc gtccgggccg ggctgggtga tgccggcgtc gatctgacgc cagatgcccg
     2041 ccacccgcac cataaagaac tcgtcccagt tgctggagac gatgctgagg aacttcaccc
     2101 gctccaggag gggcacggtg gggtcctccg cctcctccat gacccgggcg ttgaactcca
     2161 gccagctcag ttcgcggttg agcagttcct cggggcgggg aatgggatgg aacacgggga
     2221 cctctggtcc aggatcgtac aacccgggcg taacagcttg atggtacagg ccc
//
LOCUS       DATGWW010000705         2173 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_219988, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000705 DATGWW010000000
VERSION     DATGWW010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219988"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /locus_tag="VK150_10235"
     CDS             <1..565
                     /locus_tag="VK150_10235"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31731.1"
                     /translation="GLVAAGGLAAALSTADGLLLTIANALSHDVYYKMIDPHAATTRR
                     LAISKGLLLIVALLAAYVTSLKPGDILFLVGAAFSLAASGFFPALALGIFWKRANKTG
                     AVLGMLAGLGICMYYMYITYPFFGVNAPKWWDIEPIAAGIFGIPAGIIGVVLGSLVTS
                     APSKEVQNLVDHVRYPSLEGDVKTEAA"
     gene            704..1096
                     /locus_tag="VK150_10240"
     CDS             704..1096
                     /locus_tag="VK150_10240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31732.1"
                     /translation="MLTVVVIAKALLEIAGLALLGQGLLYVMAGAKRDTNVFYKVLTT
                     ITGPIVKSVRFITPRFIVDQHIGALAFLIIVVFWFLMLTQHQDLCMDDLKNRSCARLA
                     VEYISRCQAGNDAACAVLERNGILPSAP"
     gene            complement(1099..1695)
                     /locus_tag="VK150_10245"
     CDS             complement(1099..1695)
                     /locus_tag="VK150_10245"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP31733.1"
                     /translation="MNFDAWRRLARARFHLLLRRPERAAEAWRELLALDPGSAPALNG
                     LGMWDAAQGRSVEAEAFFRRSLAVKAGQPHTWYNLGFLLDKQGRHEEAVAAFNEATAQ
                     APKLDQAWYGLGHAHAALGRHAEAAAALEKAGALVPENGFVWYSMGMAYHHLGEAERV
                     EGIARHLNRFDRSMTRQLIQDSGRGDLAHLIADYDPIK"
     gene            1903..>2173
                     /locus_tag="VK150_10250"
     CDS             1903..>2173
                     /locus_tag="VK150_10250"
                     /inference="COORDINATES: protein motif:HMM:NF027503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-coenzyme A synthetase N-terminal
                     domain-containing protein"
                     /protein_id="HLP31734.1"
                     /translation="MSESKIYPVPAEIAAKANVTEAQYQAMYKQSVDDPEGFWGEQAQ
                     KYLTWYKPWNKVLDWDFTKANIRWFDGAKLNVSYNCLDRHLATRGD"
BASE COUNT          391 a          724 c          673 g          385 t
ORIGIN      
        1 cggcctggtg gccgccggcg gtctcgccgc cgcgctctcc accgccgacg gtctgctgct
       61 gaccatcgcc aatgcgctgt cccacgacgt ctactacaag atgatcgacc cgcacgccgc
      121 caccacccgc cgcctggcca tctccaaggg cctgctgctg atcgtggcgc tgttggccgc
      181 ctacgtgacc tcgctcaagc ccggtgacat cctgttcctg gtgggcgcgg ccttctcgtt
      241 ggcggcgtcg ggcttcttcc cggccctggc gctcggcatc ttctggaagc gcgccaacaa
      301 gaccggtgcg gtgctcggca tgctggccgg cctcggcatc tgcatgtact acatgtacat
      361 cacctatccc ttcttcggcg tgaacgcgcc caagtggtgg gatatcgagc cgatcgccgc
      421 gggcatcttc ggcatccccg ccggcatcat cggcgtggtg ctgggcagcc tggtgacctc
      481 cgctcccagc aaggaagtgc agaacctggt ggaccacgtc cgctacccct cgctggaggg
      541 tgacgtcaag accgaggccg cctgatcgcg gttaaggtcg aaggaagtgc gggaggcccg
      601 ttcgcgggcc tcccgtcttt tggaaggtga gacgttaacc gttagacgtg aagcgcataa
      661 ctgcttaacg tctaacgcct aacctctaac ggaattccga ctgatgctta cggttgtcgt
      721 catagcgaag gcactgctgg agattgcggg tctggccctg ctgggccagg gcctgcttta
      781 tgtgatggcg ggggccaaac gggacaccaa cgtgttctac aaggtgctga ccaccatcac
      841 cgggccgatc gtcaagtcgg tgcgcttcat cacgccgcgt ttcatcgtgg accagcacat
      901 cggcgcgctg gccttcctga tcatcgtcgt cttctggttc ctgatgctga cccagcacca
      961 ggacctctgc atggacgacc tgaagaaccg gagctgcgct cgcctcgccg tcgaatacat
     1021 ctcccgctgt caggcaggca atgacgcggc gtgcgcggtg ttggagcgga acggcatcct
     1081 gccctccgcc ccctgaggtc acttgatggg gtcgtaatcg gcgatcaggt gcgccagatc
     1141 gccgcgcccc gagtcctgga tgagttggcg ggtcatgctc cggtcgaagc ggttcaggtg
     1201 acgggcgatc ccctccaccc gctccgcctc gccgaggtga tggtaggcca tgcccatgct
     1261 gtaccagacg aaaccgttct cgggcaccag cgccccggcc ttttccaggg ccgccgccgc
     1321 ttccgcgtgg cgcccgaggg cggcatgggc atgacccagg ccataccagg cctgatccag
     1381 cttcggggct tgcgccgtcg cctcgttgaa ggcggccacc gcctcctcgt gacgaccctg
     1441 cttgtccagc aggaagccca ggttgtacca ggtgtgcggc tgccccgcct tgacggcaag
     1501 ggaccggcgg aagaacgctt cggcctccac tgatcgcccc tgagcggcgt cccacatgcc
     1561 cagcccgttg agcgcggggg ccgagcccgg atccagcgcc aggagctccc gccaggcctc
     1621 cgcggcccgc tccgggcggc gcaggagaag gtgaaaacgg gcgcgggcga gccgacgcca
     1681 ggcatcgaaa ttcatggttc ctgctccggg aaatggaagg gccattctta ctaaaaaaag
     1741 atgggggtac aagcgcttac gctcttgaga atccccgcgt atacgccgaa aattggcccc
     1801 ttgcatgcca atcaccgcag tggacgcgac cagcagttcg aagaattaga aacgatgggc
     1861 tgagcgaccg agaacaggtt gcatcaacgg gagattaaac cgatgtctga aagcaaaatt
     1921 tatccggtgc cggccgaaat cgccgccaag gcgaacgtga ccgaggccca gtaccaggcc
     1981 atgtacaagc agtccgtgga cgacccggaa ggcttctggg gtgagcaggc gcagaagtac
     2041 ctcacctggt acaagccctg gaacaaggtc ctggactggg acttcaccaa ggccaacatc
     2101 cgctggttcg acggcgccaa gctcaacgtg agctacaact gcctcgaccg ccacctcgcc
     2161 acccgcggcg acc
//
LOCUS       DATGWW010000706         4016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_404832, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000706 DATGWW010000000
VERSION     DATGWW010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4016
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404832"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(48..1832)
                     /locus_tag="VK150_10255"
     CDS             complement(48..1832)
                     /locus_tag="VK150_10255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31735.1"
                     /translation="MTVEESAFLESLAESERIHFRHLAMVRPQLPTESQIHMLEGLAR
                     SLASPRLLALMARTPHWLAHWPILLGLAENEATPEAIRRDLEMVVSLFDQMREMDQAP
                     APEKAERSESVKALYSQLNAGLKPVAKLLAKQLAKTVTATGTTQELPPLPTEHPDWEA
                     LTALPADAPRQPSSAGLDRADRLARARQTAQPEELLGFLVDEDIELRQAALQNPLVSE
                     DLVCRALSQCQEPALFEEVYAEARWYFREPVRDSLLEAPGCPAELSRRVALSQQLVAA
                     LDQGTLGRADLRRIVSLFTQLEEGEYQFVTYWAKRQSPQLLRVVKYFYDRLQRQRSGL
                     ASALPERGEEGRWATLEERVFLATQATQEEQISQVLKDPDSQVFRLALENPALTPRLL
                     ASTLPAFDHSRAEAVAAHGAWSEDPMVAEALVHHPLLSEASALRLLAHLPGVKPAIEV
                     LRDPRVLHLEVKRRALETLRALYLAMDIPDRITALRTSGGEIMRHLPQEVLQDEETLR
                     RMVADRQLDPGILLRLARNKLTPRSVLEQIAGHPVLMAHAAIMAELLLNPKTPKDASV
                     RIWCLLSEAEQQQLLRSPPLPSTLRAMA"
     gene            complement(1846..2562)
                     /locus_tag="VK150_10260"
     CDS             complement(1846..2562)
                     /locus_tag="VK150_10260"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HLP31736.1"
                     /translation="MKIYPTLNLQNGRVVSTSGHGSGCLDAPQDLAFRLVEEGATRLA
                     LVDVDAAMGKGNNRELIAQILKRCHARDRKVCVQVAGGIRSSDQAQFFIDLGATWLVV
                     GTILHKSPMVSEQLMARFPSFLTAAIDARGGQVHRSGWVDTASLTALELAHRAKDYGF
                     RRLLFVDIPETAGADPDYATAQDLATGTGLPLIMGGSVTEPRHLETLHGHPGLKGALV
                     DALLFQQDPRLMAFLQAACA"
     gene            complement(2614..3315)
                     /locus_tag="VK150_10265"
     CDS             complement(2614..3315)
                     /locus_tag="VK150_10265"
                     /inference="COORDINATES: protein motif:HMM:NF025973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III domain-containing protein"
                     /protein_id="HLP31737.1"
                     /translation="MARPAAPPGDVEARLGYRFNRRDLLQEALTHASAGSGRDNQRLE
                     FLGDALLNFAVALLLHRERPDWQEGAMSKLRGTLVRTAALHEWALDLGLDQALRSTHP
                     RKAPVMGQKPLADALEALLAAVYLDAQDAGTDGSARVLSLVEGRFLKAIRDAHPESWI
                     QLDPKTHLQETAARLGLPAPVYTQTQLAGPGHAPRFTMAVTVGAHSAQAEGPSRKRAE
                     GEAARRLLQLLGTRT"
     gene            complement(3318..>4016)
                     /locus_tag="VK150_10270"
     CDS             complement(3318..>4016)
                     /locus_tag="VK150_10270"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP31738.1"
                     /translation="GGKGLWIGLAALLLAGIGGTSWWLLRSGASSQSPALPTDTDATT
                     STPGESGTRPRPAAGAAQQKSAGAALGDHRPDPSVPSQGGSQAAPEPVGGLKPAGQKA
                     ESRPSEARTETRAIDQPELYQQEKLEKLQVHERLNLGNVSLSEAIQLADSKPDQAIQG
                     FRQAIKADPYNANAHAWLAVVLHDQGRNAEFVQEIREARRMGLLGQMTRNPRFRSALN
                     QARFNRKLPSDLLD"
BASE COUNT          555 a         1255 c         1584 g          622 t
ORIGIN      
        1 gtcgcatggg ggctcctggg tgggctacga gtcgtgcggg ggcgcgctta ggccatggcc
       61 cggagggtgg aggggagggg ggggctgcgg aggagctgct gctgctcggc ctcggagagg
      121 aggcaccaga tccgcaccga ggcgtccttc ggcgtcttcg ggttgaggag gagctccgcc
      181 atgatcgcag cgtgggccat gagcacggga tgtccggcga tctgttccag gacggaacgg
      241 ggggtcagct tgttccgggc gaggcggagg aggatgccgg ggtccagctg ccggtcggcc
      301 accatgcgcc gcagggtctc ttcgtcctgg agcacctcct ggggtaggtg ccgcatgatc
      361 tcgcccccgg aggttcgcag ggctgtgatg cggtccggga tgtccatggc gaggtagagg
      421 gcgcggaggg tctccagggc gcggcgcttg acttccaggt gcagcaccct cgggtcgcgg
      481 agcacctcaa tggcgggctt cacgccgggc aggtgagcca gcaggcgcag ggcggaggct
      541 tccgacagca ggggatggtg caccagggcc tcggccacca tcggatcctc cgaccaggcg
      601 ccgtgggcgg ccacggcctc ggcccgggag tggtcgaagg cgggcagggt ggaggcgagc
      661 aggcgcggcg tgagggccgg attctccagg gccaggcgga agacctggct gtcggggtcc
      721 ttgagcacct ggctgatctg ttcctcctgg gtggcctggg tggcgaggaa cacccgctcc
      781 tccagggtgg cccagcgacc ttcctccccg cgctccggca gggcggaggc gaggcccgag
      841 cgctgccgct gcagccggtc atagaagtac ttcacgaccc gcaagagctg gggcgactgc
      901 cgcttcgccc agtaggtcac gaactggtac tcgccttcct caagctgggt gaagaggctc
      961 acgatgcggc gcaggtcggc ccggcccagg gtgccctggt ccagggccgc caccaactgc
     1021 tgggagaggg ccacgcggcg ggagagctcg gcggggcagc caggggcctc caggaggctg
     1081 tcccgcaccg gctcgcggaa ataccaccgg gcctcggcgt agacctcctc gaagagggcc
     1141 ggctcctggc actggctgag cgcgcggcag acgaggtcct ccgagacgag gggattctgg
     1201 agggcggcct ggcggagctc gatgtcctca tccaccagga agcccagcag ctcttcgggc
     1261 tgggccgtct gccgggcccg cgccaggcgg tcggcccggt cgaggccggc cgaggagggt
     1321 tgcctgggcg cgtcggcggg gagggcggtg agggcttccc agtcggggtg ttccgtgggg
     1381 aggggaggca gttcctgggt ggtgccggtg gccgtcacgg tcttggccag ctgcttggcc
     1441 agcagtttgg ccacgggctt caagccggca ttgagctggg agtagagcgc cttcacggat
     1501 tcggagcgtt cggccttctc cggggccggg gcctggtcca tctcccgcat ctggtcgaac
     1561 agggagacca ccatctcgag gtcacggcgg atggcttccg gggtggcttc gttctcggcc
     1621 aggcccagga ggatgggcca gtgcgccagc cagtgtgggg ttcgggccat gagggccagc
     1681 aggcgggggg aggccaggga ccgggccagt ccctcaagca tgtggatctg gctttccgtg
     1741 ggcagctggg gccgcaccat ggccaggtgg cggaaatgga tccgctcgga ctccgcgagg
     1801 ctctccagga acgcggattc ctcaactgtc acggtccctc ccggttcagg cgcaggcggc
     1861 ctggaggaag gccatgagcc tgggatcctg ctggaagagc agggcgtcca ccagcgcgcc
     1921 cttcaggccc ggatggccgt ggagggtctc caggtggcgg ggctcggtga cgctgccgcc
     1981 catgatgagg ggcagccccg tgccggtggc caggtcctgg gccgtggcgt agtccggatc
     2041 cgcgccggct gtttcgggga tatccacgaa gagcagtcgg cggaaaccgt agtccttggc
     2101 acggtgggca agctccagcg cggtgaggct ggcggtgtcc acccagccgg accggtgcac
     2161 ttggcccccg cgggcgtcga tggcggcggt gaggaaggag gggaaccggg ccatgagctg
     2221 ctcggagacc atcggcgact tgtggaggat cgtgcccacc accagccagg tggccccaag
     2281 gtcgatgaag aactgggcct ggtcggaact gcggatgccg ccggcgacct ggacgcagac
     2341 cttgcggtcc cgggcgtggc atcgcttgag gatctgagcg atgagctcac ggttgttgcc
     2401 cttgcccatg gccgcgtcca catccaccag cgccagccgg gtggcgcctt cctccacgag
     2461 tcggaaggcc agatcctgag gggcgtccag gcagccggac ccgtgccccg aggtggagac
     2521 gacacggccg ttctggaggt tcaaggtcgg gtagatcttc aagcgtacac cccgggcgag
     2581 aggccgaagg ggagtgtaac gcaaggacca ggcctatgtg cgggttccga gcagttggag
     2641 caggcgccgg gcggcttcgc cctccgcgcg cttgcgcgag gggccctcgg cctgcgccga
     2701 atgggcgccc accgtcactg ccatcgtgaa ccggggggcg tgccccggtc ccgccagctg
     2761 cgtctgggtg tagaccgggg ccggaaggcc cagcctggcc gcggtttcct ggaggtgggt
     2821 cttggggtcg agctggatcc agctctcggg gtgggcgtcg cggatggcct tgaggaaacg
     2881 tccctccacc aacgatagga ctcgggccga gccatcggtc ccggcatcct gggcatccag
     2941 gtagaccgcg gccaggaggg cctcgagggc atccgccagg ggcttctggc ccatgaccgg
     3001 cgccttgcgc gggtgggtcg accgcagggc ctggtccagc ccgaggtcga gggcccattc
     3061 atgcagggcg gcggtgcgga cgagcgtgcc gcgcagcttg ctcatggcgc cctcctgcca
     3121 gtccgggcgt tcccggtgca gcaggagggc cacggcaaag ttcagcaggg cgtcgccgag
     3181 gaattccagc cgctggttgt cgcggcctga gccggcgctg gcgtgggtga gggcttcctg
     3241 caacaggtcg cggcggttga agcggtagcc cagccgggct tccacatcac ccggaggggc
     3301 ggcggggcgg gccatggtca gtccaggagg tcggacggga gtttccggtt gaaccgggcc
     3361 tggttcaggg cggatcggaa gcggggattg cgggtcatct gccccaggag ccccatgcgg
     3421 cgcgcttcgc ggatctcctg cacgaactcc gcgttccgcc cctggtcatg gagcaccacc
     3481 gccagccagg cgtgggcatt ggcgttgtag ggatcggcct tgatggcctg gcggaagccc
     3541 tggatggcct ggtcgggctt gctgtcggcc agctggatgg cctcgctgag ggagacgttg
     3601 cccaggttga gccgctcgtg gacctggagc ttctccagct tttcctgctg gtagagctcg
     3661 ggctggtcga tggcccgggt ttcggtccgg gcctcagagg gacgcgattc agccttctgc
     3721 cccgcaggct tcaacccacc cacgggttcc ggggcggcct gggatccgcc ctgggagggc
     3781 acggacgggt cgggcctatg gtcgcccaga gcggcgccgg ccgacttctg ctgggcggcg
     3841 cccgcggccg ggcgtggccg tgtgccggac tcgcccgggg tggaggtcgt ggcgtcggta
     3901 tcggtcggga gggcggggga ctggctcgag gctccgctcc gcagcagcca ccaggaagtg
     3961 ccgccaatgc cggccaggag cagggccgcg agcccgatcc agagtccctt gccgcc
//
LOCUS       DATGWW010000707         1955 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_220120, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000707 DATGWW010000000
VERSION     DATGWW010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1955
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220120"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..373)
                     /gene="atpH"
                     /locus_tag="VK150_10275"
     CDS             complement(<1..373)
                     /gene="atpH"
                     /locus_tag="VK150_10275"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit delta"
                     /protein_id="HLP31739.1"
                     /translation="MSSRLTARRYAKALLQIGDKQGNVAQLQQELNKVTDAVAANADL
                     SRLVASPLVLPTRKAQVFEAILATAQVSETLRHFFRVVAEAGRLNLLADIRRTFADQV
                     DERAGIVEAKVTSAQPLSDAQA"
     gene            complement(370..1137)
                     /locus_tag="VK150_10280"
     CDS             complement(370..1137)
                     /locus_tag="VK150_10280"
                     /inference="COORDINATES: protein motif:HMM:NF012645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit B"
                     /protein_id="HLP31740.1"
                     /translation="MTNLTRLTLAALLTLSPLALTAQSHEAPAAQKHEAQPAGHEAQP
                     AGHEAQPAGHEAQPAGHEAPAAHGDAKAAEGHGEAHGGAHHGPAMTLFGEAYGNGGAF
                     LVQLLNFAIYGAALFFLLKGALSAMFKSRKEELETLLAQAEKDKAEGEAQMKELEAKM
                     AGLEGELAGILSKAEADAELEKQRVLEAAKAEAAVILAQAQAEIGFQKRQAEQELRAL
                     VAELAVEGAAKRLEAKLQGPEAAKAVDRAIQQIGGAQ"
     gene            complement(1140..1562)
                     /locus_tag="VK150_10285"
     CDS             complement(1140..1562)
                     /locus_tag="VK150_10285"
                     /inference="COORDINATES: protein motif:HMM:NF012645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit B"
                     /protein_id="HLP31741.1"
                     /translation="MRPDLPAILFVIVLLIVLYLYLRVVFFKPITKVMDDRDRDLHAG
                     GDAKAQAAAQLDARQKDYQERLKALRAQAFERRKTLADAAGKEKQRLLDEARTKAQAE
                     RTTAVEALKAQQATAKQSLLAQVDALAESMAQTLLKQA"
     gene            1845..1920
                     /locus_tag="VK150_10290"
     tRNA            1845..1920
                     /locus_tag="VK150_10290"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1878..1880,aa:Val,seq:tac)
BASE COUNT          264 a          651 c          697 g          343 t
ORIGIN      
        1 tggcctgggc gtccgagagg ggctgggcac tggtcacctt ggcctccacg atgccggcgc
       61 gctcatcgac ttgatccgcg aaggtgcggc ggatgtcggc cagcaggttc aagcggcccg
      121 cctcggccac gacgcggaag aagtgccgca gcgtttcgct cacctgggcg gtggcgagga
      181 tggcctcgaa gacctgggcc ttgcgggtag gcagcaccag gggcgaggcc accaggcgcg
      241 agaggtcggc gttcgcggcc acggcgtcgg tcaccttgtt cagctcctgc tggagctggg
      301 ccacgttgcc ctgcttgtcg ccgatctgga ggagggcctt ggcgtagcgc cgggcggtca
      361 ggcggctgct cactgggcgc ctccgatctg ctgaatggca cggtccacgg ccttggcggc
      421 ctcgggaccc tgcagtttgg cctccaggcg cttggccgcg ccttcaaccg ccagttcagc
      481 gaccagggcg cgcagctcct gctcggcctg ccgcttctgg aagccgatct cggcctgagc
      541 ctgggcgagg atcaccgcgg cctcggcctt ggcggcctcc agcacgcgct gcttctccag
      601 ctcggcgtcg gcctcggcct tggagaggat gcccgccagc tcgccttcga gtccggccat
      661 cttggcctcg agctccttca tctgggcctc gccctcggcc ttgtccttct ccgcctgggc
      721 gagcagcgtt tccagctcct ccttgcggga cttgaacatg gcggacagcg cgcccttcag
      781 caggaagaac agggccgcgc cgtagatggc gaagttgagc agctggacga ggaaggcccc
      841 gccgttgccg taggcctcgc cgaagagggt catggccggg ccgtggtggg cgccgccatg
      901 ggcttcgccg tggccttccg ccgccttggc gtcaccgtgg gcggccgggg cctcatgccc
      961 tgcgggctgg gcttcatgcc cggcaggctg ggcttcatgc cctgcgggct gggcctcatg
     1021 cccggcaggc tgggcttcgt gcttctgggc ggcgggggcc tcatgggact gggccgtcag
     1081 cgccaagggg ctgagggtca gcagggcggc cagggtgagt cgggtcaggt tcgtcatgct
     1141 caggcctgct tcagaagggt ctgggccatg gattcggcca gcgcgtccac ctgggccagg
     1201 aggctctgct tggccgtggc ctgctgggcc ttcagggcct cgacggccgt ggtccgctcg
     1261 gcctgggcct tggtccgggc ctcgtcgagg aggcgctgct tctccttgcc ggccgcgtcg
     1321 gccagcgtct tgcgccgctc gaaggcctgg gcgcggaggg ccttgagccg ctcctggtag
     1381 tccttctggc gggcgtccag ctgcgcggcg gcctgggcct tggcgtcgcc gccggcgtgc
     1441 aggtcgcggt cgcggtcgtc catgaccttg gtgatgggct tgaagaacac cacccgcagg
     1501 tagaggtaga gcacgatgag cagcacgatc acgaacagga tggcgggcag gtccggccgc
     1561 atgggatccg gcatctgggc taagatgcgc gcgacggggc cgtccccttc cggtgatcgg
     1621 agcgtcagat tcgccagttc cagcagcgcc acaggccacc ctccagaaac gtcccaaggc
     1681 cacggccgat ggtcgaccag ggtcacaccg acaccagcgt tggtccgcgg gaacccctgg
     1741 cacggaagtc ttaaaacctt accagaacag tcttgttccc tcaacgcgga gctttggcct
     1801 tgacccctcc cgcaccctgt gtgaacatca gggttcggcg attcgggcga ttagctcagt
     1861 cggtagagca gctgccttac acgcagcatg tcggcggttc gagcccgtca tcgcccacca
     1921 gtctcaaacc tggtgaaacg caggaaaagc aaggg
//
LOCUS       DATGWW010000708         3028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_166085, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000708 DATGWW010000000
VERSION     DATGWW010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3028
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166085"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..907
                     /locus_tag="VK150_10295"
     CDS             <1..907
                     /locus_tag="VK150_10295"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HLP31742.1"
                     /translation="QPPLWLLPVALVGTALLLAPRGWPGRWLGLLWCLPLFLLPPARP
                     AEGEVWLTLLDVGQGLAAAVETRDHLLLFDTGPTLGPELDAVEAAVEPFLRSRGWRRV
                     DMLLVSHGDDDHAGGARTLAAVLPVEHRLAAVPERLADVGGAGPCRRGQEWVWERVRF
                     RIVHPDREEGDNDGSCVLRVEAPGGALLLTGDIEARAEKALVASEEALRSRVLVVPHH
                     GSRTSSSREFLDAVHPELALFPVGYRNRFHFPNSAVVARYDALHIRRLETAREGAITV
                     RLGADGSLATESRRNGGRRYWQPLP"
     gene            975..1604
                     /locus_tag="VK150_10300"
     CDS             975..1604
                     /locus_tag="VK150_10300"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HLP31743.1"
                     /translation="MLEIVIAGGWVMLPLVLCSIAATGIVVERSLALRVEKVAPRTLL
                     PQIWQWHKAGQLDGARLRAIHATSPLGKVLAAGLKNSGHTREVMKEAIEDAGRQVLAE
                     LERFLNMLGTIGSLSPLLGLLGTVLGMIQMFSGVAGAGALGSPAAVAGGIAQALITTA
                     AGLIIAIPSVMAYRYLKGRVDAMVLVMEADALRLVEMIHGEREAEEAAA"
     gene            1601..2023
                     /locus_tag="VK150_10305"
     CDS             1601..2023
                     /locus_tag="VK150_10305"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HLP31744.1"
                     /translation="MKFQGRRSEEPELNLTSLIDVLLMLIIFFMVATTFQRETELNVQ
                     LPEASGKPLENQARTVEVSIDAEGRYYVNRQEVISTQLDSLKNAMAQAAGSDAAPQVI
                     LSADRKTPHESVVRAMDAAGQLGFVHITIATTRPREGG"
     gene            2027..>3028
                     /locus_tag="VK150_10310"
     CDS             2027..>3028
                     /locus_tag="VK150_10310"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HLP31745.1"
                     /translation="MAEEINGARVYRRLLKYVLPYWRAFAIAAVGLVIEAGTETAFAA
                     LIKPFIDGSFIQRDPTIIKLAPLGLILLFLVRGVASYLASFWMNFVARQVIKNLRTQI
                     FSKMLRLPVVYFDTTPSSVMLSRLIYNVEQVAQASSQAISSLLRDSLTIVGLLAWMFY
                     IDWLLASILLIGTPAIAWITRRISQRFRRYSTRIQDSMAEVTHIAGEVVEGQRVVKVF
                     SGQEYEEKRFETANERNRHLNMRMIATSAANVPVVQLVAASGSAIVIYVALGMIEKLT
                     IGTFMSFVAAMMMLLRPIKGITTVNAAMQRGIAAASTIFKFLDEPEEKDTGHLRLERV
                     "
BASE COUNT          463 a         1030 c         1025 g          510 t
ORIGIN      
        1 ccagcccccg ctctggctcc tgccggtggc ccttgtcggc accgccctgc tgctcgcccc
       61 gcgcgggtgg ccgggtcgct ggcttgggct gctctggtgc ctgccgctct tcctgctccc
      121 gcccgcgcgg cccgcggagg gggaggtatg gctgaccctg ctcgacgtag gacaggggct
      181 ggccgcggcg gtcgagacac gggaccacct gctgctcttc gacacggggc ccacgctcgg
      241 accggaactc gatgcggtcg aggcggcggt ggaacctttc ctgcgcagcc ggggctggcg
      301 tcgtgtggat atgctgctcg tcagccatgg ggacgacgac cacgccgggg gcgcccgcac
      361 cttggcggcc gtgctacccg tggagcaccg gctggcggcg gtcccggagc ggctggcgga
      421 cgtcggcggc gccggcccct gccgccgcgg ccaggagtgg gtgtgggagc gggtccgctt
      481 ccgcatcgtc catccggacc gggaagaggg ggacaacgac ggctcgtgcg tcctgcgggt
      541 ggaggccccg ggcggggcgc tgctgctcac gggggatatc gaggcgcggg cggaaaaggc
      601 cttggtcgcc tcggaggagg cgctgcggtc ccgtgtgctg gtggtgccgc accacgggag
      661 ccgcacctct tccagcaggg aattccttga tgcagtgcac cccgaactgg cgctcttccc
      721 cgtgggctac cggaaccggt ttcattttcc gaacagcgcg gtggtggcgc gctacgacgc
      781 cctccacatc cgccgcctgg aaacggcccg ggagggggcc attacagtgc gcctcggggc
      841 ggatgggagc ctggccacgg aaagccgcag aaacggaggg cggcgctact ggcagccatt
      901 gccgtagtcg ctaggcgggg gcggtgctct ttggtaaagt ggcggcgcct tttttgtcgc
      961 cccgggagtc cctcgtgctc gagattgtca tcgccggcgg ctgggtcatg ctgccgctcg
     1021 tcctctgttc catcgccgcc accggcatcg tggtggaacg gtccctggcc ctccgtgtgg
     1081 agaaggtcgc cccccgtacc ctcctgcccc agatctggca gtggcacaag gccggtcagc
     1141 tcgacggcgc ccggctgcgg gccatccacg ccacctcgcc cctgggcaag gtgctggccg
     1201 ccggtctcaa gaacagcggc catacccgtg aggtgatgaa agaagccatc gaagacgccg
     1261 gccgccaggt gctggccgag ctggaacgct tcctcaacat gcttggcacc atcggttccc
     1321 tctcgcccct gctgggcctg ctcggcaccg tgctcggcat gatccagatg ttctcggggg
     1381 tggccggcgc aggcgcgctc ggcagcccgg ccgccgtcgc gggcggtatc gcccaggcgc
     1441 tcatcaccac ggccgcgggc ctcatcatcg ccattccctc cgtcatggcc taccgctacc
     1501 tgaaggggcg ggtggacgcc atggtgctgg tgatggaagc ggacgcgctg cgcctggtgg
     1561 agatgatcca cggcgagcgt gaggcggaag aggcggccgc gtgaaattcc agggccgccg
     1621 cagcgaagaa ccggagctga acctcacgtc gctcatcgac gtgctgctga tgctcatcat
     1681 cttcttcatg gtcgccacca ccttccagcg cgagacggaa ctcaacgtgc aattgccgga
     1741 ggcgagcggc aagccgctgg agaaccaggc acgcacggtg gaggtctcca tcgacgccga
     1801 agggcgctac tacgtcaatc gccaggaagt gatcagcacc cagttggact ccctgaagaa
     1861 cgccatggcc caggccgcgg gcagcgacgc cgcgccgcag gtgatcctca gcgccgaccg
     1921 caagacgccc cacgaatcgg tggtacgcgc catggacgcg gccggccagc tcggcttcgt
     1981 gcacattacc atcgcgacca cgcggccgcg cgagggcggc tgatccatgg ccgaggagat
     2041 caacggggcg cgcgtctatc ggcgcctgct gaagtatgtc ctgccctatt ggcgtgcctt
     2101 cgccatcgcg gcggtcggcc tcgtcattga ggcgggcacc gagaccgcct tcgccgcgct
     2161 catcaagccc ttcatcgacg gcagcttcat ccagcgcgat ccgaccatca tcaagctggc
     2221 tcccctcggg ctgatcctgc tgttcctggt ccgaggtgtc gcctcctacc tggcgtcgtt
     2281 ctggatgaat ttcgtggcgc gccaggtgat caagaacctg cgcacccaga tattctccaa
     2341 gatgctgcgc ctgccggtgg tctatttcga caccacgcct tccagcgtga tgctgtctcg
     2401 gcttatctac aacgtcgaac aggtggcgca ggccagttcc caggccatct ccagcctgct
     2461 gcgcgactcg ctcaccatcg tgggcctgct ggcgtggatg ttctacatcg actggctgct
     2521 ggcctccatc ctgctcatcg gcacgccggc catcgcctgg atcacgcgcc gcatcagcca
     2581 gcgtttccgc cgctacagca cccgtatcca ggactccatg gcggaggtga cccacatcgc
     2641 cggcgaagtg gtggaggggc agcgagtggt gaaggtcttc tcgggccagg aatacgagga
     2701 gaagcgcttc gagaccgcca acgagcgcaa ccgccacctc aacatgcgca tgatcgccac
     2761 cagcgccgcc aacgtaccgg tggtgcaact ggtcgcggcc agcggctcgg cgatcgtgat
     2821 ctatgtggcg ctgggcatga tcgagaagct gaccatcggc accttcatgt cgttcgtcgc
     2881 cgccatgatg atgctgctgc gtccgatcaa gggcatcacc accgtgaacg ccgccatgca
     2941 gcgcgggatc gccgcggcca gcacaatttt caagttcctg gacgagccgg aggagaagga
     3001 tacggggcat ctccgtctgg agcgggtg
//
LOCUS       DATGWW010000709         2135 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_405251, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000709 DATGWW010000000
VERSION     DATGWW010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405251"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..979
                     /locus_tag="VK150_10315"
     CDS             <1..979
                     /locus_tag="VK150_10315"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="radical SAM/SPASM domain-containing protein"
                     /protein_id="HLP31746.1"
                     /translation="KLNEDYVEGTLTCLKPSTIEGRASAEFPLVLNIEPTNLCNLRCV
                     YCPRERAAKGRGFMDWDLFTRVVDEAAECGPLVMLNLHKDGEPFMHPRFLDMARYARD
                     KDAAKTIHVNTNAMCWDDATIERMLDSGLDDITVSLDAARPETFKRLKGADALERVER
                     SVRRAYELRERRNLKGPFIRVKIMEFGDVGTDEVREFHEKWRGVADQVQVTGAHSWSG
                     AIEGLEVTDETSRVRYPCMIMWYAMVLNWDGTSTVCSVDWNTEILLGDANRQTLSGIW
                     KSPQARAARRSQMEEGWGRYPVCESCVVWVSVGDMRGWIKSRPEFWEDK"
     gene            976..>2135
                     /locus_tag="VK150_10320"
     CDS             976..>2135
                     /locus_tag="VK150_10320"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLP31747.1"
                     /translation="MSERLKKSYALWEKARGLILCGANTLSKSPRHIAPGACPVYVDR
                     SEGAYFWDVDGNRYLDFPLGLGAVVLGHAHPRVEDAVAAQLRRGSLHSLNSPLEVELA
                     ERLCGIIPCCEKLRLVKSGSEAMSAAVRLAKAFTGRDVVAVCGYHGWHDWTVARMGRD
                     AGVPGCLKDLVATFSYNDPASLAAVFAAYPGRVAAVVMEPVGFDAPVDAFLENVAEMV
                     RREGALLVFDEVLTGFRLSLGGAQEYFGVVPDLAGFGKALANGHGLSLVCGRREIMDA
                     VEERVFISSTFGGETGPIAAALATLDELAEPGAMARLRAAGVSLREGLGQVLATSGLD
                     AVCKGLPHKSSVSFSEQSGVSARTLDTLFRARCLERGVFLGYGHFMSLAHGQ"
BASE COUNT          355 a          635 c          759 g          386 t
ORIGIN      
        1 gaagctcaac gaggactacg tggagggcac gctgacctgc ctgaagccct ccaccatcga
       61 aggccgggcc tcggcggagt ttccgctcgt gctcaacatt gagcccacca acctgtgcaa
      121 cctgcgctgc gtctactgcc cgcgcgagag ggcggcgaaa gggcgcgggt tcatggactg
      181 ggatctcttc acgcgagtgg tggacgaggc ggccgagtgc gggccactgg tcatgctgaa
      241 cctgcacaag gacggcgagc ctttcatgca cccgcgcttc ctggacatgg cgcgatacgc
      301 cagggacaaa gacgcggcca agaccattca cgtgaatacc aacgccatgt gctgggacga
      361 cgccaccatc gagcgcatgc tcgacagcgg attggacgac atcacagtca gcctcgatgc
      421 ggcccggcca gaaaccttca agcgcctcaa gggcgcggat gccctggagc gcgtggagcg
      481 tagcgtgcgc agggcttatg agttgcgcga acgccggaat ctgaaaggcc cgtttatccg
      541 ggtcaaaatc atggaattcg gcgacgtggg cacggatgaa gtccgcgagt tccatgagaa
      601 gtggcgcggg gtggccgacc aggtgcaggt cacgggcgcg cattcatgga gcggggccat
      661 cgagggcctg gaggtcacgg acgagacttc ccgtgtgcgc tatccctgca tgatcatgtg
      721 gtacgccatg gtgctcaact gggacggcac gtccacggtc tgctccgtgg actggaacac
      781 ggaaattctg ctgggagacg ccaatcggca gactctgtcc gggatttgga aatcccccca
      841 ggccagagcc gcccgccgct cccaaatgga ggagggctgg gggcgctacc cggtgtgcga
      901 atcctgcgtg gtgtgggtct ccgtgggcga catgcgtggc tggatcaaga gccgccccga
      961 attctgggag gataagtgag cgagcgtctg aagaaatcgt acgccctgtg ggagaaggcc
     1021 cggggcctca tcctgtgcgg ggcgaacacc ctgtccaagt ccccccggca tatcgctccc
     1081 ggagcgtgcc cggtgtatgt ggaccgctcc gagggagcgt acttctggga cgtggacggc
     1141 aaccgctatc tggatttccc cctgggcctg ggtgcggtgg tgctgggtca cgcccatcct
     1201 cgtgtggagg acgccgtggc cgcgcagctt cggcgaggtt ccttgcactc cctgaacagc
     1261 cccctggaag tggagctggc cgagcgcctg tgcggcatca tcccctgctg cgagaagctg
     1321 cggctggtca agagcggttc cgaggccatg agcgccgcag tgaggctggc caaggccttc
     1381 accgggcgcg acgtggtggc cgtgtgcggc taccacggct ggcatgattg gaccgtggcc
     1441 cgcatgggac gcgacgccgg tgtgccgggc tgcctcaaag atctggtggc caccttctcc
     1501 tacaacgatc ccgcctcgct ggcggccgtg ttcgcggcct atcctggccg ggtggcagcg
     1561 gtggtgatgg agccggtagg tttcgacgct ccggtggacg cgttcctgga gaacgtggcc
     1621 gaaatggtcc ggcgcgaggg cgcgctcctg gtgttcgacg aggtgctcac cggatttcgc
     1681 ttgtcgctgg gtggggcaca ggaatatttc ggcgttgtcc cggatcttgc cggattcggc
     1741 aaggccctgg ccaatgggca cgggctgtcg ctggtgtgtg gacggcgcga gatcatggac
     1801 gcagtggagg agagggtatt catctcctcc actttcggtg gcgagaccgg tcctatcgcg
     1861 gctgccctgg caacgcttga cgaactggcg gagcctggag ccatggcccg gctgcgggcc
     1921 gctggtgtgt cgctccgcga ggggctgggc caggtgctgg ccacttccgg attggacgcg
     1981 gtctgcaagg ggctccccca caaaagctcc gtgagctttt cggaacagtc cggggtgtct
     2041 gctcgaaccc tcgatacgct cttcagggcg cgctgcctgg agcggggggt gtttctggga
     2101 tacgggcatt tcatgagcct ggctcatggg cagga
//
LOCUS       DATGWW010000710         1731 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_405522, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000710 DATGWW010000000
VERSION     DATGWW010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405522"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1731
                     /gene="purL"
                     /locus_tag="VK150_10325"
     CDS             <1..>1731
                     /gene="purL"
                     /locus_tag="VK150_10325"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HLP31748.1"
                     /translation="HCSYKSSKKWLKTLPTTGPRVVIGPGENAGVVDIGDGWAVAFKM
                     ESHNHPSFIEPYQGAATGVGGILRDVFTMGARPLANLNSLRFGELDAPRMKGLVKGVA
                     AGISGYGNCMGIPMLGGDCAFDASYNGNILVNAFTLGVLKSDRVFKGFASGVGNKVMY
                     IGSKTGRDGIHGASMASAEFGEGSEEKRPTVQVGDPFTEKLLLEACLEIFQTNWVIGI
                     QDMGAAGLTSSSFEMASRAGTGLEIRLDQVPQREEGMTPFELMLSESQERMLLVARPG
                     CEPKIIHVLHKWGLDACVVGEVTDSGRFIGSWHGAPVINLPIQPLVDAAPKYDRPRQR
                     PAYLDAVNAAPLPADLKPAEVERTLRQILQAPTVASKRWIFEQYDGTVRSNTLLGMGH
                     GDAGIIRVKDDAGQDTGKAVAMSSDCNSRFCYLDPFWGAAHAVAEACRNLACVGAEPI
                     GLTDCLNYGNPEKPENMWTFEQGCLGIRQACLALDVPIVSGNVSLYNDTEGQSIFPTP
                     MIAAVGLVEDCAGPVAVDAPDATALSKVGNRICGAGFRAAHDGIFLLGETRDELGGSE
                     YLKLRTGKVQG"
BASE COUNT          299 a          595 c          590 g          247 t
ORIGIN      
        1 cactgctcct acaagtcgtc gaagaagtgg ctgaagacgc ttccgacgac cggcccccgc
       61 gtcgtgatcg gcccgggcga gaacgccggc gtggtcgaca tcggcgacgg ctgggccgtg
      121 gccttcaaga tggagagcca caaccatccc agcttcatcg agccctacca gggcgccgcg
      181 acaggcgtgg gcggcatcct gcgcgacgtc ttcaccatgg gcgcccggcc cctggcgaac
      241 ctcaattccc tgcgcttcgg cgaactggac gcgccccgca tgaagggtct ggtgaagggc
      301 gtggccgcgg ggatatccgg ctacggcaac tgcatgggca tccccatgct gggcggcgat
      361 tgcgcctttg acgccagcta caacggcaac atcctggtga acgccttcac cctgggcgtg
      421 ctgaagtcgg accgcgtgtt caagggattt gcctccggcg tgggcaacaa ggtgatgtac
      481 atcggctcga agacgggccg cgacggcatc cacggcgcca gcatggcctc ggcggaattc
      541 ggcgagggca gcgaggagaa gcgccccacg gtgcaggtgg gcgatccctt cacggaaaag
      601 ctgcttctcg aggcctgcct ggagatcttc cagaccaact gggtcatcgg cattcaggac
      661 atgggcgccg cgggcctcac ctccagcagc ttcgaaatgg ccagccgagc cggcacgggc
      721 ctggagatcc gcctggacca ggtgccccag cgggaggagg gcatgacgcc cttcgagctg
      781 atgctcagcg aaagccagga gcgcatgctg ctggtggccc gcccgggttg cgaacccaag
      841 atcattcacg tgctgcacaa gtggggattg gatgcctgcg tggtgggcga ggtcaccgac
      901 agcggccgct tcatcggcag ctggcacggc gccccggtca tcaacctgcc catccagccc
      961 ctggtggacg cggcccccaa gtacgaccgg ccccgccagc gtcccgccta cctggatgcc
     1021 gtgaacgccg cgccgctgcc ggcggacctc aagcccgccg aggtggagcg caccctgcgc
     1081 cagatcctcc aggcgcccac ggtggcgagc aagcggtgga tcttcgagca gtacgacggc
     1141 actgtgcgca gcaacacgct gctgggcatg ggccacggcg acgcgggcat catccgggtg
     1201 aaggatgacg ccggccagga cacggggaag gccgtggcca tgtcgagcga ctgcaacagc
     1261 cgcttctgct acctcgatcc cttctggggc gcggcccacg cggtggcgga ggcctgccgc
     1321 aacctggcct gcgtgggcgc cgagcccatc ggcctcacgg actgcctcaa ctacggcaac
     1381 cccgagaaac ccgagaacat gtggaccttc gagcagggct gcctgggcat ccgccaggcc
     1441 tgcctggccc tcgatgtgcc catcgtcagc ggcaacgtga gcctctacaa cgacaccgaa
     1501 ggccagagca tcttccccac gcccatgatc gccgccgtag gcctggtgga ggactgcgcg
     1561 ggtccggtgg cggtggacgc gccggacgcc acggccctgt cgaaggtggg caaccgcatc
     1621 tgcggcgccg gcttccgcgc cgcccacgac ggcatcttcc tgctgggcga gacccgcgac
     1681 gagctgggcg gcagcgagta cttgaagctc cgcacgggca aggtgcaggg c
//
LOCUS       DATGWW010000711         1548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_221198, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000711 DATGWW010000000
VERSION     DATGWW010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221198"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(90..>1548)
                     /locus_tag="VK150_10330"
     CDS             complement(90..>1548)
                     /locus_tag="VK150_10330"
                     /inference="COORDINATES: protein motif:HMM:NF033559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HLP31749.1"
                     /translation="AVVGTIRELGLDRLFATRKSREKDLAVALVAGRVLHPGSKLSLS
                     RFLDPGSRASTLGQVLGVEGADENELYAAMDWLVERQGKIEDALAKRHLTNGCLVLYD
                     VSSSYFEGKTCPLAKFGYSRDHRGDRMQITYGLLCNADGCPVAVEVFDGATNDHQTVA
                     SQIDKLKARFGLEHVVLVGDRGMVSETTIRKELEPIGLDWITALKSATVRKLAEARVI
                     TPSLFDTAQVAEVQHPDFPGERLIACFNPFTQERNRRRREDLLQVTERLLEKVQKATQ
                     RPRKPLAGKGEIGLAAGKALARTGMGKYFRLTIEEGGLSWERRRSLIRDEDALDGIYV
                     IRTKVPAQQMNAEQTRKAYQSLSKVERAFRSFKDVDLQVRPIHHRLEERVRAHVFLCM
                     LAYHVEWHLRRAWQPLLLAEDPTVRHAGKKATGRTEDGLVATRYRDLLRELAGYARNF
                     MAFEHAPAARVPFHPTPSPLQQRAFDLLGVKPAVL"
BASE COUNT          229 a          518 c          531 g          270 t
ORIGIN      
        1 cctctcctga ctgaagttcc atatcacctg agcgagaaaa cccttggttt gtaaggcttt
       61 taggtcaaaa ccaagtgcgc ggagtctgac tacaggacgg ccggcttcac ccccagaagg
      121 tcgaaggccc gctgctgcag ggggctgggg gtcgggtgga agggcacccg cgccgccggg
      181 gcatgctcga aggccatgaa gttgcgggca tagccggcca gttcccgcag cagatcccgg
      241 tagcgggtgg ccaccaggcc atcctcggtc ctgcccgtgg ccttcttgcc ggcgtgtcgc
      301 accgtcgggt cctccgccag cagcaggggc tgccaggccc ggcgcaggtg ccattccacg
      361 tggtaggcca gcatgcagag gaagacgtgg gcccgcaccc gctcttccag gcggtggtgg
      421 atggggcgaa cctggaggtc cacgtccttg aagctgcgga aggcccgctc gaccttggac
      481 agcgactggt aggccttccg ggtctgctcg gcgttcatct gctgggcggg gaccttggtc
      541 cggatgacat agatgccatc gagggcgtcc tcgtcccgga tcagggaccg gcgccgctcc
      601 cagctcagcc cgccctcctc gatggtgagg cggaagtact tgcccatgcc ggtgcgggcc
      661 agggccttgc cggcggccaa gccgatctcg cccttgccgg ccaggggctt gcgggggcgc
      721 tgggtggcct tctggacctt ttccagcagc cgttccgtga cctgcagcag gtcctcccgc
      781 cgccggcggt tgcgctcctg ggtgaaggga ttgaagcacg cgatcaggcg ctctcccggg
      841 aagtccggat gttgcacttc ggccacctgg gcggtgtcga acaggctggg agtgatcacc
      901 cgggcctcgg ccagcttgcg gacggtggct gacttcaggg cggtgatcca gtccaggccg
      961 atgggctcca attccttgcg gatggtggtt tcggaaacca tcccccggtc gcccaccagc
     1021 accacgtgct ccaggccaaa ccgggccttg agcttgtcga tctggctggc cacggtctgg
     1081 tggtcgttgg tggcgccgtc gaacacctcc accgccaccg ggcagccgtc ggcattgcag
     1141 agcaggccgt aggtgatctg catgcggtcg ccccggtggt cgcggctgta gccgaacttg
     1201 gccagggggc aggtcttccc ttcgaaatag ctggaactca cgtcgtagag gaccaggcag
     1261 ccgttggtca ggtggcgctt ggccagggcg tcctcgatct tgccctggcg ctccaccagc
     1321 cagtccatgg cggcgtacag ctcgttctcg tcggcgcctt ccacccccag cacctgcccc
     1381 agggtggagg cccggctgcc gggatccagg aagcgggaca gggaaagctt gctgccggga
     1441 tgcagcaccc gcccagccac cagggccacg gccaggtcct tctcccggct cttgcgggtc
     1501 gcgaacagcc ggtccaggcc cagttcccgg atggtgccca ccaccgcc
//
LOCUS       DATGWW010000712         3291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_406323, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000712 DATGWW010000000
VERSION     DATGWW010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3291
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406323"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>3291)
                     /locus_tag="VK150_10335"
     CDS             complement(<1..>3291)
                     /locus_tag="VK150_10335"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HLP31750.1"
                     /translation="PGMADPSSAPHYFSVGNYANSPLRLSAANVVITGDGTGAMGHAQ
                     VDLTTGAILQLHVMDGGTGYTTAPTVEITSPVPTASGATATATIDPLTGAVTALTVVT
                     PGSGYVTPGIRKFVDTLPGLGAAGANNLGQYIPVAVPDTTTYPGTDSYEIAVVQYREQ
                     MHSDLPATLLRGYVQLATATTPGATPLVNPDGTPILLPNGTQAIGVDRPHYLGPLISA
                     TKDRPVRITFRNLLPTGVAGNLFLPVDTTVMGAGMGPDMAGMAEPDPQHPMAGMIPKP
                     MGVYSENRATLHLHGGISPWISDGTPHQWVTPAGETTSYPKGVSVVNVPDMPDPGPGA
                     MTFFYTNQQSARLMFYHDHAWGITRLNVYAGEAAAYTITDPAEQKLIANGVIPADQIP
                     LVIQDKTFVPSVEQLAVQDPLWNMDLWGGYGNLWVPHVYVPAQNPGDVSGVNQYGRWA
                     YGPWFWPPTNDVLYPPIANPYYDPMADPDLGWVEPPLMPGTPFISMGMEAFNDTPLVN
                     GTAYPTVNLEAKPYRLRILNAANDRFFNLHFYEADATGTEVALNAAEVAAALTDPAGV
                     FPTPDLALSPAGPSWIQIGTEGGFLPAPVVIPPQPITWVTDPTVFNAGNVDKHSLLLG
                     PAERADVIVDLSAYAGKTLILYNDAPAAFPARDPRYDYYTGNADLTGTGGAPSTLPGY
                     GPNTRTVMQIKVGGTPGAAFDLARLNAAFAHQPDGSGVFESSQHPIIVGQGAYNSAYG
                     TAFKNAGPRAGVVQIYDEYLDFDTLSGTALRMPLQRKAIQDEMGEAFEKEYGRMSGNL
                     GVETPNAQAGTQQNLILYPYVNPASEVFSGITLPPGVDVTPISSATDGTQIWKITHNG
                     VDTHPIHFHLFDVQLINRVGWDGIVRKADLNEIGWKDTIRISPLEDTIVAMRPIIPKI
                     PFGVTDSLRPLNPMMPLGSADGFNSTDMLGNPITPAITNQMTNFGWEYVWHCHILSHE
                     EMDMMRPMAVGVARSLPVPPTVTLTTNANGSRSLSWTDGTPVDYSSTATWGNLANEVG
                     FRIERANIASNGRVGTYAVIGTTLANQTQFTDTTATTTGRYSYRVAAWNAAGASTSAP
                     VGGAAVAPP"
BASE COUNT          463 a          939 c         1300 g          589 t
ORIGIN      
        1 ggcggagcca cggccgcgcc gccgaccgga gcggacgtgg aggcaccggc ggcgttccag
       61 gcggcgacac ggtagctgta gcggcccgtc gtggtcgcgg tcgtgtcggt gaactgggtc
      121 tggttggcca gggtggtgcc gatcaccgcg taggtgccga cccgtccgtt gctggcgatg
      181 ttcgcgcgtt cgatgcggaa gcccacttca ttggccaggt tgccccaggt ggcggtgctg
      241 ctgtagtcca ccggggtgcc gtcggtccag gaaagcgacc gggagccgtt ggcgttggtc
      301 gtgagggtta cggtgggagg aaccggcagt gagcgcgcca ccccgaccgc catgggccgc
      361 atcatgtcca tttcttcgtg gctgaggatg tggcagtgcc acacgtattc ccagccgaag
      421 ttggtcatct ggttggtgat cgccggtgtg atggggttac ccagcatatc ggtgctgttg
      481 aagccgtccg cggaacccag gggcatcatc gggttcaggg gtcggaggct gtccgtcacg
      541 ccgaagggga tcttcgggat gatgggccgc atggccacga tggtgtcttc cagggggctg
      601 atgcggatgg tgtccttcca gccgatctcg ttcagatcgg ccttgcggac gatgccatcc
      661 cagcccacgc ggttgatcag ctggacgtcg aagaggtgga agtggatcgg gtgggtgtcc
      721 acgccgttgt gggtgatctt ccagatctgc gtgccgtccg tggcggagct gatgggtgtg
      781 acgtccacgc cgggcggcag ggtgatgccg ctgaacactt cgctcgcggg attgacgtag
      841 ggataaagga tcaggttctg ctgggtgccg gcctgggcgt tcggggtttc cacgccaagg
      901 ttcccgctca tgcggccgta ttccttctcg aaggcctcgc ccatctcgtc ctggatggcc
      961 ttccgctgca ggggcatgcg gagggcggtg ccggacaggg tgtcgaagtc caggtattca
     1021 tcgtagatct gcaccacgcc ggccctggga cccgcgttct tgaaggcggt gccgtaggcg
     1081 gagttgtagg cgccctggcc cacgatgatg ggatgctggg aggattcgaa cacgccggag
     1141 ccgtcgggct ggtgcgcgaa ggcggcgttc agcctggcca ggtcgaaggc cgcgccgggg
     1201 gtgccgccca ctttgatctg catgacggtg cgggtgttcg ggccgtagcc ggggagggtc
     1261 gagggcgccc cgccggtgcc ggtgaggtcc gcattcccgg tgtagtagtc gtagcgggga
     1321 tcccgggccg ggaaggccgc gggcgcatcg ttgtagagga tcagggtctt gcccgcgtag
     1381 gcggagagat ccacgatgac gtccgcccgc tcggcgggcc ccagcaggag cgagtgcttg
     1441 tccacattgc ccgcgttgaa cacggtggga tccgtcaccc aggtgatggg ctggggcggg
     1501 atgaccaccg gcgcgggaag gaagccgccc tcggtgccga tctggatcca ggagggtccg
     1561 gccgggctga gcgccaggtc gggcgtgggg aagacgcccg cggggtccgt gagggccgcg
     1621 gccacttcgg cggcgttgag cgcgacttcc gtgccggtgg cgtccgcctc gtagaagtgc
     1681 aggttgaaga agcggtcatt ggcggcgttc aggatgcgca gccggtaggg cttggcttcc
     1741 aggttcaccg tggggtaggc cgtgccgttg accagcggcg tgtcgttgaa ggcctccatg
     1801 cccatggaga tgaagggggt tccgggcatc aggggcggct ccacccagcc gaggtcgggg
     1861 tcggccatgg ggtcgtagta ggggttcgca atgggcgggt agagcacgtc gttcgtgggc
     1921 ggccagaacc agggcccgta cgcccaccgg ccgtactggt tgacgccgga gacatcgccg
     1981 gggttctggg cgggcacgta cacgtgcggc acccagaggt tgccgtagcc gccccagaga
     2041 tccatgttcc agaggggatc ctgcacggcg agctgctcca cgctgggcac gaaggtcttg
     2101 tcctggatga ccagggggat ctggtcagcc gggatcacgc cgttggcgat gagcttctgc
     2161 tcggccgggt cggtgatcgt gtaggccgca gcttcgcccg cgtagacgtt caggcgggtg
     2221 atgccccagg cgtggtcgtg gtagaacatc agccgggcgc tctgctggtt ggtgtagaag
     2281 aaggtcatgg caccgggacc cgggtcgggc atgtcgggca cgttgaccac actgacgccc
     2341 ttggggtacg aggtcgtctc accggccggc gtgacccact ggtgcggcgt gccgtcgctg
     2401 atccagggcg agatgccgcc atgcaggtgc agggtggcgc ggttctccga atagacgccc
     2461 atgggcttgg ggatcatccc ggccatgggg tgttggggat cgggctcggc cattcccgcc
     2521 atgtcggggc ccatccctgc gcccatgacg gtggtgtcca cgggaaggaa caggttgccc
     2581 gccacgcctg tggggagcag gttgcggaag gtgatgcgga cgggcctgtc cttggtggcg
     2641 gagatgaggg gtcccaggta gtggggccgg tccacgccga tggcctgcgt gccgttgggc
     2701 agcaggatgg gggtgccgtc ggggttgacg agcggcgtgg cgccgggggt cgtggcggtg
     2761 gccagctgca cgtagccgcg cagcagggtg gcgggcaggt ccgagtgcat ctgctcccgg
     2821 tactgcacga cggcgatctc gtaggaatcg gttccgggat aggtggtggt gtcgggcacc
     2881 gccacgggga tgtactggcc gaggttgttg gcgccggcgg cgcccaggcc gggaagggta
     2941 tccacaaact tccggatgcc gggcgtgacg tagcccgatc caggcgtcac cacggtcaga
     3001 gcggtcacgg ccccggtgag ggggtcgatg gtcgccgtcg ccgtggcacc cgaggcggtg
     3061 ggcacggggc tggtgatctc caccgtcgga gcggtggtgt agccggtgcc gccgtccatc
     3121 acgtggagtt gcaggatggc gccggtcgtc agatccacct gggcatggcc catggcgccg
     3181 gttccatcgc ccgtgatgac cacgttggca gcggaaaggc gcagggggct gttggcgtag
     3241 ttgcccacgc tgaagtagtg cggggcgctg gacggatcgg ccatgcccgg c
//
LOCUS       DATGWW010000713         1883 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_221935, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000713 DATGWW010000000
VERSION     DATGWW010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221935"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1093)
                     /locus_tag="VK150_10340"
     CDS             complement(<1..1093)
                     /locus_tag="VK150_10340"
                     /inference="COORDINATES: protein motif:HMM:TIGR00641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HLP31751.1"
                     /translation="MYQKDFLEQVRAQLTVKEDPAKLRERAFETSSGIPLKNSYTPAD
                     LAGHDPLKDLGAPGSFPFTRHVQPTGYRGRLWTMRQYAGFATAEESNARYRYLLEQGT
                     TGLSVAFDLPTQIGMDPDHDMALGEVGKVGVSISSIHDMRTLFRDIPLDQVSTSMTIN
                     APASVLLALYLAVAEEQGVPWTKVSGTIQNDILKEYMARGTYIFPPRQSLRLITDIFA
                     FCAEQVPNWNTISISGYHIREAGCTAAQEIAFTLGDGIAYVQAALDAGLSLESFAPRL
                     SFFFNAHNQFFEEVAKFRAARRLWARIMKERFKTTDAKSQMLRFHTQTAGSTLTAQQP
                     DNNIVRTTVQAMAAVCGGTQSLHTNSRDEA"
     gene            1186..>1883
                     /locus_tag="VK150_10345"
     CDS             1186..>1883
                     /locus_tag="VK150_10345"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HLP31752.1"
                     /translation="MPLPPPPPAIKLLVGADLWTAQGPQPGQAVAIRKGKILAVGPVE
                     TLAKAHPKAQRVELPGGTLLPGLIEGHAHVAGLGALAQQVDLTGLESLPATTQKLRAW
                     TSSHPKGWLVGRGWDQNRWPGQAFPRAVDLDAFTGSRPAFLQRVDGHAAWVNSAALAK
                     AGIGPSTPDPEGGRILKDALGRPTGILLDTAVDLVAKLLPRPSDSDLDAQLKTGLLAL
                     RAEGFTAVADMGVGP"
BASE COUNT          284 a          657 c          632 g          310 t
ORIGIN      
        1 gggcctcgtc gcggctgttg gtgtgcaggc tctgcgtgcc gccgcacacc gccgccatgg
       61 cctgcacggt ggtgcgcacg atgttgttgt ccggctgctg ggcggtgagg gtgctgcccg
      121 cggtctgcgt gtggaaacgc aacatctggc tttttgcatc ggtcgtcttg aaacgttcct
      181 tcatgatccg ggcccagagg cggcgcgcgg cgcggaactt ggcgacttcc tcgaagaact
      241 ggttgtgggc gttgaagaag aaactgagtc tcggcgcgaa ggattccagg ctcaggccgg
      301 catccagcgc cgcctgcaca taggcgatgc cgtccccgag ggtgaacgcg atctcctggg
      361 ccgcggtgca gcccgcctcg cggatgtggt agcccgagat cgagatggtg ttccagttcg
      421 gcacctgctc tgcgcagaag gcgaagatgt cggtgatgag gcgcaggctc tggcgcggcg
      481 ggaagatgta ggtgccccgc gccatgtact ccttgagaat gtcgttctgg atggtgccgc
      541 tcaccttggt ccagggcaca ccctgctctt cggccaccgc cagatagagg gcgaggagca
      601 cagaggccgg ggcgttgatc gtcatgctgg tgctgacctg atccagcggg atgtcgcgga
      661 acagcgtgcg catgtcgtgg atggagctga tgctcacacc caccttcccc acctcgccca
      721 gggccatgtc gtggtccgga tccatgccga tctgcgtggg caggtcgaag gccacggaca
      781 gccccgtggt gccctgctcc agcaggtagc ggtaccgcgc gttgctctcc tcggcggtgg
      841 caaatcccgc gtactgccgc atcgtccaga ggcgaccgcg gtagcccgtg ggctgcacgt
      901 ggcgcgtgaa cgggaaggaa ccgggcgcgc caagatcttt cagcggatcg tgcccagcga
      961 gatccgctgg cgtatagctg ttcttcaggg ggatgcccga gctggtctcg aaggcgcgct
     1021 cgcgcagctt ggcgggatcc tccttcaccg tgagctgggc gcgcacctgc tccaggaaat
     1081 ccttctggta catgaaacct ccgagacatt ccaccttatc gcccaggcca agggggacgc
     1141 tacactggcc ctccccacaa accatcccga ttcgaagagt cgcccatgcc gctgccgcct
     1201 ccgcctccag ccatcaagct cctcgtcggc gccgacctgt ggaccgccca gggcccgcag
     1261 ccgggtcagg ccgtcgccat ccggaaggga aagatcctcg ctgtgggtcc ggtggaaacc
     1321 ctggccaagg cccatcccaa ggcccagcgc gtcgagcttc ccggcggcac cctgctgccg
     1381 gggctcatcg aaggccatgc ccacgtggcc ggcctgggcg ccctggccca gcaggtggac
     1441 ctgaccggcc tcgagagcct gcccgcgacg acccagaaac tccgcgcctg gacctcctcc
     1501 catccgaagg gctggctcgt ggggcgcggc tgggatcaga accgctggcc cggccaggcc
     1561 ttcccccggg ccgtggacct ggacgccttc acgggctccc gtcccgcctt cctccagcgg
     1621 gtggacggcc acgccgcctg ggtgaactcc gcggccctcg ccaaggccgg catcggcccg
     1681 agcaccccgg atcccgaggg cggacgcatc ctcaaggatg ccctggggcg gcccaccggc
     1741 atcctcctcg acaccgccgt ggacctggtg gccaagctcc tgccccgccc ctcggacagc
     1801 gacctggacg cccagctgaa gaccgggctc ctggccctgc gggccgaggg cttcaccgcc
     1861 gtggccgaca tgggcgtggg ccc
//
LOCUS       DATGWW010000714         1567 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_222638, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000714 DATGWW010000000
VERSION     DATGWW010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222638"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="VK150_10350"
     CDS             <1..278
                     /locus_tag="VK150_10350"
                     /inference="COORDINATES: protein motif:HMM:NF017669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HLP31753.1"
                     /translation="ASVLAGHYEQAVDRESAFEKLKARAEEAMKQEAAEAQAKDAAKA
                     SKEPARRSDSMIEAFGKSVIRAAGSSIGRQIIRGVMGSIFGGGGRRR"
     gene            complement(367..1347)
                     /gene="dusB"
                     /locus_tag="VK150_10355"
     CDS             complement(367..1347)
                     /gene="dusB"
                     /locus_tag="VK150_10355"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HLP31754.1"
                     /translation="MTFPHAPFQIRDVEVSNRLVMAPLHEITDQPFRKFIREIGGVGL
                     TVSEMISSEALIRHAVKAEKMMAATGERPLSMQISGGRPEALAEGAELCEAAGADLVD
                     LNMGCPASNVTKGGAGSALLRDIKLAERCVTAMVKAVKVPVTVKMRAGWDASQKDRGE
                     FLDFLRMFEAAGVQALAIHPRTRAQQYEGHADWSIIARAVEAGTSYPIIGNGDVNTAA
                     DAFRMVEETGCTAVMIGRGALYNPFLFQQILDPGFAVTTEMRIDATLRLFQILLDLLE
                     PREALHKIKKIGAWFTKGVPGGHGFRQNLHAASDPQALMAAIDALRHQAA"
BASE COUNT          269 a          540 c          521 g          237 t
ORIGIN      
        1 aggcctccgt gctggcgggc cactacgagc aggccgtgga ccgggagagc gccttcgaga
       61 agctcaaggc ccgcgccgag gaggccatga agcaggaggc cgccgaggcc caggcgaagg
      121 atgcggccaa ggcctcgaag gagcccgcgc ggcgctccga cagcatgatc gaggccttcg
      181 gcaagagcgt catccgcgcc gccggcagct ccatcggccg ccagatcatc cggggcgtca
      241 tgggctccat cttcggcggc ggcggacgcc ggcgctgaat caccagcaac caggaagcca
      301 gccatggatg aacacccatg agggctcatg cccatccgtg ttcatccagg ttcatccgtg
      361 gcgaagtcag gccgcctgat gcctcagcgc gtcgatggcg gccatgaggg cctggggatc
      421 gctggcggcg tgcaggttct gacggaagcc gtggccaccg ggcacgccct tggtgaacca
      481 ggccccgatc ttcttgatct tgtgcagagc ctcccggggc tccagcaggt ccagcaggat
      541 ctggaagagc cgcagggtgg cgtcgatgcg catctccgtg gtcaccgcga agccgggatc
      601 caggatctgc tggaaaagga atggattgta gagagcgccg cggccgatca tcaccgcggt
      661 gcaacccgtc tcttccacca tgcggaaggc gtcggcggcc gtgttcacat cgccgttgcc
      721 gatgatggga tacgacgtgc ccgcctccac cgcccgggcg atgatgctcc agtccgcatg
      781 accctcgtac tgctgggccc gggtgcgggg gtggatggcc agggcctgca cgcccgccgc
      841 ctcgaacatg cgcaggaaat ccaggaactc gccgcggtcc ttctgcgagg cgtcccagcc
      901 ggcccgcatc ttcaccgtca ccggcacctt cacggccttc accatcgccg tgacgcagcg
      961 ctctgccagc ttgatgtcgc gcagcagcgc cgacccggcc ccgcccttgg tgacgttgct
     1021 ggccgggcag cccatgttga ggtccaccag gtcggcgccg gcggcctcgc acagttcggc
     1081 accctccgcc agcgcctcgg gacgtccccc ggagatctgc atggacagcg gccgctcgcc
     1141 cgtggcggcc atcatcttct cggccttcac cgcatgccgg atcagcgcct cgctgctgat
     1201 catctccgag acggtgagac ccacgccacc gatctcgcgg atgaacttcc ggaagggctg
     1261 gtcggtgatc tcgtgcaacg gcgccatgac gaggcggttg gacacctcga catcgcggat
     1321 ctggaaaggg gcgtggggaa aggtcacagc gggcgttcct cggaccttcc agtttacccg
     1381 gagcccggaa ttccgccgac cgccaagtgc caggcagacc cgcccaaggc ccttaggcct
     1441 ccttgggttc cgcctccggc gcctggaaca ggctgaaccc gtaggccagg accatcacgg
     1501 ccacgcagcc gatgaggttg taccagagga aggagatccg ggtgagccag aagcagagca
     1561 gtacgcc
//
LOCUS       DATGWW010000715         1570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_167088, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000715 DATGWW010000000
VERSION     DATGWW010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167088"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            604..1227
                     /locus_tag="VK150_10360"
     CDS             604..1227
                     /locus_tag="VK150_10360"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HLP31755.1"
                     /translation="MTIPIILEEAPTPATMAPVTRSPGDTGIAKAPEGTGTIDASLLR
                     LEPVLPMAPRTTNIEEWPDPLDHPTKAAVDVRLPVAVGGTGLAHGTGQGHGSGAGQGS
                     GRAMIRGVPGMNPELNLADLEVIHEEIPQYPVLAEWGRIQGDVVVRVTINEKGVPIKT
                     ELQEGPPALRAETMRAVKLWRFGRGIFRGRKVEATFDMTFRYILRGP"
     gene            complement(1295..>1570)
                     /locus_tag="VK150_10365"
     CDS             complement(1295..>1570)
                     /locus_tag="VK150_10365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31756.1"
                     /translation="EGGWRAINKFIIRNRQFFEASNMPVFTPGLGKEGPSNFMDMVYS
                     VPVLFVVDRQGKLAEIHIGYREGFVGEAVMRALRERPQPVAAPTPAP"
BASE COUNT          276 a          500 c          534 g          260 t
ORIGIN      
        1 aggctcgggc caggctgggc gggggccttg gattctgcgc cgaaatccag gggagtcttg
       61 tctcgctgaa ccaggggaca aataccttct gttggcgaag tggcgttgtt gtagatcccc
      121 tgggcactgg cggccaggga gatcagtagg ggcagcgcgc gtctgaggga tgggccaagc
      181 ctcatgggac ctcctggatc gatggattac gctatccaat cggcggtcca ggcccgtata
      241 ctcggtggcg aaatcatcca ttccggttgc gaacctccat cgtgctacgg cctcgcgcca
      301 gcactcagtt catatgcgcc agcagggcgg cgcatgagca ataaagcatg aacccgcatg
      361 atcacagacg ctccggcttc acttccccag gcctcgggac tcttccccag tgtcgatgag
      421 ccgagggacc cggccctccc tcccggcctg cagccagaac caatcctccg ggcagcccca
      481 gcgcggaacc gttggctgag tctcctgctg gcattcatcg tttacgggct tctgacaggg
      541 acgcttgctt tctgggtggt ggcatcccgg gttgtccctt cacggcgtga cgacagggag
      601 cgcttgacca tccccatcat cctcgaggaa gcgccgaccc ccgccaccat ggccccagtc
      661 acccggtcac ccggcgacac gggcatcgcc aaggcgccgg aaggaaccgg caccatcgat
      721 gccagcttgc tgcggctgga gccggtgctt cccatggcgc cccggacaac aaacattgag
      781 gaatggccgg atccactgga ccacccaacc aaggcggcgg tggatgtgcg ccttccggtg
      841 gcggtcggcg gcacggggct ggcccatggc acgggccagg gccacggcag tggcgcgggc
      901 cagggatctg gacgggccat gatccgggga gtgccgggca tgaatcccga attgaacctg
      961 gccgacctgg aggtgatcca cgaggagatc ccccagtatc ccgtgctggc cgagtggggg
     1021 cggatccagg gcgacgtggt ggtgcgggtc accatcaacg agaagggggt gcccatcaag
     1081 accgagctgc aggagggccc gccggctctc cgggccgaaa ccatgcgcgc cgtgaagtta
     1141 tggcggttcg gtcgcgggat attccggggt cggaaggtgg aagcgacctt cgacatgacc
     1201 ttccgctaca tcttgcgcgg gccctgaaac gccacaccca ccgggatggg gaggcggcgg
     1261 gcgtggcgtc ggagcgcgtt cggctggagg cggatcaagg agccggggtc ggcgccgcca
     1321 cgggctgggg gcgctctcgc agggcccgca tgacggcctc accgacgaat ccttccctgt
     1381 agccgatgtg gatctcggca agcttcccct gccggtcgac gacaaacagc accggcacgg
     1441 aatagaccat gtccatgaag ttggaggggc cctccttgcc gaggccgggc gtgaagaccg
     1501 gcatgttgct ggcctcgaag aactgccggt tccggatgat gaatttgttg atggcccgcc
     1561 agcccccctc
//
LOCUS       DATGWW010000716         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_167137, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000716 DATGWW010000000
VERSION     DATGWW010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167137"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..257
                     /locus_tag="VK150_10370"
     CDS             <1..257
                     /locus_tag="VK150_10370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31757.1"
                     /translation="SQPLTLFNVARAFSRRVPLPKLVSIEPSIRPYLSCVLADAMASD
                     GQTLVGPDNLDVQLIPRPDFLRYALDMAGQPYQAYGTLGS"
     gene            288..1247
                     /locus_tag="VK150_10375"
     CDS             288..1247
                     /locus_tag="VK150_10375"
                     /inference="COORDINATES: protein motif:HMM:NF025341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="retroviral-like aspartic protease family
                     protein"
                     /protein_id="HLP31758.1"
                     /translation="MAELRAEFAKGLADLWSGMRQLQDQLASSQVGDMQTDAAQDAAS
                     SVHQAVVERLADGPRALALRAERRVLAAQATELACSLVAVEMPAGPVEELPASPIPAA
                     RPGEPQPTIECGILGGTAPGRGRCLLDTGAAFTLISSQVARTFGLAVRPCHASFGVAN
                     GATAAVVGEVDLTLQVHLYLQLRLVGVKVQDMGEGSLFLLGSDVLRGAAGLLDEVQVI
                     PGVCVRWSRLAQGAQYTTPVVDPIGPVPPLEGVRVAFTPAAAATPAAAAPVAAAPTAP
                     PAVADSPLAAAGPAAATPAATPAAPEALPRPPRAAGPSPTAQD"
BASE COUNT          226 a          546 c          591 g          271 t
ORIGIN      
        1 acagccagcc gctgacgctg ttcaacgtgg cgcgcgcatt cagccgccgc gtccccctcc
       61 cgaagctcgt ctctatcgag ccttccatcc ggccctacct gtcatgcgtc ttggccgacg
      121 cgatggcatc tgatggccag acgctggtgg ggccggacaa cctggacgtc cagctcatcc
      181 cgcgccctga cttcctgagg tacgcgctgg acatggcagg gcagccgtac caggcatacg
      241 ggacgctggg gagctaggtg gtagcttccc agcagcagga cccagggatg gcggagcttc
      301 gggcggagtt tgccaagggg ctggcggacc tgtggtcggg gatgcggcag ctgcaggacc
      361 agctggccag cagccaggtg ggcgacatgc agacggatgc cgcacaggac gcggcttctt
      421 cggtccacca ggccgtggtg gaacggctgg cggacggccc cagggcgctg gccctgcggg
      481 cggagcggcg ggttctggcg gcccaggcga cggagctggc ctgctccttg gtcgcggtgg
      541 agatgccggc agggccggtg gaggagctgc ctgcttcccc catccctgcg gcgcggccag
      601 gggagccgca gcccaccatc gagtgtggca tccttggcgg gactgcccct gggcgtgggc
      661 gttgcctcct agacactggg gcggcgttca cgctcatatc ctcccaggtg gcgaggacgt
      721 tcggcctggc ggttaggccc tgccacgcgt cgtttggggt ggccaatggg gctaccgcgg
      781 cggtggtggg ggaggttgac ctgaccctgc aggtacacct ttacctccag ctgcggttgg
      841 tgggggtaaa ggtgcaggac atgggcgagg ggagcctgtt cctgctaggt agtgacgtgc
      901 tccggggggc agctggcctg ttggacgagg tccaggtcat ccccggggtg tgcgtcaggt
      961 ggagtcgatt ggcccagggg gcccagtaca ccacgccagt ggtggacccc ataggcccgg
     1021 tgcccccact ggagggggtc cgggttgcct tcacccctgc ggccgccgcc acccccgcgg
     1081 ctgccgcacc tgtggccgcc gcccccacgg cgccccccgc ggtggctgac tcccccttgg
     1141 ccgccgctgg cccggccgcc gccacccctg ccgccacacc tgctgcgccg gaggcgctcc
     1201 ccaggcctcc ccgcgcggca ggcccatcac ctacggccca ggactagggc gaccctgacg
     1261 accctgaggg gcgccaggca ctgctgagcc tgaggacccg ctggttcacc cctgctgagc
     1321 tggctcaggt ggaggacatc ttggtccgcc gccagaaggt ggtgggggcc aagtataacc
     1381 ctgccgtgat gtttggcctt gtggagaagc tgtcagagct ctccaaggac aagttcgtcc
     1441 cactgcccct tcgctctgcg ttggggcggt gcctttaacg ccgctggcct ggtaccaatg
     1501 gcaagcccac catcagagcc gttgtggtgg gggccatcta ggcgtatgag acgggcggcg
     1561 cgggggccct aggcacattc atgcatgagt gtggcttcaa gggctaccag ccagggtctg
     1621 ctgcccgcca ggac
//
LOCUS       DATGWW010000717         1902 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_167499, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000717 DATGWW010000000
VERSION     DATGWW010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167499"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..805
                     /locus_tag="VK150_10380"
     CDS             <1..805
                     /locus_tag="VK150_10380"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLP31759.1"
                     /translation="ELEAERLRACLAGVDGPFEELFSGEIFFYRALRQLYPDARIYAR
                     SHNFYSLARCRQLLGHHPTSLRHALNLALYSKLEMELLADRKVTLIFITEEELAFARL
                     LSPRVRGECWPVIPAGLAASPNLKPPTVPRLVFFGTAASHTTLGLDLLARKIFPALRA
                     NLPGAEFHLFGHGTEPYHDPAQGIQGHGRFVGEGLPFGGDGLFVVPDVHGCGIKLKVA
                     DLLKAGAPFISTPLGMSGYHLAPHPHILVEDLEDWAMALERYFRAQALS"
     gene            complement(802..>1902)
                     /locus_tag="VK150_10385"
     CDS             complement(802..>1902)
                     /locus_tag="VK150_10385"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLP31760.1"
                     /translation="GLAASAREVTALSLLPHDPATRGFPATEAEVEERIVYRYLSLRR
                     IPGLAHVFIFGWSFLSTLAWCWARRGQPRRVICDVLDLSISAGALLASKVARTPSVAL
                     VTDIPDYLHSYIGGGESTLGRGIIRAYRVLSTFFMERYDGYVLLTEAMNPLVNLKGRP
                     HLVMEGMADPGMGLVPNSLEGKAPEQVVIYAGALYAKYGVATLLEAFLRVPREDARLW
                     LYGSGELEADLPAYEARDPRIRYWGVRPNAEVVAAEVRATLLVNPRPSSEAFTRFSFP
                     SKNMEYMASGTAVLTTRLPGMPAEYLEHVFTFSEESVAGMAGTLERLLDLPREALHAR
                     GEAAKAFVLGRKSSLIQAGRIHAFLETLGRPV"
BASE COUNT          294 a          652 c          665 g          291 t
ORIGIN      
        1 cgaactcgaa gccgagcggc tccgggcctg cctggccggc gtcgacgggc ccttcgagga
       61 gctgttttcc ggggagatct tcttctaccg agccctccgc cagctctatc cggatgcgcg
      121 gatctacgcc cggtcccaca acttttacag cctggcccgg tgccggcagc tgctgggcca
      181 ccaccccacg agcctccgcc acgcgctcaa tctggccctg tactccaagc tggaaatgga
      241 gctcctggcc gaccggaagg tcaccctcat cttcatcacg gaggaggagc tcgccttcgc
      301 gcggctgctc tcgccgcggg tgcggggcga atgctggccg gtgattccgg cgggacttgc
      361 ggcttccccg aacctgaagc cccccacggt gccacgcctc gtgttcttcg gcacggcggc
      421 ctcccacacc accctcggcc tcgacctcct ggcccggaag atcttcccgg cgctccgcgc
      481 gaacctgccc ggcgcggagt tccacctctt cggccacggc accgaaccgt accacgatcc
      541 cgcgcagggc atccagggcc acggccgctt cgtgggggag ggtctgccct tcggcggcga
      601 cggcctgttc gtggtgccgg atgtgcacgg ctgcgggatc aagctgaagg tcgccgacct
      661 gctgaaggcg ggcgccccct tcatctcgac gcccctgggg atgtcggggt accacctggc
      721 gccgcatccc cacatcctcg tggaagacct ggaggactgg gccatggccc tcgagcggta
      781 cttccgcgcg caggccttga gctagaccgg ccggcccagg gtttccaaaa aggcgtggat
      841 ccgtcccgcc tggatgaggc tgctcttccg gccgagcacg aaggccttgg cggcctcccc
      901 ccgggcatgg agggcctcgc ggggcaggtc cagcaggcgt tccaaggtgc ctgccatgcc
      961 ggccacggat tcctcggaga aggtgaagac gtgctcgagg tactcggcgg gcatgccggg
     1021 caggcgggtg gtgagcactg cggtgccgga ggccatgtac tccatgttct tggaggggaa
     1081 ggagaaccgt gtgaaggcct cggacgacgg ccgcggattg accaacaggg tggcccgcac
     1141 ttcggcggcg accacctcgg cattcgggcg cacgccccag tagcggatcc gcggatccct
     1201 ggcctcatag gccggaaggt ccgcctccag ctcgccggac ccgtacagcc acagccgggc
     1261 gtcctcgcgg ggaacccgca ggaaggcctc cagaagggtg gccacgccgt acttggcgta
     1321 gagggcccca gcgtagatca ccacctgttc cggggctttg ccctccaggc tgttgggcac
     1381 cagccccatg cccgggtccg ccatgccctc catcaccagg tgggggcggc ccttcaggtt
     1441 caccagcggg ttcatggcct ccgtgagcag cacgtagccg tcgtatcgct ccatgaagaa
     1501 ggtcgatagg acacggtagg cgcggatgat gcctcggccc agggtcgatt cgcctccgcc
     1561 gatgtagctg tggaggtaat cggggatgtc ggtgaccagg gcgactgagg gcgtgcgggc
     1621 caccttcgag gccaggaggg ccccggcgga gatggagagg tccagcacgt cgcagatgac
     1681 gcgccggggc tgaccgcgcc gggcccagca ccaggcgagg gtggacagga aactccagcc
     1741 gaagatgaag acgtgggcga ggcccgggat ccggcgcagg gagaggtagc ggtagacgat
     1801 ccgctcctcc acctcggctt cagtggctgg gaagccgcgg gtggccggat cgtggggcag
     1861 cagggagagg gccgtcacct ctcgggcgga ggccgcgagc cc
//
LOCUS       DATGWW010000718         2204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_168335, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000718 DATGWW010000000
VERSION     DATGWW010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2204
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168335"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..454)
                     /locus_tag="VK150_10390"
     CDS             complement(<1..454)
                     /locus_tag="VK150_10390"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF013113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HLP31761.1"
                     /translation="MALNPHVAALTDRIRQRSRPTREAYLAQLREAASATPHRCEVSC
                     ANLAHTFAASGPDKAALREGKQPNLGLVTAYNDMLSAHQPLGAFPRWIKEAARGAGAT
                     AQVAGGVPAMCDGITQGQPGMELSLFSRDVIAMATAVALSHNVFDAALC"
     gene            563..2023
                     /gene="zwf"
                     /locus_tag="VK150_10395"
     CDS             563..2023
                     /gene="zwf"
                     /locus_tag="VK150_10395"
                     /inference="COORDINATES: protein motif:HMM:TIGR00871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HLP31762.1"
                     /translation="MKTLPDFDMVLFGGTGDLAMRKLLPALYQQVKAGTVSAGSRVLA
                     AARKQLSREAFLELAETSCRPFLGEAYDAETWKAFAERVSYFPMDVQDPGSYAALGEA
                     LGRHPDRVRVFYYSTSPDFFADISANLGAAGLVSACSRVVVEKPLGHDLDSSREINDA
                     VGRHFTERQIFRIDHYLGKEPVQNLLALRFGNVLFEPLWRREWVQDVQITVAEQLGVE
                     GRGDFYEHTGALRDMLQNHLLQLLCIVAMEPPTASDPDAVRDEKLKVLRSLKPFTPAD
                     VATKTVRGQYKAGAVGSKPVVAYAEEPGVAPDSRTETFVAVKAEIDTWRWAGVPFFLR
                     TGKRMPEKLAEIVINFRPVPHPIFGEASHGGRANRLIIRMQPDESMRLYLVAKQPGDA
                     MALHPVNLNLDFAESFRARRLEAYERLLLDAIRGRLTLFVRRDEQEAAWRWVEPILDS
                     WEASEDRPKAYTSGSWGPAASSALLSRDGLAWNEED"
     gene            2025..>2204
                     /locus_tag="VK150_10400"
     CDS             2025..>2204
                     /locus_tag="VK150_10400"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF013356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HLP31763.1"
                     /translation="MPALLEFADATTLTAALCHHVVHRLKEDLARQDRAVLVVSGGKS
                     PVPLFKALAQQPLAWD"
BASE COUNT          333 a          759 c          773 g          339 t
ORIGIN      
        1 ggcagagggc cgcgtcgaag acgttgtgcg acagggccac ggcggtggcc atggcgatga
       61 catcgcggga gaagagggac agctccatcc caggctgacc ctgggtgatg ccgtcgcaca
      121 tggcgggcac cccgccggcc acctgggccg tagccccggc gccccgcgcg gcttctttga
      181 tccagcgggg aaacgcgccc aggggctggt gggcggacag catgtcgttg taggccgtca
      241 ccaggcccag gttgggctgc ttgccttccc gcagggcggc cttgtccggg cccgaggcgg
      301 cgaaggtgtg ggcgaggttc gcgcaggaca cctcgcaacg gtggggagtg gcggaggccg
      361 cctcccgaag ctgggccagg tacgcctccc gggtcggccg gctgcgctgc cggatccggt
      421 ccgtgagggc ggccacgtgg ggattcaggg ccatgggagt tccttttccg ggccggtttt
      481 gggaccgggc tgtgtaacat tattacgttt tgtaaccggt tgcataaaaa ataatcgtag
      541 tatttctaca ttcggagtcc ccatgaagac cctgcctgat ttcgacatgg tgctgttcgg
      601 cgggacgggc gacctcgcca tgcgcaagct gctgcccgcc ctctaccagc aggtgaaggc
      661 gggcaccgtg agcgcgggat cgcgggtgct cgcggccgcc cggaagcagc tcagccggga
      721 ggccttcctc gaactggcgg aaaccagctg ccggcccttc ctgggcgagg cctacgatgc
      781 cgaaacctgg aaggccttcg cggagcgcgt cagctacttc cccatggatg tgcaggatcc
      841 cgggagctat gccgccctgg gcgaggccct gggccggcat ccggaccggg tgcgggtctt
      901 ctactactcc acctcgccgg atttcttcgc cgacatctcc gcgaacctgg gcgccgcggg
      961 cctcgtctcc gcctgctccc gcgtcgtggt ggagaagcct cttggccacg acctggattc
     1021 ctcccgggag atcaacgacg cggtggggcg ccacttcacg gagcggcaga tcttccgcat
     1081 cgaccactac ctgggcaagg agcccgtgca gaacctgctg gcgctgcgct tcgggaacgt
     1141 gctcttcgag cctctgtggc gccgcgagtg ggtgcaggac gtgcagatca ccgtggccga
     1201 gcagctgggc gtggagggcc gcggcgactt ctacgagcac accggcgccc tgcgcgacat
     1261 gctgcagaac cacctgctgc agctgctctg catcgtggcc atggagccgc ccacggccag
     1321 cgatcccgac gcggtgcgcg acgagaagct gaaggtgctg cgctcgctca agcccttcac
     1381 gcccgcggac gtggccacca agaccgtgcg gggccagtac aaggcgggcg ccgtgggcag
     1441 caagcccgtg gtggcctatg cggaggagcc cggcgtggcg ccggacagcc gcaccgagac
     1501 tttcgtggcg gtgaaggccg agatcgacac ctggcgctgg gcgggcgtgc ccttcttcct
     1561 ccgcaccggc aagcgcatgc cggagaagct ggcggagatc gtcatcaact tccggcccgt
     1621 gccccatccc atcttcggcg aggcgagcca cggcggccgg gccaaccgcc tgatcatccg
     1681 catgcagccc gacgagagca tgcggctcta cctggtggcc aagcagcccg gcgacgccat
     1741 ggcgctgcac cccgtgaacc tcaacctcga cttcgccgaa tccttccgcg cccgccgcct
     1801 ggaggcctac gagcggctgc tgctggacgc catccgcggg cggctcaccc tcttcgtgcg
     1861 ccgcgacgag caggaagcgg cgtggcggtg ggtggagccc atcctcgaca gctgggaggc
     1921 cagcgaggac cggcccaagg cctacacctc cggcagttgg ggccccgcag cctccagcgc
     1981 cctgctctcc cgggacggcc tcgcctggaa cgaggaggac tgaggtgccc gccctcctgg
     2041 agttcgccga cgccacgacc ctcacggcgg cgctgtgcca ccacgtggtt caccggctga
     2101 aggaggacct ggcccggcag gaccgggcgg tcctggtggt gtccggcggg aagagccccg
     2161 tccccctctt caaggccctg gcccagcagc cactggcctg ggac
//
LOCUS       DATGWW010000719         4134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_168410, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000719 DATGWW010000000
VERSION     DATGWW010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4134
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168410"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VK150_10405"
     CDS             <1..277
                     /locus_tag="VK150_10405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31764.1"
                     /translation="FAVTWADGSPIDPTATVKVATSDYLYGGGDSIPTLKKGRKPFTT
                     GITLRQMLLDQCAALGKAKQDLLPPDPGRYTVPAPIQEAIRNKTFKL"
     gene            287..1252
                     /locus_tag="VK150_10410"
     CDS             287..1252
                     /locus_tag="VK150_10410"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HLP31765.1"
                     /translation="MERRDFLASLGAAATLATGASGLPLRGSDAPQPAAAPVSGRITL
                     LHTNDTHSRIEPFGPGNGAISGLGGVARRATLVKQLRQQLGSVLLLDAGDTFQGTPYF
                     NRYKGRLDYQLMRMVGYDAGTLGNHDFDNGVGPLVEAMESMEQLQHPNPPFAFVNCNF
                     DCKGAPALAKRVRPYLVREFPGVRVGITGVGVAFAGLVAPKNHEGITWKDPYESLRPV
                     VRRLREVEKVDLVVVLSHLGYNLNGTAPDDLQMPGQVAGIDAIIGGHSHTFLDTPTRV
                     KQAQGETLVFQVGFGGVNLGRMDFAVARGAVKAASGASMPVLASA"
     gene            1408..3630
                     /locus_tag="VK150_10415"
     CDS             1408..3630
                     /locus_tag="VK150_10415"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: protein motif:HMM:TIGR00178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HLP31766.1"
                     /translation="MAAQKIIWTDIDEAPALATYSLLPIIQAFTKGTGIEVTTSDISL
                     AGRILANFPEHLTPAQRVPDNLAMLGELAQKPEANIIKLPNISASIPQLIAAIKELQS
                     QGYQVPDYPEQPTEEVEKAIQARYAKVLGSAVNPVLREGNSDRRAPLSVKNYAKKHPH
                     KMGAWAPDSKARVAHMERGDFYGSETSVTVPKATSVRIEFVGADGGVKVLKEKTALKD
                     GEILDASVMSVKALRAFYAEQIDKARQEGLLLSLHLKATMMKISDPVMFGHAVSVFFQ
                     PVFEKHAATLNELGVNTANGLGDVYAKIQTLPEAQRAAIEADIQAVYPTRPALAMVDS
                     DKGITNLHVPNDIIVDASMPVVVRDAGKMWGADGKLHDTLAMIPDRAYATMYKAVIED
                     CQKHGAFDPATIGSVPNVGLMAQKAEEYGSHDKTFFAPADGTIRVVDAAGATLLSQKV
                     EAGDIFRACQAKDAPIQDWVKLAVTRARITGAPAIFWLDKNRAHDAQIIAKVETYLKQ
                     HDTTGLDIRILHPVDAMKLSCERIRAGKDTISVTGNVLRDYLTDLFPIIELGTSAKML
                     SVVPLLGGGGLFETGAGGSAPKHVQQFQKEGYLRWDSLGEFSAFCASLEHVANTYKNA
                     KAGVLAETLDQAIAKFLDNDKSPARKVGQIDNRGSHFYLALYWAQALAAQTKDAELQA
                     RFAKVATALAAAETKINEELIGAQGKPVDMGGYYHPDKAKTTAAMRPSATLNAIIDAM
                     "
     gene            3832..>4134
                     /locus_tag="VK150_10420"
     CDS             3832..>4134
                     /locus_tag="VK150_10420"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family ligand binding domain-containing
                     protein"
                     /protein_id="HLP31767.1"
                     /translation="MLLPGLSWVRPRIARVLQGRKEIRAGGRAVQVMPGEMIWIPGTL
                     LVDVQNIPSEGLYRAEVLSLSPEWFTHLPVTPQAPADLVPRLLPLDDPPIRAAWERV"
BASE COUNT          737 a         1533 c         1266 g          598 t
ORIGIN      
        1 cttcgcggtc acctgggccg acggcagccc catcgatccg acggccaccg tgaaggtggc
       61 gacctcggac tacctctacg gcggggggga ttcgatcccc acgcttaaga agggacggaa
      121 gccgttcacc acgggcatca ccctgcgcca gatgctgctg gaccagtgcg ccgccctagg
      181 caaggccaag caggacctgc tgcctccgga cccgggccgc tacaccgtgc ccgcgcccat
      241 ccaggaagcc atccgcaaca agaccttcaa gctctaggat ccgatgatgg aacgccgcga
      301 tttcctcgcc tccctcggtg ccgccgccac cctcgccacg ggggcctccg ggctgccttt
      361 gcggggctcc gacgcacccc agcccgccgc cgcgcccgtc tcgggccgca tcaccctgct
      421 gcacaccaac gacacccact cccgcatcga gcccttcggc ccgggcaacg gcgccatcag
      481 cggcctgggc ggcgtcgccc gccgcgccac cctggtgaag cagctgcgcc agcagctggg
      541 ctcggtgctg ctgctggacg ccggcgacac cttccagggc acgccctact tcaaccgcta
      601 caaggggcgg ctcgactacc agctcatgcg catggtgggc tacgacgcgg gcaccctggg
      661 caaccacgac ttcgacaacg gcgtgggccc gctggtggag gccatggaat ccatggagca
      721 gctccagcac cccaacccgc ccttcgcctt cgtgaactgc aacttcgact gcaagggcgc
      781 cccggccctc gccaagcgcg tccggcccta cctggtgcgt gagttcccag gcgttcgcgt
      841 gggcatcacc ggcgtgggcg tggccttcgc ggggttggtg gctcccaaga accacgaggg
      901 catcacctgg aaggatccct acgagagcct gaggcccgtc gtccgccgcc tccgggaggt
      961 ggaaaaggtg gatctggtgg tggtcctgtc ccatctcggc tacaacctga acggcacggc
     1021 cccggacgat ctccagatgc ccggccaggt cgccggcatc gatgcgatca tcggcggcca
     1081 cagccacacc ttcctcgaca cccccacccg ggtgaagcag gcccagggcg aaaccctggt
     1141 cttccaggtg ggcttcgggg gtgtgaacct gggccgcatg gacttcgccg tggcccgggg
     1201 cgcggtgaag gccgcttccg gagcctccat gccggtgctg gcttcagcct gaggcgtgac
     1261 ggaagtccca aaccgccgtc gtcacaggga aacccgcttg aagggcggct ttccccgtgg
     1321 gagtctgcct tgattaccgt tcttcggaca cacgggccgg cgaggcgcac ttgagtcagg
     1381 cccggcccga cctctacagg agccgacatg gccgcgcaga agatcatctg gaccgatatt
     1441 gacgaggcgc cggccctggc gacttattcc ctgctgccca tcatccaggc cttcaccaag
     1501 ggcacgggca ttgaggtcac cacctccgac atctccctgg ccggccgcat cctcgccaac
     1561 ttccccgagc acctcacccc ggcgcagcgg gttcccgaca acctggccat gctgggcgag
     1621 ctggcccaga agcccgaagc caacatcatc aagctgccga acatcagcgc ctccatcccc
     1681 cagctcatcg cggccatcaa ggagctgcag tcccagggct accaggtgcc ggactacccc
     1741 gagcagccca cggaggaggt ggagaaggcc atccaggccc gctacgccaa ggtgctgggc
     1801 agcgccgtga accccgtgct gcgcgaaggc aactcggatc gccgcgcgcc gctgtccgtg
     1861 aagaactacg cgaagaagca cccgcacaag atgggcgcct gggctcctga ctcgaaggcc
     1921 cgggtcgccc acatggagcg cggagacttc tacggcagcg agacctccgt cacggtgccc
     1981 aaggccacca gcgtacgcat cgagttcgtg ggcgccgacg gcggcgtcaa ggtgctgaag
     2041 gagaagaccg ccctcaagga cggcgagatc ctcgacgcct cggtgatgag cgtgaaggcc
     2101 ctgcgcgcct tctacgccga gcagatcgac aaggcccggc aggaggggct gctgctctcg
     2161 ctgcacctga aggccaccat gatgaagatc tcggatcccg tcatgttcgg gcatgccgtt
     2221 tcggtcttct tccagccggt cttcgagaag cacgctgcga ccctcaatga gctgggcgtg
     2281 aacaccgcca atggccttgg ggatgtctac gccaagatcc agaccctgcc cgaggcccag
     2341 cgcgccgcca tcgaggcaga catccaggct gtctacccca cccggcccgc gctggccatg
     2401 gtggattccg acaagggcat caccaacctg cacgtgccca acgacatcat cgtggacgcc
     2461 tccatgcccg tggtggtgcg cgatgcgggc aagatgtggg gcgcggacgg caagctgcac
     2521 gacaccctgg ccatgatccc ggatcgtgcc tacgccacca tgtacaaggc cgtcatcgag
     2581 gactgccaga aacacggcgc ctttgatccc gccaccatcg gcagcgtgcc caacgtgggc
     2641 ctcatggccc agaaggccga ggaatacggc tcccacgaca agaccttctt cgcccccgcc
     2701 gacggcacca tccgcgtggt ggacgctgcc ggcgcgaccc tgctctccca gaaggtcgag
     2761 gcgggtgaca tcttccgcgc ctgccaggcc aaggacgccc ccatccagga ctgggtgaag
     2821 ctggccgtaa cccgcgcccg catcaccggc gctccggcca tcttctggct cgacaagaac
     2881 cgcgcccacg acgcccagat catcgccaag gtcgagacct acctgaagca gcacgacacc
     2941 acgggcctgg acatccgcat cctgcacccg gtcgacgcca tgaagctctc ctgcgagcgc
     3001 atccgcgccg gcaaggacac catctcggtg acaggcaacg tcctccgcga ctacctcacg
     3061 gacctgttcc ccatcatcga gctgggcacc agcgccaaga tgctctcggt ggtgcccctg
     3121 ctgggcggcg gcggcctctt cgagaccggc gcgggcggtt ccgcccccaa gcacgtgcag
     3181 cagttccaga aggagggcta cctccgctgg gattccctgg gcgagttctc cgccttctgc
     3241 gcctcgctcg agcacgtggc caacacctac aagaacgcca aggccggcgt cctggcggag
     3301 accctggatc aggccatcgc caagttcctg gacaacgaca agtcccccgc ccgcaaggtg
     3361 ggccagatcg acaaccgcgg cagccacttc tacctggccc tctactgggc ccaggccctg
     3421 gcggcccaga ccaaggacgc cgagctgcag gcccgcttcg ccaaagtggc cacagccctc
     3481 gccgccgccg aaacgaagat caacgaggaa ctgatcggcg cccagggcaa gcctgtggac
     3541 atgggtggct actaccaccc cgacaaggcc aagaccaccg ccgccatgcg ccccagcgcc
     3601 accctgaacg ccatcatcga cgcgatgtag gcgacgcccc ggatccaagg aaacggcccg
     3661 cacccgcggg ccgtttcctt ggatcgaagc gctgacccgg acgacaggcg ggccccggga
     3721 ttgtagactg cgcgagagca tccccgcatg gcacgcccca ctccgcctcc cccttccccc
     3781 gatctgcaag gacatccggc gaccttcctg gaattccagc agggaagaga tgtgctgctt
     3841 ccaggcctga gctgggtgcg cccccgcatc gcccgggtgc tgcaggggcg caaggagatc
     3901 cgcgccggcg gcagagctgt tcaggtcatg ccgggagaga tgatctggat ccccggcacc
     3961 ttgctggtcg atgtccagaa catcccgtcg gagggcctgt accgagcgga ggtcctctcc
     4021 ctgtcgccgg agtggttcac gcatcttccg gtgacacccc aagcgcccgc cgacctggtt
     4081 ccgcgcctcc tccccctcga cgacccgccg atccgggccg cctgggagcg ggtg
//
LOCUS       DATGWW010000720         3334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_168536, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000720 DATGWW010000000
VERSION     DATGWW010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3334
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168536"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1253)
                     /locus_tag="VK150_10425"
     CDS             complement(<1..1253)
                     /locus_tag="VK150_10425"
                     /inference="COORDINATES: protein motif:HMM:NF036483.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31768.1"
                     /translation="MERQDQQIVLRGVETHNLKGFDVRIPRRSLTVITGVSGSGKSSL
                     AFDTMFREGQRRFLEALPAFARRYAGGFARPAVRAFEGMGPALAIGQRSGPPSPRSTV
                     GTLTEGWDLLRLLFARLGAAPGGIRPTRGLFSFNGEEGACPHCQGLGLEDRLDLDLLV
                     ADPSKTLREGALKVSTPNGYLMYSQVTLPVLDEVLRAHGGSVDIPWRNLGDEARRVVL
                     HGSDRLKVPYGKHPLESRLKWTGITARPRQEGFYRGLVPVMEEILRGKRNDSILRFVR
                     SATCSACQGTRLRPEALAVTWRGQRIVDLASRTVRDLRDHLARVEAAGAEAAVLAPIR
                     ADLLARCDLMAELGLGHLTLDRTAPSLSRGELQRLKLITLALGELRGLVVVLDEPSAG
                     LHPHDVGRLAKVLTRLRDQGQTIVVV"
     gene            complement(1348..1842)
                     /locus_tag="VK150_10430"
     CDS             complement(1348..1842)
                     /locus_tag="VK150_10430"
                     /inference="COORDINATES: protein motif:HMM:NF012436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin"
                     /protein_id="HLP31769.1"
                     /translation="MISKTMQAALNAQINLEQYSAQLYLAMGAHCTGKSFKGFAHWLK
                     VQATEETAHAIRLMDFILDRGGRLELQALAAPPTDFGGVIQVFEAILAHEKAITGKIN
                     ALFQQARQEQDHASEIALQWYVTEQVEEEARVGEIVDHLHAVGDQGGAIWYLDSRMGK
                     RGRA"
     gene            complement(1944..2732)
                     /locus_tag="VK150_10435"
     CDS             complement(1944..2732)
                     /locus_tag="VK150_10435"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HLP31770.1"
                     /translation="MRHLGLALSALTACLPLVCQETATDACTPRACRPLFSTSAGLAE
                     PGVLELELGAQIIRNRDHSEDRYMPTQLNLGLCPWFDVRFGWSGPTLRKDSQGELQEG
                     NGDPVVGGQALFLRQEQAGLDLGLAYWHKVPRASVARHIGTGRHDDTLLLTASCTKGR
                     WAVDLNAGANWIGRPRDAGRVRQAATSLSVTCAVAPCWNLTLDTYALAATELNGRAVS
                     TILALSRDLAPDLCVDLGVEAGLTAGAPRFSLNAGLVWRLGRLW"
     gene            complement(2884..>3334)
                     /locus_tag="VK150_10440"
     CDS             complement(2884..>3334)
                     /locus_tag="VK150_10440"
                     /inference="COORDINATES: protein motif:HMM:NF024117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HLP31771.1"
                     /translation="TRGRARLEGEAMHAFLRDLLVRWDDAAAFQACLDAPPAVAQARE
                     HALRFLEQFEARGWRHRRRRTELPLAGAAASGALGRADLVVWEDDRIHLLDFKHSRTF
                     SDQDLAGYRAQLARYAAALQGREGLPVSAWLVALRSGVWTRVDSDRD"
BASE COUNT          488 a         1125 c         1244 g          477 t
ORIGIN      
        1 accaccacga tggtctggcc ctggtcgcgc aggcgcgtca gcaccttcgc caaccggccc
       61 acatcgtggg gatggaggcc cgccgagggc tcatccagga ccaccaccag gccccgcagc
      121 tcccccaggg ccagggtgat gagcttgagc cgctgcagct cgccgcggga gaggctgggc
      181 gccgtccggt cgagggtcag gtggcccagg cccagctccg ccatcaggtc gcagcgggcc
      241 aggaggtcgg cgcggatggg cgccagcacg gcggcttccg cgcccgcggc ctcgaccctg
      301 gccaggtgat cgcggaggtc gcggactgtg cgcgaggcca ggtcgacgat gcgctgcccg
      361 cgccaggtca cggccagggc ctcgggacgc aggcgggtgc cctggcaggc cgagcaggtg
      421 gcgctgcgca cgaaacggag gatggagtcg ttccgcttgc cgcggaggat ctcctccatg
      481 accggcacaa gcccgcggta gaagccctcc tggcgcggcc gcgcggtgat gcccgtccac
      541 ttgagccggg attcgagggg gtgcttgccg taggggacct tcaggcggtc cgagccgtgg
      601 agcaccacgc ggcgcgcctc gtcgcccagg ttccgccagg ggatgtccac cgatccgccg
      661 tgggcccgga gcacctcatc cagcaccggc agggtcacct gggaatacat caggtagccg
      721 ttcggcgtgc tcaccttcag cgccccttct cgcagcgtct ttgagggatc cgccaccagc
      781 aggtcgaggt cgaggcggtc ctccaggccg aggccctggc agtgggggca ggcgccctcc
      841 tcgccattga acgagaagag cccgcgggtg ggccggatgc cgccgggggc ggcgcccagg
      901 cgggcgaaga ggagccggag gagatcccag ccctcggtga gggtgcccac ggtggaccgg
      961 ggactgggcg ggccggagcg ctggccgatg gcgagggcgg ggcccatgcc ctcgaacgcg
     1021 cgcaccgccg gccgggcgaa gccgcccgcg tacctgcggg cgaaggcggg cagcgcctcg
     1081 aggaaccggc gctgtccttc ccggaacatg gtgtcgaagg ccagggacga cttgccggaa
     1141 ccggagacgc cggtgatcac ggtcaggctg cgccgcggga tccggacgtc gaatcccttc
     1201 aggttgtggg tctccacgcc gcggaggacg atctgctggt cttgccgttc caccaaggac
     1261 gattccttcc gcctgctgac accggcgggc aggcctctac cagggtagcc gtcgcgcagg
     1321 cggattcagg cgcgtccggc cgaatgatca ggcgcgtcca cgcttgccca tcctggagtc
     1381 gaggtaccag atggcgccgc cctggtcgcc cacggcgtgg aggtggtcca cgatctcgcc
     1441 gacccgggcc tcctcttcga cctgctccgt cacgtaccac tgcagggcga tctcgctggc
     1501 gtgatcctgc tcctggcggg cctgctggaa cagggcgttg atcttccccg tgatggcctt
     1561 ctcatgggcg aggatggcct cgaagacctg gatcacgccg ccgaagtcgg tggggggcgc
     1621 cgccagggcc tggagctcca ggcggccgcc gcggtcgagg atgaagtcca tgaggcggat
     1681 ggcgtgggcg gtctcttcgg tggcctgcac cttcagccaa tgcgcgaaac ccttgaagct
     1741 ctttccggtg cagtgggcgc ccatggccag gtagagctgg gccgagtact gttccaggtt
     1801 gatctgcgcg ttcagcgcgg cctgcatggt cttgctgatc atggcgcctc cttgagggtg
     1861 gggtggaagt ctagcccttt ccggcccggg gcgggtcggc atcttgcgtc tcattcagga
     1921 tcgatcgccg ttcaggaggc cggtcaccac agccgcccga ggcgccacac gagacctgcg
     1981 ttgagggaaa accgcggcgc tccagcggtg agccccgcct cgacgccgag gtccacgcag
     2041 agatccggcg cgaggtcccg gctgagggcg aggatggtgc tcacggcccg tccgttcagc
     2101 tcggtggcgg ccagggcgta ggtgtccagg gtcagattcc agcagggggc cacggcgcag
     2161 gtcaccgaaa gggatgtcgc cgcctggcgc acccggcccg cgtctctcgg ccgcccgatc
     2221 cagttggccc cggcgttcag atccacggcc cagcggccct tcgtgcagga ggccgtcagc
     2281 aggagggtgt cgtcgtggcg gcccgtgccg atgtgccgcg ccacgctggc ccggggcacc
     2341 ttgtgccagt aggccaggcc caggtccagc ccggcctgtt cctggcggag gaacagcgcc
     2401 tggccgccga cgaccggatc gccgttgcct tcctgcagct ctccctggga atccttgcgc
     2461 agggtgggac cgctccagcc gaagcgcacg tcgaaccagg ggcagaggcc caggttcagc
     2521 tgcgtgggca tgtagcggtc ctccgagtgg tcgcggttgc ggatgatctg ggcgccgagt
     2581 tcgagctcga ggacgccggg ctccgccagc cccgccgagg tgctgaacag gggccggcag
     2641 gccctggggg tgcaggcgtc cgtcgccgtc tcctggcaga cgaggggcag gcaggcggtc
     2701 agcgcggaca gggcgaggcc aaggtgtcgc aagggacgac tccagcgggt tcaggtcggg
     2761 ggaggaaagg gccgggaggg atctcacaga tgagatcgag tcttaatatt tcactcgatc
     2821 catccccaaa caagacccac gggccatgaa tgtgatggtc atcaccctac taaagctggg
     2881 cgttcagtcc cggtcagaat ccacgcgggt ccagacgccg gagcgcaggg ccacgagcca
     2941 ggccgacacg ggcaggcctt cacggccctg gagggccgcc gcgtagcggg cgagctgggc
     3001 ccggtagccg gccaggtcct ggtcgctgaa ggtcctggag tgcttgaagt ccagcaggtg
     3061 gatgcggtcg tcctcccaca ccacgagatc ggcccggccc agggcgccgc tggccgcggc
     3121 gcccgccagc ggcagctcgg tgcggcggcg ccggtggcgc cagccccggg cttcgaactg
     3181 ctccaggaag cgcagggcgt gctcgcgggc ctgggccacg gcgggcgggg cgtcgaggca
     3241 ggcctggaag gccgccgcat catcccagcg cacgaggagg tcccgcagga aggcgtgcat
     3301 ggcctccccc tccagccggg cgcggccgcg ggta
//
LOCUS       DATGWW010000721         1651 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_223677, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000721 DATGWW010000000
VERSION     DATGWW010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223677"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1651)
                     /gene="ispG"
                     /locus_tag="VK150_10445"
     CDS             complement(<1..>1651)
                     /gene="ispG"
                     /locus_tag="VK150_10445"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: protein motif:HMM:NF016438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate
                     synthase"
                     /protein_id="HLP31772.1"
                     /translation="LPVKVGNRIIGGDAPILVQSMTTTNTKDVDATVFQTLELAKAGC
                     ELVRITAPTQKDAEALKDIVAKVRAAGCDVPISADIHFQPRAAMEAVKWVDKVRINPG
                     NFVDSKSPTTRLYDEAAFESGAQRVYDAFAPLVRLAKDRGVALRIGTNHGSLSDRIMW
                     KYGDTIEGMVESALEYVRVCEAEDFDQVVFSMKSSNPRVVVEAYRLLAARLDRDHKPY
                     PFHVGVTEAGDGEDGRLKSSVGIGALLLDGLGDTLRVSLTEDPVHEIPVAKALVALCD
                     TARLEAVPRLPEAIDYYAFKRRDVLATCLGGLSVGGREKLAVGIADPGPETLPKGDRR
                     VEWLTTRDSHVTRPELPTLWHPHDVEFALATGHPMVSLASSHVLGGKSDLPTHLEIQV
                     EEPAHLDRLPPEVFEQPQLLWSCALSAAPDWNPVARYRHLAAWLARKGRKDAIILRGG
                     TDGSPEANMLLAARFGSLLVDGIGDLVHVEGQVSARTCMHLAYDILQAAGVRKTKPEY
                     VACPSCGRTLFDLQTTTQRIRAQTGHLKGVKIAIMGCIVNGP"
BASE COUNT          272 a          527 c          586 g          266 t
ORIGIN      
        1 gggccgttca cgatgcagcc catgatggcg atcttcacgc ccttgaggtg gccggtctgg
       61 gcccggatgc gctgggtggt ggtctggagg tcgaagaggg tgcggccgca actggggcag
      121 gccacgtatt ccggtttggt cttgcgcacc ccggcggcct ggaggatgtc ataagccaag
      181 tgcatgcagg tccgggcgga aacctgtccc tccacgtgga ccagatcgcc gatgccgtcc
      241 accagcaggg atccgaagcg cgccgcgagc agcatgttgg cctcggggct gccgtcggtg
      301 ccgccgcgca ggatgatggc atccttgcgg cccttgcggg ccagccaggc ggccagatgc
      361 cggtagcgcg ccaccgggtt ccagtccggc gccgccgaga gggcgcagga ccagagaagc
      421 tggggctgct cgaagacctc cggcggcagg cgatcgaggt gggccggttc ctccacctgg
      481 atttccaggt gggtcggcag atcgctcttc ccgccgagga catgggagct ggccagggac
      541 accatggggt gaccggtggc caaggcgaac tcgacgtcat ggggatgcca cagggtaggc
      601 agctcgggcc gggtcacatg ggagtcacgg gtggtgagcc attccacgcg acgatcgccc
      661 ttgggcaggg tctccgggcc ggggtcggcg atgccgacag cgagcttctc ccggccgccc
      721 acggagaggc cgcccaggca agtagcgagc acgtcgcggc gcttaaaggc gtagtagtcg
      781 atggcctcgg gaagccgcgg aaccgcctcc aggcgggccg tatcgcacag ggccaccagg
      841 gccttggcca ccgggatctc gtgcacggga tcctcggtga gggacacgcg aagggtgtcg
      901 ccgagaccgt cgagcaaaag ggccccgatg cccaccgagg acttgaggcg gccgtcctcg
      961 ccgtcgccgg cctcggtcac gcccacgtgg aagggatagg gcttatggtc ccgatcgaga
     1021 cgcgcggcca ggaggcgata ggcctccacc accacccgcg ggttggaaga cttcatgctg
     1081 aagacgacct ggtcgaaatc ctccgcctcg cagacgcgga catactcgag ggcgctctcc
     1141 accatgccct ctatggtatc gccgtacttc cacatgatgc ggtcggatag ggaaccgtga
     1201 ttggtaccga tgcgcagggc cacgccgcga tccttggcta ggcgcaccag gggcgcgaag
     1261 gcgtcgtaca ccctttgcgc acccgattcg aaggcagctt cgtcgtagag gcgcgtcgtc
     1321 ggcgacttgg agtccacgaa attgcccggg ttgatgcgca ccttatccac ccatttcacc
     1381 gcctccatgg cggcgcgggg ctggaagtgg atgtccgccg agatcgggac gtcgcagccc
     1441 gcggcccgca ccttggcgac aatatccttc aaggcttccg cgtccttctg ggtgggcgcc
     1501 gtgatgcgca ccagctcgca accggccttg gccagctcca gggtctggaa cacggtggcg
     1561 tccacatcct tggtattggt ggtcgtcatg gactggacca ggatgggcgc gtcgccgccg
     1621 atgatccggt tgccgacctt caccggaagg g
//
LOCUS       DATGWW010000722         1871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_224178, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000722 DATGWW010000000
VERSION     DATGWW010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224178"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..384)
                     /gene="tpx"
                     /locus_tag="VK150_10450"
     CDS             complement(<1..384)
                     /gene="tpx"
                     /locus_tag="VK150_10450"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF001808.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0016684 - oxidoreductase activity, acting
                     on peroxide as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HLP31773.1"
                     /translation="MAIVTLNGNPIHTCGELPLPGQPTPPFTLTRPDLSEVTSVDLEG
                     QRVVLSIFPSLDTDICAKSMRVFNALTEDLTDTVLLCVSMDLPFAQGLFCGAQGLSRA
                     RPASAFRHAEFGTAFGVTLLDGPMRG"
     gene            540..1625
                     /locus_tag="VK150_10455"
     CDS             540..1625
                     /locus_tag="VK150_10455"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HLP31774.1"
                     /translation="MESLRPRWGWYWGIWVLLGLYMATWDLAMYPSASIPQLLLINLL
                     QNGTWGLLGLFLVWLANRRPIESFAWSQWRTWCMHLLASVLVAALGLFLAYLISLYFG
                     SREWKEPLSLDMFRKGLPRFYRAYFHTNLLFMWAVVAAFHGLRIYRKYKAREVEAARL
                     ETRFAEAQNLALRMQLQPHFLFNTLNSISALVHANPDGADEMISRLGDFLRTTLDAPP
                     DQMVPLRRELAFIQDYLAIEQIRFQDRLRVVSDIPADLMSLPVPSFILQPLVENALKH
                     GLADRPQGGTLRLRARRDSDHLVLEVQDDGEGYLPGREGVGLANVRSRLGLLYKGRHQ
                     LDILGLPGRGTLVSLRLPVNPDVEAGS"
     gene            1622..>1871
                     /locus_tag="VK150_10460"
     CDS             1622..>1871
                     /locus_tag="VK150_10460"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP31775.1"
                     /translation="MKLRALVVDDEALARQRIRDLLRRSGDIEVAGECVNGLEAVRAI
                     EELAPDLVFLDIQMPELDGFGVVEALGAERMPPTLFITA"
BASE COUNT          288 a          624 c          628 g          331 t
ORIGIN      
        1 gccgcgcatg ggaccatcca gaagggtcac gccgaaggcg gtgccgaatt cggcatggcg
       61 gaaggccgag gcgggcctgg cgcgggagag gccttgcgcg ccgcagaaga gcccctgggc
      121 gaagggcagg tccatggaga cgcacagcag caccgtgtcg gtgaggtctt cggtgagggc
      181 attgaagacc cgcatgctct tggcgcagat gtccgtgtcc aggctcggga agatgctgag
      241 caccacccgc tggccctcga ggtccacgct ggtgacctcg ctgaggtccg gacgggtcag
      301 ggtgaagggg ggcgtcggct ggcctgggag gggcagctcg ccgcaggtgt ggatggggtt
      361 tccgttgagg gtgacgatgg ccatgggaac ctcccggggg gcatcctact cccttccgcc
      421 aggaccgcat ctccattcct gacccgacga tccgttcgac ccggacggtc gccccgtgaa
      481 accctcgtct cgccccagga tggctggtgg gatcctcctc tcgcgactag gcttgtgcca
      541 tggaaagcct gcgtccgagg tggggctggt actggggcat ctgggtcctg ctgggcctct
      601 acatggcgac ctgggacctg gcgatgtacc cctcggcgtc cattccccag ctgctgctca
      661 tcaacctctt gcagaacgga acctggggcc tgctggggct cttcctggtc tggctggcga
      721 accggcggcc catcgaatcc ttcgcctggt cccagtggcg gacgtggtgc atgcacctct
      781 tggccagcgt gctggtggcc gccctcgggc tcttcctggc ctacctgatc tcgctctact
      841 tcggttcccg ggagtggaag gaacccctga gcctggacat gttccgcaaa ggcctgccgc
      901 ggttctaccg ggcctacttc cacaccaacc ttctgttcat gtgggcggtg gtggcggcct
      961 tccacggcct gcggatctac cggaagtaca aggcccggga ggtggaggcc gcccgcctgg
     1021 aaaccaggtt cgccgaggcg cagaacctgg ccctgcgcat gcagctgcag ccccacttcc
     1081 tgttcaacac gctgaattcc atctccgcac tggtgcacgc caatccggac ggcgccgacg
     1141 agatgatcag ccgcctcggg gatttcctcc gcaccacgct cgacgccccc cccgaccaga
     1201 tggtgcccct ccggcgggaa ctcgccttca tccaggacta cctggccatc gagcagatcc
     1261 gcttccagga tcgacttcgc gtggtgtcgg acattccggc cgacctcatg agcctgccgg
     1321 tccccagctt catcctccag cctctggtgg agaacgccct caagcatggg ctcgccgatc
     1381 gaccgcaggg cgggaccctc cgcctccggg cgcggcgcga ttccgaccac ctggtgctgg
     1441 aagtgcagga tgacggggag ggatacctcc cgggacggga aggcgtgggg ctggccaacg
     1501 tgcgttcccg cctgggcctg ctctacaagg ggcggcacca gctggatatc ctgggcctgc
     1561 ctggacgcgg caccctcgtg tccttgcgcc tgcccgtcaa ccccgatgtg gaggctggat
     1621 cgtgaagctg cgcgccctgg tggtcgatga cgaagccctg gcccgccagc gcatccgtga
     1681 tctcctgcgc cgatccggcg acatcgaagt ggccggagaa tgcgtcaacg gactcgaggc
     1741 ggtgagggcc atcgaagaac tggcgccgga cctggtgttc ctggacatcc agatgcctga
     1801 actggatggc ttcggcgtgg tggaagccct gggcgcagag cgaatgccgc ccacgctgtt
     1861 catcacggcc t
//
LOCUS       DATGWW010000723         3095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_169941, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000723 DATGWW010000000
VERSION     DATGWW010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3095
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169941"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..717
                     /locus_tag="VK150_10465"
     CDS             <1..717
                     /locus_tag="VK150_10465"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: protein motif:HMM:NF001453.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HLP31776.1"
                     /translation="VPMRAHLGVALMLTLGGCDPGPAQSAPSDAELAAARVAMVREQI
                     VARGVTDTRVLAAMTRVPRHEFIPAGQRSSAYVDGPLPIGHGQTISQPFVVAFMTACL
                     DPKPGDRVLEIGTGSGYQAAVLSGLVAEVYSIEVVEPLARRAKADLKRLGYQNVTVRA
                     GDGYLGWPEAAPFDAIIVTCAPDQVPQALVQQLKPGGRMIVPVGPQHGVQELILLRRT
                     PKGLDTQAVLPVRFVPMVGG"
     gene            996..2180
                     /locus_tag="VK150_10470"
     CDS             996..2180
                     /locus_tag="VK150_10470"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding domain-containing
                     protein"
                     /protein_id="HLP31777.1"
                     /translation="MKLSTVAVIRLHNQQITRRRFLNPADVVASMGAMQGQDHHGSKW
                     AIGLRMLRGQDFVIDQAIADRTLVRTYLMRGKLHVATAKDSRWLLSLTAPRMIAASDR
                     RERQLDLDEGVFARVRRIFSLALEGGRQLTRSELYALLEEARISSKGQRGHHILWRMA
                     MEGLICFASPEGIQQTFALSDEWIPEGVRRSREQALADLALRYFSSRGPATLQDFLWW
                     SGLTSAEATAALDMVKPKLVAANLGGQCFWMSTSTQIPPSGGEDVYLLPSFDEFLLGY
                     QNRNATLESRYAAVLSPGGDGTFLPAVVIQGSVVGTWSRILRNGALEIRATTFRSLTS
                     KESSLLREAAHRYGEFMRMEVDLLEEATLPPGDLARSATRLQVPWERSATEPRRPLEK
                     LG"
BASE COUNT          491 a          970 c         1044 g          590 t
ORIGIN      
        1 gtacccatgc gagcgcatct gggagtggcc ttgatgctga ccttgggggg ctgcgacccc
       61 ggacctgccc aatccgcccc gtccgacgcg gagctggctg ctgcccgggt ggccatggtg
      121 cgggagcaga tcgtcgcgcg cggcgtcacg gacacccggg tgctcgccgc catgacccgg
      181 gtgccccggc acgaattcat cccggccggc cagcggtcct cggcgtacgt ggacggcccc
      241 ctgcccatcg gccacgggca gaccatctcc cagcccttcg tggtggcctt catgaccgcc
      301 tgcctggacc ccaagcccgg tgatcgcgtg ctggagatcg gcaccgggtc gggataccag
      361 gcggccgtgc tgtcgggcct ggtggcggag gtctacagca tcgaggtcgt cgagcccctg
      421 gctcggcggg ccaaggccga cctgaagcgg cttggctacc agaacgtgac ggtgcgggcc
      481 ggcgatggct acctgggctg gccggaggcg gcccccttcg acgccatcat cgtcacctgc
      541 gccccggacc aggtgcccca ggccctcgtc cagcagctga aacccggcgg ccggatgatc
      601 gtgcccgtgg ggcctcagca tggcgtccag gaactgatcc tgcttcggag gactccgaag
      661 ggcctggaca cgcaagccgt gctgcccgtg cggttcgtac cgatggtggg gggctgacca
      721 ggtgcgtggc tccggtcaag acatcttgca tttcataacg gttcgccacc ggccttccag
      781 acctcgccac cttgatctga cgttcgcacc cattgtctcc acaggcatga gccgggccgg
      841 acacttgccc tgcccatgca gagaaaggcc atccatccgg gtcagtccgg tgcgtttgta
      901 ttcatgaaaa tgcatatgca tctgatttga ggcggcggga cgatctgcga cttccaatcg
      961 gctcggcggg cagagtcacc cgtctgagga ctgccatgaa attgtccacc gtcgcggtca
     1021 tccggttgca caaccagcag atcacccgac gccggttctt gaacccagcg gacgtggtgg
     1081 cttccatggg ggccatgcag gggcaggacc accacggttc gaaatgggcc atcggcctcc
     1141 ggatgctccg cggccaggat ttcgtgatcg accaggccat cgccgaccgg acgcttgtgc
     1201 ggacgtacct gatgcgcggc aagctgcatg tggccaccgc gaaggattcc cggtggctgc
     1261 tgtcattgac cgcacccagg atgatcgccg ccagcgaccg gcgggaacgg cagctcgacc
     1321 tggatgaagg ggtgttcgcc cgggtccgcc ggatcttcag cctcgccctg gaaggtgggc
     1381 ggcagctgac gcgaagcgaa ctgtacgccc ttctcgagga ggcgaggatc tcctcgaagg
     1441 ggcagcgggg ccaccacatc ctgtggcgca tggccatgga aggcctcatc tgcttcgctt
     1501 ctccggaagg catccaacag accttcgccc tctcggacga gtggattccc gagggcgtcc
     1561 gcagaagcag ggagcaggcc ctggcggact tggccctgcg ctatttttca agccgggggc
     1621 cagccaccct gcaggacttc ctgtggtggt ctgggctgac gtccgccgaa gccaccgccg
     1681 ccctggacat ggtcaaaccg aagctggtgg ccgcgaacct gggcggacag tgtttctgga
     1741 tgtcgacttc cacccagatc cctccctcag gtggcgagga tgtgtacctg ctgcccagct
     1801 tcgacgagtt cctgctgggt tatcagaacc gaaacgcgac gctcgaatcg aggtacgccg
     1861 ctgtgctgag ccctggtggg gatgggacct tcctcccggc tgtcgtgatt caggggagcg
     1921 tggtgggtac ttggagccgc atactcagga acggggccct tgagatccgg gccaccacgt
     1981 tcaggtcctt gacttcgaag gaatcctccc tgttgcgaga ggccgcgcat cgctacggag
     2041 agttcatgag gatggaggtc gacctgctcg aggaagccac gttgcctccg ggcgacctgg
     2101 cgagatcggc cacccgtctc caggtgccct gggaacggtc cgccactgaa cctcgaaggc
     2161 ccttggaaaa actgggatag ttcggggcgt ggcctgccgg ccatgccgcc cgggagggac
     2221 agcatgttcg gacgcggggt actggctttc ctgatgtgtc ccggcatggt ggcctacggc
     2281 ctcccttctg tatggatccg tccgtcaccc ttgcggggat ttccatttca gattctcggc
     2341 ggggtggccg ctgccgttgg ttccggattg ctgctgtggt gtgcccggga ttttctcgtg
     2401 gtggggcagg ggaccctggc gccttgggct ccccctcaga gtttggtgcg ggtcggattg
     2461 taccgggtgt cgcgtaatcc catgtacctc gccgtgagcc tggtgctgtg cggctggacg
     2521 gcctgcttcc aatcgaggag cctcatgctc tactccgtgt ccatgatggt tgtcttccac
     2581 cttcgggttg tattcgggga ggagccctgg ctggcgcgga ggtatggtga ggaatggcgg
     2641 gcctactgtg cgagggttcc gcggtggttg atttgaatcc cgacttgagc gggccttccg
     2701 cagagcacac cttgcgcgga cccagccagg ttgaactgcg acgtggattt ctatagtgtg
     2761 acggcaggag ttcacccatt gtccatccaa ggtccagtcc gtttgccctg ccactgcgcc
     2821 tcgctccgac aggcggcgcg ggccatcacg cagctgtatg atggcgagct tcgtccggtg
     2881 gggttgacct cgacgcaata caacctgctc gaagccattc aattcgcgcc cgaggcaaga
     2941 acgagtgacg tggccagggc cttggcgatg gattccacga ccgtgacccg ctccctgaag
     3001 ttgctggaag tggccggatg gatccagttc cagggtgggg tggatctgcg cgagaagcgt
     3061 tggaacctga cccggaaggg gcgggggaag ctgga
//
LOCUS       DATGWW010000724         1587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_225145, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000724 DATGWW010000000
VERSION     DATGWW010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225145"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..803
                     /locus_tag="VK150_10475"
     CDS             <1..803
                     /locus_tag="VK150_10475"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HLP31778.1"
                     /translation="TTLAEAREPGRTTVAGHKTRVALLSYMRYWTAKYRSRDAHAPSL
                     ATIDPAVILAVREGKVEKVEGPLEADVQAMEDDILLARRKSDLLLVALHNHDVTHHRA
                     HGIQDTTPPNDQIMFHRAIEAGADLVIGTGPHVLRGIEIHQGRPIFYSLGDFIYQYRT
                     PDKIPADLIHQRDGEMPRPTNVSVWDRRDSREVMESVMVRMTLNQGKLKRIQLLPVTI
                     DDEGPLFGVPRLAGTGRATEIIALMQKLSAPYGTTIVSKGWYAEVVLP"
     gene            complement(887..>1587)
                     /locus_tag="VK150_10480"
     CDS             complement(887..>1587)
                     /locus_tag="VK150_10480"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HLP31779.1"
                     /translation="TRGFNVLAKVEGSDPALKDEVILIGAHMDHLGLPGGILHPGADD
                     NASGVSALLEIARVLAAAPIRPRRTIAIAFWTGEEEGKFGSGHYTRHPRWPLAKTRAY
                     LNLDMIGHPWTRAELSALAADLGQKGALDGVDPARFAEPGPAAGHRDLGPVLVRAGAG
                     TAMALHLDWTDGRHGGSDYRDFARRDVPFVRFFGSYFPGYHTPADTLDQLDPAQVRRM
                     ARLVLASAWLLADR"
BASE COUNT          271 a          531 c          558 g          227 t
ORIGIN      
        1 gcaccaccct ggcggaggcc cgggagccgg gccggaccac cgtggccggc cacaagaccc
       61 gagtcgccct gctttcctac atgcgctact ggacggccaa gtaccgcagc agggatgcgc
      121 atgcgccgtc cctggcgacc attgatcctg cggtgatcct ggccgtccgg gagggcaagg
      181 tcgagaaggt ggagggcccg ctggaagctg acgtgcaggc catggaagac gacatcctcc
      241 tcgcccggcg gaaatcggac ctgctgctgg tggcattgca caatcacgac gtgacccacc
      301 accgggccca tggcatccag gacaccacgc cgcccaacga ccagatcatg ttccaccggg
      361 ccatcgaggc gggcgccgac ctggtgatcg gcacgggtcc ccacgtgctg cgcggcatcg
      421 agatccacca gggccgaccc atcttctaca gcctgggcga tttcatttac cagtaccgca
      481 cgcccgacaa gatccccgcc gacctcatcc accagcggga cggcgagatg ccccggccca
      541 ccaatgtctc ggtctgggac cgccgggatt cccgcgaggt gatggaatcg gtgatggtcc
      601 gcatgaccct caaccagggg aagctgaagc gcatccagct gctgcccgtc accatcgacg
      661 acgagggccc gctcttcggc gtgccgcgcc tcgcgggcac cggccgcgcc accgagatca
      721 tcgccctgat gcagaagctc tcggcgccct acggcacgac gatcgtcagc aaggggtggt
      781 acgcggaagt ggtgcttccc taattcgccc atctaaaaaa aagcaccacc aagacaccag
      841 attcgtaagt gtcttggtgg tgaaagttgt tgctgaatgg ccagggtcag cgatccgcca
      901 gcagccaggc cgaggccagc accaggcggg ccatgcggcg cacctgggcg gggtccagct
      961 gatccagggt gtcggcgggg gtgtggtagc ccgggaagta gctgccgaag aagcgcacga
     1021 agggcacgtc gcgccgggcg aagtctcggt agtcgctgcc gccgtgccga ccgtcggtcc
     1081 agtccaggtg cagggccatg gccgtgccgg cgcccgcccg cacgaggacg gggccgaggt
     1141 cccggtggcc ggcggcggga ccgggttccg cgaaacgggc cgggtccacg ccatcgagcg
     1201 cacccttctg ccccaggtcg gcggcgaggg cgctgagctc ggcgcgggtc caggggtggc
     1261 cgatcatgtc gaggttcagg taggcccggg tcttggccag gggccaacgg ggatggcggg
     1321 tgtagtggcc ggagccgaac ttgccctcct cctctccggt ccagaaggcg atggcgatcg
     1381 tccggcgggg ccggatgggc gcggccgcga ggacacgggc gatctccagc agggcagaca
     1441 cgcccgaggc gttgtcgtcc gcgccgggat ggaggatgcc tcccggcagg ccgaggtggt
     1501 ccatgtgggc gccgatgagg atgacctcat ccttcagtgc gggatccgag ccttcgacct
     1561 tcgccaggac gttgaacccg cgggtgg
//
LOCUS       DATGWW010000725         3030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_170198, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000725 DATGWW010000000
VERSION     DATGWW010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170198"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(166..864)
                     /locus_tag="VK150_10485"
     CDS             complement(166..864)
                     /locus_tag="VK150_10485"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLP31780.1"
                     /translation="MDLIWEGLRKALELLLTLDPEVLRVTLLSLQISGAATLVSLVIG
                     LSVALVVALNDFPGRRLVIALLNTGMGLPPVVVGLFVTVLLWRSGPLGFLGILYTPSA
                     MVLAQAAIASPIIAGIGLAALQQLPPGLRLQILALGASRPQMVWLLLKEARLPLLAAV
                     MAGFGGVISEVGASIMVGGNIKGQTRVLTTATVMETGRGNFDIAIALSLILLVLAFSV
                     NAVLTHLQQRSRRS"
     gene            complement(872..2503)
                     /gene="pruA"
                     /locus_tag="VK150_10490"
     CDS             complement(872..2503)
                     /gene="pruA"
                     /locus_tag="VK150_10490"
                     /EC_number="1.2.1.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR01236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006562 - proline catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamate gamma-semialdehyde dehydrogenase"
                     /protein_id="HLP31781.1"
                     /translation="MSNAIFSLPESHNEPILSYAVGSKERALLKAELDRQYHQEIEIP
                     LIIGGREVRTGKTQKAVCPHDHQHVLAHYHEAGEAEVRMAIDAAMAAKKAWEATPWED
                     RAAIFHKMASLISSKYRYILNAATMLNQSKSAYQAEIDSTCETADFFRFNAKFLERIY
                     QQQPISDPHVWNRVHYRALEGFVFAVTPFNFTAIGANLATAPAIMGNTVVWKPASTSI
                     LSNYYLMQLYKEAGLPDGVINFVPGRGSMIGKVALEDRNFAGLHFTGSTGVFNSMWKT
                     IAGNLERYRSYPRIVGETGGKDYIFMHASGEAPEVAAAIVRAGFEYQGQKCSACSRVY
                     VPASRWAEVKERLLALLAEVKMGDVRDFRNFFNAVIDEAAFDNTMKYIELARSAKDAE
                     ILSGGKGDKSVGYFIEPTVILTTNPKFVTMEEEIFAPVVTLYVYDDAKLDETLRLLDE
                     TSPYALTGAIFARDRYVINHLTEVLANTAGNFYINDKPTGAVVGHQPFGGSRASGTND
                     KAGSFLNLIRWTSPRTIKESFTPPADIKFPFLEEA"
     gene            complement(2509..>3030)
                     /locus_tag="VK150_10495"
     CDS             complement(2509..>3030)
                     /locus_tag="VK150_10495"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HLP31782.1"
                     /translation="RRVRARVHPAALARHTAMESFQRIAATKSLFLTRGDNSGTHAQE
                     LKLWKAAGITPEGLPWYQQTGQGMGQTLGIAAEKKAYTLSDRGTYLALRKKLGMAILH
                     EGDPSLRNVYHVIEVNPARFPKVNTAGGRAFADFMVSKAVQKRIKEFGIGTYGSPLFF
                     PDADVPEPDAGRR"
BASE COUNT          482 a          897 c         1121 g          530 t
ORIGIN      
        1 gcagcaggcc ggccagcgcc agcatgaggg tgctcttccc ggcgccgttg gggcccatga
       61 gggcgaacac ctcgctggcg cggaggtcga gggcgggcac gtccagaacc tgggcgccgg
      121 cgcgatggac ggtgaggccg cgggcctgga ggagggtcgt ccgggtcatg accgccggct
      181 ccgctgctgg agatgggtga gcaccgcgtt cacggaaaag gcaagcacca gcaggatgag
      241 gctcagggcg atggcgatgt caaagttgcc gcggccggtt tccatcaccg tggcggtggt
      301 gagcacccgg gtctggccct tgatgttgcc acccaccatg atcgaggcgc ccacttcgga
      361 gatcaccccg ccgaagcctg ccatcacggc ggccagcagg ggcaggcggg cctccttcag
      421 cagcagccac accatctggg gccgggaggc gcccagggcc aggatctgaa gccgcaggcc
      481 cggtggaagc tgctgcaggg ccgcgaggcc gatgcccgcg atgatgggcg aggcgatggc
      541 ggcctgggcc agcaccatgg ccgaaggcgt gtagaggatg ccgagaaagc ccaggggccc
      601 gctccgccag agcagcacgg tcacgaagag gcccacgacc acgggcggca ggcccatgcc
      661 cgtgttcagc agggcgatga ccagccgccg gcccgggaaa tcgttcagcg ccacgacgag
      721 ggccaccgag aggccgatca cgaggctgac gagggtggcc gcgcccgaga tctggagaga
      781 gagcagggtg acccggagga cctcaggatc cagcgtgagc agcagctcca gcgctttccg
      841 gaggccctcc cagatcagat ccatggcgcc cctacgcttc ttccaggaag gggaacttga
      901 tgtccgcggg cggggtgaag ctctccttga tggtgcgcgg cgaggtccag cggatcaggt
      961 tcaggaagct gccggccttg tcgttggtgc ccgaggcgcg ggagccgccg aagggctggt
     1021 ggcccaccac ggcgcccgtg ggcttgtcgt tgatgtagaa gttccccgcg gtgttggcga
     1081 gcacctcggt gaggtggttg atgacgtagc ggtcgcgggc gaagatggcg ccggtgaggg
     1141 cgtagggcga ggtctcgtcc aggagccgca gggtctcgtc cagcttcgcg tcgtcgtaga
     1201 cgtagagggt gaccaccggc gcgaagatct cctcctccat ggtcacgaac ttggggttcg
     1261 tggtgaggat caccgtgggc tcgatgaagt agcccacgga cttgtcgccc ttgccgccgg
     1321 agaggatctc cgcgtccttg gcggacctgg ccagctcgat gtacttcatg gtgttgtcga
     1381 aggcggcctc gtcgatgacg gcgttgaaga agttgcggaa gtcgcgcacg tcgcccatct
     1441 tcacttcggc gaggagggcc agcaggcgct ccttcacctc ggcccagcgc gaggcgggga
     1501 cgtagacccg cgagcaggcc gagcacttct ggccctggta ctcgaagccc gcgcggacga
     1561 tggcggcggc gacttccggg gcctcgcccg aggcgtgcat gaagatgtag tcctttccgc
     1621 cggtctcgcc cacgatgcgg gggtagctgc ggtagcgctc gaggttgccg gcgatggtct
     1681 tccacatgct gttgaagacg ccggtggatc cggtgaagtg gaggcccgcg aagttgcggt
     1741 cctccagtgc caccttgccg atcatggagc cgcggccggg gacgaagttg atgaccccat
     1801 cagggagccc cgcctccttg tagagctgca tgaggtagta gttggacagg atggaggtgg
     1861 aggcgggctt ccacaccacg gtgttgccca tgatggcggg ggccgtggcc aggttggcgc
     1921 cgatggccgt gaagttgaaa ggcgtcacgg cgaagacgaa gccttcgagc gcgcggtagt
     1981 gcacccggtt ccacacgtgg ggatccgaga tgggctgctg ctggtagatg cgttccagga
     2041 acttggcgtt gaagcggaag aagtccgccg tctcgcaggt gctgtcgatc tccgcctggt
     2101 aggcgctctt cgactggttc agcatggtcg cggcgttcag gatgtagcgg tacttcgagg
     2161 agatgaggct ggccatcttg tggaagatgg cggcgcgatc ttcccagggg gtggcctccc
     2221 aggccttctt ggcggccatg gcggcgtcga ttgccatgcg cacttccgcc tcgccggcct
     2281 cgtggtagtg ggccagcacg tgctggtggt cgtgggggca gacggccttc tgggtcttgc
     2341 cggtgcgcac ctcgcggccg ccgatgatga gcgggatttc gatttcctgg tggtactgcc
     2401 ggtccagctc agccttcagg agcgcgcgtt ccttcgaccc gacggcatag ctcaggatgg
     2461 gctcgttgtg ggattcggga aggctgaaga tggcgttcga catgggctct acctccgtcc
     2521 ggcgtccggt tccgggacgt cggcatcagg gaagaatagc ggcgagccat aggttccgat
     2581 tccgaattct ttgatgcgct tctggacagc tttcgacacc atgaagtcag caaaggcgcg
     2641 ccctccggcc gtgttcacct tggggaaccg cgcggggttt acctcgatga cgtggtagac
     2701 attccggagg gagggatcgc cttcatgcag gatggccatc ccgagttttt tccgcagggc
     2761 caggtacgtg ccgcggtctg acagtgtgta agccttcttt tcggccgcga tgcccagggt
     2821 ctggcccatg ccctggccgg tctgctggta ccagggcagg ccttcggggg tgatgcccgc
     2881 ggccttccag agcttcagct cctgggcatg ggtgccggag ttgtcgccgc gggtgaggaa
     2941 gagcgatttc gtggcggcga tccgctggaa gctctccatg gcggtgtggc gggcgagcgc
     3001 agctgggtga acccgagccc gaacgcgccg
//
LOCUS       DATGWW010000726         1615 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_225574, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000726 DATGWW010000000
VERSION     DATGWW010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225574"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1615)
                     /locus_tag="VK150_10500"
     CDS             complement(<1..>1615)
                     /locus_tag="VK150_10500"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HLP31783.1"
                     /translation="PLLAQPKGQLVHWMPPCLRVRLDDAWEEALRDAERQRIEEGLAM
                     LRRGGVVCPDFEDRFQPGDPSKATLRLTEWQSEATVPLAAQPVREFQGRLSEFAEHLQ
                     DLSLSGHRVFLAGSTPGMRERFHDLLRDHELPQGHGTEAGCRAIHLGLSAGIHLKEPS
                     LLVFTEREVFGRKAIQAAPKKSRSAAFLSDLRDLKPGDRVVHLDHGIGEFVGFATLTV
                     GGEEQEVLQLRYADGGQLNVSLERADLLQRYTGAEGHLPPLDKLGGASWAKVKRRAKK
                     AIRDMADELLKLYAQRKLEKGHAYPPDGPDMAAFDASFAFTPTPDQIEAIEAVKADLE
                     SPRPMDRLLVGDVGFGKTEVAMRAAAKVALEGRQVAVLCPTTILCFQHFRTFKERFAG
                     FPIRIEMMNRFVDATDQKRILQELADGKIEIVVGTHQMLGAKVKFADLGLVVVDEEQR
                     FGVGHKEKLKKLRLNVDQLALSATPIPRTLHMSLTGLREISLIETPPKDRLAIETVVA
                     PWSDELVQTAIQFELRRGGQVYLVHNRVES"
BASE COUNT          228 a          554 c          556 g          277 t
ORIGIN      
        1 ggattccacc cggttgtgca ccaggtacac ctgcccgccg cggcgcagct cgaactggat
       61 ggcggtctgc accagctcgt cgctccaggg cgccaccacc gtctcgatgg ccagccggtc
      121 tttcggcggc gtctcgatga ggctgatctc ccgcagcccc gtgaggctca tgtgcagggt
      181 gcggggaatg ggcgtggccg acagcgccag ctggtccacg ttgaggcgca gtttcttgag
      241 cttttccttg tggcccacgc cgaagcgctg ttcctcgtcc acgaccacca gacccaggtc
      301 cgcgaacttc accttggcgc ccagcatctg gtgggtgccc accacgatct cgatcttgcc
      361 gtcggccagt tcctggagga tgcgcttctg gtcggtggca tccacgaagc ggttcatcat
      421 ctcgatgcgg atggggaatc ccgcgaagcg ctccttgaag gtcctgaagt gctggaagca
      481 gaggatggtc gtggggcaga gcaccgccac ctgccggcct tcgagggcca ccttggccgc
      541 ggcgcgcatg gccacttccg tcttgccgaa gcccacgtcc cccaccagca ggcggtccat
      601 gggtcgcggg gattccaggt cggccttcac cgcctcgatg gcctcgatct gatccggcgt
      661 gggcgtgaag gcgaagctgg cgtcgaaggc cgccatgtcg ggcccatccg gcgggtaggc
      721 gtggcctttc tccagcttgc gctgggcgta gagcttcagc agctcgtcgg ccatgtcgcg
      781 gatggccttc ttggctcggc gcttgacctt ggcccaggag gccccgccca gcttatccag
      841 gggcggcagg tggccctcgg cgccggtgta gcgttgcagc aggtccgccc gctccaggct
      901 cacgttgagc tggccgccgt cggcgtagcg cagctgcagc acctcctgct cttcgccgcc
      961 cacggtgagg gtggcgaagc ccacgaattc gccgatgccg tgatccaggt gcaccacgcg
     1021 gtcgccgggc ttgaggtcgc gcaggtcaga caggaaggcc gcgctgcggg atttcttcgg
     1081 cgcagcctgg atggccttcc ggccgaaaac ctcgcgctcc gtgaacacca gaagggaggg
     1141 ttctttcagg tggatgccgg cgctgaggcc caggtggatg gcgcggcagc ccgcctcggt
     1201 gccgtggccc tggggcagct cgtggtcccg cagcaggtcg tggaagcgct ccctcatgcc
     1261 cggtgtggag ccggccagga agacccggtg ccccgacagc gacaaatcct gcaggtgctc
     1321 ggcgaactcc gacagccggc cctggaattc tcgcaccggc tgggcggcca ggggcaccgt
     1381 ggcctcgctt tgccattccg tgagccgcag ggtggccttg ctgggatcgc ccggctggaa
     1441 gcgatcctcg aaatcagggc acaccacgcc gccccggcgc agcatggcca ggccctcctc
     1501 gatgcgctgc cgctcggcgt cgcgcagggc ctcttcccag gcatcatcca gccgcacgcg
     1561 caggcagggc ggcatccagt ggaccagctg gcccttgggc tgcgcgagca gggga
//
LOCUS       DATGWW010000727         2387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_170670, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000727 DATGWW010000000
VERSION     DATGWW010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170670"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..760)
                     /locus_tag="VK150_10505"
     CDS             complement(<1..760)
                     /locus_tag="VK150_10505"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HLP31784.1"
                     /translation="MYDAQRDACLAAAQAGGKVLLGFFRKLDPATITEKSKNDVVSEA
                     DRAAEAAIRAELDFRFPQYGFVGEEGGASGDAERRWIVDPLDGTLNFVQGFPHWCVSV
                     ALWDAEGPVVGCVLDPLRDDCFLAVRGLGATWNGRPMQVSRQPGLDGAFLATGFAFQL
                     GDRWPAFNAALGRVFPRAKGIRRAGSAALDLAHVACGIFDGYFELGLKPWDLAAGALL
                     VQEAGGVITDWEGNQGWFKTGNMVVGTRGVQPELL"
     gene            complement(763..2259)
                     /locus_tag="VK150_10510"
     CDS             complement(763..2259)
                     /locus_tag="VK150_10510"
                     /inference="COORDINATES: protein motif:HMM:NF022517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2867 domain-containing protein"
                     /protein_id="HLP31785.1"
                     /translation="MNAPAPQGASRMDPGRPLVLVTGATGYIGGRLVPRLLAAGRRVR
                     CLARNPERLAGRAWPGAERVQGDVSDPASLEAALAGVAQAYYLVHAMGEDRPDFRGRD
                     LRQALTFAEACAKAGVRRIIYLGGLGDPARHRSDHLASRQEVGAALGSTGVPVLEFRA
                     AVIVGSGSASFEMIRHLTERLPVMITPRWVNTRCQPIGVRDVLAYLTEALDHPDVAGI
                     FEIGGRDVLDYRRMMLGYAEARGLRRLILPMPVPLPGLSVLWVDLVTPIPLALAGPLV
                     EGMSTEVVVQDPRALEVFGVKPMGYREALALALQRLDEDAVETTWASSLAGAPEGREL
                     GSYEGLLLERHHRHVKAPPHVVFQTFCALGGESGWPAGNWLWQIRGWMDRAFRGVGMR
                     RGRRHPRQLRVGDPVDFWRVEALEPDRLLRLRAEMKVNGNAWLQFSVWPEGSGSRLEQ
                     TAFFEPLGLLGLLYWYSVLPFHIFVFPGMIRTLKQRAEAAVTESDRGR"
BASE COUNT          358 a          889 c          841 g          299 t
ORIGIN      
        1 ccagcagctc cggctgcacg ccgcgggtgc ccaccaccat gttgccggtc ttgaaccagc
       61 cctggtttcc ctcccagtca gtgatcacgc cgcccgcctc ctgcaccagc agggcgccgg
      121 cggcgaggtc ccagggcttc aggcccaact cgaagtagcc gtcgaagatg ccgcaggcca
      181 cgtgggccag atccagcgcg gcgctgccgg cgcggcggat gcccttggcg cgggggaaca
      241 cccggcccag ggcggcgttg aaggcgggcc agcggtcgcc cagctggaac gcgaaccccg
      301 tggccaggaa ggcgccgtcc aggcccggct gccgggacac ctgcatgggc ctgccgttcc
      361 aggtggcgcc caggccgcgg acggccagga agcagtcgtc gcgcaaggga tccagcacgc
      421 agcccaccac ggggccctcc gcgtcccaca gggccacgga cacgcaccag tgggggaagc
      481 cctggacgaa gttcaacgtg ccgtccaggg ggtcgacgat ccaacgccgc tcggcatccc
      541 ctgaggcgcc gccttcctcg ccgacaaagc cgtactgggg aaaccggaaa tccaactcgg
      601 cgcggatggc ggcctcggcg gcgcggtcgg cctcgctcac cacgtcgttc ttggatttct
      661 cggtgatggt ggcgggatcg agttttcgga agaagccgag gagcaccttg cccccggcct
      721 gggccgccgc caggcaggca tcccgttgcg cgtcgtacat ggtcaccgtc ctcggtctga
      781 ttctgtcacg gcggcttcgg cgcgctgctt cagggtgcgg atcatgccgg ggaagacgaa
      841 gatgtggaag ggcagcacgg agtaccagta gaggagcccc agcaggccca ggggctcgaa
      901 gaaggcggtc tgctccaggc gcgagcccga gccctcgggc cacacgctga actgcagcca
      961 ggcgttcccg ttcaccttca tctcggcccg caggcgcagc agacgatcgg gttcaagggc
     1021 ctccacccgc cagaaatcca cggggtcgcc cacgcggagc tgcctgggat ggcgccttcc
     1081 ccggcgcatg cccacgccgc ggaaggcgcg gtccatccag ccgcggatct gccacagcca
     1141 gtttccggcg ggccagccgc tttcgcctcc gagggcgcag aaggtctgga agacgacgtg
     1201 gggcggggcc ttcacgtggc ggtggtgccg ctccagcagc aggccttcgt acgaccccag
     1261 ctcccgtccc tccggcgcgc cggcgaggct cgaggcccag gtggtctcca cggcgtcctc
     1321 gtccaggcgc tgcagggcca gcgccagggc ctcgcggtag cccatgggct tcacgccgaa
     1381 cacctccagc gcacgcgggt cctgcaccac cacctcggtg ctcatgccct ccaccagggg
     1441 ccccgccagg gccaggggaa tgggcgtcac cagatccacc cacagcaccg agaggcccgg
     1501 cagcggcacg ggcatgggga ggatcaggcg ccgcagcccg cgggcctcgg cgtagcccag
     1561 catcatgcgc cggtagtcga gcacgtcccg gccgccgatc tcgaagatcc ccgccacgtc
     1621 cgggtgatcg agggcctcgg tgaggtaggc cagcacgtcg cgcacgccga tgggctggca
     1681 gcgcgtgttc acccagcgcg gggtgatcat caccggcagg cgctcggtca ggtggcggat
     1741 catctcgaag ctggcgctgc cgctgcccac gatcaccgcc gcccggaatt ccagcaccgg
     1801 cacgcccgtc gagccaaggg cggcgcccac ctcctggcgg ctggccagat ggtcgctccg
     1861 gtggcgcgcg ggatcgccca ggccgccaag gtagatgatc cgtcgcacgc ccgccttggc
     1921 gcaggcctcg gcgaaggtga gggcctggcg caggtcgcgg ccccggaaat ccgggcggtc
     1981 ctcccccatg gcgtgcacca ggtagtaggc ctgggcgacg cccgccaggg ccgcttcgag
     2041 ggaggcggga tcggagacat cgccctggac ccgctccgcg ccgggccagg cgcgtcctgc
     2101 caggcgctcc gggttgcgcg ccaggcaccg cacccgccgc cccgccgcca gcagccgcgg
     2161 cacgagtcgg ccgccgatgt accccgtggc cccggtcacc aggacgagcg gccggcccgg
     2221 atccatgcgg ctggcgccct ggggggctgg ggcgttcatg ccggcaccag gtccgcgaac
     2281 acgaagccgt cccgttccac cacctcgccg cgccgcacgg gcacggggcg ccggaacatc
     2341 ggtccgtccc aggcgaaggt gtggaactcg ccccgctcgc cgcaggg
//
LOCUS       DATGWW010000728         1785 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_226079, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000728 DATGWW010000000
VERSION     DATGWW010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1785
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226079"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1691)
                     /locus_tag="VK150_10515"
     CDS             complement(<1..1691)
                     /locus_tag="VK150_10515"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF017464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HLP31786.1"
                     /translation="MNLRSAWLALALVAPLAAETPAAAPRPILGVDPAYIHTAASPCR
                     DFYGYANGAFDQVAIPGEYASYGVNQEIDERNYAILKGILETSARTRGPEGSIPQRVG
                     DFYASGMDEARIEKEGFKPLAPAFAAIRALASPREVLVQMGRLRATGVQAGLGFSVQV
                     DDKDSSAMIASFNQGGLGLPERDYYLRPGKEAEAIRQAYVQHVARILVLAGDQPETAQ
                     ARAKGILALETKLAKASRTLVDLRDPQANYHKVARKDLRGLADLDWNGYFTAVGLPAG
                     ETHVLVGQPEFFKALAGLLKSEPLADWRVYLRWHVLKTAAPFLGSAFVNENFAFYGKT
                     LSGATELRPRWKRVLSAADRALGEDLGQLYVKTAFSPEAKARALEMVHFHKEAMRARI
                     LAADWMVEATKAQALRKLDTMRSKVGYPDRWRDYSGLKVSRRAFILNVQAASIFDFQR
                     RMAKLGKPVDRNEWHMTPQTNNAYYDPSMNEMCYPAGILQPPFFDEKADDASNYGALA
                     STIGHELTHGFDDQGRQYDWQGNLKDWWTAEDAKRFEVRASHIVKQYDAFEPLPGL"
BASE COUNT          244 a          552 c          684 g          305 t
ORIGIN      
        1 aggccgggca ggggctcgaa ggcgtcgtac tgcttcacga tgtgactggc gcggacctcg
       61 aagcgcttgg cgtcttcggc ggtccaccag tccttgaggt tgccctgcca gtcgtactgg
      121 cggccctggt cgtcgaagcc gtgggtcagc tcgtggccga tggtggaggc cagggcgccg
      181 tagttggagg cgtcgtcggc cttctcgtca aagaaaggcg gctggaggat gcccgccggg
      241 tagcacatct cgttcatgct ggggtcgtag taggcgttgt tggtctgggg cgtcatgtgc
      301 cactcgttgc ggtccacggg cttgccgagc ttggccatgc ggcgctggaa atcgaagatg
      361 gaggccgcct gcacgttgag gatgaaggcg cgccgggaga ccttcaggcc gctgtagtcc
      421 cgccagcggt ccgggtagcc caccttgctg cgcatggtgt cgagcttgcg cagagcctgg
      481 gccttggtgg cctccaccat ccagtcggcg gcgaggatgc gggcgcgcat ggcctccttg
      541 tggaagtgga ccatctccag ggcgcgggcc ttggcctcgg ggctgaaggc ggtcttcacg
      601 tagagttggc ccaggtcctc gcccagggcg cggtcggcgg cggacagcac gcgcttccag
      661 cgggggcgca gctccgtggc gcccgaaagg gttttgccgt agaaggcgaa gttctcgttc
      721 acgaaggcgg atcccaggaa gggcgccgcg gtcttcagca cgtgccaccg gaggtagacc
      781 cgccagtcgg ccaggggctc cgacttcagc aggcccgcca gggccttgaa gaactccggc
      841 tggcccacca ggacgtgggt ctcgccggcg ggcaggccca cggcggtgaa gtagccgttc
      901 cagtcaaggt cggccaggcc gcggaggtcc ttccgggcca ccttgtggta gttggcctgc
      961 ggatcgcgca ggtccacgag ggtgcggctg gccttggcca gcttcgtctc cagggccagg
     1021 atgcccttgg ccctggcctg ggcggtctcg ggctggtcgc ccgcgaggac caggatccgc
     1081 gccacatgct ggacgtaagc ctggcggatg gcctccgcct ccttcccggg gcgcaggtag
     1141 tagtcgcgct ccggcagccc caggccgccc tgattgaagc tggcgatcat ggcgctgctg
     1201 tccttgtcgt ccacctgcac gctgaagccg aggccggcct gcacgcccgt ggcgcgcagg
     1261 cgccccatct ggacgagcac ttcccgcggc gaggccaatg cccgaatggc ggcgaaggcc
     1321 ggggcaaggg gcttgaagcc ctccttctcg atgcgggcct cgtccatgcc ggaggcgtag
     1381 aagtcgccca cccgctgggg gatgctgcct tcggggccgc gggtgcgggc ggaagtctcg
     1441 aggatgccct tgaggatggc gtagttccgt tcgtcgattt cctggttcac gccgtacgag
     1501 gcgtactcgc cggggatggc cacctggtcg aaggcgccgt tggcgtagcc gtagaaatcc
     1561 cggcaagggg aggcggcggt gtggatgtag gcggggtcca ccccgaggat cggccgggga
     1621 gcggcggcgg gggtttccgc cgcgaggggg gcgaccagcg ccagggcgag ccatgcggat
     1681 cgaaggttca agggaattcc tttcagcagg ggcttgggat ggccgggggg gctaccagat
     1741 ggcggggcgg accttcgcgt cgcgcttcat ggcctggccg tcggc
//
LOCUS       DATGWW010000729         1521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_226084, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000729 DATGWW010000000
VERSION     DATGWW010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226084"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1504)
                     /locus_tag="VK150_10520"
     CDS             complement(<1..1504)
                     /locus_tag="VK150_10520"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HLP31787.1"
                     /translation="MSLAPLPLSSRVTVLRGLGPARAAALQEAGIETLRDLLWNLPYR
                     YVDRGSLRPLGSLEMRGLEPVEAGIVTVLGTIQDLRQSTTRVQRMALTEVLLGDDTGT
                     LRLVWFNQPYLGRTLKVGDRLLVFGTLFPGRHGLEMRGPQFEVMDRGGDIGWVRRFLP
                     LYRRLGPLTGRVRQRLVTEGLERAHLLEDWLPLDLARDLPDTLTALRLLHDPPDESEA
                     RDLEAGTTPAHRRLASEELFAFSLGVALRRAGRLQRRGLVVPTSPGLRERLRSFLPFR
                     LTGAQRRAFKEIVDDLTAGRVMNRLLQGDVGSGKTLVALLALAMVAETGGQGALLVPT
                     EVLARQHAASFKRYLGDQGGSMQLLLGGMKAAEKRAALARIASGEARYVVGTHALFQE
                     SVAFHRLQLVVVDEQHRFGVKQREALKEKGGDPHWLVMSATPIPRSLALAVFGDLDQS
                     VLDELPPGRQPITTRLYKPDAAERAWEQVRRELAEGRQAFVVSPSIDPSDE"
BASE COUNT          225 a          541 c          559 g          196 t
ORIGIN      
        1 cctcgtcgga gggatcgatg ctcgggctca ccacgaaggc ctggcggccc tcggccagct
       61 cgcgacgcac ctgttcccag gcccgctcgg ccgcgtcggg cttgtacagc cgggtggtga
      121 tgggctggcg ccccggaggc aattcatcca gcacgctctg atccaggtcg ccgaacacgg
      181 ccagggccag cgaccgcgga atgggcgtgg cgctcatcac cagccagtgg ggatcgcctc
      241 ccttctcctt caaggcctcg cgctgcttca cgccgaaccg gtgctgctcg tccaccacca
      301 ccagctgcag ccggtggaag gccacggatt cctggaacag cgcgtgggtg cccaccacgt
      361 agcgggcctc gccgctggcg atgcgcgcca gggcggcccg cttttcggcg gccttcatgc
      421 cgcccagcag cagctgcatg gatccgccct gatcgcccag gtagcgtttg aagctggcgg
      481 catgctggcg ggccagcacc tcggtaggca ccagcagggc gccctgcccc ccggtctccg
      541 ccaccatggc gagggccagc agggccacca gggtcttgcc gctgcccacg tcgccctgga
      601 ggaggcggtt catgacccga ccggcagtga ggtcgtccac gatctctttg aaggcgcggc
      661 gctgggcgcc ggtgagccgg aaaggcagga aggaacgcag gcgctcccgg agcccaggcg
      721 aagtgggcac cacgaggccc cggcgctgca gccgtcccgc gcggcggagg gccacgccca
      781 gggagaaggc gaacagctcc tcggaggcca ggcggcggtg ggcgggcgtg gtgcccgcct
      841 ccaggtcgcg ggcctcgctc tcgtccggag gatcgtgcag caggcgcagg gccgtgagcg
      901 tgtccggcag gtcccgggcg aggtccaggg gcagccagtc ctccaggagg tgggcccgtt
      961 cgagcccctc ggtcaccagc ctctgccgca cccgacccgt gagggggccc agccggcggt
     1021 acagggggag gaagcggcgc acccagccga tgtcgccgcc gcggtccatg acctcgaact
     1081 gcgggccccg catctccaag ccgtgccggc cgggaaagag ggtgccgaac accagcaggc
     1141 ggtcacccac cttgagcgtg cggcccaggt agggctggtt gaaccagacg agacgcagcg
     1201 tgccggtgtc gtcgcccagc agcacttcgg tgagggccat gcgctggacc cgcgtggtgc
     1261 tctgccgcag gtcctggatg gtgccgagca ccgtgacgat gccggcttcc acgggctcga
     1321 gcccccgcat ctcgaggctc ccaaggggcc ggaggctgcc ccggtccaca tagcggtagg
     1381 gaaggttcca cagcaggtcc cgcagggtct cgatgcccgc ctcctggagg gcggcggccc
     1441 gcgccggtcc caggccccgg aggaccgtga cgcgggagga gaggggaagc ggcgcgaggg
     1501 acatggggcc ccctcagcct a
//
LOCUS       DATGWW010000730         2478 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_172793, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000730 DATGWW010000000
VERSION     DATGWW010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2478
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172793"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..1330)
                     /locus_tag="VK150_10525"
     CDS             complement(35..1330)
                     /locus_tag="VK150_10525"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLP31788.1"
                     /translation="MPQAVPALERPAPPPAFRWLVLVVISLAMFGNYYVYDAISPLAD
                     VLQKQLGFSDANLGLLQGIYSVPNIIMVLLGGILIDRIGVKRATFIFGVLCFLGALIT
                     AISPKLWVMASGRLVFGLGAESLIVAVTAAVAQWFRGKELSFAFGINLLIARLGSFAA
                     LNSPTWARGAYGSWRTPLLIATVFGAMCVIAAGIYWLMENGAARKYTLGSQGGTDKVV
                     WADLLKFSPTYWYVVALCITFYSGIFPFQTFAVKFFQDAHGATRELGGFLSSMLTLCA
                     MIGTPLFGLLVDRVGKRALFMMVGSLLLIPVYLLMAYTHVSLYVPMAMMGIAFSLIPA
                     VMWPSVAYLVPEEKLGTAYGLMTLIQNVGLAGFNFLIGWANDFAGASGAHPAGYRLGM
                     WIFSSLGFFGFFFAYLLRRAETGPDAKGLETITTANQPV"
     gene            1524..>2478
                     /locus_tag="VK150_10530"
     CDS             1524..>2478
                     /locus_tag="VK150_10530"
                     /inference="COORDINATES: protein motif:HMM:NF013604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31789.1"
                     /translation="MPSRLALRLAAAAILLAPALGARQPDSPLADTARQHLDARVYQL
                     GLDRDHGFRAKSVFDEATGESHVRMDQLYKGVRVFEGQAIVHMLGGAVHGRTDALVRG
                     LNLNVSPSLAPAEALASAHQALAPKGAYAHTPSAELVVATVTREVETPKGLRSFSQPA
                     LAYHIHTELENGADETRHTDFLVDAHTGAILERWSTLHTAGANGTGLSQYSGTVVLNT
                     NSTATGFELYDTTRGGGVKTYNLNHATSGTGTLYTDADNTWGDSANYVEGSSTTAANG
                     QTAGVDAHFGVQTTWDMYKNVFGRNGIDGAGSATYSRVHYSN"
BASE COUNT          476 a          872 c          777 g          353 t
ORIGIN      
        1 gctgcctccg gatgggtcca ggaagtgtag cgcttcagac aggctggttc gccgtggtga
       61 tcgtctcgag gcccttggcg tcggggccgg tctcggcgcg gcgcagcagg taggcgaaga
      121 agaatccgaa gaagcccagg ctgctgaaga tccacatgcc caggcggtag cccgccggat
      181 gcgcgccgct ggcgcccgcg aagtcgttgg cccagccgat gaggaagttg aaccccgcca
      241 gacccacatt ctggatgagc gtcatcaggc cataggcggt gcccagcttt tcctcgggca
      301 ccaggtaggc cacggaaggc cacatgaccg ccgggatgag gctgaaggca atgcccatca
      361 tggccatggg cacatagagg ctcacgtggg tgtaggccat gagcaggtaa acggggatga
      421 ggagcaggct gccgaccatc atgaacaggg cccgcttgcc cacgcgatcc accagcaggc
      481 caaagagcgg cgtgccgatc atggcgcaga gggtgagcat ggaggacagg aaacccccca
      541 gctcgcgcgt ggcgccgtgg gcatcctgga agaacttcac ggcgaaggtc tggaagggga
      601 agataccgct gtagaaggtg atgcagagcg ccaccacgta ccagtaggtg ggactgaact
      661 tcaggaggtc ggcccagacc accttgtccg tgccgccctg ggaacccagg gtgtacttcc
      721 gggcggcgcc gttctccatg agccagtaga tgcccgcggc gatcacacac atggccccga
      781 acaccgtggc gatgagcagg ggcgtccgcc aggatccgta ggccccccgg gcccaggtgg
      841 ggctgttcag ggctgcgaag gagcccaggc gggcgatgag gaggttgatg ccgaaggcga
      901 agctcagctc cttgccccgg aaccactgcg ccaccgccgc ggtcaccgcc acgatgaggc
      961 tttcggctcc caatccgaag accaggcgcc ccgaggccat gacccagagc ttcgggctga
     1021 tggctgtgat gagcgctccc aggaagcaga gcaccccgaa gatgaaggtg gcgcgcttga
     1081 ccccgatgcg gtcgatgagg atgccgccca gcagcaccat gatgatgttg ggcacgctgt
     1141 agatgccctg gagcaggccg aggttggcgt ccgagaagcc cagctgcttc tgcagcacgt
     1201 ccgcgagtgg gctgatggcg tcatagacgt agtagttgcc gaacatcgca aggctgatga
     1261 ccacgagcac cagccaccgg aaggcgggcg gcggcgcggg gcgttcgagg gctggcacgg
     1321 cttgcggcat ggaactcctg cgcaggacaa cccttcatcc tgccatcaag gggctgggcg
     1381 aacccagttg gaaatgattc tcaggcaaat taacaactct taacaagggg tcccgccaat
     1441 agaaattcta ggattggtca atcccgctct acatctttca aatcccattt caccccggag
     1501 tcccggctcc cctggaggtc cctatgcctt cccgcctcgc cctgcgtctc gccgccgccg
     1561 ccatcctgct ggcgcccgcc ctcggcgccc gccagcccga ttcccccctg gccgacacgg
     1621 cccgccagca cctggacgcc cgggtctacc agctgggcct cgaccgggac catggcttcc
     1681 gcgccaagag cgtgttcgac gaggccaccg gcgaatcgca cgtgcgcatg gaccagctct
     1741 acaagggcgt ccgcgtcttc gagggccagg ccatcgtcca catgctgggc ggcgctgtgc
     1801 atggccgcac cgatgcgctg gtccggggcc tcaacctcaa cgtctccccc tctctcgccc
     1861 ccgccgaggc cctcgcctcc gcccaccagg ccctcgcccc caagggcgcc tacgcccaca
     1921 cccccagcgc cgagctggtg gtggccaccg tcacccgcga ggtggagacc cccaagggcc
     1981 tccgcagctt ctcccagccc gccctggcct atcacatcca caccgagctt gagaacggcg
     2041 cggatgaaac ccgccacacc gacttcctgg tggacgccca caccggcgcc atcctcgagc
     2101 gctggagcac cctccacacc gccggcgcca acggcacggg cctgagccag tacagcggca
     2161 cggtcgtgct gaacaccaac agcaccgcca ccggcttcga actctacgac accacccgcg
     2221 gtggcggcgt gaagacctac aacctgaacc acgccacctc cggcaccggc accctctaca
     2281 ccgacgccga caacacttgg ggcgacagcg ccaactacgt ggagggctcc tccaccaccg
     2341 ccgcgaacgg ccagactgcc ggcgtggacg cgcacttcgg cgtgcagacc acctgggaca
     2401 tgtacaagaa cgtcttcggc cgcaacggca tcgacggcgc cggttccgcc acctacagcc
     2461 gcgtgcacta cagcaaca
//
LOCUS       DATGWW010000731         3808 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_174225, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000731 DATGWW010000000
VERSION     DATGWW010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3808
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174225"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1118)
                     /locus_tag="VK150_10535"
     CDS             complement(<1..1118)
                     /locus_tag="VK150_10535"
                     /inference="COORDINATES: protein motif:HMM:NF016724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-associated domain-containing protein"
                     /protein_id="HLP31790.1"
                     /translation="MIALRPDNPLIVQSDRTLLLEVAHPAFEQVRDELARFAELVKSP
                     EHIHTYRITPLSLWNASASGVACQDMIDTLNAWSKYPVPQNLLQEIEDHGTRYGKLRL
                     VAKGDRLALEMDDRGLFWELENQKSLQGLLAEPYPDEKGIYLNTGMRGEVKLQLIRLG
                     HPVQDMAGYKPGDPLPFELSSTTKQNGKPFGLRHYQQAAVDVFHAGGGPDGGAGVLVL
                     PCGAGKTVIGIGCMGSLQTHTLVLTTNGTAVKQWKQELLDKTTLTEDQVGLYMGDIKE
                     IKPVTIATYQILTYRKSKGGPFEHFKIFEAANWGLVIYDEVHMLPAPIFRAVAELQAK
                     RRLGLTATLVREDGKEEDVFSLIGPKRVDVPWKMLEKDG"
     gene            1375..>3808
                     /locus_tag="VK150_10540"
     CDS             1375..>3808
                     /locus_tag="VK150_10540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31791.1"
                     /translation="MGIKTTRVLTLLSLILALPLDAQEDAYKAKYKVNYGRFTRGDDA
                     KVVDEAWGRIEWFRERMGGELGADFTRHLLSEAEKERAKYPALFQSPGGPERPVALNG
                     TAWTNIGPTTSAFTQNGIQLTKVDSGRLRVILPDTADATGNTVYVLASGGGLWKTTNF
                     LSATPTWTPLTDFIGSNLSGSAAFGRATSTLFVGAGDPFDLGIGGFMVKSTNGGTSWS
                     SSIQLGTASKVYDIKVDTTQATDIVLVGTNNGLHRSTDAGATYAPVASIPTGSKVWSL
                     ARTSTGWLAATESTGASPTGTLYRSTDQGATWTIVTGALSGAGRITLGQGLPGDAVVY
                     GFAANVGDSAQLDLFRSGDGGATWTPLNITTKAPTNPNADSGTLDLMDSQAFYNHMIL
                     VDPSDASRNTVYLGGQLSSAKTTNGGTTWTLTSNWLAQYGLPYIHADFHCAAYSNLGG
                     VARLYFGTDGGIFTSTDGGTTWDDTKNKGLVNHLIYALAANPGVPGSALVGLQDNGTR
                     IRSGLTSTFNQVRGGDGFGVGWAQDVTSPSAVSLSSYVYNSIRRSTTSPVVDQANWSA
                     FTTGLTSAGSSSVYNFVTPIVTPPAGADPTGQAFFTYSKTGVIYQSSASGWTAIGTAG
                     SGGITSGRIVRAVSHGIGVSPTDLQHIAAAGSSGYLMLTANGGGTWTEVFLGAAPATP
                     GLVAGWQGFNSNVAWANNNLLYACSEATAAGAVRVAKSTNGGSAWTAANGNLPDVPVT
                     KLVVDPGDGTGNTVYAATWLGVYRTTDGGATWSVFGTGLPQGRATDIWIAPDSSSIRV
                     STWGRGVWEMVNA"
BASE COUNT          634 a         1399 c         1184 g          591 t
ORIGIN      
        1 ccgtccttct ccagcatctt ccagggcaca tccacccgct tgggcccgat gaggctgaag
       61 acgtcctcct ccttgccgtc ctcgcgcacc agcgtggccg tcagtcccag gcggcgcttg
      121 gcctgcagct ccgccaccgc gcggaagatg ggcgccggca gcatgtgcac ctcgtcgtag
      181 atcaccagac cccagttggc ggcctcgaag atcttgaagt gctcgaaggg gccgcccttg
      241 ctcttgcggt aggtgaggat ctggtaggtg gcgatggtga ccggcttgat ttccttgatg
      301 tcgcccatgt agaggcccac ctggtcctcg gtgagggtgg tcttgtccag cagctcctgc
      361 ttccactgct tcacggcggt gccgttggtg gtgagcacca gggtgtgggt ctgcaggctg
      421 cccatgcagc cgatgccgat gacggtcttg ccggccccgc agggcagcac cagcacgccg
      481 gcgccgccat cgggtccgcc gccggcgtgg aagacgtcga cggccgcctg ttgatagtgc
      541 cgtaggccaa agggcttgcc gttctgcttg gtggtggagg aaagctcgaa gggcagcgga
      601 tccccgggct tgtagccggc catgtcctgg acggggtggc ccaggcggat gagctgcagc
      661 ttcacctcgc cccgcatgcc ggtgttcagg tagatcccct tctcgtccgg gtagggctcg
      721 gccagcaggc cctgcaggga tttctggttc tccagctccc agaagaggcc ccggtcgtcc
      781 atttccaggg ccaggcggtc gcccttggcc accagccgca acttgccgta gcgggtgccg
      841 tggtcctcga tctcctgcag caagttctgt ggcacggggt acttcgacca ggcgttcagg
      901 gtgtcgatca tgtcctggca ggccacgccg gaggccgagg cgttccagag gctcaagggg
      961 gtgatgcggt aggtgtggat gtgctccggg ctcttcacca gctccgcgaa ccgcgccagt
     1021 tcgtcgcgga cctgctcgaa tgccggatgg gccacctcga gcagcagcgt gcggtcgctt
     1081 tggacgatca gcggattgtc ggggcggagg gcgatcacgg tgaggcagac ccaaaccttt
     1141 gagcgtacgc ggccggaccg gggccggtca acgaaagctg cccgggaggc cggggaggcg
     1201 ccacgttccg ggcggtacct gccgggtgga tgccgggaag gcccgaacaa cctccgtcaa
     1261 ggtcaggtta agaaaaggta agccgacgcc gaacctgaag cggactatag tcttggatcc
     1321 cccgagaacg gcagcgcccc acctcaacgt cgcgggatca agcctggagc caccatgggc
     1381 atcaagacca cacgcgtcct caccctgctt tcgctcatcc tcgccctccc gctggacgcg
     1441 caggaagacg cctacaaagc caagtacaag gtcaactacg gccggttcac ccggggcgac
     1501 gacgccaagg tggtggacga ggcctggggc cgcatcgagt ggttccgcga gcgcatgggc
     1561 ggcgagctcg gtgccgactt cacccggcac ctcctcagcg aagccgagaa ggagcgggcc
     1621 aagtacccgg ccctgttcca gagccccggt ggccccgagc ggcccgtggc cctgaacggc
     1681 acggcctgga ccaacattgg cccaaccacc tccgccttca cccagaacgg catccagctc
     1741 accaaggtgg acagtggccg gctgcgcgtc atcctgcccg acaccgccga tgccaccggt
     1801 aacacggtct acgtgctggc cagcggcggc ggcctctgga agaccaccaa cttcctgagc
     1861 gccaccccca cctggacccc gctcaccgat ttcatcggca gcaacctctc cggttcggcc
     1921 gccttcggcc gggccaccag caccctcttc gtgggtgcgg gcgatccctt cgacctgggc
     1981 atcggcggct tcatggtgaa gtccaccaat ggcggcacct cctggtcttc ttccatccag
     2041 ctgggcaccg ccagcaaggt ctacgacatc aaggtcgaca ccacccaggc cacggacatc
     2101 gtgctggtgg gcaccaacaa cggcctgcac cgctcgacgg acgccggcgc cacctacgcc
     2161 cccgtcgcca gcatccccac cggctccaag gtctggagcc tcgcccgcac cagcaccggc
     2221 tggttggcgg ccaccgaatc caccggcgcc tcccccaccg gaacgcttta ccgcagcacc
     2281 gatcagggcg ccacctggac catcgtcacc ggcgcactca gcggcgccgg ccgcatcacc
     2341 ctgggccagg gccttccggg cgacgcggtc gtctacggtt ttgcggcgaa cgtcggcgat
     2401 tccgcccagc tggacctctt ccgctcgggc gatggcggcg ccacctggac gcccctcaac
     2461 atcaccacga aggcccccac caatcccaac gccgacagcg gcacccttga tttgatggac
     2521 agccaggcct tctacaacca catgatcctg gtggatccca gcgacgcctc ccgcaacacg
     2581 gtctacctcg gcggccagct gagctccgcg aagaccacca atggcggcac cacctggacc
     2641 ctgaccagca actggctggc ccagtacggc ctcccctaca tccacgcgga cttccactgc
     2701 gcggcctatt ccaacctcgg cggcgtggcg cggctctact tcggcacgga cggcggcatc
     2761 ttcaccagca ccgatggcgg caccacctgg gacgacacca agaacaaagg cctggtgaac
     2821 cacctcatct atgcgctggc cgccaacccc ggcgtccccg gcagcgccct ggtgggtctg
     2881 caggacaacg gcacccgcat ccgcagcggc ctcacctcca ccttcaacca ggtgcggggc
     2941 ggcgacggct tcggcgtggg ctgggcccag gacgtgacct cccccagcgc cgtgtccctc
     3001 agttcctatg tctacaactc gatccgacgc tcgaccacca gccccgtggt ggatcaggcc
     3061 aactggagcg ccttcaccac cggcctcact tccgccggca gttcgagcgt ctacaacttc
     3121 gtcacgccca tcgtcacgcc ccctgccggg gcagatccca cgggccaggc tttcttcacc
     3181 tacagcaaga ccggcgtgat ctaccagagc agcgccagcg gctggaccgc catcggcacc
     3241 gccggctccg gcggcattac ctcaggccgc atcgtccgcg ccgtcagcca cggcatcggc
     3301 gtgagcccca cagacctcca gcacatcgcc gcggccggca gcagcggcta cctgatgctc
     3361 accgccaacg gcggcggcac ctggacggag gtcttcctcg gtgccgctcc ggccacgccc
     3421 ggcctggtgg ccggctggca gggcttcaac tcgaacgtgg cctgggccaa caacaacctg
     3481 ctctacgcct gctcggaggc caccgccgcc ggcgcagtgc gcgtggcgaa atccaccaat
     3541 ggcggcagcg catggaccgc agccaatgga aacctgcccg acgtgcccgt aaccaagctg
     3601 gtggtcgatc cgggcgacgg cacgggtaac accgtctatg cggccacctg gctgggcgtc
     3661 taccgcacca ccgacggcgg tgccacctgg agcgtcttcg gcacgggcct gccccagggc
     3721 cgggccacgg acatctggat cgcccctgac agctccagca tccgcgtctc gacctggggc
     3781 cgcggcgtct gggagatggt caacgccc
//
LOCUS       DATGWW010000732         1661 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_175127, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000732 DATGWW010000000
VERSION     DATGWW010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175127"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1266)
                     /locus_tag="VK150_10545"
     CDS             complement(<1..1266)
                     /locus_tag="VK150_10545"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLP31792.1"
                     /translation="MARPWLKLLDPGLTALKAATGTSFEDRLGLARALNGRARHDEAR
                     EILDQLLAEDRSHAEAWFERLLCLSDHATEEEGLELMGQLESLRDEHPTVGGHLRNLG
                     YLRLLLQDVDGAEHALQQALALNGQDPKALELAGLVQLHLNHAPEAKAWLLKALSLNP
                     KDPRTLRLLAIAMEQLGDLAGAEAQLVAALQAEDSYYWGWHALGELLLKRGDLAEGLR
                     CIQRARSLHVCDPASYFILSEIFSEQGHLELAAGQLHTLMLLAPPGPVLAEAQALLGE
                     LKRDMGDRDGALSYFSLATETDPDAANPWAALGDMAREENRWEDALRCYREALMREPD
                     AADLQVQLGYALLETRQGQAAEQAFLQSLELDPGEYSAYLGLSEVYRFANRREDQMSM
                     VEQAMVLAPDDSDVWNAKGVALEVTDRWKE"
     gene            complement(1295..>1661)
                     /locus_tag="VK150_10550"
     CDS             complement(1295..>1661)
                     /locus_tag="VK150_10550"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HLP31793.1"
                     /translation="LPLAELLPRSAVLSLHCPLTEQTKGLLNRGALETLPAGAVIINT
                     ARGGILDETAAMDLLDAGRLGGVGLDVYDGEPKVNPRWFTTPRTVLLPHLGSATVETR
                     QAMAHLLCDGLAAALAPAR"
BASE COUNT          223 a          558 c          618 g          262 t
ORIGIN      
        1 ctccttccag cggtccgtga cctccagggc gacgcccttg gcgttccaca cgtcggaatc
       61 gtcgggcgcg aggaccatgg cctgctccac catgctcatc tgatcctccc ggcggttggc
      121 gaaccggtag acctcggaga ggcccaggta ggcgctgtac tcgccgggat ccagctccag
      181 ggactgcagg aaggcctgct ccgccgcctg gccctgccgc gtctcgagca gggcgtagcc
      241 cagctgcacc tgcaggtccg ccgcgtcagg ttcgcgcatg agggcttcgc gatagcagcg
      301 cagcgcgtcc tcccagcggt tctcctcgcg ggccatgtcg cccaacgccg cccaggggtt
      361 cgcggcgtcc gggtcggtct cggtggcgag gctgaagtac gacagcgcgc cgtcgcggtc
      421 gcccatgtcg cgcttcaatt cgcccagcag tgcctgcgcc tcggccagca ccgggccagg
      481 gggggccagc agcatgagcg tgtggagctg gccggcggcc agttccaggt ggccctgttc
      541 gctgaagatc tcagagagga tgaagtagct ggcgggatcg cacacatgca ggctgcgcgc
      601 ccgctggatg cagcgcaggc cttcggccag gtcgccgcgc ttgagcagca gctcgcccag
      661 ggcgtgccag ccccagtagt aggagtcctc cgcctggagg gcggccacga gctgggcctc
      721 ggcgccggcc aggtctccca actgttccat ggcaatggcc aacaggcgga gcgtgcgggg
      781 atccttcgga ttgaggctga gggccttcag cagccacgcc ttggcctcgg gcgcgtggtt
      841 gaggtggagc tgcacgaggc ccgcgagctc cagggccttg ggatcctggc cgttgagggc
      901 cagggcctgc tgcagggcgt gctcggcgcc gtccacgtcc tggaggagca ggcgcaggta
      961 gcccaggttg cgcaggtggc ctcccacggt ggggtgctcg tcgcgcaggg attccagctg
     1021 gcccatcagc tccaggccct cttcctcggt ggcgtggtcg ctgaggcaga gcaggcgctc
     1081 gaaccaggct tccgcgtggg agcggtcctc ggccagcagt tggtccagga tctcccgggc
     1141 ctcgtcgtgg cgcgcccgtc cattgagggc gcgggcgagc ccgaggcggt cttcgaagga
     1201 agtcccggtg gcggccttga gggccgtcag tccgggatcc agcagcttga gccaggggcg
     1261 tgccatggtg tgcctcgtgt ggggttccag ggtatcacct ggcgggagcc aaggccgccg
     1321 cgagtccgtc gcacagcagg tgggccatgg cctggcgggt ctccaccgtg gcagacccga
     1381 ggtgcggcag cagcacggtg cgcggggtgg tgaaccaccg tgggttgacc ttcggctcgc
     1441 cgtcgtagac atccaggccg acgccgccga gccgtccggc gtccagcaga tccatggcgg
     1501 ccgtttcatc caggatgccg ccccgggcgg tgttgatgat caccgcgccg gccggcagcg
     1561 tctccagcgc gccgcggttc agcaggccct tggtctgctc cgtgagcggg cagtgcaggg
     1621 agaggaccgc gctgcggggc agcagctccg ccagcggcag g
//
LOCUS       DATGWW010000733         2978 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_175412, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000733 DATGWW010000000
VERSION     DATGWW010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2978
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175412"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..344
                     /locus_tag="VK150_10555"
     CDS             <1..344
                     /locus_tag="VK150_10555"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HLP31794.1"
                     /translation="PEKNPVAMSPESVTRGEALFVNRCAGCHGKKGDGKGANSLDILP
                     RPRNLRNAAFVNSVDDRRLFESIQYGVQGTAMPSWIDYGLTNNDVGDLVNFIRSINPT
                     PKGGQHAAAIQ"
     gene            325..1719
                     /locus_tag="VK150_10560"
     CDS             325..1719
                     /locus_tag="VK150_10560"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HLP31795.1"
                     /translation="MQPQFSKAEAGNAPAGALVHDDATAKWFLVSSVAYFFIVGIIAV
                     IIAAKFVWPDLMGTMSWLTYGRLRPLHVNGMLFGWLLAADMGLAYYVIPRLCGVKLWS
                     EKLGLATAALWNVIILGAVVSLLAGWNQGWEYAELPMALDVLVVVAWIMFGLNLFMTV
                     ASRKHQAMYVTIWYTMGCILWTAFVYLTGNFAVLFTTGTNQANLNWMYVHNAVGLIFT
                     PIGLAIAYYFIPRASNTPLHSHKLSMVGFWSLAFVYVWTGAHHMIHGPISQWLQTIAI
                     AFSVMLLIPVWAVVYNLFATMKGQWHQLRESVALKFLMSGVVFYLLTCFQGPMHSLRT
                     VNAIVSKTDWIPGHAHMAVLGCFSFFAIAGTYFAVPKIWGKALHSQSLANWSYWMLMI
                     GGLGFFTTLWLGGFWQGWQWNNWSIPFIDTVIALKPIWIVRFVSGVLMFLGIVMFAYN
                     ILATAMGANEEAAA"
     gene            1741..2310
                     /locus_tag="VK150_10565"
     CDS             1741..2310
                     /locus_tag="VK150_10565"
                     /inference="COORDINATES: protein motif:HMM:NF014486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit II"
                     /protein_id="HLP31796.1"
                     /translation="MFKKADTSALWAIGLSLLLFFIGGILTTVVPPLVDTTWAKPFEN
                     ADPAKGMTGKVVPLTDLQKKGREIYVREGCWYCHTQQVRTLLADTKRYGWRGVDAPIS
                     TPDEFVYDNPHMFGTKRTGPDLARVGGKYDEQWHRTHFRNPRDLVKGSIMPPYPWIAN
                     NPAEFQAMVAYLQSLGRGKDWRPAQDYEK"
     gene            2314..2487
                     /locus_tag="VK150_10570"
     CDS             2314..2487
                     /locus_tag="VK150_10570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31797.1"
                     /translation="MDFTYPSIYFAYLFFALMAGLAVFFFIRSRRDGYWGEKGEDAKF
                     HVFEDDETIRRNP"
     gene            2484..2795
                     /locus_tag="VK150_10575"
     CDS             2484..2795
                     /locus_tag="VK150_10575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31798.1"
                     /translation="MSEQGKKDDQGLKEYADGWMTERKGTDAPGFLKLAIPVIGLGGF
                     GYLIFQMYGDVGHATRGPLVQQFNAATRTSPVLMYAIALMVLVYVLIVAIFAFRKPHE
                     D"
BASE COUNT          529 a         1022 c          890 g          537 t
ORIGIN      
        1 tacccgagaa gaatccggtc gccatgagtc ccgaatccgt gacccgcggc gaggcgctct
       61 tcgtcaaccg ctgcgccggc tgccacggga agaagggcga cggcaagggc gcgaactcgc
      121 tggacatcct gccgaggccg cggaacctgc gcaacgccgc gttcgtcaac agcgtcgacg
      181 accgccggct cttcgaatcc atccagtacg gcgtgcaggg cacggccatg ccgtcctgga
      241 tcgactacgg actcacgaac aacgacgtgg gcgacctcgt caacttcatc cgaagcatca
      301 atccgacacc gaagggaggc cagcatgcag ccgcaattca gtaaggccga agcggggaac
      361 gctccggcag gagcgctcgt ccacgacgac gccaccgcca aatggttcct cgtgagctcg
      421 gtggcctact tcttcatcgt gggcatcatc gccgtgatca tcgccgccaa gttcgtgtgg
      481 cccgacctca tgggcaccat gtcctggctg acctacggcc ggctgcgtcc cctgcacgtg
      541 aacggcatgc tcttcgggtg gctgctggcc gccgacatgg gcctggccta ctacgtcatt
      601 ccccgcctct gcggcgtgaa gctctggagc gagaagctcg gcctcgccac cgcggccctg
      661 tggaatgtca tcatcctggg cgccgtggtc agcctgctgg cgggctggaa ccagggctgg
      721 gagtacgccg agctgcccat ggccctcgac gtgctggtgg tcgtggcctg gatcatgttc
      781 ggcctgaacc tcttcatgac ggtggcctct cgcaagcacc aggcgatgta cgtgacgatc
      841 tggtacacca tgggctgcat cctctggacg gccttcgtct acctgaccgg aaacttcgcg
      901 gtgctgttca ccacgggcac caaccaggca aacctgaact ggatgtacgt gcacaacgcc
      961 gtgggcctga tcttcacgcc catcggcctc gccatcgcct actacttcat cccccgcgcc
     1021 tcgaacaccc cgctgcacag ccacaagctg tccatggtgg gcttctggtc cctggccttc
     1081 gtctacgtct ggaccggcgc ccaccacatg atccacggac ccatctccca gtggctgcag
     1141 accatcgcca tcgccttctc ggtgatgctg ctgattccgg tgtgggccgt ggtctacaac
     1201 ctgttcgcca ccatgaaggg gcagtggcac cagctccgcg agagcgtggc cctcaagttc
     1261 ctcatgtccg gcgtggtgtt ctacctgctc acctgcttcc agggccccat gcacagcctg
     1321 cgcacggtga acgccatcgt gtcgaagacc gactggatcc ccggccacgc ccacatggcg
     1381 gtgctgggct gcttcagctt cttcgccatc gcgggcacct acttcgccgt gccgaagatc
     1441 tggggcaagg cgctgcactc ccagtcgctg gccaactgga gctactggat gctgatgatc
     1501 ggcggcctgg gcttcttcac caccctctgg ctgggcggct tctggcaggg gtggcagtgg
     1561 aacaactgga gcatcccctt catcgacacc gtcatcgccc tcaagcccat ctggatcgtc
     1621 cggttcgtct cgggtgtcct gatgttcctg ggcatcgtga tgttcgccta caacattctg
     1681 gccaccgcca tgggcgccaa cgaggaggcg gccgcctagg ccgcggaaag gagagcgacc
     1741 atgttcaaga aagccgacac cagcgccctt tgggccattg gactttccct gctgctgttc
     1801 ttcatcggcg gcatcctcac caccgtggtg ccgcccctcg tggacaccac ctgggccaag
     1861 cccttcgaga acgccgatcc cgccaagggc atgaccggca aggtggtgcc cctcacggac
     1921 ctgcagaaga agggccgcga gatctatgtg cgcgaaggct gctggtactg ccacacccag
     1981 caggtccgca ccctcctggc cgacaccaag cggtacggct ggcgcggggt ggacgccccc
     2041 atttccacgc ccgacgagtt cgtctacgac aaccctcaca tgttcggcac caagcgcacc
     2101 ggtccggatc tcgccagggt gggcggcaag tatgacgagc agtggcaccg cacccacttc
     2161 cgcaatcccc gcgacctcgt gaagggctcc atcatgccgc cctatccctg gatcgcgaac
     2221 aatcccgccg agttccaggc catggtcgcc tacctccaga gcctcggccg cggcaaggac
     2281 tggcgccccg cccaggacta cgagaagtag gccatggact tcacctatcc cagcatctac
     2341 ttcgcctacc tcttcttcgc gctgatggcc ggactggctg tgttcttctt catccggtcg
     2401 aggcgcgacg ggtactgggg agagaagggc gaggacgcga aattccacgt gttcgaagac
     2461 gacgagacca tcaggaggaa cccatgagcg agcagggcaa gaaggacgac cagggcctca
     2521 aggaatacgc cgacggctgg atgaccgagc gcaaggggac ggatgccccc ggcttcctga
     2581 agctggcgat tccggtcatc ggcctgggcg gattcggcta cttgatcttc cagatgtacg
     2641 gcgatgtcgg ccacgcaacc cgtggccccc tcgtgcagca gttcaatgcc gccaccagga
     2701 caagcccggt gctgatgtac gcgatcgcct tgatggtcct ggtctacgtg ctcatcgtcg
     2761 cgattttcgc cttccgcaag ccccacgagg attgacgctg tggacaacgc cagctggcag
     2821 ttcagggttc ccgacgactc gcagtactgg gtcgagatgg tcaagtgcca gcacgcctgt
     2881 ccggtgcaca cggacgcgtg cgggtacgtg acggccatcg ccgagggccg ctatgaagag
     2941 gcctatcgca ttgcgcgggc caccaacccc ttcgcctc
//
LOCUS       DATGWW010000734         2241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_175495, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000734 DATGWW010000000
VERSION     DATGWW010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175495"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..279
                     /locus_tag="VK150_10580"
     CDS             <1..279
                     /locus_tag="VK150_10580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31799.1"
                     /translation="DPTVFFSVNTQAAQADFASRNVLVPAFNLENQESLAPLGTTTAA
                     LLYGGFQQKKAAAGDQVLAQYHGTLVPPFCTAIARGFFGAVLAAAAAQ"
     gene            complement(295..777)
                     /gene="ybaK"
                     /locus_tag="VK150_10585"
     CDS             complement(295..777)
                     /gene="ybaK"
                     /locus_tag="VK150_10585"
                     /inference="COORDINATES: protein motif:HMM:TIGR00011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HLP31800.1"
                     /translation="MSKAPSTNATRLLKQAGVAYTEHLYRYEEHGGTAVSARELGVAE
                     HAVIKTLVMEDERAAPLIILMHGDREVSTKELARQIGAKAVQPCKPEVANRHSGYLVG
                     GTSPFGTRKAMPVYVEASVLALPRILINGGRRGFLVGIEPRVLEEHLGARPVACALEG
                     "
     gene            834..1523
                     /locus_tag="VK150_10590"
     CDS             834..1523
                     /locus_tag="VK150_10590"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLP31801.1"
                     /translation="MSAQENGGGLRGGTVLVTGAGRGLGREVALRLSDRGFTVIAAMR
                     RPEPLQGLEVLALNVADEASVRAAAAEVKARHGHLDALVNNAGILLDGATGLMELEAD
                     VLRHTLETNAIGPLRMAQAFAPLMPKGGRIVNVSSGGGQLSAPAGWAPGYCISKTALN
                     AVTVQLSEVLKPRGIAVNSVCPGWVRTDMGGAEAPRSLEEGANSILWLLLQAGPELTG
                     GFWRDGARIPW"
     gene            complement(1525..>2241)
                     /locus_tag="VK150_10595"
     CDS             complement(1525..>2241)
                     /locus_tag="VK150_10595"
                     /inference="COORDINATES: protein motif:HMM:NF012995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arylamine N-acetyltransferase"
                     /protein_id="HLP31802.1"
                     /translation="PGLRRLHLAHATTIPFENLDIQMGLPIRLDLASLQAKLVQRRRG
                     GYCFEHNTLFQAVLRQVGFEVMACEARVRLGAQATLPRTHMLLLVTLEGATWLCDVGF
                     GGEGLLQPVPLDGEAHVQFLNTHRVAGEGPLRVLQSFHQGAWEDLYAFEPAPRFPVDF
                     DMANHYTSTYPESRFIKTLTAQLPGPEVRRILRNRAFTELRGDVAEGRELAPEDLMPT
                     LREVFGIEVPEGARFRAFEG"
BASE COUNT          327 a          771 c          812 g          331 t
ORIGIN      
        1 gacccgacgg tgttcttctc cgtcaacacg caggcggcgc aggcggactt cgcttcgcgc
       61 aacgtgctgg tgccggcctt caacctggaa aaccaggagt ccctggcccc gctgggcacc
      121 accacggcgg cgctgctgta cggcggcttc cagcagaaga aggccgccgc cggcgaccag
      181 gtgctcgcgc agtaccacgg caccctggtg ccgccgttct gcaccgccat cgcacgcggg
      241 ttcttcggcg ccgtgctggc agccgccgcg gcgcagtaaa acaggaagaa aggctcagcc
      301 ctcgagcgcg caggccaccg gccgcgcgcc gaggtgctcc tcgagcacgc gcggctcgat
      361 gcccaccagg aagccgcgcc ttcccccgtt gatcaggatc ctcggcagcg ccagcaccga
      421 ggcttccacg tacaccggca tcgccttgcg cgtgccgaag ggcgaggtgc cgcccaccag
      481 gtagccgctg tggcggttgg ccacctcggg cttgcagggc tgcacggcct tggcgccgat
      541 ctgccgggcc agttccttgg tgctcacctc gcggtcgccg tgcatgagga tgatcagcgg
      601 tgccgcacgc tcgtcttcca tcaccagcgt cttgatgacg gcgtgctcgg ccacgcccag
      661 ttcccgggca ctgaccgcgg tgccgccgtg ttcctcatag cggtagaggt gctcggtgta
      721 ggccacaccg gcctgcttga gcaaccgggt ggcgttggtg gagggagcct tggacatgtc
      781 accatgattc cacgacacgg cgggcggcga tggcccccag tgcgggaggc agcatgagcg
      841 cccaggagaa cggtggcgga cttcgcggcg gcacggtcct ggtgacgggc gcgggccggg
      901 gcctggggcg tgaggtggcc ctgcggcttt cggatcgggg gtttacggtc atcgcggcca
      961 tgcggcgccc cgagccgctc cagggtctgg aggtgctggc cctgaacgtg gcggacgagg
     1021 cgtcggtgcg cgcggcggcg gccgaagtga aggcccggca cggccacctg gacgccctgg
     1081 tgaacaatgc gggcatcctc ctggatggcg ccacaggcct gatggaactg gaagccgatg
     1141 tcctccggca cacgctggag accaacgcca tcgggcccct gcgcatggcc caggccttcg
     1201 cgcccctgat gccgaagggt ggccgcatcg tgaacgtgag cagcgggggc ggccagctct
     1261 ccgcgcccgc cggctgggcc ccgggctact gcatttcaaa gactgccctc aacgccgtca
     1321 ccgtgcagct ctccgaggtc ttgaaaccca ggggcatcgc cgtgaactcg gtgtgccccg
     1381 gctgggtgcg caccgacatg ggcggcgccg aggcgccccg cagcctggag gaaggcgcca
     1441 acagcatcct ctggctgctg ctgcaggcgg gccccgagct cacgggcggc ttctggcggg
     1501 acggcgcgcg gattccctgg tagctcagcc ttcgaaggcg cggaacctgg ccccctcggg
     1561 cacctcgatg ccgaagactt cgcgcagggt cggcatgagg tcctccggcg ccagttcccg
     1621 gccctcggcc acatcgcccc gcagctccgt gaaggcgcgg ttacgcagga tgcggcgcac
     1681 ctcgggcccc ggcagctggg ccgtgagggt cttgatgaac cgcgattccg ggtaggtgct
     1741 ggtgtagtgg ttggccatgt cgaaatccac ggggaaccgc ggcgcgggct cgaaggcgta
     1801 gagatcctcc caggcccctt ggtggaagga ctggagcacc cgcagcgggc cttctccggc
     1861 cacgcggtgg gtgttcagga actggacgtg ggcctcgccg tccagcggca ccggctgcag
     1921 cagcccctcg ccgccgaagc ccacgtcgca gagccaggtg gcgccttcca gggtcaccag
     1981 caacagcatg tgggtgcggg gcagcgtcgc ctgcgcgccg aggcgcaccc gggcttcgca
     2041 ggccatgacc tcgaagccca cctggcggag caccgcctgg aagagcgtgt tgtgctcgaa
     2101 gcagtatccg ccgcgccgcc gctgcaccag cttggcctgg agcgaagcca ggtccaggcg
     2161 gatgggcagg cccatctgga tgtcgaggtt ctcgaagggg atggtggtcg cgtgggcgag
     2221 gtgcaggcgg cgcaggcccg g
//
LOCUS       DATGWW010000735         1572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_175824, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000735 DATGWW010000000
VERSION     DATGWW010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175824"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..708)
                     /locus_tag="VK150_10600"
     CDS             complement(91..708)
                     /locus_tag="VK150_10600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLP31803.1"
                     /translation="MRPTILALALLAGISLAAQGVPMNGGLQVGGSIPTGDFADKEGP
                     SGMYLGANDGAGFHFGGHLDFNFTLHHQLRLIANVNGFASKEQDLFVGGLYQGTRQNA
                     FAVSQFGADYVYNAGSPIRGGYFLAGLNLNHVKAKADYSFGPDREITQSGRIGVRVGG
                     GYTFNRLFSLEGHFNSVAVDKDGSDGLGYDNISWLAVSAVFRFGR"
     gene            823..>1572
                     /locus_tag="VK150_10605"
     CDS             823..>1572
                     /locus_tag="VK150_10605"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HLP31804.1"
                     /translation="MDALLTSFGCFGPAAIFLIIYLFSCIKIVNEYERLVVFTLGKVE
                     EKPKGPGLCFVWRPFQTAVTVSLRTVVMDVPSQDIITRDNVSLKVSAVVYFKVLDPKA
                     AIVGVENYYYATSQMAQTTLRSILGEVTLDELLADREKLSQRLREIIDRSTEPWGIEV
                     TSVELKSVDLPEQIQRAMGKQAEAEREKRAKIIAAEGELMASQQLLEAADKISQNPTA
                     IQMRYLQTLAEISVEKNSTIVFPLPMELVKGF"
BASE COUNT          286 a          492 c          530 g          264 t
ORIGIN      
        1 gtacatgggt tcaccacgga ggcacggagg atcacaccat ctcggtgccc tcggtgtcgc
       61 cgtggtgaat ttctgccttc gcgtcgggac tcagcgcccg aagcggaaga cggcgctcac
      121 cgccagccag ctgatgttgt cgtagccaag gccgtcggag ccgtccttgt ccacggccac
      181 gctgttgaag tggccttcca ggctgaacag gcggttgaag gtgtagccgc cgccgacccg
      241 gacccctatg cgcccggact gggtgatctc ccggtccgga ccgaaggagt agtcggcctt
      301 ggccttcacg tggttgaggt tcaggccggc caggaagtag ccgccccgga tgggggaccc
      361 ggcgttgtag acgtaatcgg cgccgaactg agacacggcg aaggcgttct ggcgggtgcc
      421 ctggtagagg ccgcccacga agagatcctg ctccttgctg gcgaagccgt tgacgttggc
      481 gatgaggcgc agctggtggt ggagggtgaa gttgaaatcc aggtggccgc caaagtggaa
      541 gccggctccg tcattggcgc ccaggtacat gcctgagggg ccctccttgt cagcgaagtc
      601 ccccgtcggg atgctgcccc ccacctggag gcctccgttc atgggaacgc cctgggcggc
      661 gaggctgatg ccggccagga gggcgagggc gaggatggtc ggacgcatgg ttcctccctg
      721 atgggccggc gggtcagccg cccgcccaag gatagctgag aggtgggttg tttttccaaa
      781 gccatccggt ggcatgatgg ggcaacttcc cgaggtgctg ccatggatgc cctgctcacg
      841 tcgttcggct gtttcggtcc cgccgcgatc ttcctgatca tctacctctt cagctgcatc
      901 aagatcgtga acgagtacga gcggctggtg gtcttcaccc tcggcaaggt ggaggagaag
      961 cccaagggcc ccggcctctg cttcgtgtgg cgacccttcc agaccgcggt gaccgtgagc
     1021 ctccggaccg tggtgatgga cgtgcccagc caggacatca tcacccgcga caacgtcagc
     1081 ctgaaggtga gcgccgtcgt ctacttcaag gtgctcgatc ccaaggccgc catcgtgggc
     1141 gtggagaact actactacgc caccagccag atggcgcaga ccaccctgcg cagcatcctc
     1201 ggcgaggtca ccctggacga gctgctggct gaccgcgaga aactgagcca gcggctgcgg
     1261 gagatcatcg accggtccac cgagccctgg ggcatcgagg tcaccagcgt ggaactgaag
     1321 agcgtggacc tgcccgagca gatccagcgc gccatgggca agcaggccga ggccgagcgc
     1381 gagaagcggg cgaagatcat cgccgccgaa ggcgagctga tggccagcca gcagctgctg
     1441 gaagccgccg acaagatcag tcagaacccc acggccatcc agatgcgcta cctgcagacc
     1501 cttgcagaga tctccgtgga gaagaacagc accatcgtgt tcccgctccc catggagctg
     1561 gtgaagggct tc
//
LOCUS       DATGWW010000736         1923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_177518, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000736 DATGWW010000000
VERSION     DATGWW010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177518"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..435
                     /locus_tag="VK150_10610"
     CDS             <1..435
                     /locus_tag="VK150_10610"
                     /inference="COORDINATES: protein motif:HMM:NF014460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLP31805.1"
                     /translation="TAEIGLMKATEQLSGMEMMAVDPVQRVLTPRLLGGTLSMPLLAA
                     IFSAIGIIGAYFVGVGLLGVDEGAYWSQMQANVELQKDIMNGVIKSFVFGVVATWIAV
                     FEGYDCVPTSEGVSRATTRTVVHTSLAVLGLDFILTALMFGD"
     gene            443..916
                     /gene="mlaD"
                     /locus_tag="VK150_10615"
     CDS             443..916
                     /gene="mlaD"
                     /locus_tag="VK150_10615"
                     /inference="COORDINATES: protein motif:HMM:TIGR04430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HLP31806.1"
                     /translation="MNPRTVEIWVGVFVAAGLAALFMLAMRVSNLSAGLESGGYTVTA
                     KFQNASGLKVRSAVTMAGVTIGRVNQIAFDPKSFEAVVVMNIDKRYDNLPEDTSASIL
                     TAGLLGEKYVGLEPGGSDQPLKEGSRIELTQSSLVLENLIGQFLFNKAQEGGSTK"
     gene            913..1548
                     /locus_tag="VK150_10620"
     CDS             913..1548
                     /locus_tag="VK150_10620"
                     /inference="COORDINATES: protein motif:HMM:NF017319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLP31807.1"
                     /translation="MIRLARGFLAVVAAGLLAVAPVVQGAGPEDAQALVKGTADKVLV
                     RLKQDRAKLQAKPDLIYPLVEDLVLPHFDFEKMSQWVLGPAWRTASAEQRQRFTAEFR
                     NLLVRTYAKALLEYTDQTLNYLPVQAEAGADKVVVKTQIVQKGSSYPIGIDYAMYQKN
                     GVWKVYDLAVDNVSLVANYRKTFASDLRQGNLDQLIARLETMNKQGTEKGG"
     gene            1541..1840
                     /locus_tag="VK150_10625"
     CDS             1541..1840
                     /locus_tag="VK150_10625"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HLP31808.1"
                     /translation="MAEAIFEPVGEGRFRIRGEMTFGTVTALLTASGPMFQAPEAALE
                     VDLAGVERADSAGLALVIEWLRGARAAGKAIRFLNISPQLRAIAQVSDLEGLLPL"
BASE COUNT          339 a          626 c          616 g          342 t
ORIGIN      
        1 actgccgaga tcggcctgat gaaggcgacc gaacagctct ccggcatgga gatgatggcc
       61 gtcgacccgg tgcagcgcgt gctcacgccg cggcttctgg gcggcacgct ctcgatgccg
      121 ttgctggcgg cgatcttcag tgccatcggc atcattggcg cctatttcgt gggtgtcggc
      181 ttactggggg tcgatgaagg ggcctattgg tctcagatgc aggccaacgt ggagctccag
      241 aaagacatca tgaacggcgt gatcaaaagc ttcgtcttcg gggttgtcgc cacctggatt
      301 gccgtattcg aaggctatga ctgcgtgccc acctccgaag gcgtgagccg cgccaccacc
      361 cgcaccgtgg tgcacacctc cctggccgtg ctggggctcg atttcatcct taccgcattg
      421 atgttcggag attaagcgca tgatgaaccc ccgcaccgtc gaaatctggg ttggcgtgtt
      481 cgtggccgcg ggcctcgccg ccctgttcat gctggccatg cgcgtgagca acctgagcgc
      541 cggcctcgag agcgggggct acaccgtgac cgccaagttc cagaacgcct ccggcctcaa
      601 ggtccgttcg gcggtgacca tggccggcgt gaccatcggc cgggtcaacc agatcgcctt
      661 cgacccgaag agcttcgagg cggtggtcgt catgaacatc gacaagcgct acgacaacct
      721 ccccgaagac accagcgcca gcatcctcac cgccggtctg ctaggagaga agtatgtggg
      781 gcttgagccc ggtggttcgg accagcccct gaaagagggc agccggatcg aactcaccca
      841 gtcctcgctg gtactggaga acctcatcgg ccagttcctc ttcaacaagg cgcaggaggg
      901 aggctccacg aaatgatccg tctggcacgt ggttttcttg ccgtagtggc cgccggcctg
      961 ctggccgtcg cgcccgtggt gcagggtgcc ggcccggaag atgcgcaggc gctggtgaag
     1021 ggcaccgccg acaaggtgct ggtgcgcctg aagcaggacc gcgccaagtt gcaggccaag
     1081 cccgatctca tctacccgct ggtggaggat ctggttctgc cccatttcga cttcgagaag
     1141 atgtcccaat gggtgctcgg tcccgcctgg cgtaccgcct ccgcagagca gcgccagcgc
     1201 ttcacggcgg agttccgcaa cctgctggtg cgcacctacg ccaaggccct gctcgagtac
     1261 accgaccaga ccctcaacta cctgccggtg caggccgagg ccggcgccga caaggtggtg
     1321 gtaaagaccc agatcgtgca gaaggggagc agctacccca tcggcatcga ctacgccatg
     1381 taccagaaga acggcgtgtg gaaggtctat gacctggccg tggacaacgt gagcctggtc
     1441 gccaactacc gcaagacctt cgccagcgac ctgcgccagg gcaatctgga ccagctcatt
     1501 gcgcggctcg aaaccatgaa caaacagggg accgaaaagg gtggctgagg cgatctttga
     1561 accggtgggc gaggggcgct tccgcatccg cggggagatg accttcggca ccgtgacggc
     1621 cctgctgacg gccagcggtc ccatgttcca ggcccccgag gccgccctgg aggtggacct
     1681 cgcgggggtg gagcgggctg acagcgccgg tctcgccctg gtgatcgagt ggctgcgggg
     1741 ggcccgcgcc gcgggcaagg ccatccgctt cctcaacatc tcaccccagc tccgggccat
     1801 tgcccaggtc agcgacctgg aggggctcct tcccctctaa tcctcgggcc tcgaccctcg
     1861 atcctcggac ctcattacgg gtatcattta cggctgtttt ggcgcccatt gcgccctttc
     1921 cgg
//
LOCUS       DATGWW010000737         1599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_178283, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000737 DATGWW010000000
VERSION     DATGWW010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178283"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            75..>1599
                     /locus_tag="VK150_10630"
     CDS             75..>1599
                     /locus_tag="VK150_10630"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HLP31809.1"
                     /translation="MTTLLSPVLPPLAQTLGWTLIHFLWQGAALGLAAWIALLLLRGA
                     SARARYGAACAGLLLMVAAPVATFFLLQVQAPSGTAGLTLGVDAAVAAAGPVSLVQRA
                     KALLDPSLPWLLAGWAAGVLLLSFRFLGSWVRVQRLRRRSAVPVPAEWHLVLSRLCRE
                     LKLSRTVRLLQSAAVEVPTALGWLRPVILLPACALTGLAPLQLEAILAHELAHIRRGD
                     FLVNLIQSLVEVLLFYHPAVWWLSARIRTERELCCDDVAATLCGDPLILARALTDLEA
                     LREPHVPAPNHLAMAANGGSLMHRVRHLLHPALPVTSGARVTALALLAASLLGAAGVA
                     LQEKGATKSDKTTRIIDHDEQRKLDVRMKGDVKLNAEAPEPVVVSGDGSFRVEEKKGG
                     KTRAYAATKDKATYTVDGKEQPLDKEGKDWVRGIAKVAAKAQAGKALAERHSALAERH
                     AAVAEAQARVFEIHAHRMEEHARELEAQALELETHAEGMTPEERARVKEDLNRAKADL
                     "
BASE COUNT          226 a          618 c          535 g          220 t
ORIGIN      
        1 gccacgcgca aggccagccg cgaagagctg gccgagatcc gcaaaatgct cgatcaagcc
       61 gaagggagga agggatgacc acgctcctgt cgcccgtgct gcccccgctg gcccagaccc
      121 tgggctggac cctgatccac ttcctttggc agggcgcggc cctaggcctg gcggcctgga
      181 tcgccctcct cctgctgcgc ggcgccagcg cccgggcccg ctacggcgcc gcctgcgccg
      241 ggctgctgct catggtggcc gcccccgtgg cgaccttctt cctgctgcag gtccaggcgc
      301 cctcggggac cgcaggcctg accctcggtg tggacgccgc ggtcgccgcc gccggcccgg
      361 tgtcgctggt ccagcgggcg aaggcgctcc tggatccctc cttgccctgg ctgctggccg
      421 ggtgggccgc cggcgtgctg ctcctctcgt tccgcttcct gggcagctgg gtccgcgtgc
      481 agcgcctgcg ccgccgcagc gcggtgcccg tgcctgcgga gtggcacctg gtgctgtcgc
      541 ggctctgccg cgagctgaag ctctcgcgca ccgtgcgcct gctgcagtcc gcggcggtgg
      601 aagtgcccac ggccctcggc tggctgcgac cggtgatcct gctgccggcc tgcgccctca
      661 ccggcctggc gcccctccag ctggaggcga tcctggccca cgagctggcc cacatccggc
      721 ggggtgattt cctggtgaac ctgatccagt ccctggtgga agtgctgctg ttctaccacc
      781 ccgccgtctg gtggctgtca gcccgcatcc gcaccgagcg cgagctctgc tgcgatgacg
      841 tggccgcgac gctctgcggc gatccgctca tcctcgcccg cgccctcacg gatctcgagg
      901 cgctgcgcga gccccacgtc cccgccccca accatctggc catggccgcc aacggaggtt
      961 ccctcatgca ccgcgtccgc cacctgctgc accccgccct gcccgttacc agcggcgcgc
     1021 gggtcaccgc cctcgccctc ctcgcggcct cgctcctcgg cgccgcgggc gtggccctcc
     1081 aggagaaggg agccaccaag tccgacaaga ccacgcgcat catcgaccac gatgagcagc
     1141 gcaagctcga cgtgcggatg aagggcgacg tcaagctcaa tgcggaggcc cccgagcccg
     1201 tggtcgtctc cggggacggc agcttccgcg tcgaggagaa gaagggtggg aagacccgcg
     1261 cctacgccgc caccaaggac aaagccacct acaccgtgga tggcaaggaa cagcccctcg
     1321 acaaggaggg caaggactgg gtgcgcggca tcgcgaaggt cgcggccaag gcgcaggccg
     1381 gcaaggccct ggccgaacgc cactccgccc tggcggaacg ccacgccgcc gttgccgagg
     1441 ctcaggcccg ggtcttcgaa atccacgccc accgaatgga ggagcacgcc cgggagctgg
     1501 aagcccaggc cctcgaactg gaaacccacg ccgaaggcat gacccccgag gagcgcgccc
     1561 gcgtcaagga ggacctgaac cgcgccaagg ccgatctgg
//
LOCUS       DATGWW010000738         1525 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_179011, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000738 DATGWW010000000
VERSION     DATGWW010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179011"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..544)
                     /locus_tag="VK150_10635"
     CDS             complement(<1..544)
                     /locus_tag="VK150_10635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HLP31810.1"
                     /translation="MAPFKAALLAAYAILSLAPIVYLILTAFKLPADAIAVPPRFLPG
                     ASAPEDSYWFRFTLQNFRRVLADPGTAPYFFNSILVSAVSTVLSVAAGSLAGYGFSRF
                     PFKGGRDALFFVLCTRMLPPLALAVPISFMYSRLGLLDTRFGLILLYTCFNLSFVTWM
                     MKAFIDEIPAAYEEAAMLDGH"
     gene            complement(574..>1525)
                     /locus_tag="VK150_10640"
     CDS             complement(574..>1525)
                     /locus_tag="VK150_10640"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HLP31811.1"
                     /translation="ARGHPGQAGAGPVSAAGAMSDRAVRNLCIMPALGLLIVFNVFPL
                     LASLAVSFADYNPIIDRKPVFNGLANYAGLLDGPRQEVWRAFSRTGAFVAVSVGLETL
                     IGFGVALLLRRAFKGRGLFTAILLIPMMLSPAVMGSFWRYLFNADYGAVDWLLNARLN
                     WDGSRPLAFWAVVIAEVWMWTPFMILLSLAGLNAIPKALYEAAEVDRAGAWFRFRHIT
                     LPLAAPMVILGVVFRAMEAFRHFDSAMVLNGNLEGQPTTFVSVLLHARAFGGSRSLGE
                     PAALAYLLLIASLALASLVLRYLDHVRARRGASGFTGRRA"
BASE COUNT          307 a          490 c          549 g          179 t
ORIGIN      
        1 tatgcccgtc gagcatggcc gcctcttcgt aggccgccgg gatctcgtcg atgaaggcct
       61 tcatcatcca ggtcacgaag gagagattga agcaggtgta gagcaggatc aggccgaagc
      121 gcgtgtccag cagccccagc cggctgtaca tgaagctgat gggaaccgcc agggccagcg
      181 gggggagcat gcgggtgcac agcacgaaga agagcgcgtc gcgcccgccc ttgaagggga
      241 agcggctgaa gccgtagccg gccagggagc cggccgccac cgagaggacg gtgctgaccg
      301 ccgacaccag gatggagttg aagaaatagg gcgcggtgcc cggatcggcc agcacccggc
      361 ggaaattctg gagcgtgaag cggaaccagt acgagtcttc cggcgccgag gcgccgggca
      421 ggaaacgcgg cggcacggcg atggcgtcgg cgggaagctt gaaggcggtg aggatcaggt
      481 agacgatggg cgccaggctg aggatcgcgt aggcggccag cagggccgcc ttgaacggcg
      541 ccatcgggcc gccttccacc ggggacgggc gcttcatgcg cggcgccccg tgaaaccgct
      601 ggcgccccgg cgcgcacgca cgtgatcgag gtaacgcagg accaggctgg ccagggccag
      661 ggaggcgatc agcagcaggt aggccagggc cgcgggctcg cccagggagc ggctgccccc
      721 gaaggcgcgc gcatgcaaca gcacgctcac gaaggtggtc ggctgccctt ccaggttgcc
      781 gttcagcacc atggccgagt cgaaatgccg gaaagcctcc atggcgcgga agaccactcc
      841 gagaataacc atgggcgccg cgagcggcag ggtgatgtgg cggaagcgga accaggcccc
      901 ggcccgatcc acctcggcgg cctcgtacag ggccttgggg atggcgttga ggccggccag
      961 cgacagcagg atcatgaacg gcgtccacat ccacacctcg gcgatcacca ccgcccagaa
     1021 ggccaggggg cgcgaaccgt cccaattcag gcgcgcgttc agcagccaat ccaccgcccc
     1081 gtaatcggca ttgaacaggt aacgccagaa cgaccccatc accgccggcg aaagcatcat
     1141 ggggatgaga aggattgcgg tgaacaggcc gcggcccttg aaggcgcggc gcagcagcag
     1201 cgccaccccg aatccgatca gggtctccaa ccccaccgag acggccacga aggctcccgt
     1261 gcgcgagaag gcgcgccaca cctcctggcg cgggccgtcg aggagcccgg cgtaattggc
     1321 caggccgttg aatacgggct tccggtcgat gatgggattg taatcggcga agctcaccgc
     1381 cagcgaggcc agcaggggga acacgttgaa gacgatcaac aggcccaggg cgggcatgat
     1441 gcacaggttg cgcaccgcgc gatcggacat ggcccccgcg gcgctcaccg ggcccgcccc
     1501 cgcttggcca ggatggcctc gtgct
//
LOCUS       DATGWW010000739         1850 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_179761, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000739 DATGWW010000000
VERSION     DATGWW010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1850
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179761"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..937)
                     /locus_tag="VK150_10645"
     CDS             complement(<1..937)
                     /locus_tag="VK150_10645"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HLP31812.1"
                     /translation="MTTTRRDFLKTMGSLSLAFYMPLNVKAAPGTAPGTTPGAAFEPN
                     ALLRIEGDGTITVWATRTEIGQGVRTSMAMAIAEELEADWSRVKVLQASTAPKFGDLG
                     ITGGSQTTRSTTEAMRKVGAQAREMLLQAAADTWGVPKIECEARSSRVQHAASGRSLA
                     YGELVGKAATLTPPANPPMKAPKDFRLLGKDVRRLDGPDLVTGRAQFATDLHLPGMLV
                     ASIERCPVFGGKVKSFDAREALKVSGVKQVLQVSSGVAVFAEDTWAAFAGRQKLKVQW
                     DEGPSAKVDSATIRKQFEARLATPGKVVRQEGDAGQ"
     gene            complement(934..1407)
                     /locus_tag="VK150_10650"
     CDS             complement(934..1407)
                     /locus_tag="VK150_10650"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HLP31813.1"
                     /translation="MAVFTLSVNGQSHKVEADADMPLLWVLRDRLQLTGTKFGCGQGL
                     CGACTVHLGGAPVRACKTRLGDVGARPVTTIEGLDPQGAHPLQKAWLELDVSQCGYCQ
                     TGQIMKAAALLTANPRPSDADIDQAMGRNVCRCGTYLRIREAIHRAAGKKAEVTP"
BASE COUNT          242 a          636 c          663 g          309 t
ORIGIN      
        1 cctgccccgc atccccctcc tggcgcacca ccttgccagg cgtggccagg cgggcctcga
       61 actgcttgcg gatggtggcg ctgtcgacct tcgccgaggg gccttcatcc cactggacct
      121 tcaacttctg gcgcccggcg aaggcggccc aggtgtcttc ggcgaagacc gccacgccgc
      181 tggacacctg caggacctgc ttcacgccgg agaccttgag ggcctcccgg gcatcgaagg
      241 atttcacctt cccgccgaag accgggcagc gctcgatgct ggccacgagc atgccgggca
      301 ggtggaggtc cgtggcgaac tgggcccggc ccgtgaccag gtccggcccg tccaggcgcc
      361 gcacgtcctt gccgagaagg cggaagtcct tcggggcctt catgggcggg ttcgcgggcg
      421 gcgtcagggt cgcggccttg ccgacgagct ccccgtaggc gaggctccgg ccgctggcgg
      481 catgctgcac gcggcttgag cgggcctcgc attcgatctt gggaacgccc caggtgtcgg
      541 ccgcagcctg caggagcatc tcccgggcct gggcgcccac cttccgcatg gcttccgtgg
      601 tgctgcgggt ggtctggctg ccgccggtga taccgaggtc gccgaatttc ggggcggtgg
      661 aggcctgcag gaccttcacg cgggaccagt ccgcctcgag ctcttcagcg atggccatgg
      721 ccatgctggt gcgcaccccc tggccgattt ccgtccgcgt ggcccagacg gtgatggtcc
      781 cgtcgccctc gatgcgaagc agggcgttgg gctcgaaggc ggcgcccggc gtggtgcccg
      841 gtgcggtgcc gggcgcggcc ttcacgttca ggggcatgta gaaggccagg gacaggctgc
      901 ccatggtctt gaggaagtcg cggcgggtgg tggtcatggc gtcacctccg ccttctttcc
      961 ggcggcccgg tggatggcct cgcggatccg caggtaggtg ccgcagcggc acacgttccg
     1021 gcccatggcc tggtcgatgt cggcgtccga gggtctgggg ttggcggtca ggagcgcggc
     1081 ggccttcatg atctggcccg tctggcagta gccgcactgg gatacgtcca gctcaagcca
     1141 ggccttctgc aggggatggg cgccctgggg atcgaggccc tcgatggtgg tgacgggccg
     1201 ggcgcccacg tcgcccaggc gggtcttgca ggcgcggacg ggggcaccgc ccaggtggac
     1261 ggtgcaggcg ccgcagagcc cctggccgca cccgaacttc gttcccgtga gctgaagacg
     1321 gtcgcgcagc acccagagca ggggcatgtc agcgtccgcc tccaccttgt gggattgccc
     1381 gttgaccgac agggtgaaca ccgccatggg gcacctccgg ttgcaggatg atgggcccca
     1441 tcctacaacc gctgtgagga cagtggtgca ataagaaaaa ccagatctgt ccgcccgcta
     1501 aaggcgccct tcagatccgc ttcccgctgg ccgccttcga cctgggcccc gggcccggcc
     1561 ggattcaccc ggacgccgca gtccacggtg caggtgatcg cgtggaccct gagccggccc
     1621 ctgatgctgg catccctctc gcccttcttc cgggttgtgt cgggagtttg tcgtgctgcg
     1681 acggttgctg ttgtccctcg gattgttggc aggcctgggt ctcggggccc agggggccga
     1741 ccggcccgtg ccgccgccca cctcctccga gaaggaactg caggctccct tgacgctgga
     1801 ggacggaaaa ccgacgcccg ggcaggcccc cgaggcggcc ccttccgggc
//
LOCUS       DATGWW010000740         1689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_180601, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000740 DATGWW010000000
VERSION     DATGWW010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180601"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..860
                     /locus_tag="VK150_10655"
     CDS             <1..860
                     /locus_tag="VK150_10655"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLP31814.1"
                     /translation="LGVMGVLPDGAPQWSEPDQHQLLEAFANQTALALERAILAEQGH
                     ADRRRADEERLRNALLSSVSHDLRTPLGVITGAVSTALETPDLPESTRRDLLTTAQEE
                     AQRLHRLVSNLLDITRLESGTLDLQTEWIPVEELIGAVLNRRELGPDAARVRTLLPDA
                     PPLVSMDPVLMEQVLLNLLDNAMKYSPAGSPVDIKVWTTQHTVTISVTDQGPGIAEGE
                     ADRIFEKLARGEAAASRPGAGLGLAICRGIVTAHGGRIQAVNHPQGGAQFLVTLPLGA
                     PPSLPEEGS"
     gene            857..1552
                     /locus_tag="VK150_10660"
     CDS             857..1552
                     /locus_tag="VK150_10660"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLP31815.1"
                     /translation="MTAPAPLVLLIEDEPQMRRFLRVALEGGGYRYLEAATAREGLEQ
                     VAQHQPQVILLDLGLPDLDGLEVLARLREWSQIPVIVISARGQEADKVKALDLGADDY
                     LTKPFGTSELLARVRVALRHADPAAQSDPVFLLDRWRVDLAKRQVWVSGEEIHLTPLE
                     YKLFTTLIRHAGKVVTHRQLLKEVWGGIAAAQPLYLRVYMTQLRHKLEVDPSRPAYLQ
                     TEPGVGYRLRTDD"
BASE COUNT          291 a          578 c          553 g          267 t
ORIGIN      
        1 ccctgggcgt gatgggggtc ctgcccgatg gtgcgcccca gtggagcgag ccggatcagc
       61 accagctgct ggaagccttc gccaaccaga ccgccctggc cctggagcgg gcgattctgg
      121 ccgaacaggg gcatgcggac cgacggcgcg ccgacgaaga gcgcctgcgg aatgcgctgc
      181 tcagctccgt ctcccacgac ctgcgaacac ccctcggcgt catcacgggc gccgtcagca
      241 ccgccctgga gacccccgac ctgccggaaa gcacccgccg ggacctgctg accacggccc
      301 aggaggaggc ccaacggctg caccggctgg tcagcaacct gctcgacatc acccgcctgg
      361 aatccgggac gctcgacctc cagacggagt ggatcccagt ggaggagttg atcggggccg
      421 tgctcaaccg gcgggagctg ggtcctgatg ccgcccgcgt caggacgctc ctgcctgacg
      481 ccccgccgct cgtatccatg gacccggtgc tcatggagca ggtgctcctg aacctgctgg
      541 acaacgccat gaagtattcc cctgccgggt cacccgtgga catcaaggtc tggacgaccc
      601 agcacaccgt caccatctcg gtgacggacc aggggccagg cattgccgaa ggcgaagcgg
      661 atcggatctt cgagaagctt gcccggggcg aagccgccgc cagccgcccc ggcgctggtc
      721 tcgggctggc catctgcaga ggcatcgtga cggcccatgg aggacgcatc caggcggtca
      781 accaccctca aggcggggcc cagttcctgg tcaccttgcc cctgggagcg cccccatccc
      841 tgccggagga aggttcatga cggctccggc tccgcttgtc ctgctcatcg aggacgaacc
      901 ccagatgcgg cggttcctcc gggtcgcgct tgagggcggt ggctaccgtt accttgaagc
      961 agctaccgca agggaggggc ttgagcaggt ggctcagcac cagccccagg tcattctgct
     1021 ggacctcggc ctgccagacc tggatggact ggaggtcctg gcccgcctgc gggagtggag
     1081 ccagatcccc gtgatcgtga tttccgcccg gggccaggag gccgacaagg tgaaggccct
     1141 ggacctgggc gcggacgact acctcaccaa accgttcggc accagcgaac tgctggccag
     1201 ggtccgggtg gccttgcgtc atgccgaccc ggccgcccag tccgatccgg tgttcctcct
     1261 ggaccgctgg cgcgtcgacc tggccaagcg ccaggtatgg gtctcgggag aagagatcca
     1321 cttgacgccc ttggaataca agctcttcac caccctgatc cgccacgcgg gcaaggtggt
     1381 cacccaccgg cagctgctga aggaggtctg gggcggcatc gctgcggccc aaccgcttta
     1441 cctgcgcgtc tacatgaccc agctgcggca caaactggaa gtcgatccgt ctcggccggc
     1501 ctatctccag actgaaccgg gcgtcgggta tcgtctgcgg accgacgact aggagtcgaa
     1561 catccctggc agggtcgcgg gatgtctgat tacaaatgca cgttcattcg ccatctgaga
     1621 ggctggtccc aggatcatcg ggtggggagg actgtgaaat cgaggacatt ccatcggcgt
     1681 cgcctctgg
//
LOCUS       DATGWW010000741         1895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U10592 k141_181067, whole
            genome shotgun sequence.
ACCESSION   DATGWW010000741 DATGWW010000000
VERSION     DATGWW010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957362
            Sequence Read Archive: SRR5823600
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 1895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 21:18:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,135
            CDSs (total)                      :: 2,114
            Genes (coding)                    :: 2,111
            CDSs (with protein)               :: 2,111
            Genes (RNA)                       :: 21
            tRNAs                             :: 20
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 1 of 3
            Pseudo Genes (internal stop)      :: 2 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181067"
                     /isolate="SMAG_U10592"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..862
                     /locus_tag="VK150_10665"
     CDS             <1..862
                     /locus_tag="VK150_10665"
                     /inference="COORDINATES: protein motif:HMM:NF015148.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="OPT/YSL family transporter"
                     /protein_id="HLP31816.1"
                     /translation="MVIAFFFAPVAARAIATIGTNPISGMTMLTLVITGGLMLKLHFS
                     GGYGMFLTMMVGGIVCTALAASGAFSTDLKIGHWIGATPARQIAWKFVGTFVAALFTG
                     LAMWLLANQKLPDGAYAIGTNALPAPQASAMKAILEGIFGTVSMPLRWYAFGLGIMLS
                     IVLRMVELPALGFALGMYLPIELNTPLFLGGLMAHWVNRPKKGTSEADAKARENRGVL
                     IASGLMAGGAIMGVIAAAIKAKDAWREGFPVLSAQAAEGALGEWVGLGALVALCLYVV
                     VYSRRAKGEA"
     gene            1038..1667
                     /locus_tag="VK150_10670"
     CDS             1038..1667
                     /locus_tag="VK150_10670"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HLP31817.1"
                     /translation="MCPATEAVLMEGELSSLPDAPLSGPDQAIRRLRAGDREAFADLM
                     GLTEARVLALAWRILGDRHLAEDAAQETYLRAFRSLDHFRLGEPFEAWLIRIAVNVCR
                     DLGRKRGQQPVALASLDGLEAGATAPGAEEAVLLDQRRALVRQALATLPQGERVALVL
                     RDLEGLTSEEAARILGLRPATVRSQVASARAKVQAHCARRLAAPKGGRP"
     gene            1664..>1895
                     /locus_tag="VK150_10675"
     CDS             1664..>1895
                     /locus_tag="VK150_10675"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HLP31818.1"
                     /translation="MTPPHVLDQLPLWVEGDLTAPELEAVERHLAACPACREAADHLR
                     QSQAWLREALASPFEPADHARLRAAVMARLATA"
BASE COUNT          261 a          713 c          632 g          289 t
ORIGIN      
        1 catggtcatc gccttcttct tcgcgccggt ggccgcccgg gccatcgcca ccatcggcac
       61 caatcccatc agcggcatga ccatgctcac cctggtgatc acgggcggct tgatgttgaa
      121 gctgcatttc agcggcggct acggcatgtt cctcaccatg atggtgggcg gcatcgtctg
      181 cacggcgctc gcggcgtcgg gcgccttcag caccgacctc aagatcggcc actggatcgg
      241 cgccaccccc gcccgccaga tcgcctggaa gttcgtgggc accttcgtgg ccgcgctgtt
      301 caccggcctg gccatgtggc tgctggccaa ccagaaactg ccggacggcg cctatgccat
      361 cggcaccaac gccctgcccg cgccccaggc cagcgccatg aaggccatcc tcgagggcat
      421 cttcggcacc gtctccatgc ccctgcgctg gtacgccttc ggactgggca tcatgctctc
      481 catcgtgctg cgcatggtgg aactgcccgc cctgggcttc gccctgggca tgtacctgcc
      541 catcgagctg aacacgcccc tcttcctggg cggcctcatg gcccattggg tgaaccggcc
      601 caagaagggc acctcggagg ccgacgccaa ggcccgggag aaccgcggcg tcctcatcgc
      661 cagcggcctc atggcgggcg gcgccatcat gggggtcatc gcggcggcca tcaaggccaa
      721 ggacgcctgg cgggagggct tcccggtcct gagcgcccag gcggcggaag gggccctggg
      781 cgagtgggtc ggcctcggcg cgctggtggc cttgtgcctc tacgtggtcg tctacagccg
      841 ccgggccaag ggcgaggcgt aggcaaaata catctcaacc gcagatgacg cagatggacg
      901 cagatgaaaa gccaggccgt ggcctcatct gcgtcatctg cggttaaatg ttccttcatc
      961 ttttccagac cccctgaatt tcgaatcaac gctaggcccg ttcgcccggt atggatgggt
     1021 gagggaggga tcgtggcgtg tgtccggcga ccgaggctgt gctgatggaa ggggagctgt
     1081 cttccctgcc cgacgcgccg ctctcggggc cggaccaggc catccggcgc ctccgggcgg
     1141 gggaccggga agccttcgcc gacctgatgg gcctcaccga ggcccgcgtc ctggccctgg
     1201 cctggcggat cctcggcgac cgccacctgg ccgaggacgc cgcccaggag acctacctcc
     1261 gcgccttccg ctctctggac catttccggc tgggcgaacc cttcgaggcc tggctgatcc
     1321 gcatcgccgt gaacgtctgc cgcgacctgg gccggaaacg gggccagcag cccgtggcgc
     1381 tggcctccct ggacggcctg gaggccggag ccacggcccc aggggccgag gaggccgtcc
     1441 tcctcgacca gcgccgcgcc ctggtccgcc aggccctggc gaccctcccc cagggcgagc
     1501 gggtcgccct ggtcctgcgg gatctggagg gcctcacctc cgaggaggcc gcccggatcc
     1561 tgggcctgcg ccccgccacc gtgcgctccc aggtggcctc cgcccgcgcc aaggtgcagg
     1621 cccactgcgc gcgccgcctg gccgcgccga aaggaggccg cccatgaccc ctccccatgt
     1681 cctcgaccag ctgcccctct gggtcgaagg ggacctcacg gcgcccgagc tggaggccgt
     1741 cgagcggcac ctcgcggcct gccccgcctg ccgggaagcg gccgaccatc tgcgccagag
     1801 ccaggcctgg ctgcgggagg ccctggcctc gcccttcgag cccgcagacc acgcccggct
     1861 gcgggcagcg gtgatggcgc gcctcgccac cgccc
//
